F198577

General Info

Members Datasets Scaffolds Average Seq Length
146 126 292 473

Family's Representative Sequence

Representative Sequence 3300048907|Ga0496104_0075363|Ga0496104_0075363_868_2442
Length 524
Sequence LASLSRPVDRSQWDMRCALLIKSNPIVFGTVEGQQPMSVTSARVPHSKEIRMSDSTTIHEARLLDRIQAPAGEGREILDAATREVIGRAPVHTGADLDDAIARARSAQPTWDALGHGERSALLLAAADSIDANAEELARLLSREQGKPLNGPNARFELGACSAWLRTAATTPLEPEVIIDDGEVHAELHYRAIGVVGAIGPWNWPLMITIWQIGPALRMGNTVVVKPSGFTPLSVLTLLSVMNEVLPADVLIGVSGDREVGARLASHPDVAKVMFTGSTETGRKIIESSAGNLARLTLELGGNDAGIVLPGADPAAIAQNLFWGAFINTGQTCAALKRLYVHDSVYEEVISALADVAVQMPMGNGLDETSVLGPLQNKAQFDIVSRLVEDARAHGGRVVVGGSPATELGELFYPVTIVADVADGVALVDEEQFGPALPVIRYSDVDEAISSANRLDVGLGASVWGDRDTAREVAARIQAGTVWINSHGGVHPMIPFGGVKSSGYGLEFGVEGLKSVAVPQIING

Samples

Sample ID Description Type Environment
1 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
5 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
6 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
7 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
14 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
15 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
16 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
17 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
18 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
19 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
20 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
21 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
22 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
23 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
24 3300009763 Root nodule microbial communities of legume samples collected from Mexico - Siratro Mexico nodule mix Metagenome Nodule
25 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
26 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
27 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
28 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
29 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
30 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
31 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
33 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
34 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
35 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
36 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
46 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
47 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
48 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
49 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
50 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
51 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
52 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
53 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
54 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
55 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
56 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
57 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
58 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
59 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
60 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
61 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
62 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
63 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
64 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
65 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
66 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
67 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
68 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
69 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
70 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
71 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
72 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
73 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
74 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
75 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
80 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
81 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
82 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
83 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
84 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
85 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
86 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
87 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
88 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
89 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
90 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
91 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
92 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
93 2534681796 Rhizobium grahamii CCGE 502 Isolate Nodule
94 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
95 2565956521 Vibrio rhizosphaerae DSM 18581 Isolate Rhizosphere
96 2582580736 Prauserella sp. Am3 Isolate Unclassified
97 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
98 2617270742 Rhizobium miluonense HAMBI 2971 Isolate Nodule
99 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
100 2643221566 Microbacterium sp. Root166 Isolate Unclassified
101 2643221599 Rhizobium sp. Root708 Isolate Unclassified
102 2643221626 Ensifer sp. Root31 Isolate Unclassified
103 2643221630 Microbacterium sp. Root322 Isolate Unclassified
104 2643221649 Leifsonia sp. Root4 Isolate Unclassified
105 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
106 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
107 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
108 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
109 2808606371 Arthrobacter sp. SLBN-53 Isolate Unclassified
110 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
111 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
112 2870801768 Micrococcus endophyticus DSM 17945 Isolate Unclassified
113 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
114 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
115 2919395869 Microbacterium resistens 2980 Isolate Unclassified
116 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
117 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
118 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
119 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
120 3005452660 Rhizobium grahamii BG7 Isolate Unclassified
121 8002745576 Marinomonas spartinae USM8 Isolate Rhizosphere
122 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
123 8005542996 Rhizobium grahamii CCGM3 Isolate Unclassified
124 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
125 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere
126 8055431914 Allorhizobium sonneratiae BGMRC 0089 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 76.03
Metatranscriptomes 0
Isolates 23.97

