F186546

General Info

Members Datasets Scaffolds Average Seq Length
142 120 109 298

Family's Representative Sequence

Representative Sequence 3300044658|Ga0466972_0005345|Ga0466972_0005345_3382_4425
Length 347
Sequence VKLVTRAQRFALNRVSLAPFVRYPERDWNEMQRESANHERPQAHAMMRPARLAVGVVSAGRVGSVLGAALARAGHTVVAASGLSAASLARAERLLPDVPLLPPDETVRRADLVLLAIPDDALAGTVRGLAATGSLRAGQIVVHTSGAHGIDVLAPAAELGALPLALHPVMTFTGREEDLERLAACSIGVTAATDDEAAWNVGEALTVEMGAEPVRVPDSARALYHAALTHGANHLMTLVADCAEVLRDAGIGQSERLVAPLLSAALDNVLRHGDRALTGPVARGDVGTVRKHLAVLADRAPDVTPAYRALARRTVARSLAAGVLQDTAAAKDLTELLDDSAEGHQDQ

Samples

Sample ID Description Type Environment
1 2558860280 Kutzneria sp. 744 Isolate Unclassified
2 2582580736 Prauserella sp. Am3 Isolate Unclassified
3 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
4 2643221679 Angustibacter sp. Root456 Isolate Unclassified
5 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
6 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
7 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
8 2751185725 Microbispora sp. NRRL B-24597 Isolate Unclassified
9 2751185792 Kitasatospora arboriphila NRRL B-24581 Isolate Unclassified
10 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
11 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
12 2775506925 Saccharopolyspora phatthalungensis NRRL B-24798 Isolate Rhizosphere
13 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
14 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
15 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
16 2808606394 Promicromonospora sp. C35 Isolate Unclassified
17 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
18 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
19 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
20 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
21 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
22 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
23 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
24 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
25 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
26 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
27 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
28 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
30 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
31 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
32 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
33 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
34 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
35 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
36 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
37 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
40 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
41 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
42 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
47 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
52 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
53 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
65 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
66 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
67 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
68 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
69 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
70 3300030734 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 5 Metagenome Rhizosphere
71 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
72 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
73 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
74 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
75 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
76 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
77 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
78 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
79 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
80 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
81 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
82 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
83 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
84 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
85 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
86 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
87 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
88 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
89 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
90 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
91 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
92 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
93 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
94 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
95 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
96 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
97 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
98 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
99 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
100 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
101 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
102 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
103 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
104 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
105 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
106 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
107 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
108 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
109 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
110 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
111 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
112 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
113 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
114 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
115 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
116 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
117 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere
118 8056054917 Glycomyces luteolus NEAU-A15 Isolate Rhizosphere
119 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere
120 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 76.76
Metatranscriptomes 0
Isolates 23.24

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.7
Nodule 0
Rhizoplane 3.52
Rhizosphere 61.27
Stem 0
Stem Tuber 0.7
Unclassified 33.8

