F186982

General Info

Members Datasets Scaffolds Average Seq Length
142 96 142 776

Family's Representative Sequence

Representative Sequence 3300049585|Ga0501069_0000133|Ga0501069_0000133_12395_14935
Length 831
Sequence MTDPDAAPSAVAAPLSINGSLAGKRLFITGATGFLGTALVERLLRSVPDCEIALLVRPGRMRTVDQRARREIFRNDCFDRARDEVGGAKAFDELVARRVQVVAGDVGSDGLGLDDRGRELLASCDIVVHSAATVSFDAPLDSAIEVNLLGPTRIAQTLHDLAVAPHLIAVSTCYVAGNRRGAAPEAMVNASPFWVDLDWRKEVDAARRVRADREAASRTPDKLKEFMAEARRELGAAGAPLLADKSEQLRTAWVRAEMVEAGRVRAASVGWPDAYAYTKALGEVALAENRGDIPVSTVRPSIIESSWAEPRPGWIRGFRMAEPVIVSYARGLLKEFPGIPEGVVDVIPVDLVVAAIIGVAAKGPEPQLPHPSIYQVASGTANPLGYQRLFDLVRNWFTENPVYDSNGQPIVVGEWSFPGRGQVQAQLQRGHDLMERAEKLLHALPLRGRQAEWSARIEERKDLAARALAYVELYGAYTECEALYGVDRLLGLWDQLPADDQAAFCFDPRVIDWDHYAREIHLPSVVEHSRVRTTAHRAKGESRPERLRRQVLSPERHLAAFDLENTLIASNVVTSYAWLASRHLDPGDKRTFAAKLIADAPGLLKLDRRDRSDFLRHFYRRYEDAPVDQLAVDSVELFNQLILTKAFPAGIRRVREHRALGHRTVLITGALDFVVAPLRPLFDDIVCARMSTEERDGVERYTGRVTDAPPTGESRAQVLFDYADAEGLSLREAVAYADSASDLPMLDAVGFPVAVNPETRLSAIARKRGWLVEQWSRTPGGPAPALPLARRGEHEADDFLSRLTAAIGTPLLEKAAGHTRRTARAAARGAS

