F185358

General Info

Members Datasets Scaffolds Average Seq Length
142 123 137 290

Family's Representative Sequence

Representative Sequence 3300006175|Ga0070712_100375813|Ga0070712_1003758131
Length 328
Sequence LWLFQPWRSDITDITAAGVFSLGNRTVNRLGYGAMQLAGPGVFGPPKDRHTALAVLREAVVRGVNHIDTSDYYGPHVTNQLIREALHPYPDDLVIVTKVGAVRGADASWIPALTPADLTRAVHDNLRNLRVDALDLVNLRVGGISEPNESSIEEPFASLAELQQQGLIRQLGLSNVTSGQLKQANSIAKVVCVQNHYNLVHRDDDALIDELAGSGIAYVPFFPLGGFTPLQSSTLSEVATRLGATSMQVALAWLLHRAPNILLIPGTSSIAHLHENLAAAELALTDTTLTELGTEKAFSELPMNALGMAAYTRRSTTTTLIVRAQGLL

Samples

Sample ID Description Type Environment
1 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
2 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
3 2838054893 Variovorax guangxiensis 34/80 Isolate Nodule
4 2842698319 Methylobacterium sp. R-72139 Isolate Unclassified
5 2894817345 Aureimonas psammosilenae YIM DR1026 Isolate Unclassified
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
10 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
16 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
17 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
28 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
38 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
39 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
45 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
46 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
67 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
69 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
70 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
71 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
72 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
73 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
74 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
75 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
76 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
77 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
78 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
79 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
80 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
81 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
82 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
83 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
84 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
85 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
86 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
87 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
88 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
89 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
90 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
91 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
92 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
93 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
94 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
95 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
96 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
97 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
98 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
99 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
100 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
101 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
102 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
103 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
104 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
110 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
111 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
112 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
114 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
115 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
116 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
117 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
118 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
119 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
120 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
121 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
122 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
123 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.77
Metatranscriptomes 0.7
Isolates 3.52

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.93
Nodule 0.7
Rhizoplane 6.34
Rhizosphere 80.28
Stem 0
Stem Tuber 0
Unclassified 7.75

