F199028

General Info

Members Datasets Scaffolds Average Seq Length
146 132 292 450

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8054913762|8054915777
Length 493
Sequence TPPRPSAAAIPPRPSGAGVAPRPSAAGVAPRSRAVGPADAEVIRADAFAVALPVGRWSTDPAVVDAHRLDRSGWLPDGRPLGVAFAREVSDVQAVLRVAVARGVPVTVRGAGTGLAGGAAAGPGGVVLDLAGMNSIRELSVDDAVAVVEPGVITADLDAAAREVGLCYAPDPASAAISTIGGNIATNAGGLRCAKYGVTRESVLGLDVVLADGELISTGRRTVKGVAGYDLTGLFVGSEGTLGVVVGATVRLRPAPRATVTLAAYFDTVAAAVDAVTALGAAGIVPAVAELLDARTVRAVDAATGSDLAAHGEVFLLVQTDGSGAVEEADAAEAVLAGRARLVRRSADAATAETLLAARRAALPALERLGRVLIEDIAVPRGRLAQAVARVTEIGADTGVEIFTLAHAADGNLHPIIVVDPSLPEIPPQAWAAAEQIFALALELGGTVTGEHGVGVLKRRWLATELGSRSHDLQRQLRRVFDPTGILNPGRAL

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
3 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
4 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
5 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
6 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
7 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
8 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
9 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
10 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
11 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
12 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
13 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
14 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
15 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
20 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
22 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
23 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
24 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
25 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
26 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
27 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
28 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
29 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
30 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
31 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
32 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
33 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
34 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
35 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
36 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
37 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
38 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
39 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
40 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
41 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
42 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
43 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
44 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
45 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
46 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
47 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
48 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
49 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
50 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
51 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
52 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
53 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
54 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
55 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
56 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
57 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
58 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
59 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
60 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
61 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
62 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
63 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
64 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
65 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
66 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
67 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
68 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
69 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
70 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
71 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
72 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
73 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
74 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
75 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
76 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
77 8054913762 Frankia gtarii Agncl-10 Isolate Nodule
78 2527291627 Frankia casuarinae Thr Isolate Nodule
79 2527291629 Frankia sp. BMG5.23 Isolate Nodule
80 2537561592 Arthrobacter crystallopoietes BAB-32 Isolate Rhizosphere
81 2546825537 Frankia sp. CcI6 Isolate Rhizoplane
82 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
83 2576861822 Frankia sp. CeD Isolate Nodule
84 2579778521 Frankia torreyi CpI1-S Isolate Unclassified
85 2619618881 Frankia sp. ACN1ag Isolate Unclassified
86 2619619003 Frankia sp. CpI1-P Isolate Nodule
87 2626541554 Frankia sp. AvcI.1 Isolate Nodule
88 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
89 2684623036 Frankia sp. CgIM4 Isolate Nodule
90 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
91 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
92 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
93 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
94 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
95 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
96 2773857924 Frankia sp. CgIS1 Isolate Nodule
97 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
98 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
99 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
100 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
101 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
102 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
103 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
104 2891562705 Microbispora tritici MT50 Isolate Unclassified
105 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
106 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
107 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
108 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
109 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere
110 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
111 2919069694 Microbacterium sp. 1154 Isolate Unclassified
112 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
113 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
114 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
115 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
116 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
117 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
118 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
119 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
120 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
121 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
122 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
123 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
124 637000116 Frankia casuarinae CcI3 Isolate Nodule
125 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
126 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
127 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
128 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
129 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
130 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere
131 8054920844 Frankia tisae Agncl-8 Isolate Nodule
132 8055157932 Frankia umida Ag45/Mut15 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 61.64
Metatranscriptomes 0
Isolates 38.36

