F186969

General Info

Members Datasets Scaffolds Average Seq Length
142 86 142 426

Family's Representative Sequence

Representative Sequence 3300049581|Ga0501047_0100190|Ga0501047_0100190_1179_2753
Length 524
Sequence MDGHRGDPALAGCDRGEDGGAFGAITEAVGRVLDVAAGEDFSRPGEHRGADPEPGIWRVRLPAGGTGRLFKAAEKRCGQGRAHGILRGCIVRRLAFVSKPNPMANRFYNAFDSETQGGGRKPDYRSAFQIDRDRIIHAHAFRKLQSKTQVFLSGEYDFYRTRLTHSMEVAQIGRSICHFLRTQARPLAEDFYIDADLVEGVCLAHDLGHPPFGHSGERTLQELMLKWGGFEGNAQTLHLLTETIYENEAGVRGMQPSRALLDGVLKYKKLFREFPVPPRNHFLYDPQESVRAFVFDGAAIPAELHEGEKLNGLKSVECQIMDWADDAAYSLNDIVDGVKAGFLTIERIEAWAAGEAIDAERLRLLDQLFTAIRGDRLENVISMKIGGFITACRLRERDNFMAARTNRYRFELVVAPEAEREAAFFKKLANDIIFESPQLQQMEHKARRVLFQLWESCWRNYVEKEARVINILPPRVGRLIDAEATHAGKARQICDWLAGLTDGMIVRTYRRLFDPEFGSIRDLS

