F206016

General Info

Members Datasets Scaffolds Average Seq Length
149 121 298 1029

Family's Representative Sequence

Representative Sequence 3300013297|Ga0157378_10001152|Ga0157378_1000115212
Length 1074
Sequence MATINNKTDIFLTQPWLAPAYPAGRLRKLMDEVQQIMNTIVLYKHLFFIAAVLVFSQALHSQKNAGPAPLYMDKGAILYTPDSLGNRIPDFSYCGYKASDHSIPSIDIKMVVPPIKGDATLRIQSALDYVGALPLDENGFRGAVLLQKGTYEIAGQLQINASGVVLRGSGMDKNGTTLIGTGTGRLALMKIIGKNNRQIGNAVKIADGYVPVNAMRFSVADAGSFKTGDKIIIRRPSVAVWIELLGTQTFGGGISALGWKPGDRDLFFDRTITKVDGNKLSIDAPLTTALDTNYGGGTVAAYNWNGRINNAGIENLRCFSVYDKSNTKDEDHRWNAINIENAEDAWVRQINFENFAGSAVSVLETAKRITVEDCKSLHPVSEIGGQRRCTFLTAGQQTLFQRCYAESGYHDFATGYCAPGPNAFVQCESHLPYNFSGTIDSWSCGILFDVVNIDGNALRFGNRGQDGNGAGWCAANSLLWNCSAARIDCYKPPTAQNWAFGSWGQFAGDGYWTESNNTIHPRSIFYGQLATRLHKNIDNQAQILYVPTEASSSPTVEVAAELIRQSVKPRMQLNEWIDSSCRRNPLSTASINVKTVDQIAIKKINKPVLSPIMQIKNGWLVRGNKILSGKRQSVPWWTGGIQGKDLEAALPAITRFVPGRSGKGLTDDLLELTDSMKAKGIIGMEQNYGLWYDRRRDDHERIRRMDGDVWPPFYELPFARSGKETAWDGLSKYDLTKYNLFYWSRLKQYADLADQKGLLLVHQNYFQHNIIEAGAHYVDFPWRSANNINNTGFPEPPPFAGDKRIFMAEQFYDITNPVRRELHKKFIRQCLNNFKDNNGVIQFIGEEFTGPLHFVQFWLQTIKDWEKENGRKQVIGLCVTKDVQDSILNNTDYASTVDLIDIRYWHYQADGVAYAPEGGQNLAPRQHARLLKPKKTSFDQVYRAVKEYRQKYPAKAVVYSGDSYPEFGWAVFMAGGSLPVLPSTIDTSFLSEAIAMKPADETGKYILEGNNGMIVYAGNEKTVELDLAKLKGIYRLKFLSTKDGTATSDSSITGGKKTSVDVPAGTGIIWLLNK

Samples

Sample ID Description Type Environment
1 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
7 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
17 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
20 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
26 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
34 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
35 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
38 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
39 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
40 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
41 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
42 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
43 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
59 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
60 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
61 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
62 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
63 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
64 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
65 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
66 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
67 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
68 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
69 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
70 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
71 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
72 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
73 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
74 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
75 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
76 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
77 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
78 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
79 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
80 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
81 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
82 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
83 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
84 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
85 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
86 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
87 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
88 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
89 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
90 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
91 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
92 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
94 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
95 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
96 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
97 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
98 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
99 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
100 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
101 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
102 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
103 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
104 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
105 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
106 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
107 2738541278 Niastella sp. CF465 Isolate Unclassified
108 2738541302 Pedobacter sp. CF074 Isolate Unclassified
109 2739367651 Pedobacter sp. OK291 Isolate Unclassified
110 2818991444 Filimonas endophytica 3197 Isolate Unclassified
111 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
112 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
113 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
114 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
115 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
116 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
117 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
118 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
119 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
120 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
121 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.26
Metatranscriptomes 0
Isolates 10.74

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.05
Nodule 0
Rhizoplane 0.67
Rhizosphere 79.19
Stem 0
Stem Tuber 0
Unclassified 1.34