Samples

Sample ID Description Type Environment
1 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
2 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
3 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
4 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
5 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
6 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
7 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
8 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
9 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
10 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
11 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
12 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
13 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
14 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
15 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
16 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
17 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
18 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
19 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
20 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
22 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
30 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
31 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
32 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
33 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
34 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
35 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
36 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
37 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
38 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
39 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
40 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
41 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
42 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
43 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
44 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
45 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
46 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
47 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
48 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
49 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
50 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
51 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
52 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
53 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
54 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
55 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
56 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
57 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
58 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
59 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
60 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
61 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
62 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
63 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
64 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
66 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
67 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
68 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
70 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
71 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
72 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
73 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
74 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
75 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
76 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
77 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
78 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
79 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
80 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
81 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
82 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
83 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
86 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
87 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
88 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
89 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
90 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
91 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
92 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
93 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
94 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
95 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
96 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.93
Nodule 0
Rhizoplane 3.52
Rhizosphere 86.62
Stem 0
Stem Tuber 0
Unclassified 4.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25407J50210_10001095 3300003373 Bacteria 5970
2 Ga0070689_100029346 3300005340 Bacteria 4162
3 Ga0070671_100006771 3300005355 Bacteria 9167
4 Ga0070674_100030745 3300005356 Bacteria 3552
5 Ga0070681_10026345 3300005458 Bacteria 5845
6 Ga0070681_10072488 3300005458 Bacteria 3407
7 Ga0070695_100009075 3300005545 Bacteria 5911
8 Ga0068866_10024645 3300005718 Bacteria 2818
9 Ga0068858_100019002 3300005842 Bacteria 6430
10 Ga0068862_100017888 3300005844 Bacteria 5902
11 Ga0081455_10003209 3300005937 Bacteria 18928
12 Ga0081538_10001179 3300005981 Bacteria 27583
13 Ga0081538_10004067 3300005981 Bacteria 13615
14 Ga0075365_10053243 3300006038 Bacteria 2680
15 Ga0075364_10006929 3300006051 Bacteria 6694
16 Ga0075428_100000775 3300006844 Bacteria 33268
17 Ga0075428_100006042 3300006844 Bacteria 13448
18 Ga0075430_100004484 3300006846 Bacteria 11762