Biome Distribution

Category Percentage (%)
Aerial Root 0.68
Bulb 0
Endosphere 9.59
Nodule 8.22
Rhizoplane 6.16
Rhizosphere 43.84
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10041621 3300003320 Bacteria 5873
2 Ga0070671_100008164 3300005355 Bacteria 8380
3 Ga0070665_100060685 3300005548 Bacteria 3790
4 Ga0068863_100000322 3300005841 Bacteria 48726
5 Ga0081455_10000045 3300005937 Bacteria 128603
6 Ga0070715_10035584 3300006163 Bacteria 2049
7 Ga0075369_10010003 3300006186 Bacteria 3703
8 Ga0105244_10001694 3300009036 Bacteria 17409
9 Ga0105247_10000056 3300009101 Bacteria 133965
10 Ga0105248_10010669 3300009177 Bacteria 10134
11 Ga0157370_10010574 3300013104 Bacteria 9717
12 Ga0157379_10007332 3300014968 Bacteria 9543
13 Ga0157379_10008832 3300014968 Bacteria 8789
14 Ga0209148_1002663 3300025254 Bacteria 5751
15 Ga0207655_1002482 3300025728 Bacteria 14933
16 Ga0207710_10000084 3300025900 Bacteria 133802
17 Ga0207644_10005312 3300025931 Bacteria 8406
18 Ga0207711_10008184 3300025941 Bacteria 8754
19 Ga0207668_10002055 3300025972 Bacteria 11727
20 Ga0207668_10172895 3300025972 Bacteria 1696
21 Ga0207641_10001474 3300026088 Bacteria 23090
22 Ga0268266_10008733 3300028379 Bacteria 8981
23 Ga0307517_10025234 3300028786 Bacteria 7280
24 Ga0307408_100128871 3300031548 Bacteria 1971
25 Ga0307408_100162801 3300031548 Bacteria 1773
26 Ga0307408_100182848 3300031548 Bacteria 1683
27 Ga0307508_10142963 3300031616 Bacteria 1996
28 Ga0307514_10090267 3300031649 Bacteria 2236
29 Ga0307413_10049346 3300031824 Bacteria 2522
30 Ga0307410_10012982 3300031852 Bacteria 4841
31 Ga0307410_10023362 3300031852 Bacteria 3842
32 Ga0307410_10041838 3300031852 Bacteria 3024
33 Ga0307406_10160050 3300031901 Bacteria 1617
34 Ga0307407_10031358 3300031903 Bacteria 2878
35 Ga0307409_100013703 3300031995 Bacteria 5234
36 Ga0307409_100043290 3300031995 Bacteria 3379
37 Ga0307416_100014446 3300032002 Bacteria 5414
38 Ga0307416_100089693 3300032002 Bacteria 2633
39 Ga0395898_0028640 3300037466 Bacteria 5581
40 Ga0439442_003304 3300042002 Bacteria 3187
41 Ga0439449_0028403 3300042007 Bacteria 2085
42 Ga0466961_0001966 3300044693 Bacteria 12798
43 Ga0466959_0087297 3300045049 Bacteria 2244
44 Ga0495592_0120455 3300046454 Bacteria 1846
45 Ga0495629_0011225 3300046459 Bacteria 6505
46 Ga0495643_0002361 3300046522 Bacteria 15129
47 Ga0495652_0021617 3300046529 Bacteria 5718
48 Ga0495646_0004064 3300046680 Bacteria 9180
49 Ga0495658_0070429 3300046683 Bacteria 2029
50 Ga0495670_0005061 3300046691 Bacteria 6487
51 Ga0495672_0009965 3300047320 Bacteria 6819
52 Ga0495685_000456 3300047447 Bacteria 12751
53 Ga0495681_0008332 3300047470 Bacteria 6510
54 Ga0495602_0191629 3300048088 Bacteria 1567
55 Ga0496100_0001894 3300048903 Bacteria 10493
56 Ga0496101_0001969 3300048904 Bacteria 12442
57 Ga0496102_0000020 3300048905 Bacteria 260823
58 Ga0496103_0000011 3300048906 Bacteria 304506
59 Ga0496104_0148079 3300048907 Bacteria 2254
60 Ga0496105_0022019 3300048908 Bacteria 5160
61 Ga0496111_0024607 3300048914 Bacteria 4242
62 Ga0496116_0000067 3300048919 Bacteria 260793
63 Ga0496117_0000170 3300048920 Bacteria 136272
64 Ga0496117_0001045 3300048920 Bacteria 42245
65 Ga0496118_0000076 3300048921 Bacteria 193263
66 Ga0496118_0001725 3300048921 Bacteria 31843
67 Ga0496119_0000237 3300048922 Bacteria 77727
68 Ga0496119_0001513 3300048922 Bacteria 27787
69 Ga0496120_0000838 3300048923 Bacteria 43809
70 Ga0496120_0005494 3300048923 Bacteria 10089
71 Ga0496121_0008868 3300048924 Bacteria 11702
72 Ga0496122_0092003 3300048925 Bacteria 2063
73 Ga0496123_0029844 3300048926 Bacteria 4004
74 Ga0496124_0000075 3300048927 Bacteria 218086
75 Ga0496124_0017311 3300048927 Bacteria 6795
76 Ga0496125_0043318 3300048928 Bacteria 3822
77 Ga0496126_0000080 3300048929 Bacteria 221672
78 nmdc:mga0sz30_10321_c1 3300050516 Bacteria 3579
79 Ga0495601_0001844 3300053077 Bacteria 11784
80 Ga0500560_014272 3300053107 Bacteria 2113
81 Ga0500569_000938 3300053109 Bacteria 5237
82 Ga0500628_004506 3300053129 Bacteria 2307
83 Ga0500652_003104 3300053131 Bacteria 5011
84 Ga0500559_0000104 3300053136 Bacteria 65891
85 Ga0500561_0001695 3300053137 Bacteria 3616
86 Ga0500573_0022875 3300053140 Bacteria 3588
87 Ga0500579_037826 3300053143 Bacteria 3054
88 Ga0500600_0007078 3300053149 Bacteria 6729
89 Ga0500616_0017709 3300053153 Bacteria 4039
90 Ga0500616_0026875 3300053153 Bacteria 3181
91 8054915777 8054913762 Bacteria 7713009
92 2528203256 2527291627 Bacteria 5309833
93 2528214391 2527291629 Bacteria 5267418
94 2537900792 2537561592 Bacteria 4348607
95 2546947900 2546825537 Bacteria 5389291
96 2558907333 2558860112 Bacteria 9931328
97 2579749759 2576861822 Bacteria 5004595
98 2579857809 2579778521 Bacteria 7624758
99 2619855633 2619618881 Bacteria 7521104
100 2620353504 2619619003 Bacteria 7619552
