F187095

General Info

Members Datasets Scaffolds Average Seq Length
142 98 142 167

Family's Representative Sequence

Representative Sequence 3300050512|nmdc:mga0n895_58110_c1|nmdc:mga0n895_58110_c1_2314_2865
Length 183
Sequence MQSTFHVEKIRQSIKQWLAFFMAMVIVSGITVLPAEWELSIATKFFNEDSFIGGWLGEVYMAIRNTSARYPYLFYGYDWLAFAHIVLAIAFVGPYKDPLKNKWVIEFGAIVCLLIIPFALIAGYFRDIPFWWRLIDCSFGIFGLIPLGICHNKIVELERMENQSEKQFEEFNNLITHQQNKLS

Samples

Sample ID Description Type Environment
1 3300000044 Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - sample from Arabidopsis soil old Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
44 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
66 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
67 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
68 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
69 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
70 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
71 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
72 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
73 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
74 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
75 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
76 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
77 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
78 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
79 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
80 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
83 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
84 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
85 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
86 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
87 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
88 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
89 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
90 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
91 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
95 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
96 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
97 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
98 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.41
Nodule 0
Rhizoplane 0
Rhizosphere 97.89
Stem 0
Stem Tuber 0
Unclassified 0.7

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 ARSoilOldRDRAFT_c006548 3300000044 Bacteria 977
2 JGI24751J29686_10005748 3300002459 Bacteria 2528
3 rootH1_10042233 3300003323 Bacteria 3038
4 Ga0070683_100059027 3300005329 Bacteria 3564
5 Ga0070670_100015827 3300005331 Bacteria 6472
6 Ga0068869_100058198 3300005334 Bacteria 2825
7 Ga0068869_100786094 3300005334 Bacteria 817
8 Ga0068868_100005937 3300005338 Bacteria 8612
9 Ga0068868_101101416 3300005338 Bacteria 731
10 Ga0070691_10115560 3300005341 Bacteria 1346
11 Ga0070661_100019629 3300005344 Bacteria 4816
12 Ga0070668_100529693 3300005347 Bacteria 1023
13 Ga0070669_101117160 3300005353 Bacteria 679
14 Ga0070675_100268181 3300005354 Unclassified 1497
15 Ga0070671_100017765 3300005355 Bacteria 5767
16 Ga0070671_100228981 3300005355 Bacteria 1577
17 Ga0070673_100380156 3300005364 Bacteria 1259
18 Ga0070667_100069803 3300005367 Bacteria 2990
19 Ga0070662_100078135 3300005457 Bacteria 2458
20 Ga0068867_101917496 3300005459 Bacteria 559
21 Ga0070684_100007553 3300005535 Bacteria 8465
22 Ga0068853_100004736 3300005539 Bacteria 10567
23 Ga0068853_100426975 3300005539 Bacteria 1244
24 Ga0068853_100537705 3300005539 Bacteria 1106
25 Ga0070686_100722961 3300005544 Bacteria 796
26 Ga0070664_100001774 3300005564 Bacteria 17302
27 Ga0068857_100026740 3300005577 Bacteria 5086
28 Ga0068854_100020807 3300005578 Bacteria 4445
29 Ga0068856_100053726 3300005614 Bacteria 3972
30 Ga0068864_100024055 3300005618 Bacteria 5121
31 Ga0068866_10190278 3300005718 Bacteria 1219
32 Ga0068861_100390062 3300005719 Bacteria 1233
33 Ga0068861_100412765 3300005719 Bacteria 1201
34 Ga0068861_100550602 3300005719 Unclassified 1051
35 Ga0068863_100433070 3300005841 Bacteria 1289
36 Ga0070715_10421066 3300006163 Unclassified 747
37 Ga0075434_100652904 3300006871 Bacteria 1070
38 Ga0075435_100782717 3300007076 Unclassified 830
39 Ga0105240_10464621 3300009093 Unclassified 1413
40 Ga0105245_10039598 3300009098 Bacteria 4196
41 Ga0105247_10003381 3300009101 Bacteria 10432
42 Ga0105243_11477645 3300009148 Bacteria 703
43 Ga0105242_10428946 3300009176 Bacteria 1241
44 Ga0105242_10450048 3300009176 Unclassified 1214
45 Ga0105248_10515292 3300009177 Unclassified 1348
46 Ga0105238_10007689 3300009551 Bacteria 10778