19 Ga0075431_100000411 3300006847 Bacteria 34786
20 Ga0075431_100000735 3300006847 Bacteria 28253
21 Ga0075431_100006747 3300006847 Bacteria 11399
22 Ga0075431_100101002 3300006847 Bacteria 2976
23 Ga0075429_100018022 3300006880 Bacteria 6107
24 Ga0075429_100018814 3300006880 Bacteria 5983
25 Ga0111539_10028541 3300009094 Bacteria 6806
26 Ga0111539_10043556 3300009094 Bacteria 5380
27 Ga0111539_10088405 3300009094 Bacteria 3640
28 Ga0105245_10002102 3300009098 Bacteria 18025
29 Ga0105245_10033292 3300009098 Bacteria 4566
30 Ga0114129_10000584 3300009147 Bacteria 44986
31 Ga0114129_10048814 3300009147 Bacteria 5949
32 Ga0213871_10005856 3300021441 Bacteria 2569
33 Ga0207645_10037712 3300025907 Bacteria 3101
34 Ga0207707_10001958 3300025912 Bacteria 18719
35 Ga0207687_10004330 3300025927 Bacteria 9478
36 Ga0207644_10011820 3300025931 Bacteria 5781
37 Ga0207703_10013169 3300026035 Bacteria 6443
38 Ga0207648_10005991 3300026089 Bacteria 12149
39 Ga0268265_10016043 3300028380 Bacteria 5139
40 Ga0265327_10000607 3300031251 Bacteria 59510
41 Ga0316580_10001442 3300032139 Bacteria 6211
42 Ga0373930_0002832 3300034816 Bacteria 2717
43 Ga0373929_0001876 3300035085 Bacteria 3942
44 Ga0373932_0001931 3300035112 Bacteria 5510
45 Ga0316574_0014269 3300035398 Bacteria 4585
46 Ga0316574_0022206 3300035398 Bacteria 3777
47 Ga0316574_0030169 3300035398 Bacteria 3282
48 Ga0373931_0000005 3300035691 Bacteria 480485
49 Ga0373931_0000019 3300035691 Bacteria 186534
50 Ga0373927_0023437 3300035695 Bacteria 4043
51 Ga0373937_0040806 3300036401 Bacteria 4231
52 Ga0316582_0022028 3300036647 Bacteria 3776
53 Ga0316582_0039938 3300036647 Bacteria 2925
54 Ga0400485_08926 3300038735 Bacteria 19339
55 Ga0400483_059746 3300039062 Bacteria 5797
56 Ga0400483_266473 3300039062 Bacteria 61702
57 Ga0400483_285242 3300039062 Bacteria 19803
58 Ga0436365_0052124 3300039437 Bacteria 5038
59 Ga0436365_0745622 3300039437 Bacteria 13402
60 Ga0436365_0962468 3300039437 Bacteria 5300
61 Ga0436360_0680805 3300039438 Bacteria 7983
62 Ga0436361_0635889 3300039447 Bacteria 3725
63 Ga0451577_0014968 3300042876 Bacteria 7219
64 Ga0453684_0013878 3300044712 Bacteria 12997
65 Ga0495651_0062480 3300046462 Bacteria 2849
66 Ga0495630_0047141 3300046517 Bacteria 3223
67 Ga0495587_0038441 3300046536 Bacteria 2868
68 Ga0495667_0001959 3300046559 Bacteria 13621
69 Ga0495634_0045563 3300046642 Bacteria 2964
70 Ga0495657_0004741 3300046675 Bacteria 10835
71 Ga0495604_0017356 3300047317 Bacteria 5761
72 Ga0495672_0002067 3300047320 Bacteria 18849
73 Ga0495680_0009124 3300047322 Bacteria 8951
74 Ga0495680_0059562 3300047322 Bacteria 2947
75 Ga0495675_0019584 3300047444 Bacteria 4299
76 Ga0495602_0039399 3300048088 Bacteria 4352
77 Ga0496106_0025166 3300048909 Bacteria 4428
78 Ga0496109_0040145 3300048912 Bacteria 4238
79 Ga0496110_0011706 3300048913 Bacteria 7196
80 Ga0496110_0064848 3300048913 Bacteria 3229
81 Ga0496114_0004095 3300048917 Bacteria 11272
82 Ga0501033_0000654 3300049570 Bacteria 32016
83 Ga0501034_0000034 3300049571 Bacteria 242608
84 Ga0501034_0000313 3300049571 Bacteria 86110
85 Ga0501034_0009902 3300049571 Bacteria 9963
86 Ga0501034_0014163 3300049571 Bacteria 8219
87 Ga0501034_0017797 3300049571 Bacteria 7290
88 Ga0501036_0021729 3300049572 Bacteria 5394
89 Ga0501036_0029078 3300049572 Bacteria 4672
90 Ga0501036_0032759 3300049572 Bacteria 4393
91 Ga0501036_0062967 3300049572 Bacteria 3141
92 Ga0501037_0007872 3300049573 Bacteria 7808
93 Ga0501039_0006219 3300049575 Bacteria 9068
94 Ga0501041_0010489 3300049577 Bacteria 5460
95 Ga0501041_0017145 3300049577 Bacteria 4308
96 Ga0501041_0018642 3300049577 Bacteria 4133
97 Ga0501042_0001634 3300049578 Bacteria 13341
98 Ga0501046_0006322 3300049580 Bacteria 10502
99 Ga0501046_0051205 3300049580 Bacteria 3259
100 Ga0501068_0000417 3300049584 Bacteria 21577
101 Ga0501068_0009837 3300049584 Bacteria 5356
102 Ga0501069_0000133 3300049585 Bacteria 32469
103 Ga0501070_0000092 3300049586 Bacteria 76642
104 Ga0501070_0044852 3300049586 Bacteria 3678
105 Ga0501071_0022883 3300049587 Bacteria 4359
106 Ga0501072_0012264 3300049588 Bacteria 6549
107 Ga0501072_0054392 3300049588 Bacteria 3153
108 Ga0501073_0011777 3300049589 Bacteria 6385
109 Ga0501074_0001035 3300049590 Bacteria 18056
110 Ga0501075_0005523 3300049591 Bacteria 8648
111 Ga0501076_0004057 3300049592 Bacteria 10352
112 Ga0501076_0047397 3300049592 Bacteria 3397
113 Ga0501077_0002658 3300049593 Bacteria 10712
114 Ga0501079_0009024 3300049741 Bacteria 7553
115 Ga0501079_0027775 3300049741 Bacteria 4340
116 Ga0501080_0002028 3300049742 Bacteria 17508
117 Ga0501080_0016815 3300049742 Bacteria 6755
118 Ga0501081_0006404 3300049743 Bacteria 7640
119 Ga0501081_0024256 3300049743 Bacteria 4071
120 Ga0501083_0002001 3300049744 Bacteria 14025
121 Ga0501083_0016653 3300049744 Bacteria 5137
122 Ga0501083_0037101 3300049744 Bacteria 3321
123 Ga0501035_0031300 3300049822 Bacteria 4846
124 Ga0501044_0006407 3300049823 Bacteria 13010
125 Ga0501045_0004602 3300049824 Bacteria 9524
126 Ga0501045_0004811 3300049824 Bacteria 9331
127 Ga0501045_0009293 3300049824 Bacteria 6877
128 nmdc:mga00v17_14619_c1 3300050491 Bacteria 4387
129 nmdc:mga0yw44_3305_c1 3300050492 Bacteria 7129
130 nmdc:mga05p37_98511_c1 3300050507 Bacteria 3601
131 nmdc:mga09592_951_c1 3300050508 Bacteria 22788
132 nmdc:mga06r32_1648_c1 3300050510 Bacteria 20151
133 nmdc:mga06r32_6906_c1 3300050510 Bacteria 10205
134 nmdc:mga08y16_27247_c1 3300050511 Bacteria 6021
135 Ga0495595_0002689 3300053084 Bacteria 6978
136 Ga0500568_0000085 3300053139 Bacteria 91299
137 Ga0500616_0000477 3300053153 Bacteria 51936
138 Ga0500616_0007059 3300053153 Bacteria 7207
139 Ga0501084_0001926 3300054114 Bacteria 16571
140 Ga0501084_0004943 3300054114 Bacteria 10896
141 Ga0501084_0012349 3300054114 Bacteria 7075
142 Ga0530510_0005553 3300061734 Bacteria 8740

