F192572

General Info

Members Datasets Scaffolds Average Seq Length
144 73 289 298

Family's Representative Sequence

Representative Sequence 3300045051|Ga0451576_0002156|Ga0451576_0002156_80_1072
Length 330
Sequence VRLFFFRASLWDLRLFDGVKPAFSLSTCWCSHRHTDGYAMVREMVGLGFNAIELSHGVRITLVPGILKAVEEGIVTISSTHNFCPLPTGIVQAAPNLFEPSTADPREHEQWLRHTKRSIDFAAQVKAKVLVCHLGSVKFFWFNPAGRLQRYARRHAGTVLRDDPQYQAVVEKAFVKLRDRMGPYWERTQQCVREVLAHAKLKGVTLGLENRERFDELPVDADFGDFLASLPGEAPAGYWHDAGHADIKHAMGVIDHRGQLEKLSPRLVGFHLHDVSAEGQDHQPIGTGRVDFEMLSSFWRPEHVLVLELSPRLVPAAVRASRERLEALVA

Samples

Sample ID Description Type Environment
1 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
11 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
14 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
15 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
16 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
17 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
18 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
22 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
25 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
26 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
27 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
28 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
29 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
30 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
31 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
32 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
33 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
34 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
35 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
36 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
37 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
38 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
39 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
40 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
41 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
42 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
43 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
44 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
45 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
46 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
47 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
48 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
49 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
50 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
51 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
52 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
53 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
54 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
55 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
56 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
57 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
58 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
59 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
60 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
61 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
62 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
63 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
67 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
68 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
69 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
70 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
72 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
73 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.31
Metatranscriptomes 0
Isolates 0.69

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.69
Nodule 0
Rhizoplane 0
Rhizosphere 94.44
Stem 0
Stem Tuber 0
Unclassified 6.25