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157378_10001152 3300013297 Bacteria 24031
2 JGI24735J21928_10000029 3300002067 Bacteria 81143
3 rootH1_10028289 3300003316 Bacteria 15240
4 rootH2_10001334 3300003320 Bacteria 238709
5 rootH2_10117674 3300003320 Bacteria 4561
6 rootH1_10007542 3300003323 Bacteria 7546
7 Ga0055536_1000011 3300003781 Bacteria 275969
8 Ga0055530_10001781 3300003791 Bacteria 14978
9 Ga0065712_10068460 3300005290 Bacteria 10482
10 Ga0068869_100013451 3300005334 Bacteria 5444
11 Ga0070666_10000029 3300005335 Bacteria 141568
12 Ga0070659_100000705 3300005366 Bacteria 24305
13 Ga0070685_10001083 3300005466 Bacteria 14560
14 Ga0070698_100001594 3300005471 Bacteria 25216
15 Ga0070698_100003564 3300005471 Bacteria 17106
16 Ga0070699_100035979 3300005518 Unclassified 4282
17 Ga0068856_100029606 3300005614 Bacteria 5349
18 Ga0068852_100010047 3300005616 Bacteria 7045
19 Ga0068859_100000035 3300005617 Bacteria 169846
20 Ga0068859_100004963 3300005617 Bacteria 13514
21 Ga0068864_100015703 3300005618 Bacteria 6298
22 Ga0068861_100010827 3300005719 Bacteria 6339
23 Ga0068851_10014825 3300005834 Bacteria 3707
24 Ga0068863_100001540 3300005841 Bacteria 22749
25 Ga0068858_100001641 3300005842 Bacteria 22831
26 Ga0068860_100050827 3300005843 Bacteria 3945
27 Ga0075428_100006109 3300006844 Bacteria 13399
28 Ga0075429_100007846 3300006880 Bacteria 9272
29 Ga0097620_100000035 3300006931 Bacteria 169846
30 Ga0097620_100004963 3300006931 Bacteria 13514
31 Ga0105240_10000010 3300009093 Bacteria 537830
32 Ga0105247_10005271 3300009101 Bacteria 8159
33 Ga0114129_10068135 3300009147 Unclassified 4962
34 Ga0105237_10001022 3300009545 Bacteria 37640
35 Ga0105237_10001655 3300009545 Bacteria 28910
36 Ga0105237_10003224 3300009545 Bacteria 19548
37 Ga0105249_10006160 3300009553 Bacteria 10407
38 Ga0105239_10000509 3300010375 Bacteria 56261
39 Ga0105239_10011858 3300010375 Bacteria 9725
40 Ga0157373_10000113 3300013100 Bacteria 63950
41 Ga0157371_10003273 3300013102 Bacteria 14843
42 Ga0157370_10049142 3300013104 Bacteria 4038
43 Ga0157369_10000002 3300013105 Bacteria 524510
44 Ga0157369_10000039 3300013105 Bacteria 188947
45 Ga0163162_10000723 3300013306 Bacteria 30644
46 Ga0163162_10007364 3300013306 Bacteria 10698
47 Ga0157372_10000001 3300013307 Bacteria 791349
48 Ga0157372_10016671 3300013307 Bacteria 7886
49 Ga0157375_10003971 3300013308 Bacteria 12829
50 Ga0182006_1000573 3300015261 Bacteria 27170
51 Ga0182006_1001169 3300015261 Bacteria 16546
52 Ga0163161_10000386 3300017792 Bacteria 36966
53 Ga0209026_1000326 3300025250 Bacteria 48276
54 Ga0209676_1000001 3300025292 Bacteria 1852142
55 Ga0209050_1000016 3300025298 Bacteria 729149
56 Ga0207695_10000019 3300025913 Bacteria 732137
57 Ga0207671_10000670 3300025914 Bacteria 44624
58 Ga0207671_10002385 3300025914 Bacteria 20172
59 Ga0207652_10000691 3300025921 Bacteria 32885
60 Ga0207644_10019592 3300025931 Bacteria 4592
61 Ga0207690_10000786 3300025932 Bacteria 20480
62 Ga0207689_10021354 3300025942 Bacteria 5444
63 Ga0207712_10023752 3300025961 Bacteria 4051
64 Ga0207703_10017148 3300026035 Bacteria 5649
65 Ga0207641_10000043 3300026088 Bacteria 186340
66 Ga0207641_10009628 3300026088 Bacteria 7965
67 Ga0207676_10012823 3300026095 Bacteria 6016
68 Ga0207675_100006781 3300026118 Bacteria 10834
69 Ga0207698_10001827 3300026142 Bacteria 12444
70 Ga0268264_10009053 3300028381 Bacteria 8260
71 Ga0307515_10000002 3300028794 Bacteria 1231751