101 2626635051 2626541554 Bacteria 7741902
102 2686538590 2684623035 Bacteria 8032739
103 2686541615 2684623036 Bacteria 5199090
104 2689990183 2687453743 Bacteria 8361025
105 2753300470 2751185788 Bacteria 4541048
106 2768647601 2767802112 Bacteria 6465194
107 2774379237 2773857758 Bacteria 3592392
108 2774391773 2773857762 Bacteria 5971770
109 2774398754 2773857763 Bacteria 4180068
110 2774864373 2773857924 Bacteria 5256821
111 2809197427 2808606439 Bacteria 5952208
112 2812352329 2811994878 Bacteria 5992952
113 2852680419 2852677369 Bacteria 3768884
114 2856744100 2856741275 Bacteria 8096094
115 2857481858 2857481737 Bacteria 4761446
116 2867352208 2867346516 Bacteria 7608576
117 2870623196 2870622029 Bacteria 3643329
118 2891564333 2891562705 Bacteria 8039471
119 2891970017 2891968417 Bacteria 5821697
120 2895887364 2895880812 Bacteria 11255272
121 2904510749 2904509784 Bacteria 3520416
122 2904779499 2904776348 Bacteria 4658726
123 2905929311 2905926851 Bacteria 4423176
124 2908679726 2908678064 Bacteria 3482747
125 2919070387 2919069694 Bacteria 3622919
126 2919541754 2919538618 Bacteria 4677069
127 2928107630 2928104781 Bacteria 3877447
128 2945920580 2945920336 Bacteria 4501603
129 2946039110 2946037020 Bacteria 4900426
130 2974296207 2974294766 Bacteria 3767688
131 2974302898 2974302888 Bacteria 4369871
132 2974327558 2974324384 Bacteria 3750535
133 2977229938 2977228692 Bacteria 3450105
134 2977238024 2977236895 Bacteria 3569373
135 2977265197 2977264416 Bacteria 3750737
136 2984544192 2984542743 Bacteria 3569378
137 3003001296 3002998708 Bacteria 11715108
138 637879744 637000116 Bacteria 5433628
139 8047710696 8047710418 Bacteria 11023148
140 8047902679 8047893842 Bacteria 11723082
141 8048136848 8048127548 Bacteria 11053136
142 8048370477 8048369669 Bacteria 11666822
143 8048388945 8048379754 Bacteria 11877923
144 8053953469 8053945823 Bacteria 8962862
145 8054926545 8054920844 Bacteria 7068637
146 8055160772 8055157932 Bacteria 6429399
147 rootH2_10041621
148 Ga0070671_100008164
149 Ga0070665_100060685
150 Ga0068863_100000322
151 Ga0081455_10000045
152 Ga0070715_10035584
153 Ga0075369_10010003
154 Ga0105244_10001694
155 Ga0105247_10000056
156 Ga0105248_10010669
157 Ga0157370_10010574
158 Ga0157379_10007332
159 Ga0157379_10008832
160 Ga0209148_1002663
161 Ga0207655_1002482
162 Ga0207710_10000084
163 Ga0207644_10005312
164 Ga0207711_10008184
165 Ga0207668_10002055
166 Ga0207668_10172895
167 Ga0207641_10001474
168 Ga0268266_10008733
169 Ga0307517_10025234
170 Ga0307408_100128871
171 Ga0307408_100162801
172 Ga0307408_100182848
173 Ga0307508_10142963
174 Ga0307514_10090267
175 Ga0307413_10049346
176 Ga0307410_10012982
177 Ga0307410_10023362
178 Ga0307410_10041838
179 Ga0307406_10160050
180 Ga0307407_10031358
181 Ga0307409_100013703
182 Ga0307409_100043290
183 Ga0307416_100014446
184 Ga0307416_100089693
185 Ga0395898_0028640
186 Ga0439442_003304
187 Ga0439449_0028403
188 Ga0466961_0001966
189 Ga0466959_0087297
190 Ga0495592_0120455
191 Ga0495629_0011225
192 Ga0495643_0002361
193 Ga0495652_0021617
194 Ga0495646_0004064
195 Ga0495658_0070429
196 Ga0495670_0005061
197 Ga0495672_0009965
198 Ga0495685_000456
199 Ga0495681_0008332
200 Ga0495602_0191629
201 Ga0496100_0001894
202 Ga0496101_0001969
203 Ga0496102_0000020
204 Ga0496103_0000011
205 Ga0496104_0148079
206 Ga0496105_0022019
207 Ga0496111_0024607
208 Ga0496116_0000067
209 Ga0496117_0000170
210 Ga0496117_0001045
211 Ga0496118_0000076
212 Ga0496118_0001725
213 Ga0496119_0000237
214 Ga0496119_0001513
215 Ga0496120_0000838
216 Ga0496120_0005494
217 Ga0496121_0008868
218 Ga0496122_0092003
219 Ga0496123_0029844
220 Ga0496124_0000075
221 Ga0496124_0017311
222 Ga0496125_0043318
223 Ga0496126_0000080
224 nmdc:mga0sz30_10321_c1
225 Ga0495601_0001844
226 Ga0500560_014272
227 Ga0500569_000938
228 Ga0500628_004506
229 Ga0500652_003104
230 Ga0500559_0000104
231 Ga0500561_0001695
232 Ga0500573_0022875
233 Ga0500579_037826
234 Ga0500600_0007078
235 Ga0500616_0017709
236 Ga0500616_0026875
237 8054915777
238 2528203256
239 2528214391
240 2537900792
241 2546947900
242 2558907333
243 2579749759
244 2579857809
245 2619855633
246 2620353504
247 2626635051
248 2686538590
249 2686541615
250 2689990183
251 2753300470
252 2768647601
253 2774379237
254 2774391773
255 2774398754
256 2774864373
257 2809197427
258 2812352329
259 2852680419
260 2856744100
261 2857481858
262 2867352208
263 2870623196
264 2891564333
265 2891970017
266 2895887364
267 2904510749
268 2904779499
269 2905929311
270 2908679726
271 2919070387
272 2919541754
273 2928107630
274 2945920580
275 2946039110
276 2974296207
277 2974302898
278 2974327558
279 2977229938
280 2977238024
281 2977265197
282 2984544192
283 3003001296
284 637879744
285 8047710696
286 8047902679
287 8048136848
288 8048370477
289 8048388945
290 8053953469
291 8054926545
292 8055160772

