F189745

General Info

Members Datasets Scaffolds Average Seq Length
143 118 286 217

Family's Representative Sequence

Representative Sequence 3300046660|Ga0495625_0072317|Ga0495625_0072317_86_838
Length 250
Sequence MPIAPKNSALAMPNGTGRRCWPSNAAKRMSVPSFARAMAEAPILYSFRRCPYAMRARMALLASGIDCEIREIVLRDKPETMIAASPKATVPVLVLPDGRVIDESLDIMRWALAQNDPEQWLADSADGEALIAANDGPFKHHLDRYKYPGRHASDPIVHRAAAIVLLKALEARLDMAAYLCGSACSLADVAIMPFVRQFAAVDPAWFGLQPLPALRNWLARLAGAPLFDRAMARLAIWQPGDRPTLLSELG

Samples

Sample ID Description Type Environment
1 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
2 3300001976 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 Metagenome Rhizosphere
3 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
4 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
5 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
20 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
24 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
25 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
26 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
27 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
28 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
29 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
30 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
31 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
32 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
33 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
34 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
49 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
52 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
53 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
54 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
55 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
56 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
57 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
58 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
59 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
60 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
61 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
62 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
63 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
64 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
65 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
66 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
67 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
68 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
69 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
70 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
71 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
72 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
73 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
74 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
75 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
76 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
77 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
78 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
79 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
80 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
81 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
82 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
83 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
84 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
85 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
86 3300049676 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G12_A_3_control Metagenome Rhizosphere
87 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
88 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
89 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
90 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
91 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
92 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
93 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
94 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
95 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
96 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
97 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
98 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
99 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
100 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
101 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
102 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
103 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
104 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
105 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
106 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
107 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
108 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
109 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
110 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
111 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
112 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
113 2643221605 Sphingomonas sp. Root710 Isolate Unclassified
114 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
115 2808606401 Sphingobium sp. AEW010 Isolate Rhizosphere
116 2946787523 Sphingomonas faeni W4I17 Isolate Rhizosphere
117 3002141150 Phyllobacterium sp. 628 Isolate Unclassified
118 8002392321 Alcaligenes faecalis Mc250 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.8
Metatranscriptomes 0
Isolates 4.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 22.38
Nodule 0
Rhizoplane 2.1
Rhizosphere 61.54
Stem 0
Stem Tuber 0
Unclassified 0.7

