F195073

General Info

Members Datasets Scaffolds Average Seq Length
145 85 145 515

Family's Representative Sequence

Representative Sequence 3300031247|Ga0265340_10009070|Ga0265340_100090703
Length 591
Sequence MSILTYIAGWPLVAALVLVLVPRNYRVIIRAVALLGTFISMALAIKMFCQFVPGANGYQFEQQIPWVESLGISYHVGVDGLNVGLILMGAIVAFAATCCSWEIKEREKEFYILLLVMSGGILGAFASLDLFFFYFLHELALVPTFIMIGVWGRGERKNYATFQITLYLSIGALIALIGLIALYLQSGANTFDIPKLIEHAKTNPLAVNAQNFIFPLLLFGFGILVSLWPFHSWAPLGYSSAPSPTAMLHAGVLKKFGLYGLIRVALPLMPQAMHTTVLCPVWFAHFPLNLLPAATQHWLLSLGWLHILALLCLGNILYVGWVAMRQKDLNLLIGNSSVAHMGFIFLGIASLNLIGVTGAVLIMIAHGFLAALTFALSGYIYQQTGTLEMSRLGGLCRQLPFIGTALLMAALAGCGLPGFANFVGEVTVFFGAWTVFPLVTALAVWGALLIGALYMLRAMREVLHGPLPEKWMTLPDASNAWRKLPYALLLASLFVFGVWPRLLTEKITPDAEKIVAMAQSETVAVGSTRVSRVQFGVPPNWVGTQVTEIEHTRSSDLRPQAVSGVTPETTRETRVLHNMSVRALADNTILN

