F191673

General Info

Members Datasets Scaffolds Average Seq Length
144 105 134 274

Family's Representative Sequence

Representative Sequence 3300010375|Ga0105239_10028417|Ga0105239_100284175
Length 287
Sequence MFTEPNYRGRMESFFGPAEAAPWIAVPHDDDDKYSRGVVGFVTGSAKYPGAAVLGVEAAARTGVGMIRYLGAGRPTRLVLQRRPEAVTADGRVQAWVLGSGQDPENLDELTTAMLHEALGQNVPMVLDGGALARRSDARGPVLMTPHAGELSKLIDLDVDAIRADPDAAAVRAARELDAVVLLKGHVTRIAVPTAATGGSEPLRVRSAPSWLATAGAGDALAGILGALLATHHEELAADPSLLAPLAATGAVLHGLAAERASAGGPLTILDLAAALPAVVAELLRIP

Samples

Sample ID Description Type Environment
1 2643221566 Microbacterium sp. Root166 Isolate Unclassified
2 2643221597 Microbacterium sp. Root180 Isolate Unclassified
3 2773857759 Microbacterium sp. 1294 Isolate Unclassified
4 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
5 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
6 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
7 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
8 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
9 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
10 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
11 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
12 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
13 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
29 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
34 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
62 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
63 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
64 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
65 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
66 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
67 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
68 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
69 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
70 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
71 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
72 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
73 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
74 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
75 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
76 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
77 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
78 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
79 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
88 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
89 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
90 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
91 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
92 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
93 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
95 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
96 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
97 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
98 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
99 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
100 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
101 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
102 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
103 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
104 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
105 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.36
Metatranscriptomes 0
Isolates 7.64