47 Ga0105238_10017958 3300009551 Bacteria 7192
48 Ga0105238_10024981 3300009551 Bacteria 6090
49 Ga0105249_10002193 3300009553 Bacteria 16909
50 Ga0105249_10010536 3300009553 Bacteria 8122
51 Ga0163162_10020100 3300013306 Bacteria 6556
52 Ga0163162_10923735 3300013306 Bacteria 985
53 Ga0163162_11265439 3300013306 Bacteria 838
54 Ga0163163_10527248 3300014325 Bacteria 1243
55 Ga0157379_10244990 3300014968 Bacteria 1626
56 Ga0157379_10583455 3300014968 Bacteria 1042
57 Ga0157379_11510332 3300014968 Unclassified 654
58 Ga0163161_10408776 3300017792 Unclassified 1090
59 Ga0207645_10013131 3300025907 Bacteria 5595
60 Ga0207681_10078161 3300025923 Bacteria 2328
61 Ga0207694_10012761 3300025924 Bacteria 6330
62 Ga0207694_10165755 3300025924 Unclassified 1787
63 Ga0207694_10171592 3300025924 Bacteria 1756
64 Ga0207650_10017872 3300025925 Bacteria 4968
65 Ga0207706_10029992 3300025933 Bacteria 4854
66 Ga0207686_10280350 3300025934 Bacteria 1230
67 Ga0207686_10337254 3300025934 Unclassified 1131
68 Ga0207686_10922278 3300025934 Bacteria 706
69 Ga0207689_10099860 3300025942 Bacteria 2385
70 Ga0207689_10302606 3300025942 Bacteria 1325
71 Ga0207661_10042713 3300025944 Bacteria 3575
72 Ga0207679_10000358 3300025945 Bacteria 33285
73 Ga0207651_10328510 3300025960 Bacteria 1281
74 Ga0207712_10021410 3300025961 Bacteria 4245
75 Ga0207668_10895879 3300025972 Bacteria 789
76 Ga0207658_10334110 3300025986 Bacteria 1315
77 Ga0207677_10129508 3300026023 Bacteria 1913
78 Ga0207639_10004252 3300026041 Bacteria 9654
79 Ga0207702_10011100 3300026078 Bacteria 7519
80 Ga0207641_10281948 3300026088 Bacteria 1563
81 Ga0207641_10415733 3300026088 Bacteria 1294
82 Ga0207648_10401058 3300026089 Bacteria 1243
83 Ga0207674_10021661 3300026116 Bacteria 6919
84 Ga0207674_10174284 3300026116 Bacteria 2103
85 Ga0207674_10451234 3300026116 Unclassified 1243
86 Ga0207675_101260748 3300026118 Bacteria 760
87 Ga0268265_10266748 3300028380 Bacteria 1525
88 Ga0265337_1001805 3300028556 Bacteria 10278
89 Ga0265337_1008056 3300028556 Bacteria 3873
90 Ga0265337_1008882 3300028556 Bacteria 3621
91 Ga0265337_1014808 3300028556 Bacteria 2575
92 Ga0265337_1027032 3300028556 Unclassified 1733
93 Ga0265319_1004778 3300028563 Bacteria 6643
94 Ga0265319_1008650 3300028563 Bacteria 4435
95 Ga0265334_10074878 3300028573 Unclassified 1256
96 Ga0265318_10017015 3300028577 Bacteria 2992
97 Ga0265323_10047945 3300028653 Bacteria 1527
98 Ga0265336_10013837 3300028666 Unclassified 2684
99 Ga0265336_10048346 3300028666 Unclassified 1290
100 Ga0265338_10015898 3300028800 Bacteria 8233
101 Ga0265338_10027171 3300028800 Bacteria 5748
102 Ga0265338_10081450 3300028800 Unclassified 2714
103 Ga0265338_10131073 3300028800 Bacteria 1979
104 Ga0265338_10232065 3300028800 Unclassified 1372
105 Ga0265338_10469895 3300028800 Bacteria 888
106 Ga0265324_10000170 3300029957 Bacteria 50529
107 Ga0265324_10116417 3300029957 Unclassified 908
108 Ga0265320_10005134 3300031240 Bacteria 8453
109 Ga0265320_10066043 3300031240 Bacteria 1715
110 Ga0265320_10115291 3300031240 Unclassified 1228
111 Ga0265325_10040465 3300031241 Bacteria 2447
112 Ga0265325_10135398 3300031241 Bacteria 1176
113 Ga0265327_10000600 3300031251 Bacteria 59726
114 Ga0265316_10007270 3300031344 Bacteria 10448
115 Ga0265316_10009551 3300031344 Bacteria 8919
116 Ga0265316_10022950 3300031344 Bacteria 5250
117 Ga0265316_10738265 3300031344 Unclassified 692
118 Ga0265313_10033050 3300031595 Bacteria 2633
119 Ga0265314_10104662 3300031711 Unclassified 1812
120 Ga0265314_10288955 3300031711 Unclassified 924
121 Ga0373935_0567934 3300035692 Bacteria 828
122 Ga0373937_0729331 3300036401 Unclassified 938
123 Ga0395900_0077672 3300037418 Bacteria 3411
124 Ga0395905_0003378 3300037471 Bacteria 17099
125 Ga0395901_0551678 3300038443 Bacteria 1168
126 Ga0495630_0406285 3300046517 Unclassified 1043
127 Ga0495640_0184182 3300046533 Bacteria 1330
128 Ga0495622_0030102 3300046557 Bacteria 2536
129 Ga0495667_0040934 3300046559 Bacteria 3074
130 Ga0495667_0042647 3300046559 Bacteria 3009
131 Ga0495667_0468478 3300046559 Unclassified 791
132 Ga0495635_0122423 3300046663 Bacteria 1774
133 Ga0495680_0474243 3300047322 Unclassified 853
134 Ga0495684_0278499 3300047471 Unclassified 1208
135 Ga0501033_0020698 3300049570 Unclassified 4971
136 Ga0501043_0057121 3300049579 Bacteria 3065
137 Ga0501035_0129121 3300049822 Bacteria 2204
138 Ga0501044_0004128 3300049823 Bacteria 16299
139 nmdc:mga0n895_58110_c1 3300050512 Unclassified 3813
140 nmdc:mga08x19_584156_c1 3300050514 Unclassified 791
141 Ga0500641_0101597 3300053096 Unclassified 1233
142 Ga0500611_000019 3300053727 Bacteria 110161