Samples

Sample ID Description Type Environment
1 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
11 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
12 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
13 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
14 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
15 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
16 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
17 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
28 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
29 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
30 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
31 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
32 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
33 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
34 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
35 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
36 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
37 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
38 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
39 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
40 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
41 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
42 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
43 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
44 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
45 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
46 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
47 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
48 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
49 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
50 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
51 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
52 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
53 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
54 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
55 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
56 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
57 3300042130 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 Metagenome Rhizosphere
58 3300042144 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 Metagenome Rhizosphere
59 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
60 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
61 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
62 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
63 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
64 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
65 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
66 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
67 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
68 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
70 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
77 3300049650 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_A_0_drought Metagenome Rhizosphere
78 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
79 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
80 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
81 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
82 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
84 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
85 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
86 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.41
Nodule 0
Rhizoplane 0
Rhizosphere 96.48
Stem 0
Stem Tuber 0
Unclassified 2.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24744J21845_10002231 3300002077 Bacteria 3940
2 rootH2_10019649 3300003320 Bacteria 16960
3 Ga0070658_10008558 3300005327 Bacteria 8227
4 Ga0070683_100005308 3300005329 Bacteria 10738
5 Ga0068869_100000377 3300005334 Bacteria 24161
6 Ga0068868_100052631 3300005338 Bacteria 3205
7 Ga0070661_100000995 3300005344 Bacteria 20118
8 Ga0070661_100048809 3300005344 Bacteria 3099
9 Ga0068867_100000472 3300005459 Bacteria 26720
10 Ga0068867_100005809 3300005459 Bacteria 8757
11 Ga0070679_100109532 3300005530 Bacteria 2748
12 Ga0070664_100151434 3300005564 Bacteria 2048
13 Ga0068871_100001291 3300006358 Bacteria 16743
14 Ga0068865_100007171 3300006881 Bacteria 6846
15 Ga0105243_10000718 3300009148 Bacteria 31800
16 Ga0157373_10000384 3300013100 Bacteria 35453
17 Ga0163163_10023694 3300014325 Bacteria 5830
18 Ga0157376_10007251 3300014969 Bacteria 7895
19 Ga0207705_10016920 3300025909 Bacteria 5223
20 Ga0207649_10003428 3300025920 Bacteria 8670
21 Ga0207652_10069204 3300025921 Bacteria 3064
22 Ga0207709_10002524 3300025935 Bacteria 11414
23 Ga0207704_10002747 3300025938 Bacteria 7943
24 Ga0207689_10000903 3300025942 Bacteria 28512
25 Ga0207661_10017920 3300025944 Bacteria 5252
26 Ga0207679_10000645 3300025945 Bacteria 23267
27 Ga0207677_10049604 3300026023 Bacteria 2834
28 Ga0207648_10001380 3300026089 Bacteria 26758
29 Ga0207648_10010424 3300026089 Bacteria 8808
30 Ga0265337_1003436 3300028556 Bacteria 6867
31 Ga0265319_1000008 3300028563 Bacteria 215029
32 Ga0265319_1003543 3300028563 Bacteria 8102
33 Ga0265319_1020499 3300028563 Bacteria 2448