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.72
Nodule 0
Rhizoplane 0.69
Rhizosphere 69.44
Stem 0
Stem Tuber 0
Unclassified 20.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10092790 3300003316 Bacteria 2888
2 rootH1_10092790 3300003323 Bacteria 2684
3 rootH2_10068620 3300003320 Bacteria 2848
4 Ga0070658_10243148 3300005327 Bacteria 1525
5 Ga0070667_100388714 3300005367 Bacteria 1268
6 Ga0070710_10014918 3300005437 Bacteria 3920
7 Ga0070685_10003408 3300005466 Bacteria 8084
8 Ga0068853_100037458 3300005539 Bacteria 4127
9 Ga0070672_100006320 3300005543 Bacteria 7949
10 Ga0070665_100444929 3300005548 Bacteria 1305
11 Ga0068855_100013180 3300005563 Bacteria 9973
12 Ga0068857_100009785 3300005577 Bacteria 8326
13 Ga0068857_100076649 3300005577 Bacteria 2982
14 Ga0068856_100071412 3300005614 Bacteria 3437
15 Ga0068852_100004785 3300005616 Bacteria 9615
16 Ga0068852_100042418 3300005616 Bacteria 3852
17 Ga0068859_100051517 3300005617 Bacteria 4138
18 Ga0068864_100028554 3300005618 Bacteria 4717
19 Ga0068851_10000005 3300005834 Bacteria 262808
20 Ga0068863_100058986 3300005841 Bacteria 3631
21 Ga0075364_10033282 3300006051 Bacteria 3317
22 Ga0075370_10039838 3300006353 Bacteria 2649
23 Ga0097620_100051517 3300006931 Bacteria 4138
24 Ga0105240_10016260 3300009093 Bacteria 10080
25 Ga0105245_10010641 3300009098 Bacteria 8003
26 Ga0105247_10085872 3300009101 Bacteria 1991
27 Ga0105241_10001398 3300009174 Bacteria 18464
28 Ga0105248_10012546 3300009177 Bacteria 9345
29 Ga0105237_10000464 3300009545 Bacteria 57468
30 Ga0105237_10147936 3300009545 Bacteria 2344
31 Ga0105238_10002588 3300009551 Bacteria 18027
32 Ga0105238_10245537 3300009551 Bacteria 1768
33 Ga0105239_10028417 3300010375 Bacteria 6151
34 Ga0105239_10274349 3300010375 Bacteria 1897
35 Ga0157369_10649334 3300013105 Bacteria 1088
36 Ga0209148_1001503 3300025254 Bacteria 11557
37 Ga0207656_10000001 3300025321 Bacteria 1323684
38 Ga0207656_10000003 3300025321 Bacteria 771644
39 Ga0207656_10000004 3300025321 Bacteria 632320
40 Ga0207692_10007124 3300025898 Bacteria 4570
41 Ga0207705_10030997 3300025909 Bacteria 3816
42 Ga0207654_10000003 3300025911 Bacteria 1030378
43 Ga0207695_10013960 3300025913 Bacteria 9544
44 Ga0207671_10000001 3300025914 Bacteria 1318881
45 Ga0207671_10144877 3300025914 Bacteria 1832
46 Ga0207649_10057318 3300025920 Bacteria 2435
47 Ga0207694_10000066 3300025924 Bacteria 128281
48 Ga0207691_10041649 3300025940 Bacteria 4239
49 Ga0207711_10001250 3300025941 Bacteria 24124
50 Ga0207667_10008787 3300025949 Bacteria 11962
51 Ga0207667_10012633 3300025949 Bacteria 9706
52 Ga0207667_10406444 3300025949 Bacteria 1386
53 Ga0207658_10049153 3300025986 Bacteria 3097
54 Ga0207677_10030752 3300026023 Bacteria 3431
55 Ga0207703_10000026 3300026035 Bacteria 211591
56 Ga0207639_10024676 3300026041 Bacteria 4355
57 Ga0207639_10029138 3300026041 Bacteria 4039
58 Ga0207702_10071973 3300026078 Bacteria 2979
59 Ga0207702_10400993 3300026078 Bacteria 1323
60 Ga0207641_10095805 3300026088 Bacteria 2606
61 Ga0207641_10108984 3300026088 Bacteria 2452
62 Ga0207674_10050457 3300026116 Bacteria 4251
63 Ga0207698_10000779 3300026142 Bacteria 18545
64 Ga0207698_10003025 3300026142 Bacteria 10078
65 Ga0268266_10621697 3300028379 Bacteria 1038
