F188922

General Info

Members Datasets Scaffolds Average Seq Length
143 104 286 179

Family's Representative Sequence

Representative Sequence 3300025914|Ga0207671_10005128|Ga0207671_100051283
Length 204
Sequence MSDFEVLRNSLFKIRCSIFLFKAFTMTFNSTILIHPGLGNSGPAHWQSLWEKQFNFVRIEQQDWETPVCNDWITTLNGYVQQYDPKNVILVGHSLACSTIVYWAQQYNVNIKGALLVAPSDTEADTYPPGTTGFTPVPLIKLPFKSITVASSNDYYVTSERARLFANSWGSELVEIGDAGHINLASGFGEWPQGLELLKQLDNL

Samples

Sample ID Description Type Environment
1 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
6 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
7 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
10 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
16 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
17 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
18 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
19 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
20 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
21 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
22 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
23 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
24 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
25 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
26 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
27 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
28 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
29 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
30 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
31 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
32 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
38 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
39 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
40 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
41 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
42 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
43 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
44 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
45 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
46 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
47 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
48 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
49 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
50 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
51 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
52 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
53 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
54 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
55 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
56 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
57 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
58 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
59 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
60 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
61 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
62 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
63 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
64 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
65 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
66 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
67 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
68 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
69 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
70 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
71 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
72 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
73 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
74 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
75 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
76 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
77 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
78 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
79 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
80 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
81 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
82 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
83 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
84 3300049658 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_B_0_drought Metagenome Rhizosphere
85 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
86 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
87 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
88 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
89 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
90 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
91 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
92 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
93 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
94 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
95 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
96 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
97 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
98 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
99 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
100 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
101 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
102 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
103 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
104 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.71
Metatranscriptomes 0
Isolates 6.29

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.99
Nodule 0
Rhizoplane 0.7
Rhizosphere 66.43
Stem 0
Stem Tuber 0
Unclassified 11.19