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300003323 rootH1_10042233 rootH1_100422334 140
2 3300005338 Ga0068868_101101416 Ga0068868_1011014161 143
3 3300006871 Ga0075434_100652904 Ga0075434_1006529041 143
4 3300007076 Ga0075435_100782717 Ga0075435_1007827172 143
5 3300009098 Ga0105245_10039598 Ga0105245_100395982 143
6 3300009176 Ga0105242_10450048 Ga0105242_104500481 143
7 3300031240 Ga0265320_10005134 Ga0265320_100051347 143
8 3300028800 Ga0265338_10015898 Ga0265338_100158982 144
9 3300005341 Ga0070691_10115560 Ga0070691_101155602 145
10 3300009551 Ga0105238_10017958 Ga0105238_100179583 145
11 3300025924 Ga0207694_10171592 Ga0207694_101715923 145
12 3300028556 Ga0265337_1001805 Ga0265337_10018052 145
13 3300028556 Ga0265337_1008056 Ga0265337_10080564 145
14 3300028556 Ga0265337_1008882 Ga0265337_10088824 145
15 3300028653 Ga0265323_10047945 Ga0265323_100479452 145
16 3300028666 Ga0265336_10013837 Ga0265336_100138372 145
17 3300028800 Ga0265338_10081450 Ga0265338_100814504 145
18 3300028800 Ga0265338_10232065 Ga0265338_102320652 145
19 3300028800 Ga0265338_10469895 Ga0265338_104698951 145
20 3300029957 Ga0265324_10000170 Ga0265324_100001707 145
21 3300031240 Ga0265320_10066043 Ga0265320_100660434 145
22 3300031241 Ga0265325_10135398 Ga0265325_101353981 145
23 3300031344 Ga0265316_10007270 Ga0265316_100072708 145
24 3300031344 Ga0265316_10022950 Ga0265316_100229504 145
25 3300031344 Ga0265316_10738265 Ga0265316_107382652 145
26 3300046557 Ga0495622_0030102 Ga0495622_0030102_331_822 145
27 3300049570 Ga0501033_0020698 Ga0501033_0020698_314_805 145
28 3300049579 Ga0501043_0057121 Ga0501043_0057121_1308_1799 145
29 3300049822 Ga0501035_0129121 Ga0501035_0129121_476_967 145
30 3300049823 Ga0501044_0004128 Ga0501044_0004128_1543_2034 145
31 3300002459 JGI24751J29686_10005748 JGI24751J29686_100057484 146
32 3300005331 Ga0070670_100015827 Ga0070670_1000158274 146
33 3300009553 Ga0105249_10010536 Ga0105249_100105364 146
34 3300025925 Ga0207650_10017872 Ga0207650_100178724 146
35 3300025961 Ga0207712_10021410 Ga0207712_100214104 146
36 3300005367 Ga0070667_100069803 Ga0070667_1000698034 147
37 3300005614 Ga0068856_100053726 Ga0068856_1000537265 147
38 3300005718 Ga0068866_10190278 Ga0068866_101902781 147
39 3300006163 Ga0070715_10421066 Ga0070715_104210662 147
40 3300009551 Ga0105238_10024981 Ga0105238_100249814 147
41 3300014968 Ga0157379_11510332 Ga0157379_115103322 147
42 3300025924 Ga0207694_10165755 Ga0207694_101657553 147
43 3300025934 Ga0207686_10337254 Ga0207686_103372542 147
44 3300026078 Ga0207702_10011100 Ga0207702_100111003 147
45 3300026088 Ga0207641_10281948 Ga0207641_102819482 147
46 3300031344 Ga0265316_10009551 Ga0265316_100095518 147
47 3300053727 Ga0500611_000019 Ga0500611_000019_92568_93065 147
48 3300005719 Ga0068861_100550602 Ga0068861_1005506022 148
