F205281

General Info

Members Datasets Scaffolds Average Seq Length
149 121 146 259

Family's Representative Sequence

Representative Sequence 3300005436|Ga0070713_100122708|Ga0070713_1001227082
Length 295
Sequence MTSRLETGRHSRPSPESPMTLSIWQVDAFATRVFHGNPAAIVPLQSWLPDHTMQAIAQENNLAETAFFVRRGNSDYELRWFTPSMEVPMCGHATLASGWVIFSELAPEIEVIRFSAKCGTLTVERSIDDCHRMGLPAGKSVSFDAPPGFGAALAESVSAPPPEELHVAATGAGGTRGIIAVWSESAVRDLQPSGSLATLLASVNAGGLLATSRCESRDYDFVSRFFAPGMGVPEDPVTGSMHASLAPFWAARLGKAELHAFQASARGGELRCTVDQARVVLSGPCALYLRGEINL

Samples

Sample ID Description Type Environment
1 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
2 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
3 2852653556 Sphingopyxis sp. JAI108 Isolate Rhizosphere
4 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
5 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
6 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
35 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
36 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
37 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
52 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
54 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
55 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
56 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
57 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
58 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
59 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
60 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
61 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
62 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
63 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
64 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
65 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
66 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
67 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
68 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
69 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
70 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
71 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
72 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
73 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
74 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
75 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
76 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
77 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
78 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
79 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
80 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
81 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
82 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
83 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
84 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
85 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
86 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
87 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
88 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
89 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
90 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
91 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
92 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
104 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
105 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
106 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
107 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
108 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
110 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
111 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
112 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
113 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
114 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
115 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
116 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
117 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
118 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
119 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
120 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
121 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.99
Metatranscriptomes 0
Isolates 2.01

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.45
Nodule 0
Rhizoplane 0.67
Rhizosphere 79.19
Stem 0
Stem Tuber 0
Unclassified 2.68

