F200570

General Info

Members Datasets Scaffolds Average Seq Length
147 101 147 876

Family's Representative Sequence

Representative Sequence 3300025936|Ga0207670_10007507|Ga0207670_100075072
Length 906
Sequence MTEAERPDPDALLAQLKRAEAKSTRGKLKIFFGMSPGVGKTYAMLLAAREKQAEGCEVVVGVVETHGRKETEALLEGMPIIPRLQIEYRGTTLAEIDLDAILTWHPGLAVVDELAHTNAPGSRHPKRYQDVLELLDAGINVYTTLNVQHVGSRSDTVRQITGAPVSETVPDSVLDLADEIVLVDLTPDQLRTRLAEGKVYLGERAEWAAKNFFRESNLTALREMALRVVAEHVDRDLREIMSEQKIPGPWKSADRLLVAVSASPYSERLIRYTRRLASSMEASWIVANIEGPRPLSQEEQTRLTRYSALARQLGAEVITTPGRDVAEALLRVARENNVTQIVIGKPLGTRWLSFLKRDPLSWLMRHSGNIDIHMIPGEESAQPKRESLEERLARTPWQDFGIALGIAGGVTGFSLLIANFIDYRAIALFYLFAVVLAGMRLRRGPTFFLAALSALLWNFLFIPPRFTFYISKFEDFMMFGAYFVIAVVIGHLATQLHEREQAERRREERSTALYRLTRTLAGSGDLTQALPKVLQLIRDFFQADAAVWLRDENGLTQHPASSFVPSKKDESVAIWAFQKKQAAGKSTDTLPDSDCLHTPLVAGDRAEGVLSVRLKTLPTLEQRELLDAFAAQLALFLNKERALEENRAAQVARESQKLQKVLFDSVSHELKTPLAAMSTALQQSRPNSAELQQAARRLTHTVNNLLDATRLESGLLQPVREWCDPGELVHEAVAASGLKEGDVQINIAENLPAVSVDSGLIQQALNALLSNAMSYGKSDRPIEVSATRDDSTMVISVADRGAGLEPGEETKVFQKFYRGPRTRPGGIGLGLSIARQLVEANGGQIVAQNRSGGGAVFSIRLPVSEAMRLPAADSVATAATAVSPRETIEADASAVKVAAARVSSAK

