F198552

General Info

Members Datasets Scaffolds Average Seq Length
146 91 146 390

Family's Representative Sequence

Representative Sequence 3300047322|Ga0495680_0090909|Ga0495680_0090909_622_1959
Length 445
Sequence LFVIFKYLNRSGKSLLSVNCGFLSADCAGHFLPLLEQDMQIRHAGQTRVIYVCSRLIYDRPTMPRTIYLDYNATTPLDPAVRDAMMPFLGEVWGNPSSVHHVGRKARAMLDDARDRAAKFLGAKPSEIIFTSGGTESNNLAIFGTARILKSKGKHLITSVVEHHAVLDCFGYLEKREGFEVTRLPVDSEGRVSPDDLKRAIRPDTILVSILAANNEIGTLQPVSDLGAICRARGVLFHTDAVQWLGKAPFENLAQFNADLVSVCCAHKFHGPKGVSLLWIKSPLHPDPIIFGGGHENERRAGTENVAGIIGLVAAMERFVKPSVFDESRLKPLADKLRSAIQKIDGSEMVSPREDCLPNTVSFVVRGSDSIALLAGLDVEGICASSGSACSAGSLEPSHVIVATGRKDMAHSLVRLSLGRETTAAEIDYVCVVLPDIIRRAQRAK

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
4 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
5 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
6 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
7 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
8 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
9 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
10 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
11 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
12 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
13 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
14 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
15 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
16 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
17 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
18 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
19 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
20 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
21 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
22 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
34 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
35 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
36 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
37 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
38 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
39 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
40 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
41 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
42 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
43 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
44 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
45 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
46 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
47 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
48 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
49 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
50 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
51 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
52 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
53 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
54 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
55 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
56 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
57 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
58 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
59 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
60 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
61 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
62 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
63 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
64 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
65 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
66 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
67 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
68 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
69 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
70 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
71 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
72 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
73 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
74 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
75 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
76 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
77 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
78 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
84 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
85 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
86 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
88 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
89 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
90 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
91 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.68
Nodule 0
Rhizoplane 0
Rhizosphere 98.63
Stem 0
Stem Tuber 0
Unclassified 0.68

