F188797

General Info

Members Datasets Scaffolds Average Seq Length
143 87 142 452

Family's Representative Sequence

Representative Sequence 3300014325|Ga0163163_10019067|Ga0163163_100190679
Length 469
Sequence LAAAVVLSHGGRMFDPVEKLKEFIRHQSISADSKYKDGMRGAQEFVATLLGSLGFDVEVVPTAMHPIIFAQRGGDPSWPHVVIYGHYDVQPADPLNLWKTPAFEPTLIGQRIYGRGAADNKGPLMANITAVGELLEENPNLPLRITFLIEGEEEMGSPSFPAFLESHGARLREADFVYLSDTMLPSPDQVVITCGLRGLTLFDVHVTGAKGDLHSGLHGGVLLNPIQALAEIIASLHTPEGKVNVPGFYDDVLDVHPWEREELKKFGGDEKAYKEFLGIDAFHTAPGFTPFEAVRFQPTLELNGIGGGYQGEGTKTVIPSEAFAKISCRLVPNQEPDKIKKLVIDAIRARTPKGVKVRFVDQHKGDPYVVVPPGRSNTPPDQSPILAAAFREADKAVTEIWGKPPLYLREGGSVPIIAQIKQVTGLDSILLGLFLPEDNLHAPNEGFSLEAMRRGTATAKRILAAVAKK