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.9
Nodule 2.74
Rhizoplane 14.38
Rhizosphere 50.68
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496104_0075363 3300048907 Bacteria 3212
2 JGI24740J21852_10010336 3300001979 Bacteria 3604
3 JGI25154J39366_1002382 3300002738 Bacteria 4936
4 JGI25152J39213_1008838 3300002773 Bacteria 2457
5 Ga0055538_1000016 3300003751 Bacteria 305460
6 Ga0055536_1000835 3300003781 Bacteria 20316
7 Ga0055528_1010025 3300003790 Bacteria 3897
8 Ga0070680_100027391 3300005336 Bacteria 4563
9 Ga0070661_100066010 3300005344 Bacteria 2659
10 Ga0070671_100051982 3300005355 Bacteria 3408
11 Ga0070681_10023684 3300005458 Bacteria 6180
12 Ga0068855_100000082 3300005563 Bacteria 114668
13 Ga0068852_100000260 3300005616 Bacteria 35545
14 Ga0068863_100053389 3300005841 Bacteria 3831
15 Ga0068863_100083310 3300005841 Bacteria 3030
16 Ga0081540_1005166 3300005983 Bacteria 9769
17 Ga0075432_10001378 3300006058 Bacteria 7901
18 Ga0070712_100041793 3300006175 Bacteria 3150
19 Ga0075370_10075292 3300006353 Bacteria 1935
20 Ga0105244_10001723 3300009036 Bacteria 17234
21 Ga0105247_10007015 3300009101 Bacteria 6934
22 Ga0105241_10019838 3300009174 Bacteria 4962
23 Ga0105248_10000365 3300009177 Bacteria 52722
24 Ga0105238_10001157 3300009551 Bacteria 26599
25 Ga0123340_1040870 3300009763 Bacteria 2159
26 Ga0105239_10001219 3300010375 Bacteria 35074
27 Ga0157369_10001984 3300013105 Bacteria 24634
28 Ga0157374_10015347 3300013296 Bacteria 6718
29 Ga0163162_10073678 3300013306 Bacteria 3471
30 Ga0163162_10249257 3300013306 Bacteria 1908
31 Ga0157372_10054983 3300013307 Bacteria 4444
32 Ga0163163_10022160 3300014325 Bacteria 6010
33 Ga0209563_101264 3300025230 Bacteria 6931
34 Ga0209646_1000192 3300025246 Bacteria 75005
35 Ga0209129_1008698 3300025258 Bacteria 2786
36 Ga0209564_1020939 3300025295 Bacteria 2375
37 Ga0209256_1010686 3300025299 Bacteria 3800
38 Ga0209051_1000643 3300025303 Bacteria 39847
39 Ga0209051_1019662 3300025303 Bacteria 2938
40 Ga0207655_1001461 3300025728 Bacteria 21838
41 Ga0207695_10022604 3300025913 Bacteria 7132
42 Ga0207693_10043780 3300025915 Bacteria 3520
43 Ga0207644_10068660 3300025931 Bacteria 2586
44 Ga0207711_10000340 3300025941 Bacteria 49514
45 Ga0207667_10000115 3300025949 Bacteria 128732
46 Ga0207668_10147316 3300025972 Bacteria 1818
47 Ga0207698_10000295 3300026142 Bacteria 30103
48 Ga0207428_10098751 3300027907 Bacteria 2259
49 Ga0307405_10006770 3300031731 Bacteria 5669
50 Ga0307406_10001608 3300031901 Bacteria 12413
51 Ga0307406_10008732 3300031901 Bacteria 5663
52 Ga0307412_10075360 3300031911 Bacteria 2314
53 Ga0307409_100040797 3300031995 Bacteria 3460
54 Ga0307414_10026981 3300032004 Bacteria 3704
55 Ga0373925_0000066 3300037068 Bacteria 114044
56 Ga0395899_0001280 3300037312 Bacteria 21799
57 Ga0395900_0269761 3300037418 Bacteria 1697
58 Ga0466963_0010526 3300044694 Bacteria 5602
59 Ga0466970_0000437 3300044765 Bacteria 20425
60 Ga0495645_0031770 3300046543 Bacteria 3848
61 Ga0496102_0028328 3300048905 Bacteria 5002
62 Ga0496102_0099911 3300048905 Bacteria 2694
63 Ga0496103_0018623 3300048906 Bacteria 4166
64 Ga0496103_0025224 3300048906 Bacteria 3592
65 Ga0496104_0027098 3300048907 Bacteria 5300
66 Ga0496105_0017875 3300048908 Bacteria 5689
67 Ga0496108_0009743 3300048911 Bacteria 7783