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495625_0072317 3300046660 Bacteria 2419
2 JGI24752J21851_1000160 3300001976 Bacteria 9211
3 Ga0055531_10049806 3300003794 Bacteria 1116
4 Ga0065165_1002965 3300005262 Bacteria 12906
5 Ga0065714_10202247 3300005288 Bacteria 891
6 Ga0065704_10076185 3300005289 Bacteria 5229
7 Ga0070658_10165971 3300005327 Bacteria 1854
8 Ga0070658_10652496 3300005327 Bacteria 913
9 Ga0070670_100000014 3300005331 Bacteria 234648
10 Ga0070660_100258598 3300005339 Bacteria 1421
11 Ga0070661_100246527 3300005344 Bacteria 1377
12 Ga0070671_100012219 3300005355 Bacteria 6908
13 Ga0070671_100143262 3300005355 Bacteria 2017
14 Ga0070674_100042164 3300005356 Bacteria 3098
15 Ga0070667_100000144 3300005367 Bacteria 89681
16 Ga0070667_100001044 3300005367 Bacteria 25254
17 Ga0070667_100050056 3300005367 Bacteria 3520
18 Ga0070662_100831469 3300005457 Bacteria 786
19 Ga0070665_100865237 3300005548 Bacteria 917
20 Ga0068854_100001374 3300005578 Bacteria 14643
21 Ga0068856_100028648 3300005614 Bacteria 5441
22 Ga0068864_100000021 3300005618 Bacteria 262378
23 Ga0068863_100000009 3300005841 Bacteria 250538
24 Ga0068863_100002111 3300005841 Bacteria 19717
25 Ga0068863_100008391 3300005841 Bacteria 10088
26 Ga0068858_100346081 3300005842 Bacteria 1423
27 Ga0068860_100078316 3300005843 Bacteria 3143
28 Ga0068862_100000017 3300005844 Bacteria 247616
29 Ga0075368_10000070 3300006042 Bacteria 24269
30 Ga0075363_100001786 3300006048 Bacteria 8421
31 Ga0075367_10000247 3300006178 Bacteria 18374
32 Ga0105251_10000507 3300009011 Bacteria 36839
33 Ga0105247_10021311 3300009101 Bacteria 3900
34 Ga0105243_10071568 3300009148 Bacteria 2804
35 Ga0105248_10000030 3300009177 Bacteria 206609
36 Ga0105248_10001125 3300009177 Bacteria 29737
37 Ga0105249_10000137 3300009553 Bacteria 95985
38 Ga0105246_10085092 3300011119 Bacteria 2264
39 Ga0163163_10209325 3300014325 Bacteria 1999
40 Ga0157379_10041703 3300014968 Bacteria 4097
41 Ga0209257_1009954 3300025304 Bacteria 4940
42 Ga0207713_1027687 3300025735 Bacteria 2570
43 Ga0207645_10217783 3300025907 Bacteria 1258
44 Ga0207705_10000084 3300025909 Bacteria 116809
45 Ga0207649_10142926 3300025920 Bacteria 1640
46 Ga0207650_10000095 3300025925 Bacteria 116052
47 Ga0207644_10137424 3300025931 Bacteria 1878
48 Ga0207669_10021542 3300025937 Bacteria 3405
49 Ga0207711_10000029 3300025941 Bacteria 206826
50 Ga0207711_10007265 3300025941 Bacteria 9282
51 Ga0207712_10000734 3300025961 Bacteria 24952
52 Ga0207712_10045557 3300025961 Bacteria 3037
53 Ga0207658_10000995 3300025986 Bacteria 23248
54 Ga0207658_10001866 3300025986 Bacteria 15789
55 Ga0207702_10020749 3300026078 Bacteria 5434
56 Ga0207641_10000017 3300026088 Bacteria 299119
57 Ga0207641_10002967 3300026088 Bacteria 15351
58 Ga0207641_10007009 3300026088 Bacteria 9422
59 Ga0207676_10000037 3300026095 Bacteria 180826
60 Ga0209813_10000031 3300027866 Bacteria 65084
61 Ga0268265_10000025 3300028380 Bacteria 250207
62 Ga0268264_10279624 3300028381 Bacteria 1563
63 Ga0307513_10412112 3300031456 Bacteria 1083
64 Ga0307408_100039159 3300031548 Bacteria 3349
65 Ga0316575_10001621 3300031665 Bacteria 7338
66 Ga0307516_10000136 3300031730 Bacteria 87938
67 Ga0307412_10000122 3300031911 Bacteria 59264
68 Ga0307412_10005285 3300031911 Bacteria 7246
69 Ga0307412_10009228 3300031911 Bacteria 5654
70 Ga0307412_10054387 3300031911 Bacteria 2657
71 Ga0307414_10585861 3300032004 Bacteria 999
72 Ga0316584_0197442 3300036712 Unclassified 1486
73 Ga0395900_0056884 3300037418 Bacteria 4026
74 Ga0395898_0262342 3300037466 Bacteria 1648
75 Ga0400483_257217 3300039062 Bacteria 8000
76 Ga0451807_0335378 3300041486 Bacteria 978
77 Ga0451849_1542000 3300041505 Bacteria 1163
78 Ga0495639_0029594 3300046475 Bacteria 2431
79 Ga0495608_0070023 3300046511 Bacteria 2290
80 Ga0495610_0000136 3300046512 Bacteria 82060
81 Ga0495637_0092635 3300046520 Bacteria 1190
82 Ga0495643_0000107 3300046522 Bacteria 138292
83 Ga0495643_0035930 3300046522 Bacteria 2725
84 Ga0495642_0082098 3300046528 Bacteria 1359
85 Ga0495609_0058286 3300046538 Bacteria 1708
86 Ga0495621_0084381 3300046539 Bacteria 1189
87 Ga0495597_0019378 3300046542 Bacteria 3185
88 Ga0495625_0002025 3300046660 Bacteria 22827
89 Ga0495681_0124119 3300047470 Bacteria 1105
90 Ga0495686_0000057 3300047472 Bacteria 250088
91 Ga0495686_0017706 3300047472 Bacteria 4795
92 Ga0495615_0109934 3300048090 Bacteria 787
93 Ga0496103_0025332 3300048906 Bacteria 3585
94 Ga0496106_0037031 3300048909 Bacteria 3649
95 Ga0496117_0005000 3300048920 Bacteria 14220
96 Ga0496117_0013234 3300048920 Bacteria 7211
97 Ga0496118_0000216 3300048921 Bacteria 100502
98 Ga0496120_0088643 3300048923 Bacteria 1658
99 Ga0496121_0010433 3300048924 Bacteria 10481
100 Ga0496121_0014736 3300048924 Bacteria 8259
101 Ga0496121_0092350 3300048924 Bacteria 2360
102 Ga0496121_0191921 3300048924 Bacteria 1464
103 Ga0496122_0010203 3300048925 Bacteria 9734
104 Ga0496123_0102218 3300048926 Bacteria 1664
105 Ga0496124_0133052 3300048927 Bacteria 1973