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10002461 3300003203 Bacteria 8752
2 rootL2_10159756 3300003322 Bacteria 1438
3 Ga0070682_100036069 3300005337 Bacteria 3021
4 Ga0070668_100005265 3300005347 Bacteria 9598
5 Ga0070674_100151375 3300005356 Bacteria 1751
6 Ga0070688_100272467 3300005365 Bacteria 1213
7 Ga0070714_100490030 3300005435 Bacteria 1171
8 Ga0070710_10000345 3300005437 Bacteria 22087
9 Ga0070663_100004226 3300005455 Bacteria 8403
10 Ga0068853_100086457 3300005539 Bacteria 2750
11 Ga0068855_100289583 3300005563 Bacteria 1816
12 Ga0068854_100484743 3300005578 Bacteria 1039
13 Ga0068852_100289474 3300005616 Bacteria 1582
14 Ga0068864_100250231 3300005618 Bacteria 1645
15 Ga0068870_10228132 3300005840 Bacteria 1143
16 Ga0068863_100276524 3300005841 Bacteria 1626
17 Ga0081455_10000143 3300005937 Bacteria 84594
18 Ga0081539_10000027 3300005985 Bacteria 328691
19 Ga0070717_10103178 3300006028 Bacteria 2424
20 Ga0070712_100266341 3300006175 Bacteria 1375
21 Ga0075434_100579735 3300006871 Bacteria 1141
22 Ga0163163_10333924 3300014325 Bacteria 1571
23 Ga0157379_10001395 3300014968 Bacteria 19784
24 Ga0213876_10065142 3300021384 Bacteria 1923
25 Ga0213875_10000123 3300021388 Bacteria 86889
26 Ga0213875_10061049 3300021388 Bacteria 1762
27 Ga0207692_10002338 3300025898 Bacteria 7279
28 Ga0207643_10051322 3300025908 Bacteria 2341
29 Ga0207662_10157199 3300025918 Bacteria 1450
30 Ga0207664_10003588 3300025929 Bacteria 10377
31 Ga0207664_10263916 3300025929 Bacteria 1507
32 Ga0207669_10121710 3300025937 Bacteria 1773
33 Ga0207668_10165026 3300025972 Bacteria 1730
34 Ga0207678_10003469 3300026067 Bacteria 14194
35 Ga0207678_10042684 3300026067 Bacteria 3927
36 Ga0207641_10055452 3300026088 Bacteria 3365
37 Ga0207674_10361729 3300026116 Bacteria 1403
38 Ga0207675_100716227 3300026118 Bacteria 1010
39 Ga0207698_10411439 3300026142 Bacteria 1295
40 Ga0265336_10031618 3300028666 Bacteria 1644
41 Ga0307511_10000582 3300030521 Bacteria 39111
42 Ga0307512_10002391 3300030522 Bacteria 23860
43 Ga0316177_1167838 3300030731 Bacteria 3376
44 Ga0316176_1226934 3300030732 Bacteria 1577
45 Ga0314311_1177723 3300030733 Bacteria 3887
46 Ga0316179_1075742 3300030734 Bacteria 2495
47 Ga0307513_10000002 3300031456 Bacteria 842612
48 Ga0307513_10002723 3300031456 Bacteria 24327
49 Ga0307513_10136671 3300031456 Bacteria 2386
50 Ga0307516_10234273 3300031730 Bacteria 1538
51 Ga0307518_10002383 3300031838 Bacteria 13720
52 Ga0307518_10125242 3300031838 Bacteria 1813
53 Ga0307411_10006721 3300032005 Bacteria 5782
54 Ga0307507_10032466 3300033179 Bacteria 5447
55 Ga0307507_10063281 3300033179 Bacteria 3426
56 Ga0307510_10023094 3300033180 Bacteria 7214
57 Ga0373956_0000445 3300035119 Bacteria 16853
58 Ga0436364_0661798 3300037853 Bacteria 86818
59 Ga0436364_1374805 3300037853 Bacteria 13693
60 Ga0436365_0045804 3300039437 Bacteria 2273
61 Ga0436365_1347107 3300039437 Bacteria 2365
62 Ga0436362_0380707 3300039453 Bacteria 30204
63 Ga0439439_0005230 3300041406 Bacteria 2957
64 Ga0439457_002512 3300042014 Bacteria 5223
65 Ga0450907_006406 3300042146 Bacteria 1966
66 Ga0466969_0010105 3300044656 Bacteria 5007
67 Ga0466972_0005345 3300044658 Bacteria 6432
68 Ga0466965_0012114 3300044683 Bacteria 4050
69 Ga0466965_0027290 3300044683 Bacteria 2771
70 Ga0466965_0193007 3300044683 Bacteria 1078
71 Ga0466966_0000310 3300044684 Bacteria 31446
72 Ga0466966_0012977 3300044684 Bacteria 5517
73 Ga0466961_0001956 3300044693 Bacteria 12837
74 Ga0466961_0151204 3300044693 Bacteria 1449
75 Ga0466963_0000575 3300044694 Bacteria 17393
76 Ga0466963_0165019 3300044694 Bacteria 1543
77 Ga0466968_0017709 3300044735 Bacteria 2851
78 Ga0466970_0004275 3300044765 Bacteria 7033
79 Ga0466970_0008992 3300044765 Bacteria 5038
80 Ga0466970_0014379 3300044765 Bacteria 4064
81 Ga0466970_0067270 3300044765 Bacteria 1924
82 Ga0466957_0001325 3300044842 Bacteria 12932
83 Ga0466957_0211657 3300044842 Bacteria 1277
84 Ga0466960_0008019 3300044901 Bacteria 4310
85 Ga0466960_0022012 3300044901 Bacteria 2845
86 Ga0466960_0052212 3300044901 Bacteria 1977
87 Ga0466959_0025676 3300045049 Bacteria 4368
88 Ga0466958_0000800 3300045836 Bacteria 13882
89 Ga0466967_0028880 3300045976 Bacteria 4636
90 Ga0466967_0426855 3300045976 Bacteria 1293
91 Ga0466967_0429167 3300045976 Bacteria 1289
92 Ga0495627_019801 3300046453 Bacteria 2251
93 Ga0496100_0021613 3300048903 Bacteria 3879
94 Ga0496101_0041260 3300048904 Bacteria 3290
95 Ga0496102_0000155 3300048905 Bacteria 92990
96 Ga0496103_0000202 3300048906 Bacteria 59622
97 Ga0496107_0104618 3300048910 Bacteria 2077
98 Ga0496116_0000539 3300048919 Bacteria 50894
99 Ga0496117_0000747 3300048920 Bacteria 51180
100 Ga0496118_0000265 3300048921 Bacteria 91869
101 Ga0496119_0000456 3300048922 Bacteria 56083
102 Ga0496120_0010695 3300048923 Bacteria 6370
103 Ga0496124_0028260 3300048927 Bacteria 5020
104 Ga0496125_0041169 3300048928 Bacteria 3953
105 Ga0496126_0000381 3300048929 Bacteria 91810
106 nmdc:mga06r32_25282_c1 3300050510 Bacteria 2478
107 nmdc:mga08y16_115958_c1 3300050511 Bacteria 2788
108 Ga0495619_0022798 3300053085 Bacteria 4010
109 Ga0500559_0008266 3300053136 Bacteria 4577