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055536_1001336 3300003781 Bacteria 15029
2 Ga0055536_1008208 3300003781 Bacteria 4530
3 Ga0055536_1021209 3300003781 Bacteria 1979
4 Ga0055530_10000388 3300003791 Bacteria 39490
5 Ga0055531_10007322 3300003794 Bacteria 6049
6 Ga0055531_10018246 3300003794 Bacteria 2908
7 Ga0070658_10223507 3300005327 Bacteria 1593
8 Ga0068868_100003013 3300005338 Bacteria 11717
9 Ga0070660_100000258 3300005339 Bacteria 34973
10 Ga0070669_100230529 3300005353 Bacteria 1468
11 Ga0070659_100000022 3300005366 Bacteria 154091
12 Ga0070703_10037726 3300005406 Bacteria 1490
13 Ga0070713_100122708 3300005436 Bacteria 2281
14 Ga0070694_100052464 3300005444 Bacteria 2756
15 Ga0070681_10249545 3300005458 Unclassified 1688
16 Ga0070698_100056079 3300005471 Bacteria 3993
17 Ga0070697_100188351 3300005536 Bacteria 1751
18 Ga0070696_100191273 3300005546 Bacteria 1523
19 Ga0070665_100001610 3300005548 Bacteria 25968
20 Ga0070704_100007309 3300005549 Bacteria 6572
21 Ga0068855_100928037 3300005563 Bacteria 918
22 Ga0081539_10053661 3300005985 Bacteria 2255
23 Ga0070716_100006087 3300006173 Bacteria 5882
24 Ga0075428_100024957 3300006844 Bacteria 6614
25 Ga0075428_100770921 3300006844 Bacteria 1023
26 Ga0075431_100051565 3300006847 Bacteria 4242
27 Ga0075431_100653557 3300006847 Bacteria 1032
28 Ga0075434_100903364 3300006871 Bacteria 898
29 Ga0075429_100018503 3300006880 Bacteria 6033
30 Ga0099795_10098984 3300007788 Bacteria 1141
31 Ga0111539_10216698 3300009094 Bacteria 2230
32 Ga0111539_10269108 3300009094 Unclassified 1984
33 Ga0114129_10663017 3300009147 Bacteria 1345
34 Ga0105248_10019306 3300009177 Bacteria 7542
35 Ga0105248_10034473 3300009177 Bacteria 5660
36 Ga0105237_10012732 3300009545 Bacteria 8848
37 Ga0105238_10030827 3300009551 Bacteria 5457
38 Ga0105249_10135680 3300009553 Bacteria 2354
39 Ga0105249_10172573 3300009553 Bacteria 2098
40 Ga0157380_10104204 3300014326 Bacteria 2369
41 Ga0209675_1000137 3300025291 Bacteria 98902
42 Ga0209676_1000138 3300025292 Bacteria 178932
43 Ga0209676_1000344 3300025292 Bacteria 88146
44 Ga0209676_1000593 3300025292 Bacteria 54046
45 Ga0209050_1000115 3300025298 Bacteria 204622
46 Ga0209050_1019500 3300025298 Bacteria 2571
47 Ga0209050_1031055 3300025298 Bacteria 1672
48 Ga0209257_1000160 3300025304 Bacteria 177175
49 Ga0209257_1000445 3300025304 Bacteria 77902
50 Ga0209257_1003412 3300025304 Bacteria 13669
51 Ga0207653_10031371 3300025885 Bacteria 1716
52 Ga0207657_10003941 3300025919 Bacteria 15762
53 Ga0207652_10163457 3300025921 Bacteria 1996
54 Ga0207681_10038766 3300025923 Bacteria 3160
55 Ga0207694_10007800 3300025924 Bacteria 8107
56 Ga0207700_10477373 3300025928 Bacteria 1101
57 Ga0207690_10000003 3300025932 Bacteria 783011
58 Ga0207711_10002689 3300025941 Bacteria 15719
59 Ga0207711_10019451 3300025941 Bacteria 5652
60 Ga0207667_10736520 3300025949 Bacteria 986
61 Ga0207677_10001724 3300026023 Bacteria 11583
62 Ga0207708_10146720 3300026075 Bacteria 1854
63 Ga0207428_10118346 3300027907 Bacteria 2033
64 Ga0207428_10322443 3300027907 Bacteria 1141
65 Ga0268266_10000332 3300028379 Bacteria 74181
66 Ga0268266_10120382 3300028379 Bacteria 2335
67 Ga0265327_10001112 3300031251 Bacteria 37196
68 Ga0307408_100150912 3300031548 Bacteria 1834
69 Ga0316576_10083024 3300031727 Bacteria 2380
70 Ga0307407_10029204 3300031903 Unclassified 2959
71 Ga0307412_10045003 3300031911 Bacteria 2882
72 Ga0307412_10105456 3300031911 Bacteria 2002