49 3300009148 Ga0105243_11477645 Ga0105243_114776451 148
50 3300009177 Ga0105248_10515292 Ga0105248_105152921 148
51 3300009551 Ga0105238_10007689 Ga0105238_1000768911 148
52 3300025924 Ga0207694_10012761 Ga0207694_100127612 148
53 3300026118 Ga0207675_101260748 Ga0207675_1012607482 148
54 3300037418 Ga0395900_0077672 Ga0395900_0077672_2423_2905 148
55 3300037471 Ga0395905_0003378 Ga0395905_0003378_16206_16688 148
56 3300038443 Ga0395901_0551678 Ga0395901_0551678_191_673 148
57 3300009093 Ga0105240_10464621 Ga0105240_104646212 149
58 3300013306 Ga0163162_11265439 Ga0163162_112654392 149
59 3300028556 Ga0265337_1014808 Ga0265337_10148083 150
60 3300028573 Ga0265334_10074878 Ga0265334_100748782 150
61 3300028666 Ga0265336_10048346 Ga0265336_100483462 150
62 3300028800 Ga0265338_10131073 Ga0265338_101310732 150
63 3300031711 Ga0265314_10288955 Ga0265314_102889552 150
64 3300035692 Ga0373935_0567934 Ga0373935_0567934_174_626 150
65 3300028563 Ga0265319_1004778 Ga0265319_10047783 151
66 3300028577 Ga0265318_10017015 Ga0265318_100170154 151
67 3300029957 Ga0265324_10116417 Ga0265324_101164172 151
68 3300031711 Ga0265314_10104662 Ga0265314_101046622 151
69 3300046559 Ga0495667_0468478 Ga0495667_0468478_126_644 151
70 3300046663 Ga0495635_0122423 Ga0495635_0122423_282_800 151
71 3300050514 nmdc:mga08x19_584156_c1 nmdc:mga08x19_584156_c1_95_604 151
72 3300005329 Ga0070683_100059027 Ga0070683_1000590273 152
73 3300005344 Ga0070661_100019629 Ga0070661_1000196296 152
74 3300005535 Ga0070684_100007553 Ga0070684_1000075537 152
75 3300005539 Ga0068853_100004736 Ga0068853_1000047364 152
76 3300005564 Ga0070664_100001774 Ga0070664_1000017747 152
77 3300005577 Ga0068857_100026740 Ga0068857_1000267403 152
78 3300025944 Ga0207661_10042713 Ga0207661_100427133 152
79 3300025945 Ga0207679_10000358 Ga0207679_1000035819 152
80 3300026041 Ga0207639_10004252 Ga0207639_100042524 152
81 3300026116 Ga0207674_10021661 Ga0207674_100216613 152
82 3300005334 Ga0068869_100786094 Ga0068869_1007860942 153
83 3300005338 Ga0068868_100005937 Ga0068868_1000059377 153
84 3300005347 Ga0070668_100529693 Ga0070668_1005296932 153
85 3300005353 Ga0070669_101117160 Ga0070669_1011171601 153
86 3300005354 Ga0070675_100268181 Ga0070675_1002681813 153
87 3300005355 Ga0070671_100017765 Ga0070671_1000177652 153
88 3300005355 Ga0070671_100228981 Ga0070671_1002289812 153
89 3300005364 Ga0070673_100380156 Ga0070673_1003801561 153
90 3300005457 Ga0070662_100078135 Ga0070662_1000781353 153
91 3300005459 Ga0068867_101917496 Ga0068867_1019174961 153
92 3300005539 Ga0068853_100426975 Ga0068853_1004269752 153
93 3300005578 Ga0068854_100020807 Ga0068854_1000208073 153
94 3300005719 Ga0068861_100390062 Ga0068861_1003900622 153
95 3300009176 Ga0105242_10428946 Ga0105242_104289461 153