68 Ga0496108_0098827 3300048911 Bacteria 2487
69 Ga0496109_0053986 3300048912 Bacteria 3667
70 Ga0496109_0057909 3300048912 Bacteria 3539
71 Ga0496110_0153596 3300048913 Bacteria 2085
72 Ga0496111_0020809 3300048914 Bacteria 4573
73 Ga0496111_0059168 3300048914 Bacteria 2776
74 Ga0496112_0142077 3300048915 Bacteria 2370
75 Ga0496112_0180815 3300048915 Bacteria 2073
76 Ga0496113_0047782 3300048916 Bacteria 3181
77 Ga0496114_0003257 3300048917 Bacteria 12461
78 Ga0496114_0058234 3300048917 Bacteria 3226
79 Ga0496114_0107517 3300048917 Bacteria 2387
80 Ga0496115_0025175 3300048918 Bacteria 4632
81 Ga0496116_0045768 3300048919 Bacteria 2959
82 Ga0496117_0000394 3300048920 Bacteria 74632
83 Ga0496118_0011682 3300048921 Bacteria 8538
84 Ga0496118_0068509 3300048921 Bacteria 2576
85 Ga0496119_0024380 3300048922 Bacteria 4257
86 Ga0496122_0022561 3300048925 Bacteria 5590
87 Ga0496122_0046129 3300048925 Bacteria 3379
88 Ga0496125_0007997 3300048928 Bacteria 11168
89 Ga0496125_0022686 3300048928 Bacteria 5821
90 Ga0496126_0001734 3300048929 Bacteria 32346
91 Ga0496126_0008607 3300048929 Bacteria 10978
92 Ga0501034_0001033 3300049571 Bacteria 39834
93 Ga0501038_0042424 3300049574 Bacteria 3962
94 Ga0501039_0081494 3300049575 Bacteria 2519
95 Ga0501043_0010594 3300049579 Bacteria 7218
96 Ga0501070_0001028 3300049586 Bacteria 25074
97 Ga0501070_0001607 3300049586 Bacteria 20050
98 Ga0501070_0003916 3300049586 Bacteria 12847
99 Ga0501071_0041377 3300049587 Bacteria 3300
100 Ga0501072_0009950 3300049588 Bacteria 7231
101 Ga0501073_0056987 3300049589 Bacteria 2732
102 Ga0501074_0012203 3300049590 Bacteria 6247
103 Ga0501075_0054351 3300049591 Bacteria 3012
104 Ga0501076_0064948 3300049592 Bacteria 2909
105 Ga0501080_0000025 3300049742 Bacteria 89908
106 Ga0501035_0018549 3300049822 Bacteria 6409
107 Ga0500595_001511 3300053119 Bacteria 12357
108 Ga0500568_0007819 3300053139 Bacteria 5208
109 Ga0501084_0015928 3300054114 Bacteria 6237
110 Ga0501082_0081760 3300060353 Bacteria 2787
111 Ga0530510_0017051 3300061734 Bacteria 5143
112 2535520419 2534681796 Bacteria 7146037
113 2553003562 2551306416 Bacteria 6152985
114 2566035436 2565956521 Bacteria 4468993
115 2583151523 2582580736 Bacteria 5325865
116 2585200847 2582581294 Bacteria 6626667
117 2617380943 2617270742 Bacteria 6808054
118 2643734970 2643221542 Bacteria 3563959
119 2643846888 2643221566 Bacteria 3460379
120 2644003533 2643221599 Bacteria 6292121
121 2644148300 2643221626 Bacteria 8069654
122 2644173130 2643221630 Bacteria 3601215
123 2644278677 2643221649 Bacteria 3867359
124 2644679347 2643221724 Bacteria 3593515
125 2730228866 2728369380 Bacteria 3620317
126 2747952944 2747842429 Bacteria 3914386
127 2778174724 2775507266 Bacteria 7392367
128 2808898752 2808606371 Bacteria 4251511
129 2852665717 2852663356 Bacteria 4090475
130 2857727181 2857723135 Bacteria 4217853
131 2870804150 2870801768 Bacteria 2710986
132 2895660697 2895660088 Bacteria 3782833
133 2919080824 2919079590 Bacteria 5946433
134 2919396667 2919395869 Bacteria 3704152
135 2939633553 2939631187 Bacteria 6118131
136 2946043361 2946041624 Bacteria 4191385
137 2977265757 2977264416 Bacteria 3750737
138 2995728528 2995726249 Bacteria 3470435
139 3005458447 3005452660 Bacteria 5889319
140 8002749958 8002745576 Bacteria 4840272