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451576_0002156 3300045051 Bacteria 30456
2 rootH1_10050312 3300003316 Bacteria 1230
3 rootH2_10011330 3300003320 Bacteria 18141
4 rootH2_10058850 3300003320 Bacteria 15647
5 rootL2_10030839 3300003322 Bacteria 7389
6 rootH1_10001404 3300003316 Bacteria 17594
7 rootH1_10001404 3300003323 Bacteria 8713
8 Ga0070683_100039103 3300005329 Bacteria 4353
9 Ga0068869_100000032 3300005334 Bacteria 58379
10 Ga0068868_100020837 3300005338 Bacteria 4934
11 Ga0070713_100011079 3300005436 Bacteria 6548
12 Ga0068867_100008747 3300005459 Bacteria 7147
13 Ga0068857_100296853 3300005577 Unclassified 1489
14 Ga0068856_100008092 3300005614 Bacteria 10265
15 Ga0068856_100167005 3300005614 Bacteria 2212
16 Ga0070717_10000122 3300006028 Bacteria 59651
17 Ga0068871_100013226 3300006358 Bacteria 6121
18 Ga0068865_100002429 3300006881 Bacteria 11011
19 Ga0157374_10565406 3300013296 Bacteria 1145
20 Ga0163163_10095527 3300014325 Bacteria 2992
21 Ga0207700_10003744 3300025928 Bacteria 8880
22 Ga0207689_10000932 3300025942 Bacteria 28064
23 Ga0207661_10043502 3300025944 Bacteria 3544
24 Ga0207677_10013901 3300026023 Bacteria 4679
25 Ga0207677_10080147 3300026023 Bacteria 2338
26 Ga0207702_10001021 3300026078 Bacteria 28735
27 Ga0207648_10001776 3300026089 Bacteria 23622
28 Ga0265337_1000841 3300028556 Bacteria 16114
29 Ga0265337_1004110 3300028556 Bacteria 6113
30 Ga0265337_1012254 3300028556 Bacteria 2922
31 Ga0265337_1015360 3300028556 Bacteria 2507
32 Ga0265337_1032465 3300028556 Bacteria 1544
33 Ga0265319_1000050 3300028563 Bacteria 97690
34 Ga0265319_1001953 3300028563 Bacteria 11673
35 Ga0265319_1003904 3300028563 Bacteria 7593
36 Ga0265319_1006913 3300028563 Bacteria 5175
37 Ga0265319_1012952 3300028563 Bacteria 3344
38 Ga0265319_1019077 3300028563 Unclassified 2569
39 Ga0265319_1022006 3300028563 Bacteria 2331
40 Ga0265334_10001557 3300028573 Bacteria 11043
41 Ga0265334_10039329 3300028573 Unclassified 1857
42 Ga0265318_10000047 3300028577 Bacteria 123944
43 Ga0265318_10002094 3300028577 Bacteria 10917
44 Ga0265318_10002295 3300028577 Bacteria 10274
45 Ga0265318_10006268 3300028577 Bacteria 5495
46 Ga0265318_10006668 3300028577 Bacteria 5295
47 Ga0265318_10013368 3300028577 Bacteria 3471
48 Ga0265318_10030524 3300028577 Bacteria 2096
49 Ga0265323_10004885 3300028653 Bacteria 5732
50 Ga0265323_10006855 3300028653 Bacteria 4765
51 Ga0265322_10009090 3300028654 Bacteria 2888
52 Ga0265336_10010424 3300028666 Bacteria 3182
53 Ga0265336_10012720 3300028666 Bacteria 2824
54 Ga0265338_10000619 3300028800 Bacteria 61997
55 Ga0265338_10001341 3300028800 Bacteria 40147
56 Ga0265324_10010384 3300029957 Unclassified 3592
57 Ga0265324_10015911 3300029957 Bacteria 2759
58 Ga0265324_10018100 3300029957 Bacteria 2554
59 Ga0265328_10035560 3300031239 Bacteria 1842
60 Ga0265320_10000049 3300031240 Bacteria 116386
61 Ga0265320_10002728 3300031240 Bacteria 12212
62 Ga0265320_10004674 3300031240 Bacteria 8938
63 Ga0265320_10005612 3300031240 Bacteria 8019
64 Ga0265320_10007843 3300031240 Bacteria 6592
65 Ga0265320_10008226 3300031240 Bacteria 6402
66 Ga0265320_10011315 3300031240 Bacteria 5256
67 Ga0265320_10020565 3300031240 Bacteria 3573
68 Ga0265320_10024390 3300031240 Unclassified 3199
69 Ga0265320_10026429 3300031240 Bacteria 3038
70 Ga0265320_10034519 3300031240 Bacteria 2572
71 Ga0265320_10046041 3300031240 Bacteria 2140
72 Ga0265325_10002443 3300031241 Bacteria 12553
73 Ga0265325_10009672 3300031241 Bacteria 5621
74 Ga0265340_10005025 3300031247 Bacteria 7357
75 Ga0265339_10034951 3300031249 Bacteria 2822
76 Ga0265331_10012504 3300031250 Bacteria 4594
77 Ga0265331_10028615 3300031250 Bacteria 2786
78 Ga0265327_10000325 3300031251 Bacteria 90949
79 Ga0265327_10001875 3300031251 Bacteria 24315
80 Ga0265327_10102417 3300031251 Bacteria 1379
81 Ga0265316_10041137 3300031344 Bacteria 3701
82 Ga0265316_10069281 3300031344 Bacteria 2722
83 Ga0265316_10180922 3300031344 Bacteria 1570
84 Ga0265316_10229154 3300031344 Bacteria 1368
85 Ga0307408_100000003 3300031548 Bacteria 618438
86 Ga0265313_10001031 3300031595 Bacteria 27090
87 Ga0265313_10011017 3300031595 Bacteria 5652
88 Ga0265313_10019161 3300031595 Bacteria 3820
89 Ga0265313_10024079 3300031595 Unclassified 3260
90 Ga0265313_10024815 3300031595 Bacteria 3191
91 Ga0307508_10000948 3300031616 Bacteria 33780
92 Ga0265314_10001982 3300031711 Bacteria 21748
93 Ga0265314_10005480 3300031711 Bacteria 11442
94 Ga0265314_10014596 3300031711 Bacteria 6271
95 Ga0265314_10015508 3300031711 Bacteria 6046
96 Ga0265342_10004270 3300031712 Bacteria 11317
97 Ga0265342_10036101 3300031712 Bacteria 3021
98 Ga0265342_10084279 3300031712 Unclassified 1831
99 Ga0307410_10000002 3300031852 Bacteria 145309
100 Ga0307407_10011222 3300031903 Bacteria 4254
101 Ga0307409_100000025 3300031995 Bacteria 51516
102 Ga0307416_100000012 3300032002 Bacteria 296814
103 Ga0373960_0032678 3300035121 Bacteria 1463
104 Ga0395905_0000010 3300037471 Bacteria 460729
105 Ga0451577_0000087 3300042876 Bacteria 207662
106 Ga0451577_0108018 3300042876 Bacteria 2488