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065715_10103730 3300005293 Bacteria 3012
2 Ga0070687_100100600 3300005343 Bacteria 1618
3 Ga0070709_10112898 3300005434 Bacteria 1829
4 Ga0070705_100006587 3300005440 Bacteria 5703
5 Ga0070694_100003361 3300005444 Bacteria 9583
6 Ga0070707_100539931 3300005468 Bacteria 1128
7 Ga0070698_100054461 3300005471 Bacteria 4060
8 Ga0070699_100085554 3300005518 Bacteria 2751
9 Ga0068853_100000654 3300005539 Bacteria 23772
10 Ga0070696_100118192 3300005546 Bacteria 1916
11 Ga0070693_100048216 3300005547 Bacteria 2426
12 Ga0070704_100052252 3300005549 Bacteria 2882
13 Ga0068855_100046821 3300005563 Bacteria 5111
14 Ga0070664_100071596 3300005564 Bacteria 2971
15 Ga0068857_100000972 3300005577 Bacteria 21925
16 Ga0068856_100005321 3300005614 Bacteria 12705
17 Ga0068864_100004842 3300005618 Bacteria 11031
18 Ga0068858_100000338 3300005842 Bacteria 49699
19 Ga0068860_100018422 3300005843 Bacteria 6792
20 Ga0070715_10044472 3300006163 Bacteria 1878
21 Ga0070712_100375813 3300006175 Bacteria 1169
22 Ga0070712_100516068 3300006175 Bacteria 1003
23 Ga0075369_10070682 3300006186 Bacteria 1536
24 Ga0068871_100044931 3300006358 Bacteria 3553
25 Ga0075433_10110178 3300006852 Bacteria 2442
26 Ga0075434_100127312 3300006871 Bacteria 2564
27 Ga0075434_100287699 3300006871 Bacteria 1663
28 Ga0075436_100063954 3300006914 Bacteria 2543
29 Ga0105240_10003782 3300009093 Bacteria 23379
30 Ga0105240_10006251 3300009093 Bacteria 17519
31 Ga0105240_10209571 3300009093 Bacteria 2278
32 Ga0105240_10446819 3300009093 Bacteria 1448
33 Ga0111539_10080978 3300009094 Bacteria 3819
34 Ga0114129_10110627 3300009147 Bacteria 3792
35 Ga0114129_10124397 3300009147 Bacteria 3547
36 Ga0105248_10007052 3300009177 Bacteria 12310
37 Ga0105249_10238655 3300009553 Bacteria 1796
38 Ga0099796_10065196 3300010159 Bacteria 1301
39 Ga0157373_10001711 3300013100 Bacteria 16683
40 Ga0157370_10019019 3300013104 Bacteria 6905
41 Ga0157369_10044859 3300013105 Bacteria 4810
42 Ga0163162_10006556 3300013306 Bacteria 11277
43 Ga0157372_10299709 3300013307 Bacteria 1870
44 Ga0163163_10412916 3300014325 Bacteria 1409
45 Ga0157379_10068683 3300014968 Bacteria 3168
46 Ga0213876_10045083 3300021384 Bacteria 2332
47 Ga0209677_101659 3300025253 Bacteria 9357
48 Ga0207697_10018439 3300025315 Bacteria 2862
49 Ga0207685_10038325 3300025905 Bacteria 1771
50 Ga0207699_10097324 3300025906 Bacteria 1860
51 Ga0207654_10076460 3300025911 Bacteria 2004
52 Ga0207695_10001430 3300025913 Bacteria 40141
53 Ga0207695_10071690 3300025913 Bacteria 3538
54 Ga0207695_10133758 3300025913 Bacteria 2435
55 Ga0207671_10005576 3300025914 Bacteria 11557
56 Ga0207693_10057487 3300025915 Bacteria 3048
57 Ga0207693_10183314 3300025915 Bacteria 1648
58 Ga0207660_10220915 3300025917 Bacteria 1487
59 Ga0207700_10124661 3300025928 Bacteria 2094
60 Ga0207686_10020898 3300025934 Bacteria 3747
61 Ga0207711_10012156 3300025941 Bacteria 7156
62 Ga0207667_10053267 3300025949 Bacteria 4258
63 Ga0207668_10368006 3300025972 Bacteria 1206
64 Ga0207703_10000376 3300026035 Bacteria 47694
65 Ga0207703_10044850 3300026035 Bacteria 3555
66 Ga0207639_10046139 3300026041 Bacteria 3286
67 Ga0207702_10006760 3300026078 Bacteria 9842
68 Ga0207676_10000930 3300026095 Bacteria 22649