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
28 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
32 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
33 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
34 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
35 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
36 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
54 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
55 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
56 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
57 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
58 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
59 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
60 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
61 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
62 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
63 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
64 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
65 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
66 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
67 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
68 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
69 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
70 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
71 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
72 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
73 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
74 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
75 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
76 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
77 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
78 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
79 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
80 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
81 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
82 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
83 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
84 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
85 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
86 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
87 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
88 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
89 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
90 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
91 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
92 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
98 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
99 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
101 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 4.08
Rhizosphere 89.8
Stem 0
Stem Tuber 0
Unclassified 6.12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10009782 3300003320 Bacteria 15407
2 rootL2_10083294 3300003322 Bacteria 4194
3 rootH1_10133206 3300003323 Bacteria 4086
4 JGI25405J52794_10001349 3300003911 Bacteria 4021
5 Ga0070670_100026711 3300005331 Bacteria 4966
6 Ga0070689_100066740 3300005340 Bacteria 2803
7 Ga0070669_100025073 3300005353 Bacteria 4281
8 Ga0070671_100034838 3300005355 Bacteria 4169
9 Ga0070713_100021737 3300005436 Bacteria 4943
10 Ga0070711_100021238 3300005439 Bacteria 4194
11 Ga0070711_100031439 3300005439 Bacteria 3524
12 Ga0070708_100012498 3300005445 Bacteria 6930
13 Ga0070678_100002602 3300005456 Bacteria 9918
14 Ga0070706_100000011 3300005467 Bacteria 198585
15 Ga0070706_100008896 3300005467 Bacteria 9350
16 Ga0070706_100030632 3300005467 Bacteria 4959
17 Ga0070707_100009816 3300005468 Bacteria 8904
18 Ga0070707_100023118 3300005468 Bacteria 5881
19 Ga0070698_100002638 3300005471 Bacteria 19754
20 Ga0070697_100001987 3300005536 Bacteria 15658
21 Ga0070697_100008626 3300005536 Bacteria 7959
22 Ga0068853_100000038 3300005539 Bacteria 107719
23 Ga0070672_100009032 3300005543 Bacteria 6852
24 Ga0070665_100000055 3300005548 Bacteria 242706
25 Ga0070665_100050457 3300005548 Bacteria 4175
26 Ga0068856_100028632 3300005614 Bacteria 5442
27 Ga0068858_100017913 3300005842 Bacteria 6633
28 Ga0068858_100051271 3300005842 Bacteria 3818
29 Ga0081455_10000398 3300005937 Bacteria 57265
30 Ga0081455_10001384 3300005937 Bacteria 29929
31 Ga0081540_1000010 3300005983 Bacteria 193206
32 Ga0081539_10001295 3300005985 Bacteria 43898
33 Ga0070717_10000008 3300006028 Bacteria 299056
34 Ga0070712_100039749 3300006175 Bacteria 3220
35 Ga0075434_100046293 3300006871 Bacteria 4316
36 Ga0068865_100012207 3300006881 Bacteria 5404
37 Ga0105240_10003522 3300009093 Bacteria 24292
38 Ga0114129_10044052 3300009147 Bacteria 6278
39 Ga0157374_10000030 3300013296 Bacteria 211102
40 Ga0157374_10026855 3300013296 Bacteria 5184
41 Ga0157378_10002107 3300013297 Bacteria 17725
42 Ga0157375_10005053 3300013308 Bacteria 11449
43 Ga0157376_10006989 3300014969 Bacteria 8007