107 Ga0453684_0020963 3300044712 Bacteria 9803
108 Ga0451576_0000071 3300045051 Bacteria 258795
109 Ga0451576_0003954 3300045051 Bacteria 19756
110 Ga0466967_0033436 3300045976 Bacteria 4353
111 Ga0501031_0058195 3300049568 Bacteria 2518
112 Ga0501032_0000952 3300049569 Bacteria 23372
113 Ga0501032_0048576 3300049569 Bacteria 2865
114 Ga0501033_0000870 3300049570 Bacteria 27610
115 Ga0501034_0210761 3300049571 Bacteria 1898
116 Ga0501036_0088400 3300049572 Bacteria 2618
117 Ga0501037_0024710 3300049573 Bacteria 4443
118 Ga0501037_0026425 3300049573 Bacteria 4291
119 Ga0501038_0085735 3300049574 Bacteria 2647
120 Ga0501038_0387537 3300049574 Bacteria 1083
121 Ga0501042_0245266 3300049578 Bacteria 1292
122 Ga0501043_0034889 3300049579 Unclassified 3957
123 Ga0501043_0238859 3300049579 Bacteria 1402
124 Ga0501046_0001449 3300049580 Bacteria 22829
125 Ga0501046_0019548 3300049580 Bacteria 5616
126 Ga0501046_0049003 3300049580 Bacteria 3343
127 Ga0501046_0268553 3300049580 Unclassified 1251
128 Ga0501047_0020443 3300049581 Bacteria 6357
129 Ga0501047_0049968 3300049581 Bacteria 4038
130 Ga0501047_0226593 3300049581 Bacteria 1724
131 Ga0501068_0033934 3300049584 Bacteria 3042
132 Ga0501070_0324516 3300049586 Bacteria 1252
133 Ga0501073_0081018 3300049589 Bacteria 2258
134 Ga0501073_0397721 3300049589 Bacteria 952
135 Ga0501083_0017143 3300049744 Bacteria 5052
136 Ga0501083_0073809 3300049744 Bacteria 2267
137 Ga0501035_0004303 3300049822 Bacteria 13524
138 Ga0501035_0012453 3300049822 Bacteria 7860
139 Ga0501035_0100526 3300049822 Bacteria 2539
140 Ga0501035_0514038 3300049822 Bacteria 984
141 Ga0501044_0000120 3300049823 Bacteria 94401
142 Ga0501044_0043212 3300049823 Bacteria 4683
143 Ga0501044_0162623 3300049823 Bacteria 2207
144 Ga0500622_0016424 3300053156 Bacteria 3956
145 2788436014 2786546940 Bacteria 6396474
146 Ga0451576_0002156
147 rootH1_10050312
148 rootH2_10011330
149 rootH2_10058850
150 rootL2_10030839
151 rootH1_10001404
152 Ga0070683_100039103
153 Ga0068869_100000032
154 Ga0068868_100020837
155 Ga0070713_100011079
156 Ga0068867_100008747
157 Ga0068857_100296853
158 Ga0068856_100008092
159 Ga0068856_100167005
160 Ga0070717_10000122
161 Ga0068871_100013226
162 Ga0068865_100002429
163 Ga0157374_10565406
164 Ga0163163_10095527
165 Ga0207700_10003744
166 Ga0207689_10000932
167 Ga0207661_10043502
168 Ga0207677_10013901
169 Ga0207677_10080147
170 Ga0207702_10001021
171 Ga0207648_10001776
172 Ga0265337_1000841
173 Ga0265337_1004110
174 Ga0265337_1012254
175 Ga0265337_1015360
176 Ga0265337_1032465
177 Ga0265319_1000050
178 Ga0265319_1001953
179 Ga0265319_1003904
180 Ga0265319_1006913
181 Ga0265319_1012952
182 Ga0265319_1019077
183 Ga0265319_1022006
184 Ga0265334_10001557
185 Ga0265334_10039329
186 Ga0265318_10000047
187 Ga0265318_10002094
188 Ga0265318_10002295
189 Ga0265318_10006268
190 Ga0265318_10006668
191 Ga0265318_10013368
192 Ga0265318_10030524
193 Ga0265323_10004885
194 Ga0265323_10006855
195 Ga0265322_10009090
196 Ga0265336_10010424
197 Ga0265336_10012720
198 Ga0265338_10000619
199 Ga0265338_10001341
200 Ga0265324_10010384
201 Ga0265324_10015911
202 Ga0265324_10018100
203 Ga0265328_10035560
204 Ga0265320_10000049
205 Ga0265320_10002728
206 Ga0265320_10004674
207 Ga0265320_10005612
208 Ga0265320_10007843
209 Ga0265320_10008226
210 Ga0265320_10011315
211 Ga0265320_10020565
212 Ga0265320_10024390
213 Ga0265320_10026429
214 Ga0265320_10034519
215 Ga0265320_10046041
216 Ga0265325_10002443
217 Ga0265325_10009672
218 Ga0265340_10005025
219 Ga0265339_10034951
220 Ga0265331_10012504
221 Ga0265331_10028615
222 Ga0265327_10000325
223 Ga0265327_10001875
224 Ga0265327_10102417
225 Ga0265316_10041137
226 Ga0265316_10069281
227 Ga0265316_10180922
228 Ga0265316_10229154
229 Ga0307408_100000003
230 Ga0265313_10001031
231 Ga0265313_10011017
232 Ga0265313_10019161
233 Ga0265313_10024079
234 Ga0265313_10024815
235 Ga0307508_10000948
236 Ga0265314_10001982
237 Ga0265314_10005480
238 Ga0265314_10014596
239 Ga0265314_10015508
240 Ga0265342_10004270
241 Ga0265342_10036101
242 Ga0265342_10084279
243 Ga0307410_10000002
244 Ga0307407_10011222
245 Ga0307409_100000025
246 Ga0307416_100000012
247 Ga0373960_0032678
248 Ga0395905_0000010
249 Ga0451577_0000087
250 Ga0451577_0108018
251 Ga0453684_0020963
252 Ga0451576_0000071
253 Ga0451576_0003954
254 Ga0466967_0033436
255 Ga0501031_0058195
256 Ga0501032_0000952
257 Ga0501032_0048576
258 Ga0501033_0000870
259 Ga0501034_0210761
260 Ga0501036_0088400
261 Ga0501037_0024710
262 Ga0501037_0026425
263 Ga0501038_0085735
264 Ga0501038_0387537
265 Ga0501042_0245266
266 Ga0501043_0034889
267 Ga0501043_0238859
268 Ga0501046_0001449
269 Ga0501046_0019548
270 Ga0501046_0049003
271 Ga0501046_0268553
272 Ga0501047_0020443
273 Ga0501047_0049968
274 Ga0501047_0226593
275 Ga0501068_0033934
276 Ga0501070_0324516
277 Ga0501073_0081018
278 Ga0501073_0397721
279 Ga0501083_0017143
280 Ga0501083_0073809
281 Ga0501035_0004303
282 Ga0501035_0012453
283 Ga0501035_0100526
284 Ga0501035_0514038
285 Ga0501044_0000120
286 Ga0501044_0043212
287 Ga0501044_0162623
288 Ga0500622_0016424
289 2788436014