69 Ga0207674_10000365 3300026116 Bacteria 58777
70 Ga0207675_100159944 3300026118 Bacteria 2148
71 Ga0207428_10056995 3300027907 Bacteria 3103
72 Ga0268264_10439096 3300028381 Bacteria 1262
73 Ga0265760_10057057 3300031090 Bacteria 1182
74 Ga0265330_10060025 3300031235 Bacteria 1656
75 Ga0265340_10168775 3300031247 Bacteria 992
76 Ga0307513_10403833 3300031456 Bacteria 1100
77 Ga0307413_10094424 3300031824 Bacteria 1958
78 Ga0307413_10140758 3300031824 Bacteria 1667
79 Ga0307510_10000462 3300033180 Bacteria 39513
80 Ga0307510_10030206 3300033180 Bacteria 6147
81 Ga0373932_0006829 3300035112 Bacteria 2709
82 Ga0373953_0105490 3300035117 Bacteria 1189
83 Ga0395901_0007535 3300038443 Bacteria 10993
84 Ga0395901_0398489 3300038443 Bacteria 1414
85 Ga0436365_1286269 3300039437 Bacteria 2735
86 Ga0436361_0244311 3300039447 Bacteria 59058
87 Ga0439459_0009764 3300042438 Bacteria 1662
88 Ga0466958_0001977 3300045836 Bacteria 10077
89 Ga0495590_0010485 3300046457 Bacteria 3482
90 Ga0495638_0000685 3300046460 Bacteria 36856
91 Ga0495664_0022563 3300046477 Bacteria 3650
92 Ga0495584_0013007 3300046491 Bacteria 4247
93 Ga0495594_0080880 3300046499 Bacteria 1814
94 Ga0495628_0166690 3300046516 Bacteria 1672
95 Ga0495630_0175222 3300046517 Bacteria 1635
96 Ga0495663_0078450 3300046525 Bacteria 1061
97 Ga0495657_0035741 3300046675 Bacteria 3441
98 Ga0495670_0256912 3300046691 Bacteria 932
99 Ga0495674_0030157 3300047319 Bacteria 4934
100 Ga0495675_0150092 3300047444 Bacteria 1440
101 Ga0495684_0008008 3300047471 Bacteria 8170
102 Ga0496104_0323782 3300048907 Bacteria 1454
103 Ga0496106_0043419 3300048909 Bacteria 3373
104 Ga0496108_0000008 3300048911 Bacteria 294619
105 Ga0496108_0183473 3300048911 Bacteria 1812
106 Ga0496109_0325587 3300048912 Bacteria 1450
107 Ga0496111_0052652 3300048914 Bacteria 2940
108 Ga0496112_0091062 3300048915 Bacteria 3018
109 Ga0496113_0105167 3300048916 Bacteria 2191
110 Ga0496115_0347710 3300048918 Bacteria 1210
111 Ga0496124_0008746 3300048927 Bacteria 10519
112 Ga0496126_0347025 3300048929 Bacteria 1215
113 Ga0501032_0040524 3300049569 Bacteria 3166
114 Ga0501034_0398178 3300049571 Bacteria 1300
115 Ga0501037_0078932 3300049573 Bacteria 2389
116 Ga0501046_0168929 3300049580 Bacteria 1642
117 Ga0501047_0000850 3300049581 Bacteria 31408
118 Ga0501069_0077091 3300049585 Bacteria 1875
119 Ga0501074_0281811 3300049590 Bacteria 1181
120 Ga0501249_000579 3300049679 Bacteria 8654
121 Ga0501035_0000238 3300049822 Bacteria 65886
122 Ga0501044_0002163 3300049823 Bacteria 22528
123 Ga0501044_0098526 3300049823 Bacteria 2943
124 nmdc:mga05p37_177169_c1 3300050507 Bacteria 2597
125 nmdc:mga05p37_514419_c1 3300050507 Bacteria 1371
126 nmdc:mga05p37_56291_c1 3300050507 Bacteria 4413
127 nmdc:mga05p37_780911_c1 3300050507 Bacteria 1048
128 nmdc:mga08y16_260225_c1 3300050511 Bacteria 1792
129 nmdc:mga0n895_61883_c1 3300050512 Bacteria 3697
130 nmdc:mga0rr50_379068_c1 3300050513 Bacteria 1192
131 nmdc:mga08x19_21716_c1 3300050514 Bacteria 3966
132 nmdc:mga0a205_254428_c1 3300050515 Bacteria 1635
133 Ga0500583_0195585 3300053092 Bacteria 1006
134 Ga0500568_0014734 3300053139 Bacteria 3520
135 Ga0500604_0046772 3300053151 Bacteria 1325
136 Ga0500616_0002357 3300053153 Bacteria 15880
137 Ga0500616_0021158 3300053153 Bacteria 3651