44 Ga0213876_10002524 3300021384 Bacteria 10715
45 Ga0207697_10000135 3300025315 Bacteria 35637
46 Ga0207697_10001649 3300025315 Bacteria 12068
47 Ga0207645_10005400 3300025907 Bacteria 9270
48 Ga0207645_10009214 3300025907 Bacteria 6839
49 Ga0207684_10000052 3300025910 Bacteria 228510
50 Ga0207684_10017104 3300025910 Bacteria 6225
51 Ga0207693_10034925 3300025915 Bacteria 3965
52 Ga0207693_10053921 3300025915 Bacteria 3155
53 Ga0207646_10013197 3300025922 Bacteria 7906
54 Ga0207681_10030125 3300025923 Bacteria 3534
55 Ga0207681_10039431 3300025923 Bacteria 3136
56 Ga0207700_10038924 3300025928 Bacteria 3456
57 Ga0207706_10000611 3300025933 Bacteria 37952
58 Ga0207670_10007507 3300025936 Bacteria 6088
59 Ga0207665_10013718 3300025939 Bacteria 5329
60 Ga0207691_10005300 3300025940 Bacteria 12443
61 Ga0207658_10018477 3300025986 Bacteria 4814
62 Ga0207703_10019956 3300026035 Bacteria 5237
63 Ga0207639_10000061 3300026041 Bacteria 107734
64 Ga0207702_10000313 3300026078 Bacteria 55459
65 Ga0207683_10022250 3300026121 Bacteria 5439
66 Ga0207683_10032556 3300026121 Bacteria 4529
67 Ga0268266_10000027 3300028379 Bacteria 426852
68 Ga0268266_10014485 3300028379 Bacteria 6777
69 Ga0265319_1009456 3300028563 Bacteria 4148
70 Ga0265319_1010973 3300028563 Bacteria 3747
71 Ga0265334_10005328 3300028573 Bacteria 5619
72 Ga0265318_10000124 3300028577 Bacteria 71647
73 Ga0265323_10000012 3300028653 Bacteria 108344
74 Ga0265323_10012007 3300028653 Bacteria 3480
75 Ga0265322_10005649 3300028654 Bacteria 3700
76 Ga0307515_10055080 3300028794 Bacteria 5821
77 Ga0265338_10000008 3300028800 Bacteria 481542
78 Ga0265338_10000402 3300028800 Bacteria 77555
79 Ga0265338_10001171 3300028800 Bacteria 43298
80 Ga0265338_10001731 3300028800 Bacteria 34533
81 Ga0265338_10005300 3300028800 Bacteria 16881
82 Ga0265338_10010308 3300028800 Bacteria 10981
83 Ga0265324_10000422 3300029957 Bacteria 30430
84 Ga0265324_10012721 3300029957 Bacteria 3164
85 Ga0307511_10003767 3300030521 Bacteria 15519
86 Ga0265320_10000030 3300031240 Bacteria 155388
87 Ga0265320_10000290 3300031240 Bacteria 40860
88 Ga0265320_10000376 3300031240 Bacteria 36363
89 Ga0265320_10003072 3300031240 Bacteria 11332
90 Ga0265320_10007102 3300031240 Bacteria 6981
91 Ga0265320_10008034 3300031240 Bacteria 6496
92 Ga0265320_10010773 3300031240 Bacteria 5420
93 Ga0265320_10021708 3300031240 Bacteria 3448
94 Ga0265331_10004543 3300031250 Bacteria 8648
95 Ga0265327_10000127 3300031251 Bacteria 166247
96 Ga0265327_10000917 3300031251 Bacteria 43226
97 Ga0265327_10003676 3300031251 Bacteria 14368
98 Ga0265327_10019762 3300031251 Bacteria 4128
99 Ga0265327_10029588 3300031251 Bacteria 3113
100 Ga0265316_10000803 3300031344 Bacteria 34665
101 Ga0265316_10013899 3300031344 Bacteria 7121
102 Ga0265313_10000230 3300031595 Bacteria 60452
103 Ga0265313_10001567 3300031595 Bacteria 21213
104 Ga0307508_10000309 3300031616 Bacteria 59143
105 Ga0265314_10002765 3300031711 Bacteria 17523
106 Ga0265342_10002189 3300031712 Bacteria 17195
107 Ga0265342_10018350 3300031712 Bacteria 4534
108 Ga0373935_0023002 3300035692 Bacteria 3827
109 Ga0373947_0025748 3300035725 Bacteria 3431
110 Ga0373937_0001996 3300036401 Bacteria 17063
111 Ga0373937_0010029 3300036401 Bacteria 8259
112 Ga0373925_0055776 3300037068 Bacteria 2959
113 Ga0436365_1040680 3300039437 Bacteria 45290
114 Ga0436365_1148519 3300039437 Bacteria 5762
115 Ga0453684_0000287 3300044712 Bacteria 216926
116 Ga0466967_0055879 3300045976 Bacteria 3478
117 Ga0495592_0012465 3300046454 Bacteria 6458
118 Ga0495592_0027379 3300046454 Bacteria 4322
119 Ga0495651_0001549 3300046462 Bacteria 17764
120 Ga0495628_0006431 3300046516 Bacteria 10264
121 Ga0495643_0000062 3300046522 Bacteria 183602
122 Ga0495652_0012914 3300046529 Bacteria 7527
123 Ga0495652_0020318 3300046529 Bacteria 5904
124 Ga0495587_0004241 3300046536 Bacteria 9480
125 Ga0495587_0017261 3300046536 Bacteria 4487
126 Ga0495645_0009851 3300046543 Bacteria 6686
127 Ga0495599_0004904 3300046678 Bacteria 7952
128 Ga0495646_0013866 3300046680 Bacteria 5123
129 Ga0495674_0050862 3300047319 Bacteria 3655
130 Ga0496102_0025444 3300048905 Bacteria 5269
131 Ga0496104_0026197 3300048907 Bacteria 5380
132 Ga0496105_0046931 3300048908 Bacteria 3565
133 Ga0496114_0002161 3300048917 Bacteria 14963
134 Ga0496115_0001201 3300048918 Bacteria 18575
135 Ga0496115_0009321 3300048918 Bacteria 7294
136 Ga0501032_0006156 3300049569 Bacteria 8830
137 Ga0501033_0011393 3300049570 Bacteria 6806
138 Ga0501037_0003669 3300049573 Bacteria 11144
139 Ga0501046_0015374 3300049580 Bacteria 6435
140 Ga0501046_0042363 3300049580 Bacteria 3630
141 Ga0501047_0007962 3300049581 Bacteria 9993
142 Ga0501080_0022334 3300049742 Bacteria 5861
143 Ga0501083_0001889 3300049744 Bacteria 14376
144 Ga0501035_0000480 3300049822 Bacteria 44821
145 Ga0501044_0000188 3300049823 Bacteria 77610
146 Ga0501044_0041401 3300049823 Bacteria 4795
147 nmdc:mga0n895_52594_c1 3300050512 Bacteria 3998