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049572 Ga0501036_0029078 Ga0501036_0029078_2764_4662 622
2 3300039447 Ga0436361_0635889 Ga0436361_0635889_1705_3708 657
3 3300005545 Ga0070695_100009075 Ga0070695_1000090754 677
4 3300025907 Ga0207645_10037712 Ga0207645_100377121 699
5 3300005458 Ga0070681_10026345 Ga0070681_100263454 703
6 3300025912 Ga0207707_10001958 Ga0207707_100019582 703
7 3300031251 Ga0265327_10000607 Ga0265327_1000060729 734
8 3300046642 Ga0495634_0045563 Ga0495634_0045563_421_2793 734
9 3300049570 Ga0501033_0000654 Ga0501033_0000654_22083_24410 736
10 3300049823 Ga0501044_0006407 Ga0501044_0006407_6241_8568 736
11 3300035691 Ga0373931_0000019 Ga0373931_0000019_3313_5646 737
12 3300039437 Ga0436365_0052124 Ga0436365_0052124_1682_3943 739
13 3300009098 Ga0105245_10002102 Ga0105245_1000210213 740
14 3300025927 Ga0207687_10004330 Ga0207687_100043307 740
15 3300053139 Ga0500568_0000085 Ga0500568_0000085_19497_21869 742
16 3300049571 Ga0501034_0017797 Ga0501034_0017797_1032_3386 745
17 3300005844 Ga0068862_100017888 Ga0068862_1000178884 747
18 3300028380 Ga0268265_10016043 Ga0268265_100160433 747
19 3300049572 Ga0501036_0021729 Ga0501036_0021729_2911_5352 747
20 3300049577 Ga0501041_0017145 Ga0501041_0017145_249_2690 747
21 3300049580 Ga0501046_0051205 Ga0501046_0051205_460_2901 747
22 3300049588 Ga0501072_0054392 Ga0501072_0054392_263_2704 747
23 3300049592 Ga0501076_0047397 Ga0501076_0047397_255_2696 747
24 3300049741 Ga0501079_0009024 Ga0501079_0009024_369_2810 747
25 3300049822 Ga0501035_0031300 Ga0501035_0031300_2189_4630 747
26 3300049824 Ga0501045_0004602 Ga0501045_0004602_6486_8927 747
27 3300054114 Ga0501084_0004943 Ga0501084_0004943_5790_8231 747
28 3300006847 Ga0075431_100101002 Ga0075431_1001010022 756
29 3300034816 Ga0373930_0002832 Ga0373930_0002832_160_2487 756
30 3300035085 Ga0373929_0001876 Ga0373929_0001876_439_2766 756
31 3300035112 Ga0373932_0001931 Ga0373932_0001931_2179_4506 756
32 3300035691 Ga0373931_0000005 Ga0373931_0000005_263777_266104 756
33 3300036647 Ga0316582_0039938 Ga0316582_0039938_453_2807 756
34 3300005355 Ga0070671_100006771 Ga0070671_1000067716 757
35 3300005842 Ga0068858_100019002 Ga0068858_1000190024 757
36 3300025931 Ga0207644_10011820 Ga0207644_100118203 757
37 3300026035 Ga0207703_10013169 Ga0207703_100131694 757
38 3300006847 Ga0075431_100000735 Ga0075431_10000073518 758
39 3300048909 Ga0496106_0025166 Ga0496106_0025166_836_3181 758
40 3300005458 Ga0070681_10072488 Ga0070681_100724882 759
41 3300006844 Ga0075428_100006042 Ga0075428_1000060422 759
42 3300006847 Ga0075431_100006747 Ga0075431_1000067477 759
43 3300006880 Ga0075429_100018022 Ga0075429_1000180223 759
44 3300009147 Ga0114129_10048814 Ga0114129_100488144 759
45 3300021441 Ga0213871_10005856 Ga0213871_100058562 759
46 3300039437 Ga0436365_0962468 Ga0436365_0962468_2104_4410 759
47 3300039438 Ga0436360_0680805 Ga0436360_0680805_3691_6000 759
48 3300050491 nmdc:mga00v17_14619_c1 nmdc:mga00v17_14619_c1_773_3175 759