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10038281 3300003320 Unclassified 3847
2 Ga0070690_100089940 3300005330 Bacteria 2020
3 Ga0070673_100186855 3300005364 Bacteria 1777
4 Ga0070707_100161536 3300005468 Bacteria 2183
5 Ga0070679_100304268 3300005530 Bacteria 1545
6 Ga0070697_100033739 3300005536 Bacteria 4124
7 Ga0070686_100052488 3300005544 Bacteria 2600
8 Ga0070695_100254256 3300005545 Bacteria 1280
9 Ga0068855_100152544 3300005563 Unclassified 2627
10 Ga0068855_100203601 3300005563 Bacteria 2227
11 Ga0068855_100247194 3300005563 Bacteria 1991
12 Ga0068857_100007626 3300005577 Bacteria 9321
13 Ga0068856_100000017 3300005614 Bacteria 154589
14 Ga0068856_100231786 3300005614 Bacteria 1862
15 Ga0068859_100034893 3300005617 Bacteria 5047
16 Ga0068858_100151045 3300005842 Bacteria 2184
17 Ga0075428_100003743 3300006844 Bacteria 16685
18 Ga0097620_100034893 3300006931 Bacteria 5047
19 Ga0105240_10089388 3300009093 Unclassified 3767
20 Ga0111539_10015345 3300009094 Bacteria 9538
21 Ga0111539_10074815 3300009094 Bacteria 3991
22 Ga0105242_10133192 3300009176 Bacteria 2148
23 Ga0105238_10015785 3300009551 Bacteria 7645
24 Ga0105238_10022203 3300009551 Bacteria 6470
25 Ga0157375_10000048 3300013308 Bacteria 140600
26 Ga0163163_10000063 3300014325 Bacteria 117632
27 Ga0163163_10214858 3300014325 Bacteria 1972
28 Ga0207695_10112954 3300025913 Bacteria 2693
29 Ga0207663_10000590 3300025916 Bacteria 16085
30 Ga0207646_10054538 3300025922 Bacteria 3575
31 Ga0207694_10010478 3300025924 Bacteria 6991
32 Ga0207694_10043917 3300025924 Bacteria 3450
33 Ga0207670_10005928 3300025936 Bacteria 6745
34 Ga0207667_10110801 3300025949 Bacteria 2831
35 Ga0207667_10128059 3300025949 Unclassified 2615
36 Ga0207651_10208023 3300025960 Bacteria 1573
37 Ga0207703_10123039 3300026035 Bacteria 2230
38 Ga0207708_10061720 3300026075 Bacteria 2862
39 Ga0207702_10000630 3300026078 Bacteria 38742
40 Ga0207702_10080928 3300026078 Bacteria 2819
41 Ga0207702_10122335 3300026078 Bacteria 2330
42 Ga0207674_10012806 3300026116 Bacteria 9364
43 Ga0207428_10256984 3300027907 Bacteria 1301
44 Ga0265337_1001497 3300028556 Bacteria 11459
45 Ga0265337_1006155 3300028556 Bacteria 4665
46 Ga0265337_1023291 3300028556 Bacteria 1906
47 Ga0265337_1053362 3300028556 Unclassified 1133
48 Ga0265319_1000003 3300028563 Bacteria 340561
49 Ga0265319_1011358 3300028563 Bacteria 3650
50 Ga0265334_10015140 3300028573 Bacteria 3208
51 Ga0265323_10059369 3300028653 Unclassified 1334
52 Ga0265336_10001836 3300028666 Bacteria 9244
53 Ga0265336_10002069 3300028666 Bacteria 8542
54 Ga0265336_10007115 3300028666 Bacteria 3997
55 Ga0265338_10000810 3300028800 Bacteria 52720
56 Ga0265338_10000872 3300028800 Bacteria 51071
57 Ga0265338_10003843 3300028800 Bacteria 20845
58 Ga0265338_10006869 3300028800 Bacteria 14327
59 Ga0265338_10008002 3300028800 Bacteria 12942
60 Ga0265338_10011440 3300028800 Bacteria 10248
61 Ga0265338_10012913 3300028800 Bacteria 9488
62 Ga0265338_10024789 3300028800 Bacteria 6113
63 Ga0265338_10027496 3300028800 Bacteria 5704
64 Ga0265338_10030782 3300028800 Bacteria 5276
65 Ga0265338_10031377 3300028800 Bacteria 5211
66 Ga0265338_10043907 3300028800 Bacteria 4137
67 Ga0265338_10047035 3300028800 Bacteria 3945
68 Ga0265338_10073693 3300028800 Bacteria 2908
69 Ga0265338_10073768 3300028800 Bacteria 2907
70 Ga0265338_10080220 3300028800 Unclassified 2742
71 Ga0265338_10086779 3300028800 Bacteria 2602
72 Ga0265324_10001551 3300029957 Bacteria 12860
73 Ga0265324_10006223 3300029957 Bacteria 5020