73 Ga0307409_100309507 3300031995 Bacteria 1473
74 Ga0307416_100360029 3300032002 Bacteria 1476
75 Ga0307414_10005292 3300032004 Bacteria 7091
76 Ga0307414_10024592 3300032004 Bacteria 3844
77 Ga0316585_10102740 3300032137 Bacteria 938
78 Ga0307510_10335487 3300033180 Bacteria 965
79 Ga0373957_0121695 3300035120 Bacteria 1057
80 Ga0373933_0241478 3300035724 Unclassified 1162
81 Ga0373937_0018969 3300036401 Bacteria 6152
82 Ga0316582_0032527 3300036647 Bacteria 3197
83 Ga0316584_0012170 3300036712 Bacteria 6063
84 Ga0373925_0074114 3300037068 Bacteria 2578
85 Ga0395899_0398263 3300037312 Bacteria 911
86 Ga0395900_0155851 3300037418 Bacteria 2332
87 Ga0395898_0127764 3300037466 Bacteria 2435
88 Ga0395905_0163105 3300037471 Bacteria 2094
89 Ga0395905_0259089 3300037471 Bacteria 1624
90 Ga0436365_1322259 3300039437 Bacteria 7174
91 Ga0436360_0603394 3300039438 Unclassified 959
92 Ga0451577_0128085 3300042876 Bacteria 2276
93 Ga0495580_0276869 3300046472 Bacteria 1145
94 Ga0495643_0079042 3300046522 Bacteria 1715
95 Ga0495598_0002805 3300046537 Bacteria 3626
96 Ga0495598_0003641 3300046537 Bacteria 3287
97 Ga0495621_0005168 3300046539 Bacteria 3733
98 Ga0495621_0037864 3300046539 Bacteria 1679
99 Ga0495597_0115725 3300046542 Bacteria 1121
100 Ga0495667_0079494 3300046559 Unclassified 2132
101 Ga0495668_0014923 3300046616 Bacteria 4545
102 Ga0495625_0001296 3300046660 Bacteria 31375
103 Ga0495659_0016043 3300046664 Bacteria 2467
104 Ga0495670_0007075 3300046691 Bacteria 5524
105 Ga0495636_0190866 3300047318 Bacteria 933
106 Ga0495677_0095263 3300047445 Bacteria 1124
107 Ga0495681_0101636 3300047470 Bacteria 1256
108 Ga0495686_0063890 3300047472 Bacteria 2280
109 Ga0496125_0098065 3300048928 Bacteria 2169
110 Ga0501292_013945 3300049515 Bacteria 1241
111 Ga0501033_0079536 3300049570 Bacteria 2405
112 Ga0501034_0430990 3300049571 Bacteria 1238
113 Ga0501036_0017650 3300049572 Bacteria 5971
114 Ga0501037_0017116 3300049573 Bacteria 5334
115 Ga0501037_0075336 3300049573 Bacteria 2451
116 Ga0501038_0045901 3300049574 Bacteria 3790
117 Ga0501040_0035259 3300049576 Unclassified 3392
118 Ga0501040_0201871 3300049576 Bacteria 1412
119 Ga0501041_0033450 3300049577 Bacteria 3110
120 Ga0501042_0019724 3300049578 Bacteria 4687
121 Ga0501043_0112660 3300049579 Bacteria 2136
122 Ga0501046_0011551 3300049580 Bacteria 7550
123 Ga0501046_0246198 3300049580 Bacteria 1317
124 Ga0501048_0136296 3300049582 Bacteria 1735
125 Ga0501069_0001412 3300049585 Bacteria 11767
126 Ga0501075_0039770 3300049591 Bacteria 3519
127 Ga0501076_0082757 3300049592 Bacteria 2577
128 Ga0501235_016839 3300049669 Unclassified 1616
129 Ga0501079_0068195 3300049741 Bacteria 2745
130 Ga0501044_0367963 3300049823 Bacteria 1354
131 Ga0501044_0762163 3300049823 Bacteria 849
132 Ga0501045_0037419 3300049824 Bacteria 3526
133 nmdc:mga09592_243981_c1 3300050508 Bacteria 1557
134 nmdc:mga08y16_2618_c1 3300050511 Bacteria 18485
135 nmdc:mga08y16_479378_c1 3300050511 Bacteria 1266
136 Ga0500643_003158 3300053087 Bacteria 8060
137 Ga0500597_012883 3300053120 Bacteria 3085
138 Ga0500658_0000651 3300053134 Bacteria 14307
139 Ga0500568_0008091 3300053139 Bacteria 5102
140 Ga0500604_0028683 3300053151 Bacteria 1618
141 Ga0500604_0050913 3300053151 Bacteria 1278
142 Ga0500624_000085 3300053157 Bacteria 47798
143 Ga0500627_0000097 3300053158 Bacteria 29445
144 Ga0500637_0000023 3300053178 Bacteria 61044
145 Ga0500645_016645 3300053730 Bacteria 2312
146 Ga0530510_0031257 3300061734 Unclassified 3827