96 3300013306 Ga0163162_10020100 Ga0163162_100201005 153
97 3300017792 Ga0163161_10408776 Ga0163161_104087762 153
98 3300025907 Ga0207645_10013131 Ga0207645_100131312 153
99 3300025933 Ga0207706_10029992 Ga0207706_100299924 153
100 3300025934 Ga0207686_10280350 Ga0207686_102803503 153
101 3300025934 Ga0207686_10922278 Ga0207686_109222782 153
102 3300025942 Ga0207689_10302606 Ga0207689_103026061 153
103 3300025960 Ga0207651_10328510 Ga0207651_103285103 153
104 3300025972 Ga0207668_10895879 Ga0207668_108958792 153
105 3300026023 Ga0207677_10129508 Ga0207677_101295083 153
106 3300026089 Ga0207648_10401058 Ga0207648_104010581 153
107 3300046559 Ga0495667_0042647 Ga0495667_0042647_878_1393 153
108 3300005334 Ga0068869_100058198 Ga0068869_1000581984 154
109 3300005539 Ga0068853_100537705 Ga0068853_1005377052 154
110 3300005544 Ga0070686_100722961 Ga0070686_1007229611 154
111 3300005719 Ga0068861_100412765 Ga0068861_1004127653 154
112 3300009101 Ga0105247_10003381 Ga0105247_1000338113 154
113 3300009553 Ga0105249_10002193 Ga0105249_1000219313 154
114 3300013306 Ga0163162_10923735 Ga0163162_109237352 154
115 3300014325 Ga0163163_10527248 Ga0163163_105272481 154
116 3300014968 Ga0157379_10244990 Ga0157379_102449903 154
117 3300014968 Ga0157379_10583455 Ga0157379_105834551 154
118 3300025923 Ga0207681_10078161 Ga0207681_100781613 154
119 3300025942 Ga0207689_10099860 Ga0207689_100998603 154
120 3300025986 Ga0207658_10334110 Ga0207658_103341103 154
121 3300026116 Ga0207674_10451234 Ga0207674_104512343 154
122 3300028380 Ga0268265_10266748 Ga0268265_102667483 154
123 3300005618 Ga0068864_100024055 Ga0068864_1000240556 155
124 3300026116 Ga0207674_10174284 Ga0207674_101742844 155
125 3300028556 Ga0265337_1027032 Ga0265337_10270322 156
126 3300028563 Ga0265319_1008650 Ga0265319_10086505 156
127 3300028800 Ga0265338_10027171 Ga0265338_100271713 156
128 3300031240 Ga0265320_10115291 Ga0265320_101152912 156
129 3300031241 Ga0265325_10040465 Ga0265325_100404652 156
130 3300031595 Ga0265313_10033050 Ga0265313_100330502 156
131 3300031251 Ga0265327_10000600 Ga0265327_1000060033 157
132 3300005841 Ga0068863_100433070 Ga0068863_1004330701 158
133 3300026088 Ga0207641_10415733 Ga0207641_104157332 158
134 3300053096 Ga0500641_0101597 Ga0500641_0101597_324_845 159
135 3300000044 ARSoilOldRDRAFT_c006548 ARSoilOldRDRAFT_0065482 160
136 3300036401 Ga0373937_0729331 Ga0373937_0729331_360_896 160
137 3300046517 Ga0495630_0406285 Ga0495630_0406285_315_851 160
138 3300046533 Ga0495640_0184182 Ga0495640_0184182_61_597 160
139 3300046559 Ga0495667_0040934 Ga0495667_0040934_1739_2275 160
140 3300047322 Ga0495680_0474243 Ga0495680_0474243_298_834 160
141 3300047471 Ga0495684_0278499 Ga0495684_0278499_104_640 160
142 3300050512 nmdc:mga0n895_58110_c1 nmdc:mga0n895_58110_c1_2314_2865 160