74 Ga0265324_10014477 3300029957 Unclassified 2918
75 Ga0265324_10018664 3300029957 Bacteria 2505
76 Ga0265320_10000585 3300031240 Bacteria 28024
77 Ga0265320_10001549 3300031240 Bacteria 16619
78 Ga0265320_10022191 3300031240 Bacteria 3399
79 Ga0265320_10031368 3300031240 Bacteria 2730
80 Ga0265325_10053206 3300031241 Unclassified 2077
81 Ga0265325_10065687 3300031241 Unclassified 1831
82 Ga0265329_10001749 3300031242 Bacteria 10338
83 Ga0265340_10000269 3300031247 Bacteria 26964
84 Ga0265340_10009117 3300031247 Bacteria 5335
85 Ga0265340_10047844 3300031247 Bacteria 2081
86 Ga0265327_10001754 3300031251 Bacteria 25646
87 Ga0265327_10005884 3300031251 Bacteria 10020
88 Ga0265327_10027794 3300031251 Bacteria 3249
89 Ga0265327_10030264 3300031251 Bacteria 3063
90 Ga0265316_10034340 3300031344 Bacteria 4120
91 Ga0265316_10103323 3300031344 Bacteria 2163
92 Ga0265313_10015121 3300031595 Unclassified 4516
93 Ga0265313_10048691 3300031595 Unclassified 2044
94 Ga0265314_10000284 3300031711 Bacteria 73660
95 Ga0373950_0009355 3300034818 Bacteria 1563
96 Ga0373928_0000037 3300035084 Bacteria 22767
97 Ga0373944_0000146 3300035089 Bacteria 13833
98 Ga0373949_0001247 3300035090 Bacteria 7488
99 Ga0373951_0000623 3300035091 Bacteria 9751
100 Ga0373932_0000001 3300035112 Bacteria 1459067
101 Ga0373955_0070249 3300035172 Bacteria 1956
102 Ga0373962_0000010 3300035242 Bacteria 53641
103 Ga0373931_0000002 3300035691 Bacteria 599830
104 Ga0373927_0006097 3300035695 Bacteria 8257
105 Ga0373927_0049160 3300035695 Bacteria 2727
106 Ga0373937_0051661 3300036401 Bacteria 3768
107 Ga0373925_0002958 3300037068 Bacteria 13417
108 Ga0373925_0003675 3300037068 Bacteria 11805
109 Ga0395900_0240651 3300037418 Bacteria 1816
110 Ga0451577_0012842 3300042876 Bacteria 7862
111 Ga0451577_0234073 3300042876 Bacteria 1661
112 Ga0453684_0004306 3300044712 Bacteria 30332
113 Ga0453684_0202503 3300044712 Unclassified 2313
114 Ga0451576_0027109 3300045051 Bacteria 6158
115 Ga0495651_0145538 3300046462 Unclassified 1714
116 Ga0495628_0046757 3300046516 Bacteria 3436
117 Ga0495630_0026985 3300046517 Bacteria 4257
118 Ga0495630_0068703 3300046517 Bacteria 2665
119 Ga0495666_0039567 3300046526 Bacteria 2289
120 Ga0495652_0065102 3300046529 Bacteria 3064
121 Ga0495586_0004324 3300046535 Bacteria 7591
122 Ga0495586_0024907 3300046535 Bacteria 3200
123 Ga0495622_0008096 3300046557 Bacteria 4872
124 Ga0495634_0038329 3300046642 Unclassified 3269
125 Ga0495599_0015932 3300046678 Bacteria 4666
126 Ga0495613_0000962 3300046689 Bacteria 22024
127 Ga0495674_0081528 3300047319 Unclassified 2775
128 Ga0495680_0090909 3300047322 Unclassified 2289
129 Ga0495684_0237732 3300047471 Bacteria 1330
130 Ga0501031_0000084 3300049568 Bacteria 50157
131 Ga0501032_0007136 3300049569 Bacteria 8183
132 Ga0501033_0022403 3300049570 Bacteria 4766
133 Ga0501033_0087841 3300049570 Bacteria 2275
134 Ga0501034_0095403 3300049571 Bacteria 2971
135 Ga0501047_0175534 3300049581 Unclassified 2010
136 Ga0501072_0137123 3300049588 Bacteria 1951
137 Ga0501077_0149790 3300049593 Bacteria 1480
138 Ga0501080_0079458 3300049742 Unclassified 3050
139 Ga0501035_0003291 3300049822 Bacteria 15489
140 Ga0501035_0083910 3300049822 Bacteria 2810
141 Ga0501044_0001404 3300049823 Bacteria 28255
142 nmdc:mga09592_207143_c1 3300050508 Bacteria 1698
143 nmdc:mga08y16_29693_c1 3300050511 Bacteria 5757
144 nmdc:mga08y16_55852_c1 3300050511 Unclassified 4126
145 Ga0500650_0028679 3300053098 Bacteria 2515
146 Ga0530510_0012033 3300061734 Bacteria 6070