141 8004183688 8004182704 Bacteria 3391155
142 8005548171 8005542996 Bacteria 7077758
143 8055036540 8055034563 Bacteria 3562128
144 8055038884 8055037949 Bacteria 3337834
145 8055436144 8055431914 Bacteria 4551896
146 8055436174 8055431914 Bacteria 4551896
147 Ga0496104_0075363
148 JGI24740J21852_10010336
149 JGI25154J39366_1002382
150 JGI25152J39213_1008838
151 Ga0055538_1000016
152 Ga0055536_1000835
153 Ga0055528_1010025
154 Ga0070680_100027391
155 Ga0070661_100066010
156 Ga0070671_100051982
157 Ga0070681_10023684
158 Ga0068855_100000082
159 Ga0068852_100000260
160 Ga0068863_100053389
161 Ga0068863_100083310
162 Ga0081540_1005166
163 Ga0075432_10001378
164 Ga0070712_100041793
165 Ga0075370_10075292
166 Ga0105244_10001723
167 Ga0105247_10007015
168 Ga0105241_10019838
169 Ga0105248_10000365
170 Ga0105238_10001157
171 Ga0123340_1040870
172 Ga0105239_10001219
173 Ga0157369_10001984
174 Ga0157374_10015347
175 Ga0163162_10073678
176 Ga0163162_10249257
177 Ga0157372_10054983
178 Ga0163163_10022160
179 Ga0209563_101264
180 Ga0209646_1000192
181 Ga0209129_1008698
182 Ga0209564_1020939
183 Ga0209256_1010686
184 Ga0209051_1000643
185 Ga0209051_1019662
186 Ga0207655_1001461
187 Ga0207695_10022604
188 Ga0207693_10043780
189 Ga0207644_10068660
190 Ga0207711_10000340
191 Ga0207667_10000115
192 Ga0207668_10147316
193 Ga0207698_10000295
194 Ga0207428_10098751
195 Ga0307405_10006770
196 Ga0307406_10001608
197 Ga0307406_10008732
198 Ga0307412_10075360
199 Ga0307409_100040797
200 Ga0307414_10026981
201 Ga0373925_0000066
202 Ga0395899_0001280
203 Ga0395900_0269761
204 Ga0466963_0010526
205 Ga0466970_0000437
206 Ga0495645_0031770
207 Ga0496102_0028328
208 Ga0496102_0099911
209 Ga0496103_0018623
210 Ga0496103_0025224
211 Ga0496104_0027098
212 Ga0496105_0017875
213 Ga0496108_0009743
214 Ga0496108_0098827
215 Ga0496109_0053986
216 Ga0496109_0057909
217 Ga0496110_0153596
218 Ga0496111_0020809
219 Ga0496111_0059168
220 Ga0496112_0142077
221 Ga0496112_0180815
222 Ga0496113_0047782
223 Ga0496114_0003257
224 Ga0496114_0058234
225 Ga0496114_0107517
226 Ga0496115_0025175
227 Ga0496116_0045768
228 Ga0496117_0000394
229 Ga0496118_0011682
230 Ga0496118_0068509
231 Ga0496119_0024380
232 Ga0496122_0022561
233 Ga0496122_0046129
234 Ga0496125_0007997
235 Ga0496125_0022686
236 Ga0496126_0001734
237 Ga0496126_0008607
238 Ga0501034_0001033
239 Ga0501038_0042424
240 Ga0501039_0081494
241 Ga0501043_0010594
242 Ga0501070_0001028
243 Ga0501070_0001607
244 Ga0501070_0003916
245 Ga0501071_0041377
246 Ga0501072_0009950
247 Ga0501073_0056987
248 Ga0501074_0012203
249 Ga0501075_0054351
250 Ga0501076_0064948
251 Ga0501080_0000025
252 Ga0501035_0018549
253 Ga0500595_001511
254 Ga0500568_0007819
255 Ga0501084_0015928
256 Ga0501082_0081760
257 Ga0530510_0017051
258 2535520419
259 2553003562
260 2566035436
261 2583151523
262 2585200847
263 2617380943
264 2643734970
265 2643846888
266 2644003533
267 2644148300
268 2644173130
269 2644278677
270 2644679347
271 2730228866
272 2747952944
273 2778174724
274 2808898752
275 2852665717
276 2857727181
277 2870804150
278 2895660697
279 2919080824
280 2919396667
281 2939633553
282 2946043361
283 2977265757
284 2995728528
285 3005458447
286 8002749958
287 8004183688
288 8005548171
289 8055036540
290 8055038884
291 8055436144
292 8055436174