Structural Annotation

Top 5 Hits

ID Description Score Start End
7cxr-assembly1.cif.gz_B cryo-em structure of human tmem120a/tacan 0.39 3 145
2q12-assembly1.cif.gz_A-2 crystal structure of bar domain of appl1 0.3575 3 142
7cxr-assembly1.cif.gz_B cryo-em structure of human tmem120a/tacan 0.3563 3 145
2z0n-assembly1.cif.gz_A-2 crystal structure of appl1-bar domain 0.3535 3 142
2q12-assembly1.cif.gz_A-2 crystal structure of bar domain of appl1 0.3167 3 142
ID Description Score Start End Superfamily
3k9aA00 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.7966 81 153 1.10.287.210
af_C6Y4A4_1_109_1.20.58.400 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;t-snare proteins 0.7311 74 139 1.20.58.400
3k9aA00 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.7114 81 153 1.10.287.210
af_P87157_220_318_1.20.58.160 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1; 0.6088 11 70 1.20.58.160
af_Q4V4P2_1_144_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.5881 46 143 1.20.140.150
ID Description Score Start End GO Terms
AF-A0A7U9KS59-F1-model_v4 Uncharacterized protein 0.9717 72 145 GO:0016020
AF-A0A7W1URA0-F1-model_v4 Uncharacterized protein 0.9438 50 145 GO:0016020
AF-A0A7U9KS59-F1-model_v4 Uncharacterized protein 0.9348 72 145 GO:0016020
AF-A0A7W1URA0-F1-model_v4 Uncharacterized protein 0.9165 50 145 GO:0016020
AF-A0A7V5CMC0-F1-model_v4 Uncharacterized protein 0.8949 36 147 GO:0016020

Feature Viewer

pLDDT pTM Quality
82.46 0.62 Medium
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Predicted Structure (AlphaFold2)

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