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207671_10005128 3300025914 Bacteria 12204
2 JGI24739J22299_10014336 3300001989 Bacteria 2884
3 JGI24739J22299_10022067 3300001989 Bacteria 2261
4 JGI24739J22299_10039671 3300001989 Bacteria 1576
5 JGI24737J22298_10001220 3300001990 Bacteria 9062
6 JGI24735J21928_10000003 3300002067 Bacteria 385983
7 JGI25162J39368_1000203 3300002737 Bacteria 62704
8 JGI25158J39367_1004037 3300002739 Bacteria 2220
9 rootH1_10019542 3300003316 Bacteria 4118
10 rootH1_10174960 3300003316 Bacteria 1165
11 rootH2_10306714 3300003320 Unclassified 1247
12 rootH2_10311202 3300003320 Bacteria 1065
13 rootL2_10061389 3300003322 Bacteria 1942
14 rootL2_10105703 3300003322 Bacteria 5467
15 rootL2_10230312 3300003322 Bacteria 1643
16 rootL2_10254125 3300003322 Bacteria 1465
17 rootH1_10092642 3300003323 Bacteria 3798
18 rootH1_10187823 3300003323 Bacteria 2576
19 rootH1_10206327 3300003323 Unclassified 1792
20 rootH1_10305396 3300003323 Bacteria 1378
21 Ga0068869_101251946 3300005334 Bacteria 653
22 Ga0070659_100000409 3300005366 Bacteria 32536
23 Ga0070678_100561556 3300005456 Bacteria 1014
24 Ga0068855_100011393 3300005563 Bacteria 10738
25 Ga0068855_100149708 3300005563 Bacteria 2654
26 Ga0068855_100499435 3300005563 Bacteria 1322
27 Ga0075366_10000116 3300006195 Bacteria 32774
28 Ga0075366_10015970 3300006195 Bacteria 4311
29 Ga0075370_10387701 3300006353 Unclassified 837
30 Ga0105240_10616496 3300009093 Bacteria 1193
31 Ga0105237_10057931 3300009545 Bacteria 3877
32 Ga0105237_10089019 3300009545 Bacteria 3076
33 Ga0105237_11425017 3300009545 Bacteria 699
34 Ga0105239_10001867 3300010375 Bacteria 27574
35 Ga0105239_10013613 3300010375 Bacteria 9031
36 Ga0105239_10245754 3300010375 Bacteria 2009
37 Ga0157373_10545518 3300013100 Unclassified 840
38 Ga0157371_10011753 3300013102 Bacteria 6727
39 Ga0157369_10278594 3300013105 Bacteria 1742
40 Ga0163162_10172628 3300013306 Bacteria 2287
41 Ga0163162_11144240 3300013306 Bacteria 882
42 Ga0157372_10055794 3300013307 Bacteria 4413
43 Ga0163161_10206827 3300017792 Bacteria 1514
44 Ga0209436_104395 3300025208 Unclassified 3493
45 Ga0209437_100102 3300025233 Bacteria 224216
46 Ga0209026_1008068 3300025250 Bacteria 2256
47 Ga0209130_1005573 3300025284 Bacteria 4323
48 Ga0209050_1003134 3300025298 Bacteria 12625
49 Ga0207426_1000154 3300025302 Bacteria 179701
50 Ga0209257_1028295 3300025304 Bacteria 1847
51 Ga0207695_10342002 3300025913 Bacteria 1384
52 Ga0207671_10032983 3300025914 Bacteria 3854
53 Ga0207657_10096695 3300025919 Unclassified 2456
54 Ga0207690_10000317 3300025932 Bacteria 32562
55 Ga0207667_10023537 3300025949 Bacteria 6781
56 Ga0207667_10166845 3300025949 Bacteria 2264
57 Ga0307515_10000007 3300028794 Bacteria 719669
58 Ga0307515_10000316 3300028794 Bacteria 119243
59 Ga0307515_10000782 3300028794 Bacteria 73268
60 Ga0265338_10163806 3300028800 Bacteria 1714
61 Ga0316177_1101431 3300030731 Bacteria 992
62 Ga0265327_10000051 3300031251 Bacteria 257963
63 Ga0265316_10251131 3300031344 Bacteria 1299
64 Ga0307513_10243152 3300031456 Bacteria 1603
65 Ga0307513_10270394 3300031456 Bacteria 1483
66 Ga0307509_10574880 3300031507 Bacteria 802
67 Ga0307514_10116227 3300031649 Bacteria 1880
68 Ga0307516_10478109 3300031730 Bacteria 901
69 Ga0307411_10987743 3300032005 Unclassified 753
70 Ga0307507_10000099 3300033179 Bacteria 139532
71 Ga0439445_0052292 3300042004 Unclassified 1105
72 Ga0439432_068975 3300042006 Unclassified 1080
73 Ga0439449_0116241 3300042007 Bacteria 992
74 Ga0439457_064603 3300042014 Unclassified 831
75 Ga0495638_0000008 3300046460 Bacteria 565643
76 Ga0495651_0215406 3300046462 Bacteria 1333
77 Ga0495650_0000107 3300046471 Bacteria 200864
78 Ga0495650_0080833 3300046471 Unclassified 1253
79 Ga0495605_0036396 3300046474 Bacteria 2482
80 Ga0495585_0000116 3300046492 Bacteria 86272
81 Ga0495585_0000170 3300046492 Bacteria 70224
82 Ga0495607_0000327 3300046501 Bacteria 49278
83 Ga0495606_0000303 3300046507 Bacteria 84874
84 Ga0495610_0007870 3300046512 Bacteria 7004
85 Ga0495616_0002915 3300046513 Bacteria 11153
86 Ga0495616_0003081 3300046513 Bacteria 10796
87 Ga0495616_0225572 3300046513 Bacteria 814
88 Ga0495628_0147799 3300046516 Bacteria 1791
89 Ga0495644_0073080 3300046523 Unclassified 1290
90 Ga0495648_0037359 3300046524 Bacteria 3121
91 Ga0495654_0133909 3300046530 Bacteria 1110
92 Ga0495609_0001895 3300046538 Bacteria 13334
93 Ga0495633_0000593 3300046558 Bacteria 35033
94 Ga0495633_0014082 3300046558 Bacteria 4193
95 Ga0495668_0000011 3300046616 Bacteria 472186
96 Ga0495668_0059022 3300046616 Bacteria 2117
97 Ga0495668_0255171 3300046616 Unclassified 960
98 Ga0495625_0000021 3300046660 Bacteria 282133
99 Ga0495625_0000344 3300046660 Bacteria 71298
100 Ga0495625_0001450 3300046660 Bacteria 28784
101 Ga0495625_0024013 3300046660 Bacteria 4648
102 Ga0495625_0061304 3300046660 Bacteria 2662
103 Ga0495625_0063134 3300046660 Bacteria 2616
104 Ga0495661_0007139 3300046665 Bacteria 7799