72 Ga0307515_10000036 3300028794 Bacteria 332188
73 Ga0307515_10000311 3300028794 Bacteria 120044
74 Ga0307515_10017223 3300028794 Bacteria 13180
75 Ga0265327_10000245 3300031251 Bacteria 108670
76 Ga0307408_100000207 3300031548 Bacteria 63271
77 Ga0307408_100000271 3300031548 Bacteria 52116
78 Ga0307405_10000019 3300031731 Bacteria 167960
79 Ga0307407_10000019 3300031903 Bacteria 129701
80 Ga0307412_10002510 3300031911 Bacteria 10203
81 Ga0307409_100028508 3300031995 Bacteria 3979
82 Ga0307416_100000043 3300032002 Bacteria 130035
83 Ga0307414_10002629 3300032004 Bacteria 9446
84 Ga0395899_0000001 3300037312 Bacteria 1750322
85 Ga0395899_0000550 3300037312 Bacteria 40383
86 Ga0395900_0000048 3300037418 Bacteria 227760
87 Ga0451577_0000208 3300042876 Bacteria 122820
88 Ga0466969_0000308 3300044656 Bacteria 26976
89 Ga0466972_0000008 3300044658 Bacteria 264518
90 Ga0466966_0015817 3300044684 Bacteria 4985
91 Ga0453684_0000668 3300044712 Bacteria 122805
92 Ga0453684_0008830 3300044712 Bacteria 17871
93 Ga0466957_0001516 3300044842 Bacteria 12200
94 Ga0466959_0000241 3300045049 Bacteria 34027
95 Ga0451576_0000291 3300045051 Bacteria 122805
96 Ga0495650_0000025 3300046471 Bacteria 486001
97 Ga0495585_0000018 3300046492 Bacteria 162473
98 Ga0495606_0000026 3300046507 Bacteria 259118
99 Ga0495610_0000035 3300046512 Bacteria 189683
100 Ga0495610_0000489 3300046512 Bacteria 40454
101 Ga0495616_0000434 3300046513 Bacteria 31938
102 Ga0495648_0000864 3300046524 Bacteria 31952
103 Ga0495609_0001048 3300046538 Bacteria 19395
104 Ga0495633_0000046 3300046558 Bacteria 167647
105 Ga0495668_0000070 3300046616 Bacteria 174051
106 Ga0495668_0002313 3300046616 Bacteria 15944
107 Ga0495625_0000008 3300046660 Bacteria 536165
108 Ga0495625_0000616 3300046660 Bacteria 51665
109 Ga0495625_0003994 3300046660 Bacteria 14131
110 Ga0495625_0007677 3300046660 Bacteria 9343
111 Ga0495649_0000006 3300046694 Bacteria 542188
112 Ga0495687_001995 3300047443 Bacteria 17314
113 Ga0495684_0002590 3300047471 Bacteria 14373
114 Ga0495686_0000097 3300047472 Bacteria 183450
115 Ga0495686_0009728 3300047472 Bacteria 6901
116 Ga0495678_005574 3300049459 Bacteria 6898
117 Ga0501047_0004736 3300049581 Bacteria 12794
118 Ga0501202_000375 3300049652 Bacteria 6190
119 Ga0501243_000012 3300049675 Bacteria 15853
120 Ga0501259_000057 3300049688 Bacteria 15307
121 Ga0501261_000149 3300049690 Bacteria 10036
122 Ga0501225_0000084 3300049705 Bacteria 29650
123 Ga0501225_0001116 3300049705 Bacteria 8406
124 Ga0501245_000034 3300049708 Bacteria 12659
125 nmdc:mga0k408_343_c1 3300050493 Bacteria 25397
126 nmdc:mga0k408_942_c1 3300050493 Bacteria 15952
127 nmdc:mga05p37_36923_c1 3300050507 Bacteria 5993
128 Ga0500578_0002080 3300053086 Bacteria 17789
129 Ga0500583_0000094 3300053092 Bacteria 48535
130 Ga0500583_0001530 3300053092 Bacteria 6669
131 Ga0500616_0003169 3300053153 Bacteria 12823
132 Ga0500622_0000281 3300053156 Bacteria 51900
133 Ga0500611_000073 3300053727 Bacteria 40697
134 2599480237 2599185184 Bacteria 6430550
135 2738729881 2738541278 Bacteria 9755573
136 2738853331 2738541302 Bacteria 5944758
137 2739588714 2739367651 Bacteria 6359826
138 2819590569 2818991444 Bacteria 6968812
139 2842726114 2842722452 Bacteria 6263924
140 2842910387 2842909656 Bacteria 6185908
141 2852628678 2852627209 Bacteria 5896285
142 2896319142 2896317667 Bacteria 4606601
143 2919441719 2919437846 Bacteria 6199444
144 2928083487 2928078545 Bacteria 6534839