Samples

Sample ID Description Type Environment
1 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
2 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
3 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
4 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
5 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
6 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
7 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
8 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
9 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
10 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
11 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
12 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
13 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
14 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
15 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
16 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
17 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
28 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
29 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
30 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
31 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
32 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
33 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
34 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
35 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
36 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
37 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
38 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
39 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
40 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
41 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
42 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
43 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
44 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
45 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
46 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
47 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
48 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
49 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
50 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
51 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
52 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
53 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
54 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
55 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
56 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
57 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
58 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
59 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
60 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
61 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
62 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
63 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
64 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
65 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
66 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
67 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
68 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
69 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
70 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
71 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
72 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
73 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
74 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
75 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
76 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
77 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
78 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
83 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
85 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.69
Rhizosphere 98.62
Stem 0
Stem Tuber 0
Unclassified 0.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10147189 3300003323 Bacteria 3521
2 Ga0070714_100003210 3300005435 Bacteria 12171
3 Ga0070713_100131055 3300005436 Unclassified 2211
4 Ga0068855_100048281 3300005563 Bacteria 5025
5 Ga0068855_100069099 3300005563 Bacteria 4111
6 Ga0068855_100158051 3300005563 Unclassified 2574
7 Ga0068855_100197979 3300005563 Unclassified 2263
8 Ga0068857_100005924 3300005577 Bacteria 10436
9 Ga0068856_100001472 3300005614 Bacteria 24668
10 Ga0068856_100027108 3300005614 Bacteria 5589
11 Ga0068859_100004968 3300005617 Bacteria 13511
12 Ga0068864_100026221 3300005618 Bacteria 4914
13 Ga0075428_100003239 3300006844 Bacteria 17824
14 Ga0097620_100004968 3300006931 Bacteria 13511
15 Ga0105240_10002292 3300009093 Bacteria 30998
16 Ga0105240_10154444 3300009093 Bacteria 2731
17 Ga0111539_10069487 3300009094 Unclassified 4159
18 Ga0105238_10067389 3300009551 Bacteria 3581
19 Ga0105238_10155882 3300009551 Bacteria 2259
20 Ga0157375_10000086 3300013308 Bacteria 93377
21 Ga0163163_10018644 3300014325 Bacteria 6501
22 Ga0157376_10173890 3300014969 Bacteria 1963
23 Ga0207695_10028567 3300025913 Bacteria 6180
24 Ga0207695_10047335 3300025913 Bacteria 4552
25 Ga0207663_10137784 3300025916 Unclassified 1696
26 Ga0207694_10054124 3300025924 Bacteria 3113
27 Ga0207694_10102236 3300025924 Bacteria 2272
28 Ga0207664_10005622 3300025929 Bacteria 8578
29 Ga0207670_10042673 3300025936 Bacteria 2990