66 Ga0307515_10052508 3300028794 Bacteria 6044
67 Ga0307515_10285829 3300028794 Unclassified 1351
68 Ga0307513_10283616 3300031456 Bacteria 1432
69 Ga0307514_10007613 3300031649 Bacteria 9328
70 Ga0307409_100097755 3300031995 Bacteria 2426
71 Ga0307416_100428082 3300032002 Bacteria 1370
72 Ga0451789_0813768 3300041443 Bacteria 1381
73 Ga0466965_0000012 3300044683 Bacteria 100611
74 Ga0466965_0037729 3300044683 Bacteria 2373
75 Ga0495590_0000355 3300046457 Bacteria 23635
76 Ga0495650_0000757 3300046471 Bacteria 40371
77 Ga0495672_0024623 3300047320 Bacteria 3873
78 Ga0496117_0047985 3300048920 Bacteria 3056
79 Ga0496118_0009142 3300048921 Bacteria 10076
80 Ga0496119_0001580 3300048922 Bacteria 27109
81 Ga0496119_0001687 3300048922 Bacteria 25824
82 Ga0496120_0000617 3300048923 Bacteria 53694
83 Ga0496120_0009620 3300048923 Bacteria 6830
84 Ga0496120_0073045 3300048923 Bacteria 1878
85 Ga0496121_0000289 3300048924 Bacteria 104434
86 Ga0496121_0073300 3300048924 Bacteria 2745
87 Ga0496121_0084059 3300048924 Bacteria 2511
88 Ga0496122_0002343 3300048925 Bacteria 27312
89 Ga0496122_0231882 3300048925 Bacteria 1049
90 Ga0496123_0006710 3300048926 Bacteria 11084
91 Ga0496125_0246962 3300048928 Bacteria 1129
92 Ga0501032_0038537 3300049569 Bacteria 3255
93 Ga0501032_0108891 3300049569 Bacteria 1834
94 Ga0501033_0054948 3300049570 Bacteria 2944
95 Ga0501034_0020022 3300049571 Bacteria 6834
96 Ga0501034_0059239 3300049571 Bacteria 3847
97 Ga0501034_0089915 3300049571 Bacteria 3068
98 Ga0501034_0134581 3300049571 Bacteria 2453
99 Ga0501034_0186830 3300049571 Bacteria 2035
100 Ga0501034_0275251 3300049571 Bacteria 1623
101 Ga0501034_0410946 3300049571 Bacteria 1275
102 Ga0501037_0002383 3300049573 Bacteria 13569
103 Ga0501037_0084784 3300049573 Bacteria 2294
104 Ga0501037_0157004 3300049573 Bacteria 1623
105 Ga0501037_0432202 3300049573 Bacteria 900
106 Ga0501038_0184381 3300049574 Bacteria 1682
107 Ga0501043_0053916 3300049579 Bacteria 3158
108 Ga0501043_0101081 3300049579 Bacteria 2266
109 Ga0501046_0272978 3300049580 Bacteria 1240
110 Ga0501047_0003975 3300049581 Bacteria 13901
111 Ga0501068_0174324 3300049584 Bacteria 1358
112 Ga0501070_0000610 3300049586 Bacteria 32781
113 Ga0501070_0000908 3300049586 Bacteria 26975
114 Ga0501070_0430173 3300049586 Bacteria 1065
115 Ga0501072_0130263 3300049588 Bacteria 2005
116 Ga0501073_0000087 3300049589 Bacteria 58557
117 Ga0501073_0048970 3300049589 Bacteria 2964
118 Ga0501080_0000057 3300049742 Bacteria 72729
119 Ga0501080_0020811 3300049742 Bacteria 6073
120 Ga0501083_0064527 3300049744 Bacteria 2440
121 Ga0501035_0008421 3300049822 Bacteria 9603
122 Ga0501044_0001747 3300049823 Bacteria 25360
123 nmdc:mga00v17_13865_c1 3300050491 Bacteria 4484
124 Ga0500651_0000284 3300053093 Bacteria 29700
125 Ga0500556_0000491 3300053104 Bacteria 27400
126 Ga0500593_000931 3300053117 Bacteria 10833
127 Ga0500559_0000443 3300053136 Bacteria 29438
128 Ga0500559_0000712 3300053136 Bacteria 21851
129 Ga0500568_0000098 3300053139 Bacteria 80393
130 Ga0500568_0000176 3300053139 Bacteria 55879
131 Ga0500573_0025587 3300053140 Bacteria 3394
132 Ga0500616_0000394 3300053153 Bacteria 60261
133 Ga0500620_000045 3300053155 Bacteria 22493
134 Ga0501084_0165290 3300054114 Bacteria 1867