49 3300005340 Ga0070689_100029346 Ga0070689_1000293462 760
50 3300005356 Ga0070674_100030745 Ga0070674_1000307452 760
51 3300005718 Ga0068866_10024645 Ga0068866_100246452 760
52 3300026089 Ga0207648_10005991 Ga0207648_1000599112 760
53 3300048913 Ga0496110_0064848 Ga0496110_0064848_172_2517 760
54 3300050507 nmdc:mga05p37_98511_c1 nmdc:mga05p37_98511_c1_497_2953 760
55 3300039062 Ga0400483_266473 Ga0400483_266473_18211_20547 761
56 3300049571 Ga0501034_0009902 Ga0501034_0009902_3913_6231 762
57 3300046517 Ga0495630_0047141 Ga0495630_0047141_445_2820 764
58 3300050492 nmdc:mga0yw44_3305_c1 nmdc:mga0yw44_3305_c1_3826_6153 764
59 3300009094 Ga0111539_10028541 Ga0111539_100285413 766
60 3300038735 Ga0400485_08926 Ga0400485_08926_774_3146 766
61 3300039062 Ga0400483_059746 Ga0400483_059746_2791_5127 766
62 3300039062 Ga0400483_285242 Ga0400483_285242_4589_6937 766
63 3300039437 Ga0436365_0745622 Ga0436365_0745622_5604_7958 766
64 3300048913 Ga0496110_0011706 Ga0496110_0011706_4503_6923 766
65 3300049588 Ga0501072_0012264 Ga0501072_0012264_806_3160 766
66 3300050511 nmdc:mga08y16_27247_c1 nmdc:mga08y16_27247_c1_1311_3737 766
67 3300009098 Ga0105245_10033292 Ga0105245_100332923 767
68 3300048912 Ga0496109_0040145 Ga0496109_0040145_1565_3985 767
69 3300048917 Ga0496114_0004095 Ga0496114_0004095_3299_5719 767
70 3300035398 Ga0316574_0030169 Ga0316574_0030169_185_2521 768
71 3300049571 Ga0501034_0000313 Ga0501034_0000313_57720_60071 768
72 3300049571 Ga0501034_0014163 Ga0501034_0014163_224_2575 768
73 3300035695 Ga0373927_0023437 Ga0373927_0023437_1111_3483 769
74 3300042876 Ga0451577_0014968 Ga0451577_0014968_4788_7136 770
75 3300044712 Ga0453684_0013878 Ga0453684_0013878_8983_11331 770
76 3300047320 Ga0495672_0002067 Ga0495672_0002067_11602_13956 770
77 3300047322 Ga0495680_0059562 Ga0495680_0059562_266_2611 770
78 3300009094 Ga0111539_10088405 Ga0111539_100884052 771
79 3300035398 Ga0316574_0022206 Ga0316574_0022206_697_3057 773
80 3300036647 Ga0316582_0022028 Ga0316582_0022028_625_2985 773
81 3300049584 Ga0501068_0009837 Ga0501068_0009837_304_2655 773
82 3300049589 Ga0501073_0011777 Ga0501073_0011777_3805_6156 773
83 3300049744 Ga0501083_0002001 Ga0501083_0002001_7158_9509 773
84 3300049744 Ga0501083_0016653 Ga0501083_0016653_1508_3859 773
85 3300054114 Ga0501084_0001926 Ga0501084_0001926_12853_15204 773
86 3300049571 Ga0501034_0000034 Ga0501034_0000034_136022_138376 774
87 3300049572 Ga0501036_0062967 Ga0501036_0062967_766_3129 774
88 3300049573 Ga0501037_0007872 Ga0501037_0007872_964_3318 774
89 3300049577 Ga0501041_0018642 Ga0501041_0018642_1115_3478 774
90 3300049584 Ga0501068_0000417 Ga0501068_0000417_17569_19923 774
91 3300049586 Ga0501070_0044852 Ga0501070_0044852_178_2532 774
92 3300049587 Ga0501071_0022883 Ga0501071_0022883_1332_3695 774
93 3300049590 Ga0501074_0001035 Ga0501074_0001035_10125_12479 774
94 3300049742 Ga0501080_0002028 Ga0501080_0002028_11785_14139 774
95 3300049744 Ga0501083_0037101 Ga0501083_0037101_415_2769 774