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049593 Ga0501077_0149790 Ga0501077_0149790_28_1029 326
2 3300028556 Ga0265337_1053362 Ga0265337_10533621 334
3 3300005364 Ga0070673_100186855 Ga0070673_1001868551 359
4 3300005544 Ga0070686_100052488 Ga0070686_1000524882 359
5 3300025913 Ga0207695_10112954 Ga0207695_101129543 359
6 3300005545 Ga0070695_100254256 Ga0070695_1002542561 361
7 3300029957 Ga0265324_10006223 Ga0265324_100062234 369
8 3300035172 Ga0373955_0070249 Ga0373955_0070249_183_1316 371
9 3300046516 Ga0495628_0046757 Ga0495628_0046757_901_2034 371
10 3300005614 Ga0068856_100000017 Ga0068856_10000001746 372
11 3300026078 Ga0207702_10000630 Ga0207702_1000063034 372
12 3300049588 Ga0501072_0137123 Ga0501072_0137123_541_1680 372
13 3300005468 Ga0070707_100161536 Ga0070707_1001615362 373
14 3300005536 Ga0070697_100033739 Ga0070697_1000337392 373
15 3300009094 Ga0111539_10074815 Ga0111539_100748152 373
16 3300037418 Ga0395900_0240651 Ga0395900_0240651_503_1642 373
17 3300050511 nmdc:mga08y16_29693_c1 nmdc:mga08y16_29693_c1_4254_5399 373
18 3300061734 Ga0530510_0012033 Ga0530510_0012033_1791_2933 373
19 3300028800 Ga0265338_10000872 Ga0265338_1000087216 374
20 3300049571 Ga0501034_0095403 Ga0501034_0095403_1659_2804 374
21 3300025922 Ga0207646_10054538 Ga0207646_100545383 375
22 3300046526 Ga0495666_0039567 Ga0495666_0039567_231_1400 379
23 3300005530 Ga0070679_100304268 Ga0070679_1003042682 380
24 3300005577 Ga0068857_100007626 Ga0068857_1000076266 380
25 3300005617 Ga0068859_100034893 Ga0068859_1000348931 380
26 3300005842 Ga0068858_100151045 Ga0068858_1001510452 380
27 3300006844 Ga0075428_100003743 Ga0075428_1000037433 380
28 3300006931 Ga0097620_100034893 Ga0097620_1000348932 380
29 3300009093 Ga0105240_10089388 Ga0105240_100893882 380
30 3300009094 Ga0111539_10015345 Ga0111539_100153456 380
31 3300009176 Ga0105242_10133192 Ga0105242_101331922 380
32 3300013308 Ga0157375_10000048 Ga0157375_100000489 380
33 3300014325 Ga0163163_10000063 Ga0163163_1000006381 380
34 3300025936 Ga0207670_10005928 Ga0207670_100059283 380
35 3300026035 Ga0207703_10123039 Ga0207703_101230392 380
36 3300026075 Ga0207708_10061720 Ga0207708_100617202 380
37 3300026116 Ga0207674_10012806 Ga0207674_100128064 380
38 3300027907 Ga0207428_10256984 Ga0207428_102569841 380
39 3300028800 Ga0265338_10043907 Ga0265338_100439073 380
40 3300029957 Ga0265324_10014477 Ga0265324_100144772 380
41 3300031242 Ga0265329_10001749 Ga0265329_100017498 380
42 3300031711 Ga0265314_10000284 Ga0265314_1000028414 380
43 3300042876 Ga0451577_0012842 Ga0451577_0012842_800_1951 380
44 3300044712 Ga0453684_0004306 Ga0453684_0004306_14006_15169 380
45 3300044712 Ga0453684_0202503 Ga0453684_0202503_532_1686 380
46 3300045051 Ga0451576_0027109 Ga0451576_0027109_3759_4973 380
47 3300046462 Ga0495651_0145538 Ga0495651_0145538_454_1620 380
48 3300049581 Ga0501047_0175534 Ga0501047_0175534_831_1979 380
49 3300050511 nmdc:mga08y16_55852_c1 nmdc:mga08y16_55852_c1_2848_4002 380
50 3300003320 rootH2_10038281 rootH2_100382813 381
51 3300005330 Ga0070690_100089940 Ga0070690_1000899402 381
52 3300005563 Ga0068855_100152544 Ga0068855_1001525441 381
53 3300005563 Ga0068855_100203601 Ga0068855_1002036012 381
54 3300005563 Ga0068855_100247194 Ga0068855_1002471942 381
55 3300005614 Ga0068856_100231786 Ga0068856_1002317861 381
56 3300009551 Ga0105238_10015785 Ga0105238_100157855 381
57 3300009551 Ga0105238_10022203 Ga0105238_100222032 381
58 3300014325 Ga0163163_10214858 Ga0163163_102148581 381
59 3300025916 Ga0207663_10000590 Ga0207663_1000059011 381
60 3300025924 Ga0207694_10010478 Ga0207694_100104784 381
61 3300025924 Ga0207694_10043917 Ga0207694_100439175 381
62 3300025949 Ga0207667_10110801 Ga0207667_101108011 381
63 3300025949 Ga0207667_10128059 Ga0207667_101280591 381
64 3300025960 Ga0207651_10208023 Ga0207651_102080231 381
65 3300026078 Ga0207702_10080928 Ga0207702_100809282 381
66 3300026078 Ga0207702_10122335 Ga0207702_101223351 381
67 3300028556 Ga0265337_1001497 Ga0265337_10014973 381
68 3300028556 Ga0265337_1006155 Ga0265337_10061554 381
69 3300028556 Ga0265337_1023291 Ga0265337_10232911 381
70 3300028563 Ga0265319_1000003 Ga0265319_1000003205 381
71 3300028563 Ga0265319_1011358 Ga0265319_10113583 381
72 3300028573 Ga0265334_10015140 Ga0265334_100151402 381
73 3300028653 Ga0265323_10059369 Ga0265323_100593691 381
74 3300028666 Ga0265336_10001836 Ga0265336_100018363 381