30 Ga0207667_10044721 3300025949 Bacteria 4691
31 Ga0207667_10056271 3300025949 Bacteria 4132
32 Ga0207667_10119521 3300025949 Bacteria 2716
33 Ga0207703_10034043 3300026035 Bacteria 4041
34 Ga0207702_10002049 3300026078 Bacteria 19503
35 Ga0207702_10011792 3300026078 Bacteria 7279
36 Ga0207676_10070888 3300026095 Bacteria 2796
37 Ga0207674_10020087 3300026116 Bacteria 7225
38 Ga0265337_1000140 3300028556 Bacteria 36107
39 Ga0265337_1000920 3300028556 Bacteria 15425
40 Ga0265337_1004388 3300028556 Bacteria 5855
41 Ga0265337_1004569 3300028556 Bacteria 5709
42 Ga0265337_1029668 3300028556 Bacteria 1634
43 Ga0265326_10006423 3300028558 Bacteria 3654
44 Ga0265319_1000007 3300028563 Bacteria 217194
45 Ga0265334_10004229 3300028573 Bacteria 6404
46 Ga0265323_10000237 3300028653 Bacteria 32647
47 Ga0265338_10000075 3300028800 Bacteria 180334
48 Ga0265338_10000425 3300028800 Bacteria 75565
49 Ga0265338_10000431 3300028800 Bacteria 75210
50 Ga0265338_10000433 3300028800 Bacteria 75181
51 Ga0265338_10000945 3300028800 Bacteria 48867
52 Ga0265338_10001555 3300028800 Bacteria 37061
53 Ga0265338_10002354 3300028800 Bacteria 28532
54 Ga0265338_10003683 3300028800 Bacteria 21352
55 Ga0265338_10010919 3300028800 Bacteria 10561
56 Ga0265338_10019255 3300028800 Bacteria 7259
57 Ga0265338_10020543 3300028800 Bacteria 6943
58 Ga0265338_10027437 3300028800 Bacteria 5713
59 Ga0265338_10032402 3300028800 Bacteria 5098
60 Ga0265338_10039859 3300028800 Bacteria 4421
61 Ga0265338_10165977 3300028800 Unclassified 1699
62 Ga0265324_10002329 3300029957 Bacteria 9831
63 Ga0265324_10011417 3300029957 Unclassified 3383
64 Ga0265324_10013729 3300029957 Bacteria 3014
65 Ga0265324_10023431 3300029957 Unclassified 2199
66 Ga0265332_10006568 3300031238 Bacteria 5274
67 Ga0265332_10015329 3300031238 Bacteria 3382
68 Ga0265320_10000188 3300031240 Bacteria 51229
69 Ga0265320_10003925 3300031240 Bacteria 9826
70 Ga0265320_10011472 3300031240 Bacteria 5213
71 Ga0265329_10001249 3300031242 Bacteria 12429
72 Ga0265340_10009070 3300031247 Bacteria 5350
73 Ga0265339_10017090 3300031249 Bacteria 4302
74 Ga0265339_10032858 3300031249 Bacteria 2925
75 Ga0265327_10000752 3300031251 Bacteria 50420
76 Ga0265327_10004013 3300031251 Bacteria 13398
77 Ga0265327_10008595 3300031251 Bacteria 7572
78 Ga0265327_10012406 3300031251 Bacteria 5755
79 Ga0265316_10009696 3300031344 Bacteria 8839
80 Ga0265316_10010502 3300031344 Bacteria 8432
81 Ga0265316_10071264 3300031344 Bacteria 2679
82 Ga0265313_10001008 3300031595 Bacteria 27543
83 Ga0265313_10012570 3300031595 Bacteria 5154
84 Ga0265314_10000148 3300031711 Bacteria 105207
85 Ga0265314_10047305 3300031711 Unclassified 3028
86 Ga0265342_10021214 3300031712 Bacteria 4153
87 Ga0265342_10042656 3300031712 Bacteria 2740
88 Ga0373930_0000722 3300034816 Bacteria 4665
89 Ga0373938_0006249 3300034957 Bacteria 2052
90 Ga0373928_0000357 3300035084 Bacteria 9137
91 Ga0373951_0001097 3300035091 Bacteria 7224
92 Ga0373932_0000001 3300035112 Bacteria 1459067
93 Ga0373962_0000018 3300035242 Bacteria 47177
94 Ga0373931_0000002 3300035691 Bacteria 599830
95 Ga0373935_0003342 3300035692 Bacteria 9294
96 Ga0373935_0040852 3300035692 Bacteria 2912
97 Ga0373947_0019644 3300035725 Bacteria 3897
98 Ga0373937_0001956 3300036401 Bacteria 17266
99 Ga0373925_0000272 3300037068 Bacteria 54186
100 Ga0373925_0000552 3300037068 Bacteria 36801
101 Ga0451577_0018685 3300042876 Bacteria 6380
102 Ga0451577_0033112 3300042876 Bacteria 4658
103 Ga0453684_0002848 3300044712 Bacteria 40690
104 Ga0453684_0047909 3300044712 Bacteria 5660
105 Ga0451576_0012615 3300045051 Bacteria 9486
106 Ga0451576_0103981 3300045051 Bacteria 2954
107 Ga0495592_0000023 3300046454 Bacteria 137490
108 Ga0495664_0016615 3300046477 Unclassified 4195
109 Ga0495618_0007045 3300046514 Bacteria 6811
110 Ga0495628_0001471 3300046516 Bacteria 21620
111 Ga0495630_0000191 3300046517 Bacteria 47951
112 Ga0495630_0017873 3300046517 Bacteria 5201
113 Ga0495666_0031219 3300046526 Bacteria 2610
114 Ga0495666_0060195 3300046526 Bacteria 1815
115 Ga0495640_0008473 3300046533 Bacteria 8062
116 Ga0495586_0000113 3300046535 Bacteria 48115
117 Ga0495586_0000762 3300046535 Bacteria 18510
118 Ga0495586_0002377 3300046535 Bacteria 10217
119 Ga0495586_0018881 3300046535 Bacteria 3669
120 Ga0495622_0024853 3300046557 Bacteria 2797
121 Ga0495667_0000367 3300046559 Bacteria 28503
122 Ga0495667_0026084 3300046559 Bacteria 3936
123 Ga0495667_0028414 3300046559 Bacteria 3766
124 Ga0495634_0003404 3300046642 Bacteria 12775
125 Ga0495635_0041899 3300046663 Bacteria 3163
126 Ga0495657_0074089 3300046675 Bacteria 2216
127 Ga0495658_0105973 3300046683 Bacteria 1684
128 Ga0495613_0052609 3300046689 Bacteria 2998
129 Ga0495624_0053770 3300046690 Unclassified 2541
130 Ga0495674_0000804 3300047319 Bacteria 29853
131 Ga0495674_0014870 3300047319 Bacteria 7280
132 Ga0495676_0052136 3300047321 Bacteria 3268
133 Ga0495680_0036806 3300047322 Bacteria 3925
134 Ga0496107_0058176 3300048910 Bacteria 2795
135 Ga0501031_0002393 3300049568 Bacteria 11921
136 Ga0501031_0015398 3300049568 Bacteria 4966
137 Ga0501032_0019114 3300049569 Bacteria 4793
138 Ga0501033_0003744 3300049570 Bacteria 12364
139 Ga0501033_0056148 3300049570 Bacteria 2911
140 Ga0501039_0114322 3300049575 Bacteria 2112
141 Ga0501080_0023318 3300049742 Bacteria 5738
142 Ga0501035_0005254 3300049822 Bacteria 12253
143 Ga0501035_0068015 3300049822 Bacteria 3159
144 Ga0501044_0000125 3300049823 Bacteria 92969
145 nmdc:mga08y16_24904_c1 3300050511 Bacteria 6312