96 3300053153 Ga0500616_0000477 Ga0500616_0000477_26006_28360 774
97 3300053153 Ga0500616_0007059 Ga0500616_0007059_859_3273 776
98 3300049592 Ga0501076_0004057 Ga0501076_0004057_5225_7588 777
99 3300049741 Ga0501079_0027775 Ga0501079_0027775_1340_3703 777
100 3300049743 Ga0501081_0006404 Ga0501081_0006404_4193_6556 777
101 3300049824 Ga0501045_0009293 Ga0501045_0009293_213_2576 777
102 3300054114 Ga0501084_0012349 Ga0501084_0012349_555_2918 777
103 3300006844 Ga0075428_100000775 Ga0075428_10000077513 778
104 3300006846 Ga0075430_100004484 Ga0075430_1000044849 778
105 3300006847 Ga0075431_100000411 Ga0075431_1000004119 778
106 3300006880 Ga0075429_100018814 Ga0075429_1000188144 778
107 3300006051 Ga0075364_10006929 Ga0075364_100069294 779
108 3300032139 Ga0316580_10001442 Ga0316580_100014422 779
109 3300005937 Ga0081455_10003209 Ga0081455_100032097 780
110 3300009147 Ga0114129_10000584 Ga0114129_1000058419 780
111 3300035398 Ga0316574_0014269 Ga0316574_0014269_342_2714 780
112 3300050508 nmdc:mga09592_951_c1 nmdc:mga09592_951_c1_12522_14903 780
113 3300050510 nmdc:mga06r32_1648_c1 nmdc:mga06r32_1648_c1_4346_6727 780
114 3300049572 Ga0501036_0032759 Ga0501036_0032759_1189_3609 781
115 3300049575 Ga0501039_0006219 Ga0501039_0006219_454_2874 781
116 3300049577 Ga0501041_0010489 Ga0501041_0010489_1741_4161 781
117 3300049578 Ga0501042_0001634 Ga0501042_0001634_6599_9019 781
118 3300049580 Ga0501046_0006322 Ga0501046_0006322_6949_9369 781
119 3300049591 Ga0501075_0005523 Ga0501075_0005523_4090_6510 781
120 3300049593 Ga0501077_0002658 Ga0501077_0002658_2566_4986 781
121 3300049743 Ga0501081_0024256 Ga0501081_0024256_1012_3432 781
122 3300049824 Ga0501045_0004811 Ga0501045_0004811_5959_8379 781
123 3300006038 Ga0075365_10053243 Ga0075365_100532432 783
124 3300009094 Ga0111539_10043556 Ga0111539_100435563 783
125 3300050510 nmdc:mga06r32_6906_c1 nmdc:mga06r32_6906_c1_2025_4406 783
126 3300005981 Ga0081538_10004067 Ga0081538_100040673 797
127 3300061734 Ga0530510_0005553 Ga0530510_0005553_3957_6377 797
128 3300036401 Ga0373937_0040806 Ga0373937_0040806_888_3347 800
129 3300046462 Ga0495651_0062480 Ga0495651_0062480_16_2475 800
130 3300046536 Ga0495587_0038441 Ga0495587_0038441_142_2601 800
131 3300046559 Ga0495667_0001959 Ga0495667_0001959_6551_9010 800
132 3300046675 Ga0495657_0004741 Ga0495657_0004741_1656_4115 800
133 3300047317 Ga0495604_0017356 Ga0495604_0017356_2037_4496 800
134 3300047322 Ga0495680_0009124 Ga0495680_0009124_2828_5287 800
135 3300047444 Ga0495675_0019584 Ga0495675_0019584_1193_3652 800
136 3300048088 Ga0495602_0039399 Ga0495602_0039399_1111_3570 800
137 3300053084 Ga0495595_0002689 Ga0495595_0002689_3896_6355 800
138 3300003373 JGI25407J50210_10001095 JGI25407J50210_100010954 802
139 3300005981 Ga0081538_10001179 Ga0081538_1000117922 802
140 3300049585 Ga0501069_0000133 Ga0501069_0000133_12395_14935 802
141 3300049586 Ga0501070_0000092 Ga0501070_0000092_14279_16819 802
142 3300049742 Ga0501080_0016815 Ga0501080_0016815_3984_6524 802