Samples

Sample ID Description Type Environment
1 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
11 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
12 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
13 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
14 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
15 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
16 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
17 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
18 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
19 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
20 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
21 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
22 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
23 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
24 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
25 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
26 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
27 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
37 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
38 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
39 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
40 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
41 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
42 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
43 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
44 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
45 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
46 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
47 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
48 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
49 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
50 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
51 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
52 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
53 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
54 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
55 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
56 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
57 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
58 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
59 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
60 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
61 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
62 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
63 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
64 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
65 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
66 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
67 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
69 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
70 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
78 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
79 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
80 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
81 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
82 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
83 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
84 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
86 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
87 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.3
Metatranscriptomes 0
Isolates 0.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.7
Nodule 0
Rhizoplane 4.2
Rhizosphere 90.21
Stem 0
Stem Tuber 0
Unclassified 4.9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10018703 3300003320 Bacteria 25661
2 rootL2_10088397 3300003322 Bacteria 6404
3 rootL2_10164619 3300003322 Bacteria 2234
4 rootL2_10203971 3300003322 Bacteria 4609
5 Ga0070683_100077123 3300005329 Bacteria 3116
6 Ga0070691_10074887 3300005341 Unclassified 1648
7 Ga0070671_100154872 3300005355 Bacteria 1936
8 Ga0070688_100083735 3300005365 Bacteria 2070
9 Ga0070659_100076148 3300005366 Bacteria 2676
10 Ga0070679_100051776 3300005530 Bacteria 4090
11 Ga0068853_100192227 3300005539 Unclassified 1855
12 Ga0070693_100030558 3300005547 Bacteria 2945
13 Ga0070664_100048776 3300005564 Bacteria 3579
14 Ga0068857_100011066 3300005577 Bacteria 7852
15 Ga0068857_100226259 3300005577 Bacteria 1710
16 Ga0068854_100108364 3300005578 Bacteria 2092
17 Ga0068866_10085239 3300005718 Bacteria 1707
18 Ga0070717_10004111 3300006028 Bacteria 10495
19 Ga0075434_100087594 3300006871 Bacteria 3115
20 Ga0068865_100038620 3300006881 Bacteria 3233
21 Ga0105240_10181148 3300009093 Bacteria 2486
22 Ga0105243_10079522 3300009148 Bacteria 2672
23 Ga0105242_10035231 3300009176 Bacteria 4014
24 Ga0105246_10228274 3300011119 Unclassified 1464
25 Ga0157378_10323562 3300013297 Bacteria 1499
26 Ga0157372_10131746 3300013307 Bacteria 2877
27 Ga0163163_10019067 3300014325 Bacteria 6436
28 Ga0157376_10197873 3300014969 Bacteria 1847
29 Ga0207662_10097487 3300025918 Unclassified 1817
30 Ga0207652_10037502 3300025921 Bacteria 4103
31 Ga0207652_10133689 3300025921 Unclassified 2214
32 Ga0207661_10035680 3300025944 Bacteria 3877