145 2928151250 2928147474 Bacteria 6512076
146 2929155973 2929154850 Bacteria 6753285
147 2932084548 2932082852 Bacteria 6563563
148 2946000725 2945997725 Bacteria 6404843
149 2954017610 2954016120 Bacteria 6446024
150 Ga0157378_10001152
151 JGI24735J21928_10000029
152 rootH1_10028289
153 rootH2_10001334
154 rootH2_10117674
155 rootH1_10007542
156 Ga0055536_1000011
157 Ga0055530_10001781
158 Ga0065712_10068460
159 Ga0068869_100013451
160 Ga0070666_10000029
161 Ga0070659_100000705
162 Ga0070685_10001083
163 Ga0070698_100001594
164 Ga0070698_100003564
165 Ga0070699_100035979
166 Ga0068856_100029606
167 Ga0068852_100010047
168 Ga0068859_100000035
169 Ga0068859_100004963
170 Ga0068864_100015703
171 Ga0068861_100010827
172 Ga0068851_10014825
173 Ga0068863_100001540
174 Ga0068858_100001641
175 Ga0068860_100050827
176 Ga0075428_100006109
177 Ga0075429_100007846
178 Ga0097620_100000035
179 Ga0097620_100004963
180 Ga0105240_10000010
181 Ga0105247_10005271
182 Ga0114129_10068135
183 Ga0105237_10001022
184 Ga0105237_10001655
185 Ga0105237_10003224
186 Ga0105249_10006160
187 Ga0105239_10000509
188 Ga0105239_10011858
189 Ga0157373_10000113
190 Ga0157371_10003273
191 Ga0157370_10049142
192 Ga0157369_10000002
193 Ga0157369_10000039
194 Ga0163162_10000723
195 Ga0163162_10007364
196 Ga0157372_10000001
197 Ga0157372_10016671
198 Ga0157375_10003971
199 Ga0182006_1000573
200 Ga0182006_1001169
201 Ga0163161_10000386
202 Ga0209026_1000326
203 Ga0209676_1000001
204 Ga0209050_1000016
205 Ga0207695_10000019
206 Ga0207671_10000670
207 Ga0207671_10002385
208 Ga0207652_10000691
209 Ga0207644_10019592
210 Ga0207690_10000786
211 Ga0207689_10021354
212 Ga0207712_10023752
213 Ga0207703_10017148
214 Ga0207641_10000043
215 Ga0207641_10009628
216 Ga0207676_10012823
217 Ga0207675_100006781
218 Ga0207698_10001827
219 Ga0268264_10009053
220 Ga0307515_10000002
221 Ga0307515_10000036
222 Ga0307515_10000311
223 Ga0307515_10017223
224 Ga0265327_10000245
225 Ga0307408_100000207
226 Ga0307408_100000271
227 Ga0307405_10000019
228 Ga0307407_10000019
229 Ga0307412_10002510
230 Ga0307409_100028508
231 Ga0307416_100000043
232 Ga0307414_10002629
233 Ga0395899_0000001
234 Ga0395899_0000550
235 Ga0395900_0000048
236 Ga0451577_0000208
237 Ga0466969_0000308
238 Ga0466972_0000008
239 Ga0466966_0015817
240 Ga0453684_0000668
241 Ga0453684_0008830
242 Ga0466957_0001516
243 Ga0466959_0000241
244 Ga0451576_0000291
245 Ga0495650_0000025
246 Ga0495585_0000018
247 Ga0495606_0000026
248 Ga0495610_0000035
249 Ga0495610_0000489
250 Ga0495616_0000434
251 Ga0495648_0000864
252 Ga0495609_0001048
253 Ga0495633_0000046
254 Ga0495668_0000070
255 Ga0495668_0002313
256 Ga0495625_0000008
257 Ga0495625_0000616
258 Ga0495625_0003994
259 Ga0495625_0007677
260 Ga0495649_0000006
261 Ga0495687_001995
262 Ga0495684_0002590
263 Ga0495686_0000097
264 Ga0495686_0009728
265 Ga0495678_005574
266 Ga0501047_0004736
267 Ga0501202_000375
268 Ga0501243_000012
269 Ga0501259_000057
270 Ga0501261_000149
271 Ga0501225_0000084
272 Ga0501225_0001116
273 Ga0501245_000034
274 nmdc:mga0k408_343_c1
275 nmdc:mga0k408_942_c1
276 nmdc:mga05p37_36923_c1
277 Ga0500578_0002080
278 Ga0500583_0000094
279 Ga0500583_0001530
280 Ga0500616_0003169
281 Ga0500622_0000281
282 Ga0500611_000073
283 2599480237
284 2738729881
285 2738853331
286 2739588714
287 2819590569
288 2842726114
289 2842910387
290 2852628678
291 2896319142
292 2919441719
293 2928083487
294 2928151250
295 2929155973
296 2932084548
297 2946000725
298 2954017610