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025949 Ga0207667_10044721 Ga0207667_100447212 442
2 3300013308 Ga0157375_10000086 Ga0157375_1000008672 472
3 3300046533 Ga0495640_0008473 Ga0495640_0008473_3303_4757 473
4 3300031251 Ga0265327_10000752 Ga0265327_1000075225 476
5 3300042876 Ga0451577_0033112 Ga0451577_0033112_1504_3042 476
6 3300048910 Ga0496107_0058176 Ga0496107_0058176_983_2425 478
7 3300046683 Ga0495658_0105973 Ga0495658_0105973_25_1509 482
8 3300009093 Ga0105240_10154444 Ga0105240_101544442 483
9 3300025913 Ga0207695_10028567 Ga0207695_100285676 483
10 3300046559 Ga0495667_0000367 Ga0495667_0000367_21316_22836 485
11 3300031344 Ga0265316_10009696 Ga0265316_100096967 488
12 3300031711 Ga0265314_10047305 Ga0265314_100473052 488
13 3300009094 Ga0111539_10069487 Ga0111539_100694874 489
14 3300028556 Ga0265337_1004388 Ga0265337_10043882 490
15 3300006844 Ga0075428_100003239 Ga0075428_1000032398 494
16 3300050511 nmdc:mga08y16_24904_c1 nmdc:mga08y16_24904_c1_3082_4581 494
17 3300025924 Ga0207694_10054124 Ga0207694_100541242 495
18 3300005563 Ga0068855_100158051 Ga0068855_1001580512 497
19 3300031251 Ga0265327_10004013 Ga0265327_100040133 497
20 3300028800 Ga0265338_10027437 Ga0265338_100274372 498
21 3300049570 Ga0501033_0056148 Ga0501033_0056148_95_1606 498
22 3300046454 Ga0495592_0000023 Ga0495592_0000023_66712_68250 501
23 3300046477 Ga0495664_0016615 Ga0495664_0016615_799_2337 501
24 3300046516 Ga0495628_0001471 Ga0495628_0001471_6580_8118 501
25 3300046535 Ga0495586_0002377 Ga0495586_0002377_7209_8747 501
26 3300046690 Ga0495624_0053770 Ga0495624_0053770_16_1554 501
27 3300047319 Ga0495674_0014870 Ga0495674_0014870_4382_5920 501
28 3300005435 Ga0070714_100003210 Ga0070714_1000032102 502
29 3300009093 Ga0105240_10002292 Ga0105240_1000229220 502
30 3300025913 Ga0207695_10047335 Ga0207695_100473352 502
31 3300025929 Ga0207664_10005622 Ga0207664_100056228 502
32 3300046526 Ga0495666_0060195 Ga0495666_0060195_259_1803 502
33 3300046535 Ga0495586_0018881 Ga0495586_0018881_1104_2648 502
34 3300046689 Ga0495613_0052609 Ga0495613_0052609_769_2313 502
35 3300047321 Ga0495676_0052136 Ga0495676_0052136_105_1649 502
36 3300025916 Ga0207663_10137784 Ga0207663_101377841 504
37 3300035692 Ga0373935_0003342 Ga0373935_0003342_3141_4670 504
38 3300035725 Ga0373947_0019644 Ga0373947_0019644_1873_3402 504
39 3300037068 Ga0373925_0000272 Ga0373925_0000272_9563_11092 504
40 3300028800 Ga0265338_10000075 Ga0265338_1000007549 505
41 3300028800 Ga0265338_10000425 Ga0265338_1000042546 505
42 3300031249 Ga0265339_10032858 Ga0265339_100328582 505
43 3300031251 Ga0265327_10012406 Ga0265327_100124062 505
44 3300049575 Ga0501039_0114322 Ga0501039_0114322_524_2086 505
45 3300028563 Ga0265319_1000007 Ga0265319_1000007105 506
46 3300028800 Ga0265338_10019255 Ga0265338_100192556 506
47 3300031240 Ga0265320_10011472 Ga0265320_100114722 506
48 3300031595 Ga0265313_10001008 Ga0265313_1000100814 506