34 Ga0265319_1031751 3300028563 Bacteria 1836
35 Ga0265334_10004478 3300028573 Bacteria 6197
36 Ga0265318_10000216 3300028577 Bacteria 49980
37 Ga0265318_10000954 3300028577 Bacteria 18596
38 Ga0265318_10001017 3300028577 Bacteria 17921
39 Ga0265318_10001567 3300028577 Bacteria 13282
40 Ga0265318_10030925 3300028577 Bacteria 2080
41 Ga0265323_10000181 3300028653 Bacteria 37901
42 Ga0265323_10001424 3300028653 Bacteria 11766
43 Ga0265323_10004749 3300028653 Bacteria 5824
44 Ga0265322_10000800 3300028654 Bacteria 11312
45 Ga0265322_10002192 3300028654 Bacteria 6065
46 Ga0265336_10013070 3300028666 Bacteria 2776
47 Ga0307515_10101163 3300028794 Bacteria 3482
48 Ga0265338_10003623 3300028800 Bacteria 21531
49 Ga0265338_10004487 3300028800 Bacteria 18820
50 Ga0265338_10013726 3300028800 Bacteria 9109
51 Ga0265324_10004387 3300029957 Bacteria 6399
52 Ga0265324_10012626 3300029957 Bacteria 3179
53 Ga0265330_10070729 3300031235 Bacteria 1510
54 Ga0265332_10043959 3300031238 Bacteria 1928
55 Ga0265328_10049639 3300031239 Bacteria 1541
56 Ga0265320_10000548 3300031240 Bacteria 28940
57 Ga0265320_10003621 3300031240 Bacteria 10318
58 Ga0265320_10005228 3300031240 Bacteria 8371
59 Ga0265320_10006580 3300031240 Bacteria 7305
60 Ga0265320_10022677 3300031240 Bacteria 3354
61 Ga0265320_10023332 3300031240 Bacteria 3294
62 Ga0265320_10027790 3300031240 Bacteria 2945
63 Ga0265331_10009764 3300031250 Bacteria 5359
64 Ga0265327_10000016 3300031251 Bacteria 467439
65 Ga0265327_10001859 3300031251 Bacteria 24481
66 Ga0265327_10003507 3300031251 Bacteria 14895
67 Ga0265327_10003751 3300031251 Bacteria 14125
68 Ga0265327_10004311 3300031251 Bacteria 12688
69 Ga0265316_10021472 3300031344 Bacteria 5466
70 Ga0265316_10028659 3300031344 Bacteria 4590
71 Ga0265316_10048224 3300031344 Bacteria 3364
72 Ga0265316_10103769 3300031344 Bacteria 2158
73 Ga0265316_10141546 3300031344 Bacteria 1806
74 Ga0307408_100000003 3300031548 Bacteria 618438
75 Ga0307408_100050734 3300031548 Bacteria 2985
76 Ga0265313_10005140 3300031595 Bacteria 9741
77 Ga0265313_10005309 3300031595 Bacteria 9530
78 Ga0265313_10009547 3300031595 Bacteria 6280
79 Ga0265313_10013446 3300031595 Bacteria 4911
80 Ga0307508_10003998 3300031616 Bacteria 14608
81 Ga0265314_10001028 3300031711 Bacteria 32548
82 Ga0265314_10002501 3300031711 Bacteria 18759
83 Ga0265314_10004133 3300031711 Bacteria 13666
84 Ga0265314_10005420 3300031711 Bacteria 11526
85 Ga0265342_10003694 3300031712 Bacteria 12411
86 Ga0265342_10011519 3300031712 Bacteria 6047
87 Ga0265342_10037712 3300031712 Bacteria 2946
88 Ga0265342_10038015 3300031712 Bacteria 2933
89 Ga0307410_10000039 3300031852 Bacteria 46194
90 Ga0307406_10000464 3300031901 Bacteria 23488
91 Ga0307407_10000117 3300031903 Bacteria 25598
92 Ga0307407_10078269 3300031903 Bacteria 1991
93 Ga0307412_10000037 3300031911 Bacteria 192170
94 Ga0307412_10102523 3300031911 Bacteria 2026
95 Ga0307409_100000018 3300031995 Bacteria 57233
96 Ga0307416_100000027 3300032002 Bacteria 172418
97 Ga0307416_100000781 3300032002 Bacteria 16737
98 Ga0307414_10000007 3300032004 Bacteria 407977
99 Ga0395905_0000036 3300037471 Bacteria 271733
100 Ga0450892_000046 3300042130 Bacteria 13007
101 Ga0450889_003373 3300042144 Bacteria 1575
102 Ga0450893_0007712 3300042532 Bacteria 1750
103 Ga0451577_0000024 3300042876 Bacteria 411758
104 Ga0451577_0001658 3300042876 Bacteria 28771
105 Ga0451577_0042280 3300042876 Bacteria 4088
106 Ga0453683_0006331 3300044673 Bacteria 8131
107 Ga0466966_0041930 3300044684 Bacteria 2940
108 Ga0453684_0007933 3300044712 Bacteria 19257
109 Ga0453684_0043547 3300044712 Bacteria 6031
110 Ga0453684_0067534 3300044712 Bacteria 4546
111 Ga0451576_0000730 3300045051 Bacteria 65921
112 Ga0451576_0006301 3300045051 Bacteria 14598
113 Ga0451576_0148963 3300045051 Bacteria 2441
114 Ga0501031_0016826 3300049568 Bacteria 4748
115 Ga0501032_0002710 3300049569 Bacteria 13812
116 Ga0501032_0005185 3300049569 Bacteria 9710
117 Ga0501033_0002963 3300049570 Bacteria 14183
118 Ga0501033_0003229 3300049570 Bacteria 13486
119 Ga0501034_0043865 3300049571 Bacteria 4523
120 Ga0501036_0083352 3300049572 Bacteria 2702
121 Ga0501038_0001592 3300049574 Bacteria 21061
122 Ga0501039_0064175 3300049575 Bacteria 2846
123 Ga0501042_0042221 3300049578 Bacteria 3245
124 Ga0501043_0094679 3300049579 Bacteria 2347
125 Ga0501046_0001002 3300049580 Bacteria 27612
126 Ga0501046_0046181 3300049580 Bacteria 3458
127 Ga0501047_0010006 3300049581 Bacteria 8965
128 Ga0501047_0029229 3300049581 Bacteria 5315
129 Ga0501047_0100190 3300049581 Bacteria 2776
130 Ga0501070_0069683 3300049586 Bacteria 2912
131 Ga0501199_003636 3300049650 Bacteria 1489
132 Ga0501227_002180 3300049665 Bacteria 4328
133 Ga0501243_003623 3300049675 Bacteria 2300
134 Ga0501080_0060136 3300049742 Bacteria 3536
135 Ga0501083_0002724 3300049744 Bacteria 12203
136 Ga0501083_0003039 3300049744 Bacteria 11664
137 Ga0501035_0074167 3300049822 Bacteria 3010
138 Ga0501035_0101176 3300049822 Bacteria 2529
139 Ga0501044_0038923 3300049823 Bacteria 4965
140 Ga0500559_0000940 3300053136 Bacteria 18344
141 Ga0500568_0007465 3300053139 Bacteria 5360
142 Ga0501082_0073331 3300060353 Bacteria 2949