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300041406 Ga0439439_0005230 Ga0439439_0005230_677_1576 272
2 3300042014 Ga0439457_002512 Ga0439457_002512_2410_3309 272
3 3300044735 Ga0466968_0017709 Ga0466968_0017709_14_838 274
4 3300006175 Ga0070712_100266341 Ga0070712_1002663412 275
5 3300030734 Ga0316179_1075742 Ga0316179_10757423 275
6 3300031456 Ga0307513_10000002 Ga0307513_10000002177 277
7 3300044765 Ga0466970_0008992 Ga0466970_0008992_1440_2366 280
8 3300044842 Ga0466957_0211657 Ga0466957_0211657_319_1245 280
9 3300044684 Ga0466966_0000310 Ga0466966_0000310_8397_9248 283
10 3300044693 Ga0466961_0151204 Ga0466961_0151204_363_1214 283
11 3300044694 Ga0466963_0000575 Ga0466963_0000575_7511_8362 283
12 3300044842 Ga0466957_0001325 Ga0466957_0001325_6056_6907 283
13 3300045049 Ga0466959_0025676 Ga0466959_0025676_114_965 283
14 3300045836 Ga0466958_0000800 Ga0466958_0000800_4785_5636 283
15 3300005618 Ga0068864_100250231 Ga0068864_1002502311 285
16 3300005841 Ga0068863_100276524 Ga0068863_1002765241 285
17 3300014968 Ga0157379_10001395 Ga0157379_100013959 285
18 3300025972 Ga0207668_10165026 Ga0207668_101650261 285
19 3300026088 Ga0207641_10055452 Ga0207641_100554524 285
20 3300045976 Ga0466967_0426855 Ga0466967_0426855_53_910 285
21 3300048903 Ga0496100_0021613 Ga0496100_0021613_2771_3700 285
22 3300048905 Ga0496102_0000155 Ga0496102_0000155_41203_42132 285
23 3300048906 Ga0496103_0000202 Ga0496103_0000202_17512_18441 285
24 3300048910 Ga0496107_0104618 Ga0496107_0104618_1038_1967 285
25 3300048919 Ga0496116_0000539 Ga0496116_0000539_242_1171 285
26 3300048920 Ga0496117_0000747 Ga0496117_0000747_556_1485 285
27 3300048921 Ga0496118_0000265 Ga0496118_0000265_49724_50653 285
28 3300048922 Ga0496119_0000456 Ga0496119_0000456_41118_42047 285
29 3300048923 Ga0496120_0010695 Ga0496120_0010695_5179_6108 285
30 3300048927 Ga0496124_0028260 Ga0496124_0028260_438_1367 285
31 3300048928 Ga0496125_0041169 Ga0496125_0041169_2584_3513 285
32 3300048929 Ga0496126_0000381 Ga0496126_0000381_41158_42087 285
33 3300035119 Ga0373956_0000445 Ga0373956_0000445_3324_4235 287
34 iso_pu_bacteria 2751185725 2753038521 288
35 iso_pu_bacteria 2751185792 2753327014 288
36 3300030732 Ga0316176_1226934 Ga0316176_12269342 289
37 3300031730 Ga0307516_10234273 Ga0307516_102342732 289
38 3300042146 Ga0450907_006406 Ga0450907_006406_827_1729 289
39 3300044765 Ga0466970_0014379 Ga0466970_0014379_797_1729 289
40 iso_pu_bacteria 8056054917 8056056471 289
41 3300032005 Ga0307411_10006721 Ga0307411_100067215 290
42 3300053136 Ga0500559_0008266 Ga0500559_0008266_2930_3805 291
43 iso_pu_bacteria 8047710418 8047714053 291
44 iso_pu_bacteria 2795385472 2795793813 292
45 iso_pu_bacteria 2866612099 2866612522 292