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300032002 Ga0307416_100428082 Ga0307416_1004280821 225
2 3300031995 Ga0307409_100097755 Ga0307409_1000977552 230
3 3300049573 Ga0501037_0432202 Ga0501037_0432202_56_832 234
4 3300048920 Ga0496117_0047985 Ga0496117_0047985_13_720 235
5 iso_pu_bacteria 8045830549 8045832704 238
6 3300049586 Ga0501070_0000610 Ga0501070_0000610_7290_8117 240
7 3300053136 Ga0500559_0000712 Ga0500559_0000712_9620_10426 241
8 3300049586 Ga0501070_0430173 Ga0501070_0430173_174_992 245
9 3300044683 Ga0466965_0037729 Ga0466965_0037729_599_1477 246
10 3300048925 Ga0496122_0231882 Ga0496122_0231882_87_911 250
11 3300049571 Ga0501034_0186830 Ga0501034_0186830_309_1094 259
12 3300049588 Ga0501072_0130263 Ga0501072_0130263_435_1220 259
13 3300049589 Ga0501073_0048970 Ga0501073_0048970_35_820 259
14 3300048922 Ga0496119_0001580 Ga0496119_0001580_5904_6719 261
15 3300048923 Ga0496120_0009620 Ga0496120_0009620_2883_3698 261
16 iso_pu_bacteria 2857733635 2857736772 261
17 3300003320 rootH2_10068620 rootH2_100686202 262
18 3300005437 Ga0070710_10014918 Ga0070710_100149185 262
19 3300025898 Ga0207692_10007124 Ga0207692_100071242 262
20 3300048925 Ga0496122_0002343 Ga0496122_0002343_25330_26145 264
21 3300048926 Ga0496123_0006710 Ga0496123_0006710_8293_9108 264
22 iso_pu_bacteria 2773857759 2774383665 264
23 iso_pu_bacteria 2852643534 2852645009 264
24 iso_pu_bacteria 2977251589 2977251821 264
25 3300006353 Ga0075370_10039838 Ga0075370_100398382 266
26 3300031456 Ga0307513_10283616 Ga0307513_102836162 266
27 3300053139 Ga0500568_0000098 Ga0500568_0000098_10612_11418 266
28 3300005548 Ga0070665_100444929 Ga0070665_1004449292 267
29 3300006051 Ga0075364_10033282 Ga0075364_100332825 267
30 3300028379 Ga0268266_10621697 Ga0268266_106216971 267
31 3300028794 Ga0307515_10052508 Ga0307515_100525084 267
32 3300031649 Ga0307514_10007613 Ga0307514_100076134 267
33 3300049589 Ga0501073_0000087 Ga0501073_0000087_32375_33193 267
34 3300049742 Ga0501080_0020811 Ga0501080_0020811_4094_4912 267
35 3300050491 nmdc:mga00v17_13865_c1 nmdc:mga00v17_13865_c1_54_860 267
36 3300053104 Ga0500556_0000491 Ga0500556_0000491_17238_18044 267
37 3300053117 Ga0500593_000931 Ga0500593_000931_9403_10209 267
38 3300053136 Ga0500559_0000443 Ga0500559_0000443_25760_26569 267
39 iso_pu_bacteria 2643221597 2643996429 267
40 3300005367 Ga0070667_100388714 Ga0070667_1003887141 268
41 3300041443 Ga0451789_0813768 Ga0451789_0813768_281_1093 268
42 3300046457 Ga0495590_0000355 Ga0495590_0000355_3899_4741 268
43 iso_pu_bacteria 2643221566 2643849388 268
44 iso_pu_bacteria 2773857763 2774400233 268
45 iso_pu_bacteria 2862993130 2862995423 269
46 iso_pu_bacteria 2974294766 2974298038 269
47 iso_pu_bacteria 2974324384 2974325724 269
48 3300026035 Ga0207703_10000026 Ga0207703_10000026109 270
49 3300028794 Ga0307515_10285829 Ga0307515_102858291 270
50 3300044683 Ga0466965_0000012 Ga0466965_0000012_39277_40137 270
51 3300049569 Ga0501032_0108891 Ga0501032_0108891_591_1451 270
52 3300049570 Ga0501033_0054948 Ga0501033_0054948_1645_2505 270
53 3300049571 Ga0501034_0089915 Ga0501034_0089915_1494_2306 270
54 3300049571 Ga0501034_0410946 Ga0501034_0410946_16_876 270
55 3300049573 Ga0501037_0084784 Ga0501037_0084784_1231_2043 270
56 3300049573 Ga0501037_0157004 Ga0501037_0157004_158_1018 270
57 3300049574 Ga0501038_0184381 Ga0501038_0184381_722_1582 270
58 3300049579 Ga0501043_0101081 Ga0501043_0101081_1051_1911 270
59 3300049580 Ga0501046_0272978 Ga0501046_0272978_152_964 270
60 3300049584 Ga0501068_0174324 Ga0501068_0174324_64_924 270
61 3300049586 Ga0501070_0000908 Ga0501070_0000908_20661_21473 270
62 3300049742 Ga0501080_0000057 Ga0501080_0000057_12302_13114 270
63 3300049744 Ga0501083_0064527 Ga0501083_0064527_311_1123 270
64 3300053139 Ga0500568_0000176 Ga0500568_0000176_53185_54027 270
65 3300054114 Ga0501084_0165290 Ga0501084_0165290_845_1657 270
66 3300026041 Ga0207639_10024676 Ga0207639_100246762 271
67 3300048924 Ga0496121_0000289 Ga0496121_0000289_14821_15672 271
68 3300048924 Ga0496121_0073300 Ga0496121_0073300_1629_2444 271
69 3300048924 Ga0496121_0084059 Ga0496121_0084059_775_1626 271
70 3300048928 Ga0496125_0246962 Ga0496125_0246962_156_1007 271
71 3300049569 Ga0501032_0038537 Ga0501032_0038537_780_1631 271
72 3300049571 Ga0501034_0020022 Ga0501034_0020022_3869_4684 271