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053136 Ga0500559_0000940 Ga0500559_0000940_8652_9941 417
2 3300014325 Ga0163163_10023694 Ga0163163_100236942 419
3 3300028563 Ga0265319_1003543 Ga0265319_10035437 419
4 3300031240 Ga0265320_10006580 Ga0265320_100065805 419
5 3300031595 Ga0265313_10005140 Ga0265313_100051406 419
6 3300044684 Ga0466966_0041930 Ga0466966_0041930_250_1515 419
7 3300003320 rootH2_10019649 rootH2_100196497 420
8 3300005329 Ga0070683_100005308 Ga0070683_1000053086 420
9 3300005334 Ga0068869_100000377 Ga0068869_1000003779 420
10 3300005338 Ga0068868_100052631 Ga0068868_1000526312 420
11 3300005459 Ga0068867_100005809 Ga0068867_1000058099 420
12 3300005530 Ga0070679_100109532 Ga0070679_1001095323 420
13 3300006358 Ga0068871_100001291 Ga0068871_1000012916 420
14 3300006881 Ga0068865_100007171 Ga0068865_1000071715 420
15 3300025921 Ga0207652_10069204 Ga0207652_100692043 420
16 3300025938 Ga0207704_10002747 Ga0207704_100027476 420
17 3300025942 Ga0207689_10000903 Ga0207689_100009038 420
18 3300025944 Ga0207661_10017920 Ga0207661_100179204 420
19 3300026023 Ga0207677_10049604 Ga0207677_100496042 420
20 3300026089 Ga0207648_10010424 Ga0207648_100104249 420
21 3300028556 Ga0265337_1003436 Ga0265337_10034363 420
22 3300028563 Ga0265319_1000008 Ga0265319_100000890 420
23 3300028563 Ga0265319_1020499 Ga0265319_10204992 420
24 3300028563 Ga0265319_1031751 Ga0265319_10317511 420
25 3300028573 Ga0265334_10004478 Ga0265334_100044785 420
26 3300028577 Ga0265318_10000216 Ga0265318_1000021615 420
27 3300028577 Ga0265318_10000954 Ga0265318_1000095419 420
28 3300028577 Ga0265318_10001017 Ga0265318_100010179 420
29 3300028577 Ga0265318_10001567 Ga0265318_100015677 420
30 3300028577 Ga0265318_10030925 Ga0265318_100309252 420
31 3300028653 Ga0265323_10000181 Ga0265323_1000018125 420
32 3300028653 Ga0265323_10001424 Ga0265323_100014246 420
33 3300028653 Ga0265323_10004749 Ga0265323_100047496 420
34 3300028654 Ga0265322_10000800 Ga0265322_100008008 420
35 3300028654 Ga0265322_10002192 Ga0265322_100021925 420
36 3300028666 Ga0265336_10013070 Ga0265336_100130702 420
37 3300028794 Ga0307515_10101163 Ga0307515_101011631 420
38 3300028800 Ga0265338_10003623 Ga0265338_1000362317 420
39 3300028800 Ga0265338_10004487 Ga0265338_100044878 420
40 3300028800 Ga0265338_10013726 Ga0265338_100137265 420
41 3300029957 Ga0265324_10004387 Ga0265324_100043876 420
42 3300029957 Ga0265324_10012626 Ga0265324_100126264 420
43 3300031235 Ga0265330_10070729 Ga0265330_100707291 420
44 3300031238 Ga0265332_10043959 Ga0265332_100439591 420
45 3300031239 Ga0265328_10049639 Ga0265328_100496392 420
46 3300031240 Ga0265320_10000548 Ga0265320_100005485 420
47 3300031240 Ga0265320_10003621 Ga0265320_100036216 420
48 3300031240 Ga0265320_10005228 Ga0265320_100052286 420
49 3300031240 Ga0265320_10022677 Ga0265320_100226772 420
50 3300031240 Ga0265320_10023332 Ga0265320_100233323 420
51 3300031240 Ga0265320_10027790 Ga0265320_100277902 420
52 3300031250 Ga0265331_10009764 Ga0265331_100097642 420
53 3300031251 Ga0265327_10000016 Ga0265327_10000016343 420
54 3300031251 Ga0265327_10003507 Ga0265327_100035074 420
55 3300031251 Ga0265327_10003751 Ga0265327_100037519 420
56 3300031251 Ga0265327_10004311 Ga0265327_100043112 420
57 3300031344 Ga0265316_10021472 Ga0265316_100214724 420
58 3300031344 Ga0265316_10028659 Ga0265316_100286591 420
59 3300031344 Ga0265316_10048224 Ga0265316_100482243 420
60 3300031344 Ga0265316_10103769 Ga0265316_101037692 420
61 3300031344 Ga0265316_10141546 Ga0265316_101415461 420
62 3300031548 Ga0307408_100000003 Ga0307408_100000003347 420
63 3300031595 Ga0265313_10005309 Ga0265313_1000530910 420
64 3300031595 Ga0265313_10009547 Ga0265313_100095477 420
65 3300031595 Ga0265313_10013446 Ga0265313_100134462 420
66 3300031616 Ga0307508_10003998 Ga0307508_100039984 420
67 3300031711 Ga0265314_10001028 Ga0265314_100010283 420
68 3300031711 Ga0265314_10002501 Ga0265314_1000250114 420
69 3300031711 Ga0265314_10004133 Ga0265314_1000413313 420
70 3300031711 Ga0265314_10005420 Ga0265314_1000542010 420
71 3300031712 Ga0265342_10003694 Ga0265342_100036947 420
72 3300031712 Ga0265342_10011519 Ga0265342_100115193 420
73 3300031712 Ga0265342_10037712 Ga0265342_100377123 420
74 3300031712 Ga0265342_10038015 Ga0265342_100380152 420