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300006852 Ga0075433_10110178 Ga0075433_101101781 262
2 3300050511 nmdc:mga08y16_260225_c1 nmdc:mga08y16_260225_c1_229_1029 262
3 3300050507 nmdc:mga05p37_514419_c1 nmdc:mga05p37_514419_c1_480_1301 263
4 3300035112 Ga0373932_0006829 Ga0373932_0006829_1005_1811 264
5 3300048918 Ga0496115_0347710 Ga0496115_0347710_37_852 267
6 3300009093 Ga0105240_10006251 Ga0105240_1000625115 268
7 3300013100 Ga0157373_10001711 Ga0157373_1000171116 268
8 3300025915 Ga0207693_10057487 Ga0207693_100574872 268
9 3300038443 Ga0395901_0398489 Ga0395901_0398489_525_1355 268
10 3300039447 Ga0436361_0244311 Ga0436361_0244311_28582_29418 268
11 3300046517 Ga0495630_0175222 Ga0495630_0175222_213_1031 268
12 3300050514 nmdc:mga08x19_21716_c1 nmdc:mga08x19_21716_c1_1336_2157 268
13 3300005468 Ga0070707_100539931 Ga0070707_1005399311 271
14 3300050513 nmdc:mga0rr50_379068_c1 nmdc:mga0rr50_379068_c1_260_1087 271
15 3300048912 Ga0496109_0325587 Ga0496109_0325587_599_1438 275
16 iso_pu_bacteria 2643221587 2643947008 275
17 iso_pu_bacteria 2643221677 2644433520 275
18 3300031090 Ga0265760_10057057 Ga0265760_100570572 276
19 3300048909 Ga0496106_0043419 Ga0496106_0043419_138_989 276
20 3300009093 Ga0105240_10209571 Ga0105240_102095712 277
21 3300048911 Ga0496108_0000008 Ga0496108_0000008_287149_288018 277
22 3300005843 Ga0068860_100018422 Ga0068860_1000184223 278
23 3300014968 Ga0157379_10068683 Ga0157379_100686832 278
24 3300025972 Ga0207668_10368006 Ga0207668_103680062 278
25 3300026035 Ga0207703_10044850 Ga0207703_100448503 278
26 3300028381 Ga0268264_10439096 Ga0268264_104390962 278
27 3300021384 Ga0213876_10045083 Ga0213876_100450832 279
28 3300039437 Ga0436365_1286269 Ga0436365_1286269_354_1235 279
29 3300033180 Ga0307510_10030206 Ga0307510_100302065 281
30 3300035117 Ga0373953_0105490 Ga0373953_0105490_235_1092 281
31 3300046675 Ga0495657_0035741 Ga0495657_0035741_1423_2280 281
32 3300038443 Ga0395901_0007535 Ga0395901_0007535_126_986 282
33 3300046491 Ga0495584_0013007 Ga0495584_0013007_119_1045 282
34 3300046525 Ga0495663_0078450 Ga0495663_0078450_156_1028 282
35 iso_pu_bacteria 2842698319 2842699000 282
36 3300005618 Ga0068864_100004842 Ga0068864_1000048422 283
37 3300005842 Ga0068858_100000338 Ga0068858_10000033844 283
38 3300009177 Ga0105248_10007052 Ga0105248_100070523 283
39 3300009553 Ga0105249_10238655 Ga0105249_102386552 283
40 3300013306 Ga0163162_10006556 Ga0163162_100065562 283
41 3300025315 Ga0207697_10018439 Ga0207697_100184392 283
42 3300025941 Ga0207711_10012156 Ga0207711_100121565 283
43 3300026035 Ga0207703_10000376 Ga0207703_1000037641 283
44 3300026095 Ga0207676_10000930 Ga0207676_100009301 283
45 3300026118 Ga0207675_100159944 Ga0207675_1001599442 283
46 3300053151 Ga0500604_0046772 Ga0500604_0046772_31_921 283
47 iso_pu_bacteria 2894817345 2894821359 283
48 3300009093 Ga0105240_10003782 Ga0105240_100037825 284
49 3300025913 Ga0207695_10001430 Ga0207695_1000143032 284
50 3300031824 Ga0307413_10140758 Ga0307413_101407582 284
51 3300049573 Ga0501037_0078932 Ga0501037_0078932_139_1005 284
52 3300005434 Ga0070709_10112898 Ga0070709_101128982 285
53 3300005539 Ga0068853_100000654 Ga0068853_10000065411 285
54 3300005547 Ga0070693_100048216 Ga0070693_1000482163 285
55 3300005563 Ga0068855_100046821 Ga0068855_1000468213 285
56 3300005564 Ga0070664_100071596 Ga0070664_1000715963 285
57 3300005577 Ga0068857_100000972 Ga0068857_10000097227 285
58 3300005614 Ga0068856_100005321 Ga0068856_10000532111 285
59 3300006914 Ga0075436_100063954 Ga0075436_1000639542 285
60 3300013104 Ga0157370_10019019 Ga0157370_100190193 285
61 3300013105 Ga0157369_10044859 Ga0157369_100448595 285
62 3300013307 Ga0157372_10299709 Ga0157372_102997092 285
63 3300014325 Ga0163163_10412916 Ga0163163_104129162 285
64 3300025906 Ga0207699_10097324 Ga0207699_100973242 285
65 3300025911 Ga0207654_10076460 Ga0207654_100764602 285
66 3300025913 Ga0207695_10071690 Ga0207695_100716903 285
67 3300025914 Ga0207671_10005576 Ga0207671_100055769 285
68 3300025917 Ga0207660_10220915 Ga0207660_102209151 285
69 3300025949 Ga0207667_10053267 Ga0207667_100532672 285
70 3300026041 Ga0207639_10046139 Ga0207639_100461393 285
71 3300026078 Ga0207702_10006760 Ga0207702_1000676010 285
72 3300026116 Ga0207674_10000365 Ga0207674_1000036529 285