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07993

NAD_binding_4

Male sterility protein

28

356

0.98

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

26

195

0.83

PF12710

HAD

haloacid dehalogenase-like hydrolase

559

747

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
5hy5-assembly1.cif.gz_B crystal structure of a tryptophan 6-halogenase (stth) from streptomyces toxytricini 0.8521 16 47
8h0m-assembly1.cif.gz_A crystal structure of viod 0.8434 16 51
4z44-assembly1.cif.gz_A-2 f454k mutant of tryptophan 7-halogenase prna 0.8361 14 47
7aqu-assembly1.cif.gz_A flavin-dependent tryptophan halogenase thal: n-terminally his-tagged form of quintuple mutant (nhis-thal-rebh5) 0.8333 16 50
2jkc-assembly1.cif.gz_A-2 crystal structure of e346d of tryptophan 7-halogenase (prna) 0.8327 14 47
ID Description Score Start End Superfamily
af_Q86KT5_213_287_3.40.50.1000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.9152 691 732 3.40.50.1000
af_A0A368UKR1_20_264_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8715 57 319 3.40.50.720
af_Q2FV16_5_493_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8715 14 50 3.50.50.60
af_A0A0P0W8X9_2_169_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8658 7 163 3.40.50.720
3fvvB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.8621 626 751 3.40.50.1000
ID Description Score Start End GO Terms
AF-A0A2D6L3E0-F1-model_v4 deleted 0.9745 9 497
AF-A0A538JCE0-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9667 9 762 GO:0010345
GO:0035336
GO:0043231
GO:0080019
AF-A0A538BB56-F1-model_v4 HAD-IB family hydrolase 0.9653 119 762 GO:0010345
GO:0016787
GO:0035336
GO:0043231
GO:0080019
AF-A0A2W5YZK6-F1-model_v4 HAD-IB family hydrolase 0.9622 9 343 GO:0010345
GO:0016787
GO:0035336
GO:0043231
GO:0080019
AF-A0A538FSK5-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9616 9 768 GO:0010345
GO:0035336
GO:0043231
GO:0080019

Feature Viewer

pLDDT pTM Quality
82.01 0.73 High
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Predicted Structure (AlphaFold2)

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