106 Ga0496125_0012040 3300048928 Bacteria 8611
107 Ga0496125_0015789 3300048928 Bacteria 7277
108 Ga0501223_000054 3300049663 Bacteria 38195
109 Ga0501246_000569 3300049676 Bacteria 2694
110 Ga0501257_000083 3300049686 Bacteria 23257
111 Ga0501225_0000004 3300049705 Bacteria 140738
112 Ga0501280_000804 3300049776 Bacteria 6823
113 nmdc:mga0k408_87239_c1 3300050493 Bacteria 1832
114 nmdc:mga06z11_83_c1 3300050494 Bacteria 40158
115 nmdc:mga04h51_17_c1 3300050495 Bacteria 75055
116 nmdc:mga07m45_52074_c1 3300050496 Bacteria 2310
117 Ga0500635_0000140 3300053080 Bacteria 41240
118 Ga0500578_0138573 3300053086 Bacteria 1522
119 Ga0500643_001612 3300053087 Bacteria 12627
120 Ga0500651_0004358 3300053093 Bacteria 7910
121 Ga0500641_0009386 3300053096 Bacteria 3519
122 Ga0500592_016978 3300053116 Bacteria 1169
123 Ga0500614_003318 3300053123 Bacteria 3474
124 Ga0500642_0000626 3300053130 Bacteria 10542
125 Ga0500655_000017 3300053133 Bacteria 46539
126 Ga0500655_003068 3300053133 Bacteria 3030
127 Ga0500559_0110018 3300053136 Bacteria 1276
128 Ga0500573_0000022 3300053140 Bacteria 154562
129 Ga0500577_0014622 3300053142 Bacteria 2431
130 Ga0500577_0056971 3300053142 Bacteria 1490
131 Ga0500590_000414 3300053148 Bacteria 14377
132 Ga0500616_0078321 3300053153 Bacteria 1667
133 Ga0500639_009529 3300053163 Bacteria 5078
134 Ga0500636_0123406 3300053177 Bacteria 1451
135 Ga0500570_000317 3300053724 Bacteria 17251
136 Ga0500645_003273 3300053730 Bacteria 6679
137 Ga0500587_011757 3300053739 Bacteria 1105
138 2644039284 2643221605 Bacteria 4772303
139 2753764400 2751185897 Bacteria 5322941
140 2809062708 2808606401 Bacteria 4586670
141 2946788586 2946787523 Bacteria 4366789
142 3002142283 3002141150 Bacteria 5254435
143 8002395485 8002392321 Bacteria 4159911
144 Ga0495625_0072317
145 JGI24752J21851_1000160
146 Ga0055531_10049806
147 Ga0065165_1002965
148 Ga0065714_10202247
149 Ga0065704_10076185
150 Ga0070658_10165971
151 Ga0070658_10652496
152 Ga0070670_100000014
153 Ga0070660_100258598
154 Ga0070661_100246527
155 Ga0070671_100012219
156 Ga0070671_100143262
157 Ga0070674_100042164
158 Ga0070667_100000144
159 Ga0070667_100001044
160 Ga0070667_100050056
161 Ga0070662_100831469
162 Ga0070665_100865237
163 Ga0068854_100001374
164 Ga0068856_100028648
165 Ga0068864_100000021
166 Ga0068863_100000009
167 Ga0068863_100002111
168 Ga0068863_100008391
169 Ga0068858_100346081
170 Ga0068860_100078316
171 Ga0068862_100000017
172 Ga0075368_10000070
173 Ga0075363_100001786
174 Ga0075367_10000247
175 Ga0105251_10000507
176 Ga0105247_10021311
177 Ga0105243_10071568
178 Ga0105248_10000030
179 Ga0105248_10001125
180 Ga0105249_10000137
181 Ga0105246_10085092
182 Ga0163163_10209325
183 Ga0157379_10041703
184 Ga0209257_1009954
185 Ga0207713_1027687
186 Ga0207645_10217783
187 Ga0207705_10000084
188 Ga0207649_10142926
189 Ga0207650_10000095
190 Ga0207644_10137424
191 Ga0207669_10021542
192 Ga0207711_10000029
193 Ga0207711_10007265
194 Ga0207712_10000734
195 Ga0207712_10045557
196 Ga0207658_10000995
197 Ga0207658_10001866
198 Ga0207702_10020749
199 Ga0207641_10000017
200 Ga0207641_10002967
201 Ga0207641_10007009
202 Ga0207676_10000037
203 Ga0209813_10000031
204 Ga0268265_10000025
205 Ga0268264_10279624
206 Ga0307513_10412112
207 Ga0307408_100039159
208 Ga0316575_10001621
209 Ga0307516_10000136
210 Ga0307412_10000122
211 Ga0307412_10005285
212 Ga0307412_10009228
213 Ga0307412_10054387
214 Ga0307414_10585861
215 Ga0316584_0197442
216 Ga0395900_0056884
217 Ga0395898_0262342
218 Ga0400483_257217
219 Ga0451807_0335378
220 Ga0451849_1542000
221 Ga0495639_0029594
222 Ga0495608_0070023
223 Ga0495610_0000136
224 Ga0495637_0092635
225 Ga0495643_0000107
226 Ga0495643_0035930
227 Ga0495642_0082098
228 Ga0495609_0058286
229 Ga0495621_0084381
230 Ga0495597_0019378
231 Ga0495625_0002025
232 Ga0495681_0124119
233 Ga0495686_0000057
234 Ga0495686_0017706
235 Ga0495615_0109934
236 Ga0496103_0025332
237 Ga0496106_0037031
238 Ga0496117_0005000
239 Ga0496117_0013234
240 Ga0496118_0000216
241 Ga0496120_0088643
242 Ga0496121_0010433
243 Ga0496121_0014736
244 Ga0496121_0092350
245 Ga0496121_0191921
246 Ga0496122_0010203
247 Ga0496123_0102218
248 Ga0496124_0133052
249 Ga0496125_0012040
250 Ga0496125_0015789
251 Ga0501223_000054
252 Ga0501246_000569
253 Ga0501257_000083
254 Ga0501225_0000004
255 Ga0501280_000804
256 nmdc:mga0k408_87239_c1
257 nmdc:mga06z11_83_c1
258 nmdc:mga04h51_17_c1
259 nmdc:mga07m45_52074_c1
260 Ga0500635_0000140
261 Ga0500578_0138573
262 Ga0500643_001612
263 Ga0500651_0004358
264 Ga0500641_0009386
265 Ga0500592_016978
266 Ga0500614_003318
267 Ga0500642_0000626
268 Ga0500655_000017
269 Ga0500655_003068
270 Ga0500559_0110018
271 Ga0500573_0000022
272 Ga0500577_0014622
273 Ga0500577_0056971
274 Ga0500590_000414
275 Ga0500616_0078321
276 Ga0500639_009529
277 Ga0500636_0123406
278 Ga0500570_000317
279 Ga0500645_003273
280 Ga0500587_011757
281 2644039284
282 2753764400
283 2809062708
284 2946788586
285 3002142283
286 8002395485