73 3300049571 Ga0501034_0059239 Ga0501034_0059239_1381_2196 271
74 3300049571 Ga0501034_0134581 Ga0501034_0134581_983_1798 271
75 3300049573 Ga0501037_0002383 Ga0501037_0002383_3702_4553 271
76 3300049579 Ga0501043_0053916 Ga0501043_0053916_541_1392 271
77 3300049581 Ga0501047_0003975 Ga0501047_0003975_1988_2839 271
78 3300049822 Ga0501035_0008421 Ga0501035_0008421_3785_4636 271
79 3300049823 Ga0501044_0001747 Ga0501044_0001747_20838_21689 271
80 3300053093 Ga0500651_0000284 Ga0500651_0000284_12590_13426 271
81 3300053140 Ga0500573_0025587 Ga0500573_0025587_999_1862 271
82 3300053155 Ga0500620_000045 Ga0500620_000045_16471_17307 271
83 3300005563 Ga0068855_100013180 Ga0068855_1000131808 272
84 3300009101 Ga0105247_10085872 Ga0105247_100858722 272
85 3300009177 Ga0105248_10012546 Ga0105248_100125465 272
86 3300025941 Ga0207711_10001250 Ga0207711_1000125013 272
87 3300025949 Ga0207667_10012633 Ga0207667_100126333 272
88 3300026088 Ga0207641_10108984 Ga0207641_101089843 272
89 3300046471 Ga0495650_0000757 Ga0495650_0000757_23068_23886 272
90 3300047320 Ga0495672_0024623 Ga0495672_0024623_2200_3030 272
91 3300048923 Ga0496120_0073045 Ga0496120_0073045_936_1754 272
92 3300049571 Ga0501034_0275251 Ga0501034_0275251_568_1410 272
93 3300053153 Ga0500616_0000394 Ga0500616_0000394_26295_27113 272
94 3300005543 Ga0070672_100006320 Ga0070672_1000063204 273
95 3300005618 Ga0068864_100028554 Ga0068864_1000285545 273
96 3300005841 Ga0068863_100058986 Ga0068863_1000589863 273
97 3300025940 Ga0207691_10041649 Ga0207691_100416492 273
98 3300026088 Ga0207641_10095805 Ga0207641_100958052 273
99 3300009551 Ga0105238_10245537 Ga0105238_102455372 275
100 3300013105 Ga0157369_10649334 Ga0157369_106493341 275
101 3300003316 rootH1_10092790 rootH1_100927903 277
102 3300005327 Ga0070658_10243148 Ga0070658_102431481 277
103 3300005466 Ga0070685_10003408 Ga0070685_100034082 277
104 3300005539 Ga0068853_100037458 Ga0068853_1000374583 277
105 3300005577 Ga0068857_100009785 Ga0068857_1000097853 277
106 3300005577 Ga0068857_100076649 Ga0068857_1000766492 277
107 3300005614 Ga0068856_100071412 Ga0068856_1000714122 277
108 3300005616 Ga0068852_100004785 Ga0068852_1000047856 277
109 3300005616 Ga0068852_100042418 Ga0068852_1000424183 277
110 3300005617 Ga0068859_100051517 Ga0068859_1000515174 277
111 3300005834 Ga0068851_10000005 Ga0068851_1000000524 277
112 3300006931 Ga0097620_100051517 Ga0097620_1000515174 277
113 3300009093 Ga0105240_10016260 Ga0105240_100162603 277
114 3300009098 Ga0105245_10010641 Ga0105245_100106412 277
115 3300009174 Ga0105241_10001398 Ga0105241_1000139812 277
116 3300009545 Ga0105237_10000464 Ga0105237_1000046411 277
117 3300009545 Ga0105237_10147936 Ga0105237_101479363 277
118 3300009551 Ga0105238_10002588 Ga0105238_100025883 277
119 3300010375 Ga0105239_10028417 Ga0105239_100284175 277
120 3300010375 Ga0105239_10274349 Ga0105239_102743493 277
121 3300025254 Ga0209148_1001503 Ga0209148_100150310 277
122 3300025321 Ga0207656_10000001 Ga0207656_10000001277 277
123 3300025321 Ga0207656_10000003 Ga0207656_10000003383 277
124 3300025321 Ga0207656_10000004 Ga0207656_10000004240 277
125 3300025909 Ga0207705_10030997 Ga0207705_100309973 277
126 3300025911 Ga0207654_10000003 Ga0207654_10000003596 277
127 3300025913 Ga0207695_10013960 Ga0207695_100139608 277
128 3300025914 Ga0207671_10000001 Ga0207671_10000001275 277
129 3300025914 Ga0207671_10144877 Ga0207671_101448772 277
130 3300025920 Ga0207649_10057318 Ga0207649_100573183 277
131 3300025924 Ga0207694_10000066 Ga0207694_1000006639 277
132 3300025949 Ga0207667_10008787 Ga0207667_100087874 277
133 3300025949 Ga0207667_10406444 Ga0207667_104064441 277
134 3300025986 Ga0207658_10049153 Ga0207658_100491532 277
135 3300026023 Ga0207677_10030752 Ga0207677_100307523 277
136 3300026041 Ga0207639_10029138 Ga0207639_100291383 277
137 3300026078 Ga0207702_10071973 Ga0207702_100719733 277
138 3300026078 Ga0207702_10400993 Ga0207702_104009932 277
139 3300026116 Ga0207674_10050457 Ga0207674_100504573 277
140 3300026142 Ga0207698_10000779 Ga0207698_100007793 277
141 3300026142 Ga0207698_10003025 Ga0207698_100030253 277
142 3300048921 Ga0496118_0009142 Ga0496118_0009142_1620_2453 277
143 3300048922 Ga0496119_0001687 Ga0496119_0001687_2865_3698 277
144 3300048923 Ga0496120_0000617 Ga0496120_0000617_28072_28905 277