33 Ga0207640_10086772 3300025981 Bacteria 2156
34 Ga0207677_10091236 3300026023 Bacteria 2216
35 Ga0207708_10003490 3300026075 Bacteria 11596
36 Ga0207702_10000682 3300026078 Bacteria 36842
37 Ga0207648_10030390 3300026089 Unclassified 4785
38 Ga0207674_10062144 3300026116 Bacteria 3772
39 Ga0265337_1000555 3300028556 Bacteria 19734
40 Ga0265319_1000135 3300028563 Bacteria 54862
41 Ga0265319_1000374 3300028563 Bacteria 32370
42 Ga0265319_1003730 3300028563 Bacteria 7825
43 Ga0265319_1003827 3300028563 Bacteria 7706
44 Ga0265319_1004845 3300028563 Bacteria 6588
45 Ga0265319_1005040 3300028563 Bacteria 6424
46 Ga0265319_1036922 3300028563 Bacteria 1667
47 Ga0265334_10004654 3300028573 Bacteria 6057
48 Ga0265318_10000148 3300028577 Bacteria 63248
49 Ga0265318_10003620 3300028577 Bacteria 7721
50 Ga0265318_10005332 3300028577 Bacteria 6046
51 Ga0265318_10026295 3300028577 Bacteria 2292
52 Ga0265323_10000171 3300028653 Bacteria 38942
53 Ga0265323_10005454 3300028653 Bacteria 5401
54 Ga0265322_10000427 3300028654 Bacteria 17150
55 Ga0307515_10107652 3300028794 Bacteria 3293
56 Ga0265338_10000326 3300028800 Bacteria 86601
57 Ga0265338_10002999 3300028800 Bacteria 24420
58 Ga0265324_10002400 3300029957 Bacteria 9641
59 Ga0265330_10008276 3300031235 Bacteria 5012
60 Ga0265320_10000059 3300031240 Bacteria 102018
61 Ga0265320_10001002 3300031240 Bacteria 20988
62 Ga0265320_10003314 3300031240 Bacteria 10859
63 Ga0265320_10008652 3300031240 Bacteria 6208
64 Ga0265320_10009327 3300031240 Bacteria 5926
65 Ga0265320_10009738 3300031240 Bacteria 5766
66 Ga0265320_10010780 3300031240 Bacteria 5417
67 Ga0265320_10033739 3300031240 Bacteria 2610
68 Ga0265325_10014978 3300031241 Bacteria 4371
69 Ga0265327_10000016 3300031251 Bacteria 467439
70 Ga0265327_10009348 3300031251 Bacteria 7086
71 Ga0265316_10014325 3300031344 Bacteria 6987
72 Ga0265316_10047555 3300031344 Bacteria 3393
73 Ga0265316_10069738 3300031344 Bacteria 2713
74 Ga0265316_10076977 3300031344 Bacteria 2562
75 Ga0265313_10000174 3300031595 Bacteria 68230
76 Ga0265313_10002097 3300031595 Bacteria 17783
77 Ga0265313_10002328 3300031595 Bacteria 16654
78 Ga0265313_10002340 3300031595 Bacteria 16573
79 Ga0265313_10003316 3300031595 Bacteria 13173
80 Ga0265313_10010044 3300031595 Bacteria 6057
81 Ga0307508_10000160 3300031616 Bacteria 80743
82 Ga0265314_10003749 3300031711 Bacteria 14550
83 Ga0265314_10009006 3300031711 Bacteria 8489
84 Ga0265314_10052283 3300031711 Bacteria 2840
85 Ga0265342_10002108 3300031712 Bacteria 17547
86 Ga0265342_10003076 3300031712 Bacteria 13945
87 Ga0265342_10034553 3300031712 Bacteria 3101
88 Ga0265342_10041850 3300031712 Bacteria 2770
89 Ga0373951_0002778 3300035091 Bacteria 4373
90 Ga0395905_0000010 3300037471 Bacteria 460729
91 Ga0395901_0156355 3300038443 Bacteria 2395
92 Ga0451577_0000187 3300042876 Bacteria 131592
93 Ga0451577_0005996 3300042876 Bacteria 12237
94 Ga0451577_0143067 3300042876 Bacteria 2150
95 Ga0451577_0160588 3300042876 Bacteria 2024
96 Ga0453683_0004261 3300044673 Bacteria 10208
97 Ga0453684_0000001 3300044712 Bacteria 2623166
98 Ga0453684_0045338 3300044712 Bacteria 5868
99 Ga0453684_0065659 3300044712 Bacteria 4627
100 Ga0453684_0124388 3300044712 Bacteria 3107
101 Ga0453684_0260261 3300044712 Bacteria 1988
102 Ga0451576_0000162 3300045051 Bacteria 170196
103 Ga0451576_0008739 3300045051 Bacteria 11853
104 Ga0451576_0017660 3300045051 Bacteria 7840
105 Ga0451576_0019732 3300045051 Bacteria 7357
106 Ga0451576_0104608 3300045051 Bacteria 2945
107 Ga0451576_0166470 3300045051 Bacteria 2301
108 Ga0496100_0092370 3300048903 Bacteria 2068
109 Ga0496101_0052437 3300048904 Bacteria 2941
110 Ga0496108_0069163 3300048911 Bacteria 2979
111 Ga0496110_0190016 3300048913 Bacteria 1865
112 Ga0496113_0076423 3300048916 Bacteria 2558
113 Ga0496114_0090577 3300048917 Bacteria 2596
114 Ga0501031_0025694 3300049568 Bacteria 3841
115 Ga0501032_0000841 3300049569 Bacteria 24925
116 Ga0501032_0001206 3300049569 Bacteria 20671
117 Ga0501033_0002368 3300049570 Bacteria 16069
118 Ga0501033_0005843 3300049570 Bacteria 9678
119 Ga0501036_0006054 3300049572 Bacteria 9810
120 Ga0501037_0017886 3300049573 Bacteria 5218
121 Ga0501042_0010354 3300049578 Bacteria 6248
122 Ga0501043_0076704 3300049579 Bacteria 2626
123 Ga0501046_0000504 3300049580 Bacteria 39044
124 Ga0501046_0037421 3300049580 Bacteria 3899
125 Ga0501046_0113643 3300049580 Bacteria 2066
126 Ga0501047_0012700 3300049581 Bacteria 7979
127 Ga0501047_0084665 3300049581 Bacteria 3047
128 Ga0501047_0094731 3300049581 Bacteria 2864
129 Ga0501048_0010507 3300049582 Bacteria 6909
130 Ga0501067_0001203 3300049583 Bacteria 14058
131 Ga0501068_0001557 3300049584 Bacteria 12189
132 Ga0501069_0000042 3300049585 Bacteria 78244
133 Ga0501070_0036668 3300049586 Bacteria 4095
134 Ga0501243_000041 3300049675 Bacteria 11315
135 Ga0501080_0162245 3300049742 Bacteria 2064
136 Ga0501083_0004649 3300049744 Bacteria 9699
137 Ga0501035_0001155 3300049822 Bacteria 27552
138 Ga0501044_0001175 3300049823 Bacteria 31002
139 Ga0501044_0001684 3300049823 Bacteria 25975
140 Ga0501044_0003474 3300049823 Bacteria 17752
141 nmdc:mga0n895_18573_c1 3300050512 Bacteria 6438
142 Ga0500622_0014397 3300053156 Bacteria 4248