46 3300005435 Ga0070714_100490030 Ga0070714_1004900301 293
47 3300005437 Ga0070710_10000345 Ga0070710_1000034512 293
48 3300021384 Ga0213876_10065142 Ga0213876_100651422 293
49 3300021388 Ga0213875_10000123 Ga0213875_1000012351 293
50 3300021388 Ga0213875_10061049 Ga0213875_100610492 293
51 3300025898 Ga0207692_10002338 Ga0207692_100023383 293
52 3300025929 Ga0207664_10263916 Ga0207664_102639162 293
53 3300030731 Ga0316177_1167838 Ga0316177_11678384 293
54 3300030733 Ga0314311_1177723 Ga0314311_11777232 293
55 3300037853 Ga0436364_0661798 Ga0436364_0661798_48098_48982 293
56 3300037853 Ga0436364_1374805 Ga0436364_1374805_7165_8049 293
57 3300039437 Ga0436365_0045804 Ga0436365_0045804_14_898 293
58 3300039437 Ga0436365_1347107 Ga0436365_1347107_634_1518 293
59 3300039453 Ga0436362_0380707 Ga0436362_0380707_29012_29896 293
60 3300044683 Ga0466965_0027290 Ga0466965_0027290_1097_1987 293
61 3300044901 Ga0466960_0008019 Ga0466960_0008019_2117_3007 293
62 3300045976 Ga0466967_0028880 Ga0466967_0028880_1355_2281 293
63 iso_pu_bacteria 2558860280 2559427589 293
64 iso_pu_bacteria 2816332139 2816505977 293
65 iso_pu_bacteria 2870721527 2870728563 293
66 iso_pu_bacteria 2899370129 2899374686 293
67 3300005337 Ga0070682_100036069 Ga0070682_1000360692 294
68 3300005578 Ga0068854_100484743 Ga0068854_1004847431 294
69 3300005840 Ga0068870_10228132 Ga0068870_102281321 294
70 3300014325 Ga0163163_10333924 Ga0163163_103339242 294
71 3300025908 Ga0207643_10051322 Ga0207643_100513222 294
72 3300025918 Ga0207662_10157199 Ga0207662_101571991 294
73 3300026067 Ga0207678_10042684 Ga0207678_100426842 294
74 3300026116 Ga0207674_10361729 Ga0207674_103617292 294
75 3300026118 Ga0207675_100716227 Ga0207675_1007162271 294
76 3300028666 Ga0265336_10031618 Ga0265336_100316182 294
77 3300044683 Ga0466965_0012114 Ga0466965_0012114_2070_2972 294
78 3300044694 Ga0466963_0165019 Ga0466963_0165019_519_1421 294
79 3300045976 Ga0466967_0429167 Ga0466967_0429167_139_1041 294
80 3300050511 nmdc:mga08y16_115958_c1 nmdc:mga08y16_115958_c1_975_1865 294
81 3300053085 Ga0495619_0022798 Ga0495619_0022798_1649_2545 294
82 iso_pu_bacteria 2582580736 2583151988 294
83 iso_pu_bacteria 2585427649 2586065121 294
84 iso_pu_bacteria 2791354901 2791916855 294
85 iso_pu_bacteria 2795385470 2795780382 294
86 iso_pu_bacteria 2808606522 2809593518 294
87 iso_pu_bacteria 2870782633 2870787911 294
88 iso_pu_bacteria 2891326441 2891328451 294
89 iso_pu_bacteria 2899359706 2899362245 294
90 iso_pu_bacteria 2917736166 2917739097 294
91 iso_pu_bacteria 8003314358 8003319929 294
92 3300006871 Ga0075434_100579735 Ga0075434_1005797351 295
93 3300031456 Ga0307513_10002723 Ga0307513_1000272326 295
94 3300033179 Ga0307507_10032466 Ga0307507_100324666 295