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01256

Carb_kinase

Carbohydrate kinase

39

276

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
3rph-assembly1.cif.gz_A crystal structure of adp/atp-dependent nad(p)h-hydrate dehydratase from bacillus subtilis co-crystallized with atp/mg2+. 0.8637 4 273
1kyh-assembly1.cif.gz_A structure of bacillus subtilis yxko, a member of the upf0031 family and a putative kinase 0.8487 4 273
3rq5-assembly1.cif.gz_A crystal structure of adp/atp-dependent nad(p)h-hydrate dehydratase from bacillus subtilis co-crystallized with atp/mg2+ and soaked with coa 0.8475 4 273
2r3b-assembly1.cif.gz_B crystal structure of a ribokinase-like superfamily protein (ef1790) from enterococcus faecalis v583 at 1.80 a resolution 0.8409 4 273
3bgk-assembly1.cif.gz_A the crystal structure of hypothetic protein smu.573 from streptococcus mutans 0.8358 3 275
ID Description Score Start End Superfamily
af_P9WF11_209_473_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8754 5 272 3.40.1190.20
af_P9WF11_209_473_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8691 5 272 3.40.1190.20
af_P32740_1_306_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8583 9 273 3.40.1190.20
af_Q4DA84_248_552_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.843 3 270 3.40.1190.20
af_Q59M69_13_362_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8408 10 268 3.40.1190.20
ID Description Score Start End GO Terms
AF-A0A399NXV3-F1-model_v4 NAD(P)H-hydrate dehydratase 0.9719 12 122 GO:0016836
AF-A0A5E9GV86-F1-model_v4 ADP-dependent (S)-NAD(P)H-hydrate dehydratase (EC 4.2.1.136) (ADP-dependent NAD(P)HX dehydratase) 0.9647 3 275 GO:0005524
GO:0016301
GO:0046496
GO:0052855
GO:0052856
GO:0110051
AF-A0A6J6WK56-F1-model_v4 Unannotated protein 0.9587 4 275 GO:0005524
GO:0052855
GO:0052856
GO:0110051
AF-A0A6J6WUA6-F1-model_v4 Unannotated protein 0.9551 2 275 GO:0005524
GO:0052855
GO:0052856
GO:0110051
AF-A0A2T5X8L9-F1-model_v4 ADP-dependent (S)-NAD(P)H-hydrate dehydratase (EC 4.2.1.136) (ADP-dependent NAD(P)HX dehydratase) 0.9543 4 275 GO:0005524
GO:0046496
GO:0052855
GO:0052856
GO:0110051

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pLDDT pTM Quality
95.35 0.94 High
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Predicted Structure (AlphaFold2)

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