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053156 Ga0500622_0014397 Ga0500622_0014397_3129_4220 363
2 3300048917 Ga0496114_0090577 Ga0496114_0090577_1406_2569 385
3 3300031595 Ga0265313_10002328 Ga0265313_1000232810 430
4 3300031712 Ga0265342_10003076 Ga0265342_100030768 430
5 3300005341 Ga0070691_10074887 Ga0070691_100748872 436
6 3300005355 Ga0070671_100154872 Ga0070671_1001548721 436
7 3300005365 Ga0070688_100083735 Ga0070688_1000837352 436
8 3300005366 Ga0070659_100076148 Ga0070659_1000761483 436
9 3300005539 Ga0068853_100192227 Ga0068853_1001922272 436
10 3300005547 Ga0070693_100030558 Ga0070693_1000305582 436
11 3300005564 Ga0070664_100048776 Ga0070664_1000487763 436
12 3300005577 Ga0068857_100226259 Ga0068857_1002262592 436
13 3300005578 Ga0068854_100108364 Ga0068854_1001083642 436
14 3300005718 Ga0068866_10085239 Ga0068866_100852392 436
15 3300006871 Ga0075434_100087594 Ga0075434_1000875943 436
16 3300006881 Ga0068865_100038620 Ga0068865_1000386203 436
17 3300025918 Ga0207662_10097487 Ga0207662_100974871 436
18 3300025921 Ga0207652_10133689 Ga0207652_101336892 436
19 3300025981 Ga0207640_10086772 Ga0207640_100867722 436
20 3300026075 Ga0207708_10003490 Ga0207708_100034909 436
21 3300026089 Ga0207648_10030390 Ga0207648_100303901 436
22 3300009148 Ga0105243_10079522 Ga0105243_100795223 438
23 3300009176 Ga0105242_10035231 Ga0105242_100352313 438
24 3300011119 Ga0105246_10228274 Ga0105246_102282741 438
25 3300013297 Ga0157378_10323562 Ga0157378_103235622 438
26 3300013307 Ga0157372_10131746 Ga0157372_101317463 438
27 3300014969 Ga0157376_10197873 Ga0157376_101978732 438
28 3300048903 Ga0496100_0092370 Ga0496100_0092370_612_1934 438
29 3300048904 Ga0496101_0052437 Ga0496101_0052437_1096_2418 438
30 3300048911 Ga0496108_0069163 Ga0496108_0069163_1342_2664 438
31 3300048913 Ga0496110_0190016 Ga0496110_0190016_523_1845 438
32 3300048916 Ga0496113_0076423 Ga0496113_0076423_882_2204 438
33 3300049583 Ga0501067_0001203 Ga0501067_0001203_9355_10677 438
34 3300049584 Ga0501068_0001557 Ga0501068_0001557_10037_11359 438
35 3300049585 Ga0501069_0000042 Ga0501069_0000042_23828_25150 438
36 3300049586 Ga0501070_0036668 Ga0501070_0036668_2403_3725 438
37 3300050512 nmdc:mga0n895_18573_c1 nmdc:mga0n895_18573_c1_167_1489 438
38 3300038443 Ga0395901_0156355 Ga0395901_0156355_300_1679 442
39 iso_pu_bacteria 2786546940 2788437541 452
40 3300003322 rootL2_10164619 rootL2_101646191 454
41 3300003322 rootL2_10088397 rootL2_100883975 455
42 3300045051 Ga0451576_0166470 Ga0451576_0166470_135_1502 455
43 3300049744 Ga0501083_0004649 Ga0501083_0004649_1735_3105 455
44 3300003320 rootH2_10018703 rootH2_1001870315 456
45 3300003322 rootL2_10203971 rootL2_102039715 456
46 3300005329 Ga0070683_100077123 Ga0070683_1000771234 456
47 3300005530 Ga0070679_100051776 Ga0070679_1000517762 456
48 3300005577 Ga0068857_100011066 Ga0068857_1000110667 456
49 3300006028 Ga0070717_10004111 Ga0070717_100041112 456
50 3300009093 Ga0105240_10181148 Ga0105240_101811482 456
51 3300014325 Ga0163163_10019067 Ga0163163_100190679 456
52 3300025921 Ga0207652_10037502 Ga0207652_100375025 456
53 3300025944 Ga0207661_10035680 Ga0207661_100356801 456
54 3300026023 Ga0207677_10091236 Ga0207677_100912362 456
55 3300026078 Ga0207702_10000682 Ga0207702_1000068219 456
56 3300026116 Ga0207674_10062144 Ga0207674_100621441 456
57 3300028556 Ga0265337_1000555 Ga0265337_10005555 456
58 3300028563 Ga0265319_1000135 Ga0265319_100013547 456
59 3300028563 Ga0265319_1000374 Ga0265319_100037415 456
60 3300028563 Ga0265319_1003730 Ga0265319_10037305 456
61 3300028563 Ga0265319_1003827 Ga0265319_10038277 456
62 3300028563 Ga0265319_1004845 Ga0265319_10048454 456
63 3300028563 Ga0265319_1005040 Ga0265319_10050404 456
64 3300028563 Ga0265319_1036922 Ga0265319_10369222 456
65 3300028573 Ga0265334_10004654 Ga0265334_100046542 456
66 3300028577 Ga0265318_10000148 Ga0265318_1000014811 456
67 3300028577 Ga0265318_10003620 Ga0265318_100036205 456
68 3300028577 Ga0265318_10005332 Ga0265318_100053322 456
69 3300028577 Ga0265318_10026295 Ga0265318_100262952 456
70 3300028653 Ga0265323_10000171 Ga0265323_1000017111 456
71 3300028653 Ga0265323_10005454 Ga0265323_100054542 456
72 3300028654 Ga0265322_10000427 Ga0265322_1000042710 456
73 3300028794 Ga0307515_10107652 Ga0307515_101076523 456