49 3300042876 Ga0451577_0018685 Ga0451577_0018685_927_2459 506
50 3300009551 Ga0105238_10067389 Ga0105238_100673892 507
51 3300028800 Ga0265338_10039859 Ga0265338_100398593 507
52 3300029957 Ga0265324_10011417 Ga0265324_100114172 507
53 3300029957 Ga0265324_10013729 Ga0265324_100137292 507
54 3300031251 Ga0265327_10008595 Ga0265327_100085952 507
55 3300034816 Ga0373930_0000722 Ga0373930_0000722_968_2500 507
56 3300034957 Ga0373938_0006249 Ga0373938_0006249_249_1775 507
57 3300035084 Ga0373928_0000357 Ga0373928_0000357_6621_8153 507
58 3300035091 Ga0373951_0001097 Ga0373951_0001097_626_2158 507
59 3300035112 Ga0373932_0000001 Ga0373932_0000001_1144715_1146247 507
60 3300035242 Ga0373962_0000018 Ga0373962_0000018_38521_40053 507
61 3300035691 Ga0373931_0000002 Ga0373931_0000002_349151_350683 507
62 3300035692 Ga0373935_0040852 Ga0373935_0040852_18_1550 507
63 3300037068 Ga0373925_0000552 Ga0373925_0000552_11193_12725 507
64 3300049568 Ga0501031_0015398 Ga0501031_0015398_2640_4172 507
65 3300049742 Ga0501080_0023318 Ga0501080_0023318_3394_4929 507
66 3300049822 Ga0501035_0068015 Ga0501035_0068015_1322_2857 507
67 3300005577 Ga0068857_100005924 Ga0068857_1000059246 508
68 3300026116 Ga0207674_10020087 Ga0207674_100200872 508
69 3300031238 Ga0265332_10006568 Ga0265332_100065682 508
70 3300031242 Ga0265329_10001249 Ga0265329_100012498 508
71 3300031711 Ga0265314_10000148 Ga0265314_1000014860 508
72 3300045051 Ga0451576_0012615 Ga0451576_0012615_6554_8101 508
73 3300049568 Ga0501031_0002393 Ga0501031_0002393_3348_4919 508
74 3300049569 Ga0501032_0019114 Ga0501032_0019114_2859_4430 508
75 3300049570 Ga0501033_0003744 Ga0501033_0003744_3137_4708 508
76 3300049822 Ga0501035_0005254 Ga0501035_0005254_1782_3353 508
77 3300049823 Ga0501044_0000125 Ga0501044_0000125_68367_69938 508
78 3300005563 Ga0068855_100197979 Ga0068855_1001979792 509
79 3300026035 Ga0207703_10034043 Ga0207703_100340432 509
80 3300028556 Ga0265337_1029668 Ga0265337_10296681 509
81 3300028573 Ga0265334_10004229 Ga0265334_100042292 509
82 3300028800 Ga0265338_10000431 Ga0265338_1000043121 509
83 3300028800 Ga0265338_10020543 Ga0265338_100205436 509
84 3300028800 Ga0265338_10032402 Ga0265338_100324023 509
85 3300031238 Ga0265332_10015329 Ga0265332_100153292 509
86 3300031240 Ga0265320_10003925 Ga0265320_100039258 509
87 3300031712 Ga0265342_10021214 Ga0265342_100212142 509
88 3300005563 Ga0068855_100069099 Ga0068855_1000690992 510
89 3300005617 Ga0068859_100004968 Ga0068859_1000049688 510
90 3300006931 Ga0097620_100004968 Ga0097620_1000049688 510
91 3300025949 Ga0207667_10056271 Ga0207667_100562712 510
92 3300028800 Ga0265338_10002354 Ga0265338_1000235419 510
93 3300005614 Ga0068856_100027108 Ga0068856_1000271085 511
94 3300009551 Ga0105238_10155882 Ga0105238_101558822 511
95 3300025924 Ga0207694_10102236 Ga0207694_101022362 511
96 3300026078 Ga0207702_10011792 Ga0207702_100117925 511
97 3300028558 Ga0265326_10006423 Ga0265326_100064233 511