105 Ga0495661_0032050 3300046665 Bacteria 3326
106 Ga0495658_0002275 3300046683 Bacteria 9698
107 Ga0495671_0011880 3300046692 Bacteria 4773
108 Ga0495671_0035708 3300046692 Bacteria 2523
109 Ga0495649_0000009 3300046694 Bacteria 451725
110 Ga0495649_0042941 3300046694 Unclassified 2469
111 Ga0495600_0091283 3300046809 Bacteria 1987
112 Ga0495672_0045479 3300047320 Bacteria 2626
113 Ga0495683_0013638 3300047323 Bacteria 4247
114 Ga0495687_069294 3300047443 Bacteria 1420
115 Ga0495677_0048134 3300047445 Unclassified 1566
116 Ga0495673_0023737 3300047469 Bacteria 2977
117 Ga0495681_0096425 3300047470 Bacteria 1299
118 Ga0495686_0000107 3300047472 Bacteria 174386
119 Ga0495614_0076760 3300048089 Bacteria 1444
120 Ga0495682_0010532 3300049460 Bacteria 3578
121 Ga0501300_000640 3300049523 Bacteria 5254
122 Ga0501211_008501 3300049658 Bacteria 1003
123 Ga0501217_019161 3300049661 Bacteria 1595
124 Ga0501257_013098 3300049686 Bacteria 1899
125 Ga0501044_0372128 3300049823 Bacteria 1345
126 nmdc:mga0k408_38050_c1 3300050493 Bacteria 2762
127 nmdc:mga0k408_534_c1 3300050493 Bacteria 20938
128 nmdc:mga07m45_403721_c1 3300050496 Unclassified 793
129 Ga0500557_006316 3300053105 Bacteria 2673
130 Ga0500608_000834 3300053122 Bacteria 11145
131 Ga0500614_006733 3300053123 Bacteria 2417
132 Ga0500618_018397 3300053125 Bacteria 1729
133 Ga0500616_0000003 3300053153 Bacteria 1220687
134 Ga0500624_000265 3300053157 Bacteria 18286
135 2599479700 2599185184 Bacteria 6430550
136 2819678938 2818991460 Bacteria 7595395
137 2884792040 2884791551 Bacteria 8511252
138 2919440251 2919437846 Bacteria 6199444
139 2928083745 2928078545 Bacteria 6534839
140 2928152186 2928147474 Bacteria 6512076
141 2929181979 2929177148 Bacteria 7883697
142 2945977918 2945977869 Bacteria 7777518
143 2946016229 2946013367 Bacteria 7766675
144 Ga0207671_10005128
145 JGI24739J22299_10014336
146 JGI24739J22299_10022067
147 JGI24739J22299_10039671
148 JGI24737J22298_10001220
149 JGI24735J21928_10000003
150 JGI25162J39368_1000203
151 JGI25158J39367_1004037
152 rootH1_10019542
153 rootH1_10174960
154 rootH2_10306714
155 rootH2_10311202
156 rootL2_10061389
157 rootL2_10105703
158 rootL2_10230312
159 rootL2_10254125
160 rootH1_10092642
161 rootH1_10187823
162 rootH1_10206327
163 rootH1_10305396
164 Ga0068869_101251946
165 Ga0070659_100000409
166 Ga0070678_100561556
167 Ga0068855_100011393
168 Ga0068855_100149708
169 Ga0068855_100499435
170 Ga0075366_10000116
171 Ga0075366_10015970
172 Ga0075370_10387701
173 Ga0105240_10616496
174 Ga0105237_10057931
175 Ga0105237_10089019
176 Ga0105237_11425017
177 Ga0105239_10001867
178 Ga0105239_10013613
179 Ga0105239_10245754
180 Ga0157373_10545518
181 Ga0157371_10011753
182 Ga0157369_10278594
183 Ga0163162_10172628
184 Ga0163162_11144240
185 Ga0157372_10055794
186 Ga0163161_10206827
187 Ga0209436_104395
188 Ga0209437_100102
189 Ga0209026_1008068
190 Ga0209130_1005573
191 Ga0209050_1003134
192 Ga0207426_1000154
193 Ga0209257_1028295
194 Ga0207695_10342002
195 Ga0207671_10032983
196 Ga0207657_10096695
197 Ga0207690_10000317
198 Ga0207667_10023537
199 Ga0207667_10166845
200 Ga0307515_10000007
201 Ga0307515_10000316
202 Ga0307515_10000782
203 Ga0265338_10163806
204 Ga0316177_1101431
205 Ga0265327_10000051
206 Ga0265316_10251131
207 Ga0307513_10243152
208 Ga0307513_10270394
209 Ga0307509_10574880
210 Ga0307514_10116227
211 Ga0307516_10478109
212 Ga0307411_10987743
213 Ga0307507_10000099
214 Ga0439445_0052292
215 Ga0439432_068975
216 Ga0439449_0116241
217 Ga0439457_064603
218 Ga0495638_0000008
219 Ga0495651_0215406
220 Ga0495650_0000107
221 Ga0495650_0080833
222 Ga0495605_0036396
223 Ga0495585_0000116
224 Ga0495585_0000170
225 Ga0495607_0000327
226 Ga0495606_0000303
227 Ga0495610_0007870
228 Ga0495616_0002915
229 Ga0495616_0003081
230 Ga0495616_0225572
231 Ga0495628_0147799
232 Ga0495644_0073080
233 Ga0495648_0037359
234 Ga0495654_0133909
235 Ga0495609_0001895
236 Ga0495633_0000593
237 Ga0495633_0014082
238 Ga0495668_0000011
239 Ga0495668_0059022
240 Ga0495668_0255171
241 Ga0495625_0000021
242 Ga0495625_0000344
243 Ga0495625_0001450
244 Ga0495625_0024013
245 Ga0495625_0061304
246 Ga0495625_0063134
247 Ga0495661_0007139
248 Ga0495661_0032050
249 Ga0495658_0002275
250 Ga0495671_0011880
251 Ga0495671_0035708
252 Ga0495649_0000009
253 Ga0495649_0042941
254 Ga0495600_0091283
255 Ga0495672_0045479
256 Ga0495683_0013638
257 Ga0495687_069294
258 Ga0495677_0048134
259 Ga0495673_0023737
260 Ga0495681_0096425
261 Ga0495686_0000107
262 Ga0495614_0076760
263 Ga0495682_0010532
264 Ga0501300_000640
265 Ga0501211_008501
266 Ga0501217_019161
267 Ga0501257_013098
268 Ga0501044_0372128
269 nmdc:mga0k408_38050_c1
270 nmdc:mga0k408_534_c1
271 nmdc:mga07m45_403721_c1
272 Ga0500557_006316
273 Ga0500608_000834
274 Ga0500614_006733
275 Ga0500618_018397
276 Ga0500616_0000003
277 Ga0500624_000265
278 2599479700
279 2819678938
280 2884792040
281 2919440251
282 2928083745
283 2928152186
284 2929181979
285 2945977918
286 2946016229