74 3300028800 Ga0265338_10000326 Ga0265338_1000032636 456
75 3300028800 Ga0265338_10002999 Ga0265338_100029994 456
76 3300029957 Ga0265324_10002400 Ga0265324_100024005 456
77 3300031235 Ga0265330_10008276 Ga0265330_100082764 456
78 3300031240 Ga0265320_10000059 Ga0265320_1000005982 456
79 3300031240 Ga0265320_10001002 Ga0265320_1000100210 456
80 3300031240 Ga0265320_10003314 Ga0265320_100033147 456
81 3300031240 Ga0265320_10008652 Ga0265320_100086521 456
82 3300031240 Ga0265320_10009327 Ga0265320_100093276 456
83 3300031240 Ga0265320_10009738 Ga0265320_100097384 456
84 3300031240 Ga0265320_10010780 Ga0265320_100107805 456
85 3300031240 Ga0265320_10033739 Ga0265320_100337392 456
86 3300031241 Ga0265325_10014978 Ga0265325_100149782 456
87 3300031251 Ga0265327_10000016 Ga0265327_1000001648 456
88 3300031251 Ga0265327_10009348 Ga0265327_100093484 456
89 3300031344 Ga0265316_10014325 Ga0265316_100143256 456
90 3300031344 Ga0265316_10047555 Ga0265316_100475552 456
91 3300031344 Ga0265316_10069738 Ga0265316_100697382 456
92 3300031344 Ga0265316_10076977 Ga0265316_100769772 456
93 3300031595 Ga0265313_10000174 Ga0265313_1000017451 456
94 3300031595 Ga0265313_10002097 Ga0265313_100020972 456
95 3300031595 Ga0265313_10002340 Ga0265313_100023402 456
96 3300031595 Ga0265313_10003316 Ga0265313_100033166 456
97 3300031595 Ga0265313_10010044 Ga0265313_100100446 456
98 3300031616 Ga0307508_10000160 Ga0307508_100001607 456
99 3300031711 Ga0265314_10003749 Ga0265314_1000374913 456
100 3300031711 Ga0265314_10009006 Ga0265314_100090062 456
101 3300031711 Ga0265314_10052283 Ga0265314_100522832 456
102 3300031712 Ga0265342_10002108 Ga0265342_1000210813 456
103 3300031712 Ga0265342_10034553 Ga0265342_100345532 456
104 3300031712 Ga0265342_10041850 Ga0265342_100418501 456
105 3300035091 Ga0373951_0002778 Ga0373951_0002778_1311_2681 456
106 3300037471 Ga0395905_0000010 Ga0395905_0000010_403274_404650 456
107 3300042876 Ga0451577_0000187 Ga0451577_0000187_128705_130075 456
108 3300042876 Ga0451577_0005996 Ga0451577_0005996_8003_9379 456
109 3300042876 Ga0451577_0143067 Ga0451577_0143067_234_1604 456
110 3300042876 Ga0451577_0160588 Ga0451577_0160588_420_1796 456
111 3300044673 Ga0453683_0004261 Ga0453683_0004261_7357_8733 456
112 3300044712 Ga0453684_0000001 Ga0453684_0000001_2375913_2377283 456
113 3300044712 Ga0453684_0045338 Ga0453684_0045338_321_1697 456
114 3300044712 Ga0453684_0065659 Ga0453684_0065659_3092_4480 456
115 3300044712 Ga0453684_0124388 Ga0453684_0124388_133_1509 456
116 3300044712 Ga0453684_0260261 Ga0453684_0260261_229_1605 456
117 3300045051 Ga0451576_0000162 Ga0451576_0000162_115360_116736 456
118 3300045051 Ga0451576_0008739 Ga0451576_0008739_2082_3455 456
119 3300045051 Ga0451576_0017660 Ga0451576_0017660_4168_5544 456
120 3300045051 Ga0451576_0019732 Ga0451576_0019732_5253_6629 456
121 3300045051 Ga0451576_0104608 Ga0451576_0104608_864_2240 456
122 3300049568 Ga0501031_0025694 Ga0501031_0025694_1012_2385 456
123 3300049569 Ga0501032_0000841 Ga0501032_0000841_21822_23192 456
124 3300049569 Ga0501032_0001206 Ga0501032_0001206_5998_7371 456
125 3300049570 Ga0501033_0002368 Ga0501033_0002368_10811_12184 456
126 3300049570 Ga0501033_0005843 Ga0501033_0005843_892_2265 456
127 3300049572 Ga0501036_0006054 Ga0501036_0006054_1719_3092 456
128 3300049573 Ga0501037_0017886 Ga0501037_0017886_2818_4191 456
129 3300049578 Ga0501042_0010354 Ga0501042_0010354_4618_5991 456
130 3300049579 Ga0501043_0076704 Ga0501043_0076704_78_1451 456
131 3300049580 Ga0501046_0000504 Ga0501046_0000504_411_1784 456
132 3300049580 Ga0501046_0037421 Ga0501046_0037421_1392_2765 456
133 3300049580 Ga0501046_0113643 Ga0501046_0113643_390_1763 456
134 3300049581 Ga0501047_0012700 Ga0501047_0012700_5008_6381 456
135 3300049581 Ga0501047_0084665 Ga0501047_0084665_1016_2389 456
136 3300049581 Ga0501047_0094731 Ga0501047_0094731_1258_2628 456
137 3300049582 Ga0501048_0010507 Ga0501048_0010507_5490_6863 456
138 3300049675 Ga0501243_000041 Ga0501243_000041_1157_2530 456
139 3300049742 Ga0501080_0162245 Ga0501080_0162245_303_1676 456
140 3300049822 Ga0501035_0001155 Ga0501035_0001155_2037_3407 456
141 3300049823 Ga0501044_0001175 Ga0501044_0001175_24321_25691 456
142 3300049823 Ga0501044_0001684 Ga0501044_0001684_9310_10683 456
143 3300049823 Ga0501044_0003474 Ga0501044_0003474_3148_4521 456