73 3300031824 Ga0307413_10094424 Ga0307413_100944242 285
74 iso_pu_bacteria 2838054893 2838061452 285
75 3300006175 Ga0070712_100516068 Ga0070712_1005160681 286
76 3300025915 Ga0207693_10183314 Ga0207693_101833142 286
77 3300025928 Ga0207700_10124661 Ga0207700_101246612 286
78 3300048907 Ga0496104_0323782 Ga0496104_0323782_394_1311 286
79 3300048911 Ga0496108_0183473 Ga0496108_0183473_251_1168 286
80 3300048914 Ga0496111_0052652 Ga0496111_0052652_599_1516 286
81 3300048915 Ga0496112_0091062 Ga0496112_0091062_1503_2420 286
82 3300048929 Ga0496126_0347025 Ga0496126_0347025_86_958 286
83 3300050515 nmdc:mga0a205_254428_c1 nmdc:mga0a205_254428_c1_30_947 286
84 3300005343 Ga0070687_100100600 Ga0070687_1001006002 287
85 3300006163 Ga0070715_10044472 Ga0070715_100444722 287
86 3300006175 Ga0070712_100375813 Ga0070712_1003758131 287
87 3300006186 Ga0075369_10070682 Ga0075369_100706822 287
88 3300006358 Ga0068871_100044931 Ga0068871_1000449312 287
89 3300006871 Ga0075434_100127312 Ga0075434_1001273122 287
90 3300009093 Ga0105240_10446819 Ga0105240_104468192 287
91 3300010159 Ga0099796_10065196 Ga0099796_100651962 287
92 3300025905 Ga0207685_10038325 Ga0207685_100383252 287
93 3300025934 Ga0207686_10020898 Ga0207686_100208982 287
94 3300031235 Ga0265330_10060025 Ga0265330_100600252 287
95 3300031247 Ga0265340_10168775 Ga0265340_101687751 287
96 3300031456 Ga0307513_10403833 Ga0307513_104038331 287
97 3300046460 Ga0495638_0000685 Ga0495638_0000685_6649_7524 287
98 3300046477 Ga0495664_0022563 Ga0495664_0022563_2741_3637 287
99 3300046516 Ga0495628_0166690 Ga0495628_0166690_294_1190 287
100 3300046691 Ga0495670_0256912 Ga0495670_0256912_33_908 287
101 3300047319 Ga0495674_0030157 Ga0495674_0030157_3778_4674 287
102 3300047444 Ga0495675_0150092 Ga0495675_0150092_482_1378 287
103 3300047471 Ga0495684_0008008 Ga0495684_0008008_378_1274 287
104 3300048916 Ga0496113_0105167 Ga0496113_0105167_49_945 287
105 3300049679 Ga0501249_000579 Ga0501249_000579_5162_6040 287
106 3300050512 nmdc:mga0n895_61883_c1 nmdc:mga0n895_61883_c1_1856_2731 287
107 3300053092 Ga0500583_0195585 Ga0500583_0195585_38_937 287
108 3300053139 Ga0500568_0014734 Ga0500568_0014734_799_1674 287
109 3300053153 Ga0500616_0002357 Ga0500616_0002357_10791_11666 287
110 3300053153 Ga0500616_0021158 Ga0500616_0021158_559_1434 287
111 3300005293 Ga0065715_10103730 Ga0065715_101037303 288
112 3300005440 Ga0070705_100006587 Ga0070705_1000065872 288
113 3300005444 Ga0070694_100003361 Ga0070694_1000033616 288
114 3300005471 Ga0070698_100054461 Ga0070698_1000544614 288
115 3300005518 Ga0070699_100085554 Ga0070699_1000855543 288
116 3300005546 Ga0070696_100118192 Ga0070696_1001181922 288
117 3300005549 Ga0070704_100052252 Ga0070704_1000522523 288
118 3300006871 Ga0075434_100287699 Ga0075434_1002876992 288
119 3300009094 Ga0111539_10080978 Ga0111539_100809782 288
120 3300009147 Ga0114129_10110627 Ga0114129_101106272 288
121 3300009147 Ga0114129_10124397 Ga0114129_101243975 288
122 3300025253 Ga0209677_101659 Ga0209677_1016594 288
123 3300025913 Ga0207695_10133758 Ga0207695_101337583 288
124 3300027907 Ga0207428_10056995 Ga0207428_100569954 288
125 3300033180 Ga0307510_10000462 Ga0307510_100004626 288
126 3300042438 Ga0439459_0009764 Ga0439459_0009764_282_1184 288
127 3300045836 Ga0466958_0001977 Ga0466958_0001977_6871_7752 288
128 3300046457 Ga0495590_0010485 Ga0495590_0010485_126_1079 288
129 3300046499 Ga0495594_0080880 Ga0495594_0080880_653_1573 288
130 3300048927 Ga0496124_0008746 Ga0496124_0008746_9424_10365 288
131 3300049569 Ga0501032_0040524 Ga0501032_0040524_1205_2086 288
132 3300049571 Ga0501034_0398178 Ga0501034_0398178_98_976 288
133 3300049580 Ga0501046_0168929 Ga0501046_0168929_181_1062 288
134 3300049581 Ga0501047_0000850 Ga0501047_0000850_7875_8756 288
135 3300049585 Ga0501069_0077091 Ga0501069_0077091_72_950 288
136 3300049590 Ga0501074_0281811 Ga0501074_0281811_168_1046 288
137 3300049822 Ga0501035_0000238 Ga0501035_0000238_42375_43256 288
138 3300049823 Ga0501044_0002163 Ga0501044_0002163_14568_15449 288
139 3300049823 Ga0501044_0098526 Ga0501044_0098526_975_1853 288
140 3300050507 nmdc:mga05p37_177169_c1 nmdc:mga05p37_177169_c1_253_1122 288
141 3300050507 nmdc:mga05p37_56291_c1 nmdc:mga05p37_56291_c1_2855_3721 288
142 3300050507 nmdc:mga05p37_780911_c1 nmdc:mga05p37_780911_c1_30_896 288