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06821

Ser_hydrolase

Serine hydrolase

32

200

0.96

PF00561

Abhydrolase_1

alpha/beta hydrolase fold

15

134

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
3bdv-assembly2.cif.gz_B crystal structure of a putative yden-like hydrolase (eca3091) from pectobacterium atrosepticum scri1043 at 1.66 a resolution 0.9057 7 178
1uxo-assembly1.cif.gz_A the crystal structure of the yden gene product from b. subtilis 0.864 4 176
3bdv-assembly2.cif.gz_B crystal structure of a putative yden-like hydrolase (eca3091) from pectobacterium atrosepticum scri1043 at 1.66 a resolution 0.8332 7 178
1uxo-assembly1.cif.gz_A the crystal structure of the yden gene product from b. subtilis 0.8282 4 176
6qe2-assembly2.cif.gz_B crystal structure of paleococcus ferrophilus monoacylglycerol lipase. 0.74 2 180
ID Description Score Start End Superfamily
3bdvB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8906 6 178 3.40.50.1820
1uxoA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8506 4 176 3.40.50.1820
af_Q2FXA7_2_184_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8188 5 178 3.40.50.1820
1uxoA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.816 4 176 3.40.50.1820
3bdvB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8152 6 178 3.40.50.1820
ID Description Score Start End GO Terms
AF-A0A1H0WTA5-F1-model_v4 Alpha/beta hydrolase 1.002 1 177 GO:0016787
AF-A0A1N7DZE4-F1-model_v4 deleted 1.002 1 177
AF-A0A562TUB1-F1-model_v4 Alpha/beta hydrolase 1.001 1 177 GO:0016787
AF-I0KEI3-F1-model_v4 Alpha/beta hydrolase 0.9957 3 177 GO:0016787
AF-A0A562TUB1-F1-model_v4 Alpha/beta hydrolase 0.9955 1 177 GO:0016787

Map