75 3300028666 Ga0265336_10002069 Ga0265336_100020697 381
76 3300028666 Ga0265336_10007115 Ga0265336_100071154 381
77 3300028800 Ga0265338_10000810 Ga0265338_1000081028 381
78 3300028800 Ga0265338_10003843 Ga0265338_1000384315 381
79 3300028800 Ga0265338_10006869 Ga0265338_100068693 381
80 3300028800 Ga0265338_10008002 Ga0265338_1000800211 381
81 3300028800 Ga0265338_10011440 Ga0265338_1001144011 381
82 3300028800 Ga0265338_10012913 Ga0265338_100129133 381
83 3300028800 Ga0265338_10024789 Ga0265338_100247891 381
84 3300028800 Ga0265338_10027496 Ga0265338_100274965 381
85 3300028800 Ga0265338_10030782 Ga0265338_100307823 381
86 3300028800 Ga0265338_10031377 Ga0265338_100313772 381
87 3300028800 Ga0265338_10047035 Ga0265338_100470353 381
88 3300028800 Ga0265338_10073693 Ga0265338_100736931 381
89 3300028800 Ga0265338_10073768 Ga0265338_100737682 381
90 3300028800 Ga0265338_10080220 Ga0265338_100802202 381
91 3300028800 Ga0265338_10086779 Ga0265338_100867792 381
92 3300029957 Ga0265324_10001551 Ga0265324_100015511 381
93 3300029957 Ga0265324_10018664 Ga0265324_100186642 381
94 3300031240 Ga0265320_10000585 Ga0265320_1000058511 381
95 3300031240 Ga0265320_10001549 Ga0265320_100015499 381
96 3300031240 Ga0265320_10022191 Ga0265320_100221911 381
97 3300031240 Ga0265320_10031368 Ga0265320_100313683 381
98 3300031241 Ga0265325_10053206 Ga0265325_100532061 381
99 3300031241 Ga0265325_10065687 Ga0265325_100656871 381
100 3300031247 Ga0265340_10000269 Ga0265340_1000026922 381
101 3300031247 Ga0265340_10009117 Ga0265340_100091174 381
102 3300031247 Ga0265340_10047844 Ga0265340_100478443 381
103 3300031251 Ga0265327_10001754 Ga0265327_1000175412 381
104 3300031251 Ga0265327_10005884 Ga0265327_100058842 381
105 3300031251 Ga0265327_10027794 Ga0265327_100277942 381
106 3300031251 Ga0265327_10030264 Ga0265327_100302644 381
107 3300031344 Ga0265316_10034340 Ga0265316_100343402 381
108 3300031344 Ga0265316_10103323 Ga0265316_101033231 381
109 3300031595 Ga0265313_10015121 Ga0265313_100151213 381
110 3300031595 Ga0265313_10048691 Ga0265313_100486912 381
111 3300034818 Ga0373950_0009355 Ga0373950_0009355_330_1499 381
112 3300035084 Ga0373928_0000037 Ga0373928_0000037_3318_4577 381
113 3300035089 Ga0373944_0000146 Ga0373944_0000146_4550_5809 381
114 3300035090 Ga0373949_0001247 Ga0373949_0001247_631_1890 381
115 3300035091 Ga0373951_0000623 Ga0373951_0000623_939_2198 381
116 3300035112 Ga0373932_0000001 Ga0373932_0000001_1448117_1449376 381
117 3300035242 Ga0373962_0000010 Ga0373962_0000010_46940_48199 381
118 3300035691 Ga0373931_0000002 Ga0373931_0000002_46022_47281 381
119 3300035695 Ga0373927_0006097 Ga0373927_0006097_3262_4413 381
120 3300035695 Ga0373927_0049160 Ga0373927_0049160_324_1583 381
121 3300036401 Ga0373937_0051661 Ga0373937_0051661_789_1961 381
122 3300037068 Ga0373925_0002958 Ga0373925_0002958_10257_11408 381
123 3300037068 Ga0373925_0003675 Ga0373925_0003675_5581_6840 381
124 3300042876 Ga0451577_0234073 Ga0451577_0234073_392_1540 381
125 3300046517 Ga0495630_0026985 Ga0495630_0026985_3006_4229 381
126 3300046517 Ga0495630_0068703 Ga0495630_0068703_1319_2491 381
127 3300046529 Ga0495652_0065102 Ga0495652_0065102_1745_2917 381
128 3300046535 Ga0495586_0004324 Ga0495586_0004324_6241_7389 381
129 3300046535 Ga0495586_0024907 Ga0495586_0024907_1536_2759 381
130 3300046557 Ga0495622_0008096 Ga0495622_0008096_2247_3395 381
131 3300046642 Ga0495634_0038329 Ga0495634_0038329_180_1352 381
132 3300046678 Ga0495599_0015932 Ga0495599_0015932_3070_4242 381
133 3300046689 Ga0495613_0000962 Ga0495613_0000962_17000_18148 381
134 3300047319 Ga0495674_0081528 Ga0495674_0081528_1396_2568 381
135 3300047322 Ga0495680_0090909 Ga0495680_0090909_622_1959 381
136 3300047471 Ga0495684_0237732 Ga0495684_0237732_139_1311 381
137 3300049568 Ga0501031_0000084 Ga0501031_0000084_8988_10319 381
138 3300049569 Ga0501032_0007136 Ga0501032_0007136_2667_3998 381
139 3300049570 Ga0501033_0022403 Ga0501033_0022403_1860_3191 381
140 3300049570 Ga0501033_0087841 Ga0501033_0087841_634_1782 381
141 3300049742 Ga0501080_0079458 Ga0501080_0079458_165_1337 381
142 3300049822 Ga0501035_0003291 Ga0501035_0003291_1566_2897 381
143 3300049822 Ga0501035_0083910 Ga0501035_0083910_1322_2470 381
144 3300049823 Ga0501044_0001404 Ga0501044_0001404_15937_17268 381
145 3300050508 nmdc:mga09592_207143_c1 nmdc:mga09592_207143_c1_398_1558 381
146 3300053098 Ga0500650_0028679 Ga0500650_0028679_217_1368 381