95 3300046453 Ga0495627_019801 Ga0495627_019801_983_1957 295
96 3300048904 Ga0496101_0041260 Ga0496101_0041260_22_930 295
97 iso_pu_bacteria 2643221679 2644445790 295
98 iso_pu_bacteria 2738541272 2738694872 295
99 iso_pu_bacteria 2738543027 2739325784 295
100 iso_pu_bacteria 2739367654 2739608477 295
101 iso_pu_bacteria 2758568522 2760305830 295
102 iso_pu_bacteria 2758568621 2760625656 295
103 iso_pu_bacteria 2808606394 2809030691 295
104 iso_pu_bacteria 2932431166 2932434738 295
105 iso_pu_bacteria 8056579771 8056584734 295
106 3300006028 Ga0070717_10103178 Ga0070717_101031783 296
107 3300025929 Ga0207664_10003588 Ga0207664_100035888 296
108 3300031838 Ga0307518_10125242 Ga0307518_101252422 296
109 3300044901 Ga0466960_0022012 Ga0466960_0022012_614_1504 296
110 3300050510 nmdc:mga06r32_25282_c1 nmdc:mga06r32_25282_c1_1405_2328 296
111 iso_pu_bacteria 2775506925 2776375207 296
112 iso_pu_bacteria 2863067949 2863069469 296
113 iso_pu_bacteria 8054472261 8054473688 296
114 iso_pu_bacteria 8056207758 8056209709 296
115 3300005356 Ga0070674_100151375 Ga0070674_1001513751 297
116 3300005539 Ga0068853_100086457 Ga0068853_1000864572 297
117 3300005563 Ga0068855_100289583 Ga0068855_1002895832 297
118 3300005616 Ga0068852_100289474 Ga0068852_1002894742 297
119 3300005937 Ga0081455_10000143 Ga0081455_1000014310 297
120 3300025937 Ga0207669_10121710 Ga0207669_101217102 297
121 3300026142 Ga0207698_10411439 Ga0207698_104114392 297
122 3300030521 Ga0307511_10000582 Ga0307511_1000058240 297
123 3300031456 Ga0307513_10136671 Ga0307513_101366712 297
124 3300033180 Ga0307510_10023094 Ga0307510_100230944 297
125 3300044656 Ga0466969_0010105 Ga0466969_0010105_1530_2423 297
126 3300044684 Ga0466966_0012977 Ga0466966_0012977_2539_3432 297
127 3300044693 Ga0466961_0001956 Ga0466961_0001956_11157_12050 297
128 3300044765 Ga0466970_0004275 Ga0466970_0004275_2228_3121 297
129 3300003203 JGI25406J46586_10002461 JGI25406J46586_100024612 298
130 3300003322 rootL2_10159756 rootL2_101597562 298
131 3300005347 Ga0070668_100005265 Ga0070668_1000052656 298
132 3300005365 Ga0070688_100272467 Ga0070688_1002724672 298
133 3300005455 Ga0070663_100004226 Ga0070663_1000042268 298
134 3300005985 Ga0081539_10000027 Ga0081539_10000027199 298
135 3300026067 Ga0207678_10003469 Ga0207678_1000346912 298
136 3300030522 Ga0307512_10002391 Ga0307512_1000239112 298
137 3300031838 Ga0307518_10002383 Ga0307518_1000238312 298
138 3300033179 Ga0307507_10063281 Ga0307507_100632813 298
139 3300044658 Ga0466972_0005345 Ga0466972_0005345_3382_4425 298
140 3300044683 Ga0466965_0193007 Ga0466965_0193007_20_925 298
141 3300044765 Ga0466970_0067270 Ga0466970_0067270_753_1796 298
142 3300044901 Ga0466960_0052212 Ga0466960_0052212_381_1424 298