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01261

AP_endonuc_2

Xylose isomerase-like TIM barrel

41

327

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
3wqo-assembly1.cif.gz_B crystal structure of d-tagatose 3-epimerase-like protein 0.7869 6 289
3cqi-assembly1.cif.gz_B crystal structure of l-xylulose-5-phosphate 3-epimerase ulae (form b) complex with sulfate 0.7609 3 289
6wn6-assembly1.cif.gz_A crystal structure of 3-keto-d-glucoside 4-epimerase, ycjr, from e. coli, apo form 0.7586 3 284
5zfs-assembly1.cif.gz_B crystal structure of arthrobacter globiformis m30 sugar epimerase which can produce d-allulose from d-fructose 0.7561 3 289
3cqj-assembly1.cif.gz_B crystal structure of l-xylulose-5-phosphate 3-epimerase ulae (form b) complex with zn2+ 0.7549 3 289
ID Description Score Start End Superfamily
af_Q59009_1_251_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.8241 7 286 3.20.20.150
3wqoA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.7883 6 289 3.20.20.150
af_P76044_1_262_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.7844 3 284 3.20.20.150
af_Q58587_1_265_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.7809 3 284 3.20.20.150
5vyeD02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.7742 146 167 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A2A2RVV4-F1-model_v4 Xylose isomerase 0.9979 1 291 GO:0016853
AF-A0A2A2RVV4-F1-model_v4 Xylose isomerase 0.9944 1 291 GO:0016853
AF-B1ZMU9-F1-model_v4 Xylose isomerase domain protein TIM barrel 0.9902 1 286 GO:0016853
AF-A0A6N6ZAA2-F1-model_v4 Xylose isomerase domain-containing protein 0.9833 1 289 GO:0016853
AF-A0A848ABI0-F1-model_v4 deleted 0.977 149 285

Map