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00266

Aminotran_5

Aminotransferase class-V

67

430

0.95

PF01212

Beta_elim_lyase

Beta-eliminating lyase

104

344

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
4r5f-assembly1.cif.gz_A-2 x-ray structure of the d199k mutant of the cysteine desulfurase iscs from a. fulgidus 0.9466 6 381
1ecx-assembly1.cif.gz_B nifs-like protein 0.9449 3 377
1ecx-assembly1.cif.gz_A nifs-like protein 0.9428 3 377
1ecx-assembly1.cif.gz_B nifs-like protein 0.9398 3 377
4hvk-assembly1.cif.gz_A-2 crystal structure and functional studies of an unusual l-cysteine desulfurase from archaeoglobus fulgidus. 0.939 6 381
ID Description Score Start End Superfamily
4r5fA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.946 16 254 3.40.640.10
af_Q2FXV4_28_254_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9445 31 254 3.40.640.10
af_Q2FXV4_2_370_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9422 5 371 3.40.640.10
af_Q2FXV4_2_370_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9347 5 371 3.40.640.10
3lvjA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9337 16 253 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A2N2CGK8-F1-model_v4 Cysteine desulfurase NifS 0.9694 3 177 GO:0016226
GO:0031071
AF-A0A3M1YYK2-F1-model_v4 Aminotransferase class V-fold PLP-dependent enzyme 0.964 2 182 GO:0008483
GO:0016226
GO:0031071
AF-A0A382YQQ0-F1-model_v4 Aminotransferase class V domain-containing protein 0.9625 1 159 GO:0016226
GO:0031071
AF-A0A6N9XLZ5-F1-model_v4 deleted 0.9618 48 179
AF-A0A2D6NCC8-F1-model_v4 Cysteine desulfurase NifS 0.9602 1 380 GO:0016226
GO:0031071
GO:0046872
GO:0051536

Feature Viewer

pLDDT pTM Quality
91.89 0.91 High
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Predicted Structure (AlphaFold2)

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