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048908 Ga0496105_0046931 Ga0496105_0046931_1089_3527 794
2 3300005445 Ga0070708_100012498 Ga0070708_1000124984 821
3 3300005467 Ga0070706_100030632 Ga0070706_1000306323 821
4 3300005468 Ga0070707_100023118 Ga0070707_1000231183 821
5 3300005536 Ga0070697_100008626 Ga0070697_1000086262 821
6 3300025910 Ga0207684_10017104 Ga0207684_100171042 821
7 3300025922 Ga0207646_10013197 Ga0207646_100131975 821
8 3300005614 Ga0068856_100028632 Ga0068856_1000286322 824
9 3300005539 Ga0068853_100000038 Ga0068853_10000003861 835
10 3300026041 Ga0207639_10000061 Ga0207639_1000006124 835
11 3300046522 Ga0495643_0000062 Ga0495643_0000062_91533_94145 835
12 3300048918 Ga0496115_0001201 Ga0496115_0001201_2187_4796 836
13 3300005436 Ga0070713_100021737 Ga0070713_1000217373 839
14 3300005842 Ga0068858_100017913 Ga0068858_1000179134 840
15 3300026035 Ga0207703_10019956 Ga0207703_100199563 840
16 3300028653 Ga0265323_10000012 Ga0265323_1000001243 842
17 3300028654 Ga0265322_10005649 Ga0265322_100056491 842
18 3300031344 Ga0265316_10000803 Ga0265316_1000080324 842
19 3300031712 Ga0265342_10002189 Ga0265342_100021894 842
20 3300035692 Ga0373935_0023002 Ga0373935_0023002_479_3139 843
21 3300005548 Ga0070665_100000055 Ga0070665_10000005565 848
22 3300009093 Ga0105240_10003522 Ga0105240_1000352212 848
23 3300026121 Ga0207683_10022250 Ga0207683_100222503 848
24 3300028379 Ga0268266_10000027 Ga0268266_10000027234 848
25 3300006175 Ga0070712_100039749 Ga0070712_1000397492 851
26 3300025939 Ga0207665_10013718 Ga0207665_100137183 851
27 3300031240 Ga0265320_10010773 Ga0265320_100107732 851
28 3300005331 Ga0070670_100026711 Ga0070670_1000267112 853
29 3300005340 Ga0070689_100066740 Ga0070689_1000667401 853
30 3300005543 Ga0070672_100009032 Ga0070672_1000090323 853
31 3300005548 Ga0070665_100050457 Ga0070665_1000504572 853
32 3300005985 Ga0081539_10001295 Ga0081539_1000129522 853
33 3300006881 Ga0068865_100012207 Ga0068865_1000122071 853
34 3300013296 Ga0157374_10026855 Ga0157374_100268553 853
35 3300013297 Ga0157378_10002107 Ga0157378_100021073 853
36 3300013308 Ga0157375_10005053 Ga0157375_100050531 853
37 3300025315 Ga0207697_10000135 Ga0207697_1000013515 853
38 3300025923 Ga0207681_10039431 Ga0207681_100394312 853
39 3300025940 Ga0207691_10005300 Ga0207691_100053002 853
40 3300005842 Ga0068858_100051271 Ga0068858_1000512712 854
41 3300025907 Ga0207645_10009214 Ga0207645_100092143 854
42 3300026121 Ga0207683_10032556 Ga0207683_100325561 854
43 3300028379 Ga0268266_10014485 Ga0268266_100144853 854
44 3300028800 Ga0265338_10001731 Ga0265338_1000173125 854
45 3300031240 Ga0265320_10000376 Ga0265320_100003769 854
46 3300048905 Ga0496102_0025444 Ga0496102_0025444_1885_4605 854
47 3300048907 Ga0496104_0026197 Ga0496104_0026197_918_3638 854
48 3300048917 Ga0496114_0002161 Ga0496114_0002161_3386_6106 854
49 3300048918 Ga0496115_0009321 Ga0496115_0009321_303_3023 854
50 3300028563 Ga0265319_1009456 Ga0265319_10094564 855
51 3300028653 Ga0265323_10012007 Ga0265323_100120071 855
52 3300031240 Ga0265320_10003072 Ga0265320_100030724 855
53 3300021384 Ga0213876_10002524 Ga0213876_100025244 856