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300046537 Ga0495598_0002805 Ga0495598_0002805_2958_3614 180
2 3300035120 Ga0373957_0121695 Ga0373957_0121695_302_1033 206
3 3300035724 Ga0373933_0241478 Ga0373933_0241478_20_751 206
4 3300046559 Ga0495667_0079494 Ga0495667_0079494_1389_2120 206
5 3300049576 Ga0501040_0201871 Ga0501040_0201871_608_1345 208
6 3300049582 Ga0501048_0136296 Ga0501048_0136296_23_760 208
7 3300031995 Ga0307409_100309507 Ga0307409_1003095072 215
8 3300032002 Ga0307416_100360029 Ga0307416_1003600292 215
9 3300049515 Ga0501292_013945 Ga0501292_013945_177_908 217
10 3300005353 Ga0070669_100230529 Ga0070669_1002305293 222
11 3300009553 Ga0105249_10172573 Ga0105249_101725733 222
12 3300014326 Ga0157380_10104204 Ga0157380_101042042 222
13 3300025923 Ga0207681_10038766 Ga0207681_100387662 222
14 3300027907 Ga0207428_10118346 Ga0207428_101183463 222
15 3300046537 Ga0495598_0003641 Ga0495598_0003641_793_1581 222
16 3300046539 Ga0495621_0005168 Ga0495621_0005168_2816_3604 222
17 3300046664 Ga0495659_0016043 Ga0495659_0016043_1476_2264 222
18 3300046691 Ga0495670_0007075 Ga0495670_0007075_3211_3999 222
19 3300047318 Ga0495636_0190866 Ga0495636_0190866_20_808 222
20 3300047445 Ga0495677_0095263 Ga0495677_0095263_184_972 222
21 3300046539 Ga0495621_0037864 Ga0495621_0037864_376_1164 224
22 3300028379 Ga0268266_10120382 Ga0268266_101203822 231
23 3300049669 Ga0501235_016839 Ga0501235_016839_305_1084 233
24 3300005536 Ga0070697_100188351 Ga0070697_1001883513 236
25 3300005546 Ga0070696_100191273 Ga0070696_1001912732 236
26 3300006173 Ga0070716_100006087 Ga0070716_1000060875 236
27 3300006844 Ga0075428_100024957 Ga0075428_1000249577 236
28 3300006847 Ga0075431_100653557 Ga0075431_1006535572 236
29 3300006880 Ga0075429_100018503 Ga0075429_1000185036 236
30 3300007788 Ga0099795_10098984 Ga0099795_100989841 236
31 3300009094 Ga0111539_10216698 Ga0111539_102166982 236
32 3300009147 Ga0114129_10663017 Ga0114129_106630171 236
33 3300027907 Ga0207428_10322443 Ga0207428_103224432 236
34 3300033180 Ga0307510_10335487 Ga0307510_103354871 236
35 3300042876 Ga0451577_0128085 Ga0451577_0128085_655_1449 236
36 3300050508 nmdc:mga09592_243981_c1 nmdc:mga09592_243981_c1_440_1219 236
37 3300050511 nmdc:mga08y16_2618_c1 nmdc:mga08y16_2618_c1_53_832 236
38 3300005406 Ga0070703_10037726 Ga0070703_100377261 237
39 3300005444 Ga0070694_100052464 Ga0070694_1000524644 237
40 3300005471 Ga0070698_100056079 Ga0070698_1000560793 237
41 3300005549 Ga0070704_100007309 Ga0070704_1000073097 237
42 3300025885 Ga0207653_10031371 Ga0207653_100313712 237
43 3300005327 Ga0070658_10223507 Ga0070658_102235072 238
44 3300005458 Ga0070681_10249545 Ga0070681_102495452 238
45 3300005548 Ga0070665_100001610 Ga0070665_10000161017 238
46 3300005985 Ga0081539_10053661 Ga0081539_100536612 238
47 3300006871 Ga0075434_100903364 Ga0075434_1009033641 238
48 3300025921 Ga0207652_10163457 Ga0207652_101634571 238
49 3300028379 Ga0268266_10000332 Ga0268266_1000033257 238
50 3300031251 Ga0265327_10001112 Ga0265327_1000111219 238
51 3300037312 Ga0395899_0398263 Ga0395899_0398263_71_856 238
52 3300037418 Ga0395900_0155851 Ga0395900_0155851_1338_2123 238
53 3300037466 Ga0395898_0127764 Ga0395898_0127764_1266_2051 238
54 3300037471 Ga0395905_0163105 Ga0395905_0163105_797_1582 238
55 3300037471 Ga0395905_0259089 Ga0395905_0259089_809_1594 238
56 3300046472 Ga0495580_0276869 Ga0495580_0276869_140_949 238
57 iso_pu_bacteria 2599185354 2600203948 238
58 iso_pu_bacteria 2751185897 2753766906 238
59 3300005338 Ga0068868_100003013 Ga0068868_1000030132 239
60 3300005339 Ga0070660_100000258 Ga0070660_10000025838 239
61 3300005366 Ga0070659_100000022 Ga0070659_10000002296 239
62 3300025919 Ga0207657_10003941 Ga0207657_1000394117 239
63 3300025932 Ga0207690_10000003 Ga0207690_10000003741 239
64 3300026023 Ga0207677_10001724 Ga0207677_1000172410 239
65 3300031548 Ga0307408_100150912 Ga0307408_1001509122 239
66 3300031727 Ga0316576_10083024 Ga0316576_100830242 239
67 3300031903 Ga0307407_10029204 Ga0307407_100292043 239
68 3300032137 Ga0316585_10102740 Ga0316585_101027401 239
69 3300036647 Ga0316582_0032527 Ga0316582_0032527_572_1369 239
70 3300036712 Ga0316584_0012170 Ga0316584_0012170_4840_5637 239
71 3300039437 Ga0436365_1322259 Ga0436365_1322259_4403_5233 239
72 3300005563 Ga0068855_100928037 Ga0068855_1009280371 240
73 3300025928 Ga0207700_10477373 Ga0207700_104773732 240
74 3300025949 Ga0207667_10736520 Ga0207667_107365201 240
75 3300036401 Ga0373937_0018969 Ga0373937_0018969_464_1297 240