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF19815

DUF6298

Family of unknown function (DUF6298)

510

996

1

Structural Annotation

Top 5 Hits

ID Description Score Start End
4qm1-assembly1.cif.gz_C crystal structure of the inosine 5'-monophosphate dehydrogenase with an internal deletion of the cbs domain from bacillus anthracis str. ames complexed with inhibitor d67 0.6593 800 949
5uwx-assembly1.cif.gz_C crystal structure of inosine 5'-monophosphate dehydrogenase from clostridium perfringens complexed with imp and p176 0.652 801 950
5urq-assembly1.cif.gz_B crystal structure of the catalytic domain of the inosine monophosphate dehydrogenase from campylobacter jejuni in the complex with inhibitor p176 0.6318 800 950
4z0g-assembly1.cif.gz_A structure of the impdh from ashbya gossypii bound to gmp 0.6283 800 950
5uqg-assembly1.cif.gz_D crystal structure of the catalytic domain of the inosine monophosphate dehydrogenase from campylobacter jejuni in the complex with inhibitor p200 0.6174 801 950
ID Description Score Start End Superfamily
af_Q75JX0_16_300_3.20.140.10 Alpha Beta;Alpha-Beta Barrel;nicotinate phosphoribosyltransferase;nicotinate phosphoribosyltransferase 0.6091 832 953 3.20.140.10
4qq3A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.6048 794 950 3.20.20.70
af_A0A1D6QE16_31_443_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.5907 578 866 3.20.20.80
af_A0A0P0XPW4_10_150_2.160.20.10 Mainly Beta;3 Solenoid;Pectate Lyase C-like;Single-stranded right-handed beta-helix, Pectin lyase-like 0.575 80 168 2.160.20.10
af_A0A1D6LSL8_83_290_2.160.20.10 Mainly Beta;3 Solenoid;Pectate Lyase C-like;Single-stranded right-handed beta-helix, Pectin lyase-like 0.5659 82 346 2.160.20.10
ID Description Score Start End GO Terms
AF-A0A4Q5Z5M8-F1-model_v4 Pectate lyase 0.9803 32 365 GO:0016829
AF-A0A519UED9-F1-model_v4 Pectate lyase 0.9742 103 401 GO:0016829
AF-A0A7V2MD30-F1-model_v4 Pectate lyase 0.9655 30 398 GO:0016829
AF-A0A2V6F2U3-F1-model_v4 Uncharacterized protein 0.9653 31 353
AF-W4UR52-F1-model_v4 Pectate lyase 0.9576 30 319 GO:0004557

Map