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07687

M20_dimer

Peptidase dimerisation domain

194

355

0.92

PF01546

Peptidase_M20

Peptidase family M20/M25/M40

82

465

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4mmo-assembly1.cif.gz_A the crystal structure of a m20 family metallo-carboxypeptidase sso-cp2 from sulfolobus solfataricus 0.9103 1 456
4mmo-assembly1.cif.gz_A the crystal structure of a m20 family metallo-carboxypeptidase sso-cp2 from sulfolobus solfataricus 0.9083 1 456
2pok-assembly1.cif.gz_B crystal structure of a m20 family metallo peptidase from streptococcus pneumoniae 0.8949 4 453
5vo3-assembly1.cif.gz_A-2 crystal structure of dape in complex with the products (succinic acid and diaminopimelic acid) 0.8769 4 452
2zof-assembly1.cif.gz_B crystal structure of mouse carnosinase cn2 complexed with mn and bestatin 0.8693 4 456
ID Description Score Start End Superfamily
af_P0AED7_3_244_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8967 4 166 3.40.630.10
2pokB02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8921 185 353 3.30.70.360
4mmoA01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8918 1 456 3.40.630.10
4mmoA01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8886 1 456 3.40.630.10
2pokB02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8775 185 353 3.30.70.360
ID Description Score Start End GO Terms
AF-A0A3C1U3P0-F1-model_v4 Peptidase M20 0.9706 4 152 GO:0016787
AF-A0A7X9HR06-F1-model_v4 Dipeptidase 0.9699 93 456 GO:0016787
AF-A0A1Z9KK64-F1-model_v4 deleted 0.968 4 456
AF-A0A3D4YRV1-F1-model_v4 Dipeptidase 0.9659 4 336 GO:0016787
AF-A0A2D8I0F2-F1-model_v4 Peptidase M20 0.9649 1 453 GO:0016787

Feature Viewer

pLDDT pTM Quality
93.24 0.9 High
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Predicted Structure (AlphaFold2)

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