76 3300037068 Ga0373925_0074114 Ga0373925_0074114_1534_2367 240
77 3300039438 Ga0436360_0603394 Ga0436360_0603394_96_926 240
78 3300049571 Ga0501034_0430990 Ga0501034_0430990_395_1180 240
79 3300049573 Ga0501037_0075336 Ga0501037_0075336_729_1532 240
80 3300049576 Ga0501040_0035259 Ga0501040_0035259_1092_1895 240
81 3300049577 Ga0501041_0033450 Ga0501041_0033450_1205_2008 240
82 3300049578 Ga0501042_0019724 Ga0501042_0019724_771_1574 240
83 3300049579 Ga0501043_0112660 Ga0501043_0112660_797_1600 240
84 3300049580 Ga0501046_0011551 Ga0501046_0011551_5347_6150 240
85 3300049585 Ga0501069_0001412 Ga0501069_0001412_3294_4079 240
86 3300049591 Ga0501075_0039770 Ga0501075_0039770_1066_1869 240
87 3300049741 Ga0501079_0068195 Ga0501079_0068195_327_1130 240
88 3300049824 Ga0501045_0037419 Ga0501045_0037419_1639_2442 240
89 3300061734 Ga0530510_0031257 Ga0530510_0031257_1747_2550 240
90 3300006847 Ga0075431_100051565 Ga0075431_1000515654 242
91 3300009094 Ga0111539_10269108 Ga0111539_102691082 242
92 3300009177 Ga0105248_10019306 Ga0105248_100193061 242
93 3300009545 Ga0105237_10012732 Ga0105237_100127321 242
94 3300009551 Ga0105238_10030827 Ga0105238_100308272 242
95 3300009553 Ga0105249_10135680 Ga0105249_101356802 242
96 3300025924 Ga0207694_10007800 Ga0207694_100078002 242
97 3300025941 Ga0207711_10002689 Ga0207711_1000268915 242
98 3300026075 Ga0207708_10146720 Ga0207708_101467202 242
99 3300031911 Ga0307412_10045003 Ga0307412_100450033 242
100 3300046542 Ga0495597_0115725 Ga0495597_0115725_289_1083 242
101 3300046616 Ga0495668_0014923 Ga0495668_0014923_564_1358 242
102 3300047472 Ga0495686_0063890 Ga0495686_0063890_880_1674 242
103 3300049592 Ga0501076_0082757 Ga0501076_0082757_1043_1882 242
104 3300050511 nmdc:mga08y16_479378_c1 nmdc:mga08y16_479378_c1_154_993 242
105 3300053134 Ga0500658_0000651 Ga0500658_0000651_2464_3258 242
106 3300053139 Ga0500568_0008091 Ga0500568_0008091_2610_3404 242
107 3300053151 Ga0500604_0028683 Ga0500604_0028683_721_1515 242
108 3300053730 Ga0500645_016645 Ga0500645_016645_1396_2193 242
109 3300006844 Ga0075428_100770921 Ga0075428_1007709211 243
110 3300005436 Ga0070713_100122708 Ga0070713_1001227082 244
111 3300009177 Ga0105248_10034473 Ga0105248_100344734 244
112 3300025941 Ga0207711_10019451 Ga0207711_100194515 244
113 3300048928 Ga0496125_0098065 Ga0496125_0098065_906_1709 244
114 3300053087 Ga0500643_003158 Ga0500643_003158_4714_5520 244
115 iso_pu_bacteria 2852653556 2852654604 244
116 3300053120 Ga0500597_012883 Ga0500597_012883_2221_3054 245
117 3300053157 Ga0500624_000085 Ga0500624_000085_38973_39806 245
118 3300053178 Ga0500637_0000023 Ga0500637_0000023_33546_34379 245
119 3300049570 Ga0501033_0079536 Ga0501033_0079536_284_1102 246
120 3300049572 Ga0501036_0017650 Ga0501036_0017650_5079_5897 246
121 3300049574 Ga0501038_0045901 Ga0501038_0045901_902_1720 246
122 3300049580 Ga0501046_0246198 Ga0501046_0246198_124_942 246
123 3300049823 Ga0501044_0367963 Ga0501044_0367963_284_1102 246
124 3300049823 Ga0501044_0762163 Ga0501044_0762163_14_832 247
125 3300003781 Ga0055536_1001336 Ga0055536_10013367 248
126 3300003781 Ga0055536_1008208 Ga0055536_10082082 248
127 3300003781 Ga0055536_1021209 Ga0055536_10212092 248
128 3300003791 Ga0055530_10000388 Ga0055530_1000038826 248
129 3300003794 Ga0055531_10007322 Ga0055531_100073226 248
130 3300003794 Ga0055531_10018246 Ga0055531_100182463 248
131 3300025291 Ga0209675_1000137 Ga0209675_100013723 248
132 3300025292 Ga0209676_1000138 Ga0209676_100013861 248
133 3300025292 Ga0209676_1000344 Ga0209676_100034469 248
134 3300025292 Ga0209676_1000593 Ga0209676_100059344 248
135 3300025298 Ga0209050_1000115 Ga0209050_1000115164 248
136 3300025298 Ga0209050_1019500 Ga0209050_10195002 248
137 3300025298 Ga0209050_1031055 Ga0209050_10310552 248
138 3300025304 Ga0209257_1000160 Ga0209257_1000160138 248
139 3300025304 Ga0209257_1000445 Ga0209257_100044567 248
140 3300025304 Ga0209257_1003412 Ga0209257_10034126 248
141 3300031911 Ga0307412_10105456 Ga0307412_101054561 248
142 3300032004 Ga0307414_10005292 Ga0307414_100052925 248
143 3300032004 Ga0307414_10024592 Ga0307414_100245921 248
144 3300046522 Ga0495643_0079042 Ga0495643_0079042_189_1010 248
145 3300046660 Ga0495625_0001296 Ga0495625_0001296_12732_13553 248
146 3300047470 Ga0495681_0101636 Ga0495681_0101636_68_889 248
147 3300049573 Ga0501037_0017116 Ga0501037_0017116_2548_3366 248
148 3300053151 Ga0500604_0050913 Ga0500604_0050913_410_1231 248
149 3300053158 Ga0500627_0000097 Ga0500627_0000097_22369_23190 248