75 3300031852 Ga0307410_10000039 Ga0307410_1000003939 420
76 3300031903 Ga0307407_10078269 Ga0307407_100782692 420
77 3300031911 Ga0307412_10102523 Ga0307412_101025232 420
78 3300031995 Ga0307409_100000018 Ga0307409_10000001834 420
79 3300032002 Ga0307416_100000027 Ga0307416_100000027116 420
80 3300037471 Ga0395905_0000036 Ga0395905_0000036_27343_28611 420
81 3300042876 Ga0451577_0000024 Ga0451577_0000024_299031_300419 420
82 3300042876 Ga0451577_0001658 Ga0451577_0001658_694_1965 420
83 3300042876 Ga0451577_0042280 Ga0451577_0042280_619_1887 420
84 3300044673 Ga0453683_0006331 Ga0453683_0006331_1834_3102 420
85 3300044712 Ga0453684_0007933 Ga0453684_0007933_5866_7137 420
86 3300044712 Ga0453684_0043547 Ga0453684_0043547_2694_4109 420
87 3300044712 Ga0453684_0067534 Ga0453684_0067534_1291_2622 420
88 3300045051 Ga0451576_0000730 Ga0451576_0000730_23833_25101 420
89 3300045051 Ga0451576_0006301 Ga0451576_0006301_1091_2359 420
90 3300045051 Ga0451576_0148963 Ga0451576_0148963_13_1428 420
91 3300049568 Ga0501031_0016826 Ga0501031_0016826_189_1457 420
92 3300049569 Ga0501032_0005185 Ga0501032_0005185_2330_3598 420
93 3300049570 Ga0501033_0002963 Ga0501033_0002963_9228_10496 420
94 3300049570 Ga0501033_0003229 Ga0501033_0003229_2979_4247 420
95 3300049571 Ga0501034_0043865 Ga0501034_0043865_3066_4334 420
96 3300049572 Ga0501036_0083352 Ga0501036_0083352_1308_2576 420
97 3300049574 Ga0501038_0001592 Ga0501038_0001592_19605_20873 420
98 3300049575 Ga0501039_0064175 Ga0501039_0064175_1463_2731 420
99 3300049578 Ga0501042_0042221 Ga0501042_0042221_1285_2553 420
100 3300049579 Ga0501043_0094679 Ga0501043_0094679_116_1384 420
101 3300049580 Ga0501046_0001002 Ga0501046_0001002_18998_20266 420
102 3300049580 Ga0501046_0046181 Ga0501046_0046181_1999_3267 420
103 3300049581 Ga0501047_0010006 Ga0501047_0010006_7488_8756 420
104 3300049581 Ga0501047_0029229 Ga0501047_0029229_1586_2854 420
105 3300049581 Ga0501047_0100190 Ga0501047_0100190_1179_2753 420
106 3300049586 Ga0501070_0069683 Ga0501070_0069683_527_1795 420
107 3300049650 Ga0501199_003636 Ga0501199_003636_89_1357 420
108 3300049675 Ga0501243_003623 Ga0501243_003623_668_1939 420
109 3300049742 Ga0501080_0060136 Ga0501080_0060136_960_2228 420
110 3300049744 Ga0501083_0002724 Ga0501083_0002724_2410_3678 420
111 3300049744 Ga0501083_0003039 Ga0501083_0003039_3044_4312 420
112 3300049822 Ga0501035_0074167 Ga0501035_0074167_218_1486 420
113 3300049822 Ga0501035_0101176 Ga0501035_0101176_1189_2457 420
114 3300049823 Ga0501044_0038923 Ga0501044_0038923_692_2056 420
115 3300053139 Ga0500568_0007465 Ga0500568_0007465_1627_2898 420
116 3300060353 Ga0501082_0073331 Ga0501082_0073331_591_1859 420
117 3300031548 Ga0307408_100050734 Ga0307408_1000507342 428
118 3300031901 Ga0307406_10000464 Ga0307406_1000046413 428
119 3300032004 Ga0307414_10000007 Ga0307414_10000007110 428
120 3300049665 Ga0501227_002180 Ga0501227_002180_2073_3551 429
121 3300002077 JGI24744J21845_10002231 JGI24744J21845_100022313 430
122 3300005327 Ga0070658_10008558 Ga0070658_100085586 430
123 3300005344 Ga0070661_100000995 Ga0070661_10000099520 430
124 3300005344 Ga0070661_100048809 Ga0070661_1000488092 430
125 3300005459 Ga0068867_100000472 Ga0068867_1000004723 430
126 3300005564 Ga0070664_100151434 Ga0070664_1001514342 430
127 3300009148 Ga0105243_10000718 Ga0105243_1000071824 430
128 3300013100 Ga0157373_10000384 Ga0157373_1000038413 430
129 3300014969 Ga0157376_10007251 Ga0157376_100072516 430
130 3300025909 Ga0207705_10016920 Ga0207705_100169203 430
131 3300025920 Ga0207649_10003428 Ga0207649_100034286 430
132 3300025935 Ga0207709_10002524 Ga0207709_100025243 430
133 3300025945 Ga0207679_10000645 Ga0207679_1000064512 430
134 3300026089 Ga0207648_10001380 Ga0207648_1000138021 430
135 3300031251 Ga0265327_10001859 Ga0265327_100018591 430
136 3300031903 Ga0307407_10000117 Ga0307407_1000011710 430
137 3300031911 Ga0307412_10000037 Ga0307412_10000037140 430
138 3300032002 Ga0307416_100000781 Ga0307416_10000078110 430
139 3300042130 Ga0450892_000046 Ga0450892_000046_2397_3689 430
140 3300042144 Ga0450889_003373 Ga0450889_003373_18_1310 430
141 3300042532 Ga0450893_0007712 Ga0450893_0007712_134_1426 430
142 3300049569 Ga0501032_0002710 Ga0501032_0002710_10621_11913 430