98 3300044712 Ga0453684_0002848 Ga0453684_0002848_22864_24429 511
99 3300046517 Ga0495630_0000191 Ga0495630_0000191_31993_33567 511
100 3300046526 Ga0495666_0031219 Ga0495666_0031219_24_1598 511
101 3300046535 Ga0495586_0000113 Ga0495586_0000113_14884_16458 511
102 3300046557 Ga0495622_0024853 Ga0495622_0024853_522_2150 511
103 3300046642 Ga0495634_0003404 Ga0495634_0003404_2598_4172 511
104 3300047319 Ga0495674_0000804 Ga0495674_0000804_25614_27188 511
105 3300005563 Ga0068855_100048281 Ga0068855_1000482812 512
106 3300005614 Ga0068856_100001472 Ga0068856_1000014729 512
107 3300025949 Ga0207667_10119521 Ga0207667_101195212 512
108 3300026078 Ga0207702_10002049 Ga0207702_100020499 512
109 3300028556 Ga0265337_1000920 Ga0265337_10009207 512
110 3300028556 Ga0265337_1004569 Ga0265337_10045694 512
111 3300028800 Ga0265338_10000433 Ga0265338_100004334 512
112 3300028800 Ga0265338_10000945 Ga0265338_1000094526 512
113 3300028800 Ga0265338_10010919 Ga0265338_1001091910 512
114 3300028800 Ga0265338_10165977 Ga0265338_101659771 512
115 3300029957 Ga0265324_10002329 Ga0265324_100023297 512
116 3300031240 Ga0265320_10000188 Ga0265320_1000018821 512
117 3300031249 Ga0265339_10017090 Ga0265339_100170902 512
118 3300031344 Ga0265316_10010502 Ga0265316_100105023 512
119 3300031344 Ga0265316_10071264 Ga0265316_100712642 512
120 3300031595 Ga0265313_10012570 Ga0265313_100125705 512
121 3300031712 Ga0265342_10042656 Ga0265342_100426562 512
122 3300036401 Ga0373937_0001956 Ga0373937_0001956_10328_11890 512
123 3300044712 Ga0453684_0047909 Ga0453684_0047909_3676_5280 512
124 3300046514 Ga0495618_0007045 Ga0495618_0007045_4677_6239 512
125 3300046517 Ga0495630_0017873 Ga0495630_0017873_2047_3600 512
126 3300046535 Ga0495586_0000762 Ga0495586_0000762_7879_9441 512
127 3300046559 Ga0495667_0026084 Ga0495667_0026084_1747_3309 512
128 3300046559 Ga0495667_0028414 Ga0495667_0028414_899_2452 512
129 3300046663 Ga0495635_0041899 Ga0495635_0041899_1554_3116 512
130 3300046675 Ga0495657_0074089 Ga0495657_0074089_28_1581 512
131 3300047322 Ga0495680_0036806 Ga0495680_0036806_1993_3546 512
132 3300005618 Ga0068864_100026221 Ga0068864_1000262212 513
133 3300014325 Ga0163163_10018644 Ga0163163_100186444 513
134 3300026095 Ga0207676_10070888 Ga0207676_100708882 513
135 3300045051 Ga0451576_0103981 Ga0451576_0103981_86_1675 513
136 3300005436 Ga0070713_100131055 Ga0070713_1001310552 514
137 3300014969 Ga0157376_10173890 Ga0157376_101738902 514
138 3300025936 Ga0207670_10042673 Ga0207670_100426733 514
139 3300028556 Ga0265337_1000140 Ga0265337_100014012 514
140 3300028653 Ga0265323_10000237 Ga0265323_1000023718 514
141 3300028800 Ga0265338_10001555 Ga0265338_1000155526 514
142 3300031247 Ga0265340_10009070 Ga0265340_100090703 514
143 3300029957 Ga0265324_10023431 Ga0265324_100234312 515
144 3300028800 Ga0265338_10003683 Ga0265338_1000368311 517
145 3300003323 rootH1_10147189 rootH1_101471893 520