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02567

PhzC-PhzF

Phenazine biosynthesis-like protein

26

291

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
1s7j-assembly2.cif.gz_B crystal structure of phenazine biosynthesis protein phzf family (enterococcus faecalis) 0.8209 5 248
4dun-assembly1.cif.gz_A-2 1.76a x-ray crystal structure of a putative phenazine biosynthesis phzc/phzf protein from clostridium difficile (strain 630) 0.8208 7 244
1s7j-assembly2.cif.gz_B crystal structure of phenazine biosynthesis protein phzf family (enterococcus faecalis) 0.806 5 248
1u1x-assembly1.cif.gz_B structure and function of phenazine-biosynthesis protein phzf from pseudomonas fluorescens 2-79 0.8048 5 248
5iwe-assembly1.cif.gz_A-2 e45q mutant of phenazine biosynthesis protein phzf in complex with (5r,6r)-6-azaniumyl-5-ethoxycyclohexa-1,3-diene-1-carboxylate 0.8031 5 248
ID Description Score Start End Superfamily
af_A0A2R8Q0H1_3_123_3.10.310.10 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9074 9 117 3.10.310.10
1s7jA01 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9054 5 120 3.10.310.10
af_P38765_5_131_1.20.1730.10 Mainly Alpha;Up-down Bundle;Sodium/glucose cotransporter;Sodium/glucose cotransporter 0.9022 9 115 1.20.1730.10
af_K7LH11_6_125_3.10.310.10 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.8974 9 119 3.10.310.10
af_F4JHW1_176_307_3.10.310.10 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.8727 139 242 3.10.310.10
ID Description Score Start End GO Terms
AF-A0A848SF56-F1-model_v4 deleted 0.9975 7 87
AF-A0A520HV09-F1-model_v4 PhzF family phenazine biosynthesis protein 0.9776 5 127 GO:0005737
GO:0009058
GO:0016853
AF-A0A6J4SZT6-F1-model_v4 Phenazine biosynthesis protein PhzF like 0.9643 7 117 GO:0005737
GO:0009058
GO:0016853
AF-A0A3D2EAJ6-F1-model_v4 deleted 0.9594 4 135
AF-A0A520HV09-F1-model_v4 PhzF family phenazine biosynthesis protein 0.9542 5 127 GO:0005737
GO:0009058
GO:0016853

Feature Viewer

pLDDT pTM Quality
92.65 0.89 High
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Predicted Structure (AlphaFold2)

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