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00248

Aldo_ket_red

Aldo/keto reductase family

29

294

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
8hnq-assembly1.cif.gz_A the structure of a alcohol dehydrogenase akr13b2 with nadp 0.918 4 279
8hnq-assembly1.cif.gz_A the structure of a alcohol dehydrogenase akr13b2 with nadp 0.8808 4 279
4xap-assembly1.cif.gz_A crystal structure of aldo-keto reductase from sinorhizobium meliloti 1021 0.8671 9 279
3v0u-assembly1.cif.gz_A crystal structure of perakine reductase, founder member of a novel akr subfamily with unique conformational changes during nadph binding 0.8587 9 282
6cia-assembly1.cif.gz_A crystal structure of aldo-keto reductase from klebsiella pneumoniae in complex with nadph. 0.8568 9 279
ID Description Score Start End Superfamily
af_P25906_7_286_3.20.20.100 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.9738 11 282 3.20.20.100
af_P25906_7_286_3.20.20.100 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.9431 11 282 3.20.20.100
af_O94315_19_306_3.20.20.100 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.9252 11 280 3.20.20.100
af_F4HPY8_8_325_3.20.20.100 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.8845 9 282 3.20.20.100
af_P77256_1_325_3.20.20.100 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.8686 9 280 3.20.20.100
ID Description Score Start End GO Terms
AF-A0A840K117-F1-model_v4 deleted 0.9732 2 282
AF-A0A3N2QZW5-F1-model_v4 Aldo/keto reductase family oxidoreductase 0.9724 1 283 GO:0004033
GO:0005737
AF-A0A0K4T6T7-F1-model_v4 deleted 0.9705 53 282
AF-A0A0Q8NZJ9-F1-model_v4 Oxidoreductase 0.9704 1 282 GO:0004033
GO:0005737
AF-A0A530C167-F1-model_v4 Oxidoreductase 0.9704 1 185 GO:0004033
GO:0005737

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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