54 3300025907 Ga0207645_10005400 Ga0207645_100054007 856
55 3300035725 Ga0373947_0025748 Ga0373947_0025748_11_2635 856
56 3300039437 Ga0436365_1040680 Ga0436365_1040680_24071_26728 856
57 3300049570 Ga0501033_0011393 Ga0501033_0011393_692_3361 856
58 3300049580 Ga0501046_0015374 Ga0501046_0015374_113_2782 856
59 3300049823 Ga0501044_0041401 Ga0501044_0041401_1631_4300 856
60 3300003323 rootH1_10133206 rootH1_101332062 857
61 3300031344 Ga0265316_10013899 Ga0265316_100138993 857
62 3300036401 Ga0373937_0001996 Ga0373937_0001996_6512_9136 857
63 3300045976 Ga0466967_0055879 Ga0466967_0055879_357_3023 857
64 3300046454 Ga0495592_0012465 Ga0495592_0012465_820_3444 857
65 3300046462 Ga0495651_0001549 Ga0495651_0001549_8141_10765 857
66 3300046529 Ga0495652_0012914 Ga0495652_0012914_1022_3646 857
67 3300049742 Ga0501080_0022334 Ga0501080_0022334_2768_5425 857
68 3300003911 JGI25405J52794_10001349 JGI25405J52794_100013492 858
69 3300005353 Ga0070669_100025073 Ga0070669_1000250733 858
70 3300005355 Ga0070671_100034838 Ga0070671_1000348381 858
71 3300005439 Ga0070711_100021238 Ga0070711_1000212381 858
72 3300005439 Ga0070711_100031439 Ga0070711_1000314392 858
73 3300005456 Ga0070678_100002602 Ga0070678_1000026024 858
74 3300005467 Ga0070706_100000011 Ga0070706_100000011158 858
75 3300005467 Ga0070706_100008896 Ga0070706_1000088965 858
76 3300005468 Ga0070707_100009816 Ga0070707_1000098163 858
77 3300005471 Ga0070698_100002638 Ga0070698_1000026381 858
78 3300005536 Ga0070697_100001987 Ga0070697_1000019874 858
79 3300005937 Ga0081455_10000398 Ga0081455_1000039817 858
80 3300005937 Ga0081455_10001384 Ga0081455_1000138427 858
81 3300005983 Ga0081540_1000010 Ga0081540_1000010105 858
82 3300006871 Ga0075434_100046293 Ga0075434_1000462932 858
83 3300009147 Ga0114129_10044052 Ga0114129_100440525 858
84 3300025315 Ga0207697_10001649 Ga0207697_100016492 858
85 3300025910 Ga0207684_10000052 Ga0207684_10000052173 858
86 3300025915 Ga0207693_10034925 Ga0207693_100349252 858
87 3300025915 Ga0207693_10053921 Ga0207693_100539211 858
88 3300025923 Ga0207681_10030125 Ga0207681_100301252 858
89 3300025928 Ga0207700_10038924 Ga0207700_100389242 858
90 3300025933 Ga0207706_10000611 Ga0207706_1000061135 858
91 3300025936 Ga0207670_10007507 Ga0207670_100075072 858
92 3300025986 Ga0207658_10018477 Ga0207658_100184771 858
93 3300031251 Ga0265327_10003676 Ga0265327_100036763 858
94 3300036401 Ga0373937_0010029 Ga0373937_0010029_3097_5808 858
95 3300037068 Ga0373925_0055776 Ga0373925_0055776_50_2761 858
96 3300046516 Ga0495628_0006431 Ga0495628_0006431_2788_5499 858
97 3300046529 Ga0495652_0020318 Ga0495652_0020318_1222_3933 858
98 3300046536 Ga0495587_0004241 Ga0495587_0004241_4299_7010 858
99 3300046543 Ga0495645_0009851 Ga0495645_0009851_870_3581 858
100 3300046678 Ga0495599_0004904 Ga0495599_0004904_1200_3911 858
101 3300046680 Ga0495646_0013866 Ga0495646_0013866_399_3110 858
102 3300049573 Ga0501037_0003669 Ga0501037_0003669_6145_8814 858
103 3300050512 nmdc:mga0n895_52594_c1 nmdc:mga0n895_52594_c1_1039_3666 858
104 3300044712 Ga0453684_0000287 Ga0453684_0000287_110732_113401 860
105 3300049744 Ga0501083_0001889 Ga0501083_0001889_8980_11646 861