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01565

FAD_binding_4

FAD binding domain

80

219

0.97

PF02913

FAD-oxidase_C

FAD linked oxidases, C-terminal domain

255

492

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
8jdp-assembly1.cif.gz_A crystal structure of h405a mldhd in complex with d-2-hydroxyisovaleric acid 0.9254 7 457
8jde-assembly1.cif.gz_A crystal structure of mldhd in complex with d-lactate 0.9242 6 457
8jds-assembly1.cif.gz_A crystal structure of mldhd in complex with pyruvate 0.9232 7 457
8jdt-assembly1.cif.gz_A crystal structure of mldhd in complex with 2-ketobutanoic acid 0.9206 7 457
8jdo-assembly1.cif.gz_A crystal structure of h405a mldhd in complex with d-2-hydroxyhexanoic acid 0.9189 7 457
ID Description Score Start End Superfamily
af_P0AEP9_110_230_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.973 98 219 3.30.465.10
af_P0AEP9_110_230_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9652 98 219 3.30.465.10
af_Q11061_15_234_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9585 20 219 3.30.465.10
af_K7K4A7_263_384_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9515 98 219 3.30.465.10
3pm9F02 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9485 98 219 3.30.465.10
ID Description Score Start End GO Terms
AF-A0A354XN31-F1-model_v4 FAD-binding oxidoreductase 0.9684 95 215 GO:0071949
AF-A0A3D1UBQ6-F1-model_v4 deleted 0.964 95 222
AF-A0A246F2T0-F1-model_v4 FAD-binding oxidoreductase 0.964 98 221 GO:0071949
AF-A0A4D4LNT1-F1-model_v4 FAD-binding PCMH-type domain-containing protein 0.9604 116 457 GO:0003824
GO:0071949
AF-A0A4D4LNT1-F1-model_v4 FAD-binding PCMH-type domain-containing protein 0.9576 116 457 GO:0003824
GO:0071949

Map