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13410

GST_C_2

Glutathione S-transferase, C-terminal domain

141

220

0.96

PF13409

GST_N_2

Glutathione S-transferase, N-terminal domain

49

114

0.95

PF02798

GST_N

Glutathione S-transferase, N-terminal domain

41

113

0.93

PF13417

GST_N_3

Glutathione S-transferase, N-terminal domain

44

120

0.93

PF00043

GST_C

Glutathione S-transferase, C-terminal domain

146

225

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ikh-assembly1.cif.gz_A-2 crystal structure of a glutathione transferase family member from pseudomonas fluorescens pf-5, target efi-900003, with two glutathione bound 0.8753 3 195
3q19-assembly1.cif.gz_B human glutathione transferase o2 0.8722 1 197
6f05-assembly3.cif.gz_I-3 arabidopsis thaliana gstf9, gso3 bound 0.8703 4 194
6f05-assembly6.cif.gz_H arabidopsis thaliana gstf9, gso3 bound 0.869 4 194
4zb8-assembly1.cif.gz_A crystal structure of the glutathione transferase ure2p6 from phanerochaete chrysosporium in complex with oxidized glutathione. 0.8672 2 194
ID Description Score Start End Superfamily
af_A0A1D6QGT9_2_79_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.917 4 66 3.40.30.10
af_A0A1D6IL16_82_151_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9157 3 58 3.40.30.10
af_P0ACA3_4_88_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9126 3 80 3.40.30.10
3ay8A01 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9101 4 76 3.40.30.10
af_Q9VSL2_5_102_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9081 2 74 3.40.30.10
ID Description Score Start End GO Terms
AF-A0A354U3J2-F1-model_v4 deleted 0.9911 4 84
AF-A0A437M8B3-F1-model_v4 Glutathione S-transferase 0.9873 4 203 GO:0005737
GO:0016740
AF-A0A0Q4HLY7-F1-model_v4 deleted 0.9869 4 210
AF-A0A521NWB3-F1-model_v4 Glutathione S-transferase 0.9867 4 210 GO:0005737
GO:0016740
AF-A0A315CD92-F1-model_v4 Glutathione S-transferase 0.9862 4 203 GO:0005737
GO:0016740

Map