106 3300029957 Ga0265324_10012721 Ga0265324_100127211 863
107 3300031251 Ga0265327_10019762 Ga0265327_100197624 863
108 3300013296 Ga0157374_10000030 Ga0157374_10000030114 864
109 3300014969 Ga0157376_10006989 Ga0157376_100069895 864
110 3300003322 rootL2_10083294 rootL2_100832943 865
111 3300026078 Ga0207702_10000313 Ga0207702_1000031318 866
112 3300039437 Ga0436365_1148519 Ga0436365_1148519_2388_5051 866
113 3300028800 Ga0265338_10005300 Ga0265338_1000530013 867
114 3300031251 Ga0265327_10029588 Ga0265327_100295882 867
115 3300031240 Ga0265320_10007102 Ga0265320_100071024 869
116 3300046454 Ga0495592_0027379 Ga0495592_0027379_1487_4156 869
117 3300046536 Ga0495587_0017261 Ga0495587_0017261_1007_3676 869
118 3300047319 Ga0495674_0050862 Ga0495674_0050862_183_2852 869
119 3300028800 Ga0265338_10000008 Ga0265338_10000008313 870
120 3300028800 Ga0265338_10001171 Ga0265338_1000117122 870
121 3300029957 Ga0265324_10000422 Ga0265324_1000042210 870
122 3300030521 Ga0307511_10003767 Ga0307511_100037675 870
123 3300028800 Ga0265338_10010308 Ga0265338_100103088 871
124 3300031240 Ga0265320_10000290 Ga0265320_100002908 871
125 3300031240 Ga0265320_10021708 Ga0265320_100217081 871
126 3300031595 Ga0265313_10000230 Ga0265313_1000023018 871
127 3300031712 Ga0265342_10018350 Ga0265342_100183503 871
128 3300028573 Ga0265334_10005328 Ga0265334_100053285 872
129 3300028577 Ga0265318_10000124 Ga0265318_1000012426 872
130 3300028794 Ga0307515_10055080 Ga0307515_100550803 872
131 3300028800 Ga0265338_10000402 Ga0265338_1000040257 872
132 3300031240 Ga0265320_10008034 Ga0265320_100080344 872
133 3300031595 Ga0265313_10001567 Ga0265313_1000156717 872
134 3300031616 Ga0307508_10000309 Ga0307508_1000030916 872
135 3300031711 Ga0265314_10002765 Ga0265314_100027655 872
136 3300049569 Ga0501032_0006156 Ga0501032_0006156_658_3315 872
137 3300049580 Ga0501046_0042363 Ga0501046_0042363_675_3332 872
138 3300049581 Ga0501047_0007962 Ga0501047_0007962_1494_4151 872
139 3300049822 Ga0501035_0000480 Ga0501035_0000480_5828_8485 872
140 3300049823 Ga0501044_0000188 Ga0501044_0000188_5856_8513 872
141 3300028563 Ga0265319_1010973 Ga0265319_10109732 873
142 3300031250 Ga0265331_10004543 Ga0265331_100045433 873
143 3300031251 Ga0265327_10000917 Ga0265327_100009173 873
144 3300006028 Ga0070717_10000008 Ga0070717_10000008154 874
145 3300031240 Ga0265320_10000030 Ga0265320_10000030109 874
146 3300031251 Ga0265327_10000127 Ga0265327_1000012788 874
147 3300003320 rootH2_10009782 rootH2_1000978210 875

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02702

KdpD

Osmosensitive K+ channel His kinase sensor domain

24

233

0.99

PF13493

DUF4118

Domain of unknown function (DUF4118)

400

506

0.97

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

756

865

0.93

PF00512

HisKA

His Kinase A (phospho-acceptor) domain

658

714

0.89

PF01590

GAF

GAF domain

525

637

0.86

PF13492

GAF_3

GAF domain

525

639

0.83

Feature Viewer

pLDDT pTM Quality
79.47 0.45 Low
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Predicted Structure (AlphaFold2)

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