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10727

Rossmann-like

Rossmann-like domain

38

168

0.98

PF10728

DUF2520

Domain of unknown function (DUF2520)

185

314

0.94

PF03807

F420_oxidored

NADP oxidoreductase coenzyme F420-dependent

53

147

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
3d1l-assembly1.cif.gz_B crystal structure of putative nadp oxidoreductase bf3122 from bacteroides fragilis 0.8364 6 271
3d1l-assembly1.cif.gz_B crystal structure of putative nadp oxidoreductase bf3122 from bacteroides fragilis 0.8217 6 271
2i76-assembly1.cif.gz_B crystal structure of protein tm1727 from thermotoga maritima 0.7941 11 274
2i76-assembly1.cif.gz_B crystal structure of protein tm1727 from thermotoga maritima 0.7882 11 274
3dfu-assembly1.cif.gz_B crystal structure of a putative rossmann-like dehydrogenase (cgl2689) from corynebacterium glutamicum at 2.07 a resolution 0.774 1 278
ID Description Score Start End Superfamily
af_O06279_7_172_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9904 3 169 3.40.50.720
af_O06279_7_172_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9786 3 169 3.40.50.720
2i76B02 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;ProC-like, C-terminal domain 0.8611 178 274 1.10.1040.20
2i76B02 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;ProC-like, C-terminal domain 0.8217 178 274 1.10.1040.20
3dfuB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8211 3 171 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2S9FDB0-F1-model_v4 DUF2520 domain-containing protein 0.9951 3 110
AF-A0A7J9XXE8-F1-model_v4 Oxidoreductase 0.9885 2 123
AF-B4VE85-F1-model_v4 deleted 0.9865 184 291
AF-A0A4D4L0J5-F1-model_v4 Oxidoreductase 0.9804 2 212
AF-A0A4S2STY3-F1-model_v4 DUF2520 domain-containing protein 0.9786 2 292

Feature Viewer

pLDDT pTM Quality
94.86 0.86 High
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Predicted Structure (AlphaFold2)

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