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00361

Proton_antipo_M

Proton-conducting membrane transporter

289

451

0.93

PF00361

Proton_antipo_M

Proton-conducting membrane transporter

127

285

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
8beh-assembly1.cif.gz_M cryo-em structure of the arabidopsis thaliana i+iii2 supercomplex (ci membrane tip) 0.9636 275 491
7ar7-assembly1.cif.gz_M cryo-em structure of arabidopsis thaliana complex-i (open conformation) 0.954 6 491
8e73-assembly1.cif.gz_4M vigna radiata supercomplex i+iii2 (full bridge) 0.9531 6 493
6tjv-assembly1.cif.gz_D structure of the ndh-1ms complex from thermosynechococcus elongatus 0.9513 6 492
8e9g-assembly1.cif.gz_M mycobacterial respiratory complex i with both quinone positions modelled 0.9504 2 494
ID Description Score Start End Superfamily
af_M1FQK6_1_136_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.9025 7 132 1.20.1070.10
af_P26288_1_130_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.8981 2 131 1.20.1070.10
af_P26288_1_130_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.8785 2 131 1.20.1070.10
af_P0AFE8_1_132_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.8728 6 130 1.20.1070.10
af_P0AFE8_1_132_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.8234 6 130 1.20.1070.10
ID Description Score Start End GO Terms
AF-A0A7V9NRB8-F1-model_v4 NADH-quinone oxidoreductase subunit M 0.9785 246 494 GO:0003954
GO:0008137
GO:0012505
GO:0015990
GO:0016020
GO:0042773
GO:0048039
AF-A0A7Y5JQC0-F1-model_v4 NADH-quinone oxidoreductase subunit M 0.9754 1 490 GO:0003954
GO:0008137
GO:0012505
GO:0015990
GO:0016020
GO:0042773
GO:0048039
AF-A0A520ZVG9-F1-model_v4 NADH-quinone oxidoreductase subunit M 0.9752 227 494 GO:0003954
GO:0008137
GO:0012505
GO:0015990
GO:0016020
GO:0042773
GO:0048039
AF-A0A7Y2PBL1-F1-model_v4 NADH-quinone oxidoreductase subunit M 0.9732 282 492 GO:0003954
GO:0008137
GO:0012505
GO:0015990
GO:0016020
GO:0042773
GO:0048039
AF-A0A536AAM8-F1-model_v4 NADH-quinone oxidoreductase subunit M (EC 1.6.5.-) 0.9726 256 497 GO:0003954
GO:0008137
GO:0012505
GO:0015990
GO:0016020
GO:0042773
GO:0048039

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pLDDT pTM Quality
88.61 0.9 High
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Predicted Structure (AlphaFold2)

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