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00171

Aldedh

Aldehyde dehydrogenase family

67

522

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3vz0-assembly2.cif.gz_C structural insights into cofactor and substrate selection by gox0499 0.9619 23 470
7w5n-assembly1.cif.gz_A the crystal structure of the reduced form of gluconobacter oxydans wsh-004 sndh 0.9606 20 473
4v6h-assembly1.cif.gz_A crystal structure of succinate-semialdehyde dehydrogenase from burkholderia pseudomallei 0.9591 15 471
8dno-assembly1.cif.gz_A human brain aldehyde dehydrogenase 1 family, member a1 0.9583 19 471
3jz4-assembly1.cif.gz_B crystal structure of e. coli nadp dependent enzyme 0.9575 14 473
ID Description Score Start End Superfamily
af_A0A0G2KZR6_2_316_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9686 158 464 3.40.605.10
af_P25526_258_476_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9686 249 462 3.40.605.10
af_Q9URW9_34_486_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9663 20 468 3.40.605.10
af_I6X8S7_263_447_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9658 256 434 3.40.309.10
af_P54115_41_494_1.10.132.50 Mainly Alpha;Orthogonal Bundle;Topoisomerase I; Chain A, domain 4;ATP synthase (C/AC39) subunit, domain 3 0.9651 20 468 1.10.132.50
ID Description Score Start End GO Terms
AF-A0A7S1T8K0-F1-model_v4 Aldehyde dehydrogenase domain-containing protein 0.9787 138 453 GO:0016620
AF-A0A2R4M9A6-F1-model_v4 Aldehyde dehydrogenase 0.9759 16 472 GO:0016620
AF-A0A530BH51-F1-model_v4 Aldehyde dehydrogenase 0.9753 224 463 GO:0016620
AF-A0A3S4F1E0-F1-model_v4 Succinate-semialdehyde dehydrogenase (EC 1.2.1.16, EC 1.2.1.79) 0.9747 136 466 GO:0004777
GO:0005829
GO:0009450
GO:0036243
AF-A0A2Z5V886-F1-model_v4 Aldehyde dehydrogenase 1 family, member A2 0.974 139 460 GO:0005737
GO:0006629
GO:0016620

Map