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13286

HD_assoc

Phosphohydrolase-associated domain

412

511

0.89

PF01966

HD

HD domain

162

249

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
7lwz-assembly1.cif.gz_B apo structure of vibrio cholerae dgtpase protein vc1979 0.862 6 418
7lwz-assembly1.cif.gz_B apo structure of vibrio cholerae dgtpase protein vc1979 0.8578 6 418
7lwz-assembly1.cif.gz_C apo structure of vibrio cholerae dgtpase protein vc1979 0.8475 7 418
7lwz-assembly1.cif.gz_F apo structure of vibrio cholerae dgtpase protein vc1979 0.8449 7 418
7lwz-assembly1.cif.gz_C apo structure of vibrio cholerae dgtpase protein vc1979 0.8434 7 418
ID Description Score Start End Superfamily
2pgsA01 Mainly Alpha;Orthogonal Bundle;Hypothetical protein af1432;Hypothetical protein af1432 0.8055 9 199 1.10.3210.10
2dqbE00 Mainly Alpha;Orthogonal Bundle;Hypothetical protein af1432;Hypothetical protein af1432 0.7711 12 417 1.10.3210.10
af_P15723_1_151_1.10.3210.10 Mainly Alpha;Orthogonal Bundle;Hypothetical protein af1432;Hypothetical protein af1432 0.7691 9 126 1.10.3210.10
af_P9WNY7_7_418_1.10.3210.10 Mainly Alpha;Orthogonal Bundle;Hypothetical protein af1432;Hypothetical protein af1432 0.7352 6 412 1.10.3210.10
af_P9WNY7_7_418_1.10.3210.10 Mainly Alpha;Orthogonal Bundle;Hypothetical protein af1432;Hypothetical protein af1432 0.7257 6 412 1.10.3210.10
ID Description Score Start End GO Terms
AF-A0A4Q2Y2X0-F1-model_v4 DNTP triphosphohydrolase 0.9705 13 375 GO:0006203
GO:0008832
AF-A0A840V950-F1-model_v4 dGTPase (EC 3.1.5.1) 0.9682 1 430 GO:0006203
GO:0008832
AF-A0A7Y1UI04-F1-model_v4 DNTP triphosphohydrolase 0.9682 2 430 GO:0006203
GO:0008832
AF-A0A4Q2Y2X0-F1-model_v4 DNTP triphosphohydrolase 0.9679 13 375 GO:0006203
GO:0008832
AF-A0A2E9H750-F1-model_v4 deleted 0.9654 1 430

Feature Viewer

pLDDT pTM Quality
88.83 0.9 High
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Predicted Structure (AlphaFold2)

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