F207203

General Info

Members Datasets Scaffolds Average Seq Length
149 122 149 704

Family's Representative Sequence

Representative Sequence 3300049581|Ga0501047_0017782|Ga0501047_0017782_2553_4826
Length 757
Sequence MSEPAPDPTPDARRGVAWWAGRTIVWARFLVVAAWIVGAVLATQRLPSGFGGESAELGSLLPRSSEALEVEERSLRTFGFPLISRSMVVAHKEGGFDPADARAALRYIARTDRSDAGLRAVPFDAEGHPLEGGKVGETLLVYLYVEPAAEASATTASEEFAAGLRRASGADTAHVTGAIPASAAESNLVEEHLPWVEIATVVLVVGILLLYYRSLLIPLLCLAGVGLSYLLADRLLGVVAERFGLAIPEEVQPVIVALLFGVLTDYLVFFVSGFRRRLERGESRLGAATAVAGDLLPVVATAALMIAGATMTLSLSGVDFLSAFGPAMAISVLAAAVVSLTFVPACLAILGRAVFWPRRVEAPADDGAPREPEPPRARGRVVGLAARHPALVVVICLAALLAAASGLRHLELGNPILRGLPTTTQTRQGYDEATQAFGPGVLGPTMLVVEGEGVDDAAALTGLQEGIEAQPGIASVVGPARRLSAVPAGVFIARSGNAARFLVVLEADPDGPVAPEILARLEGKLPALLARSGMRGATFGVTGDTTIGHELTEDTWHAGLRVAPAALAVLLVLLWLLLRSRTAPLYLVGSSLLVVAAALGLTVYVFQGLLGYNELAFFVPVATAILMLALGADYNVFLVSRIWREAERRDLRAAIRTGGTRASSAIAVAGLILALSFAAVWLIPIAAFRELAFALFVGLMLDTWLARPLLVPALVSLFGGGGDRDRPPAEDRPQSPPSGGEEIAGFSPSSHGSMSGR

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
6 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
10 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
11 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
14 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
17 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
18 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
19 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
20 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
21 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
22 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
23 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
24 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
25 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
26 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
27 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
28 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
29 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
30 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
31 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
32 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
33 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
53 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
54 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
55 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
56 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
57 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
58 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
59 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
60 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
61 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
62 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
63 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
64 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
65 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
66 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
67 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
68 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
69 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
70 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
71 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
72 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
73 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
74 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
75 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
76 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
77 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
78 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
79 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
80 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
81 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
82 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
83 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
84 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
85 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
86 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
87 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
88 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
89 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
90 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
91 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
92 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
93 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
94 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
95 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
107 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
108 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
109 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
110 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
111 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
112 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
114 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
115 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
116 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
117 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
118 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
119 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
120 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
121 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
122 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.01
Nodule 0
Rhizoplane 11.41
Rhizosphere 81.88
Stem 0
Stem Tuber 0
Unclassified 4.7

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000948 3300001979 Bacteria 12883
2 Ga0070677_10000007 3300005333 Bacteria 74721
3 Ga0070682_100000556 3300005337 Bacteria 23033
4 Ga0068868_100000095 3300005338 Bacteria 54537
5 Ga0070688_100000705 3300005365 Bacteria 16441
6 Ga0070688_100007279 3300005365 Bacteria 5962
7 Ga0070667_100006012 3300005367 Bacteria 10084
8 Ga0070713_100000005 3300005436 Bacteria 201526
9 Ga0070711_100015410 3300005439 Bacteria 4839
10 Ga0070663_100001354 3300005455 Bacteria 13389
11 Ga0068867_100000330 3300005459 Bacteria 31275
12 Ga0070685_10000012 3300005466 Bacteria 128823
13 Ga0070679_100033640 3300005530 Bacteria 5076
14 Ga0070665_100000604 3300005548 Bacteria 49409
15 Ga0068854_100000062 3300005578 Bacteria 78159
16 Ga0068856_100000377 3300005614 Bacteria 48877
17 Ga0068856_100083232 3300005614 Bacteria 3177
18 Ga0068852_100000022 3300005616 Bacteria 125196
19 Ga0068851_10000297 3300005834 Bacteria 22748
20 Ga0068863_100018074 3300005841 Bacteria 6751
21 Ga0068858_100000343 3300005842 Bacteria 49409
22 Ga0081455_10013257 3300005937 Bacteria 8164
23 Ga0070715_10000001 3300006163 Bacteria 693690
24 Ga0068865_100000135 3300006881 Bacteria 38521
25 Ga0105245_10000023 3300009098 Bacteria 180844
26 Ga0105245_10000049 3300009098 Bacteria 128277
27 Ga0105245_10003920 3300009098 Bacteria 13225
28 Ga0105242_10000200 3300009176 Bacteria 46508
29 Ga0105248_10000245 3300009177 Bacteria 62951
30 Ga0105239_10054599 3300010375 Bacteria 4383
31 Ga0157371_10014617 3300013102 Bacteria 5915
32 Ga0157370_10003533 3300013104 Bacteria 18310
33 Ga0157370_10029409 3300013104 Bacteria 5391
34 Ga0157369_10000014 3300013105 Bacteria 266411
35 Ga0157374_10001285 3300013296 Bacteria 21373
36 Ga0157375_10000127 3300013308 Bacteria 75142
37 Ga0157379_10021426 3300014968 Bacteria 5721
38 Ga0207656_10000084 3300025321 Bacteria 35284
39 Ga0207682_10000007 3300025893 Bacteria 88967
40 Ga0207710_10000296 3300025900 Bacteria 40066
41 Ga0207685_10000005 3300025905 Bacteria 289944
42 Ga0207652_10000283 3300025921 Bacteria 52945
43 Ga0207687_10000015 3300025927 Bacteria 261701
44 Ga0207687_10000189 3300025927 Bacteria 41272
45 Ga0207687_10013220 3300025927 Bacteria 5391
46 Ga0207700_10000003 3300025928 Bacteria 500797
47 Ga0207686_10001015 3300025934 Bacteria 16623
48 Ga0207704_10000026 3300025938 Bacteria 123892
49 Ga0207711_10000192 3300025941 Bacteria 65599
50 Ga0207640_10000074 3300025981 Bacteria 78164
51 Ga0207658_10000691 3300025986 Bacteria 29389
52 Ga0207677_10000246 3300026023 Bacteria 41847
53 Ga0207703_10004225 3300026035 Bacteria 11837
54 Ga0207678_10013062 3300026067 Bacteria 7285
55 Ga0207702_10000085 3300026078 Bacteria 106728
56 Ga0207702_10002252 3300026078 Bacteria 18493
57 Ga0207648_10001238 3300026089 Bacteria 28690
58 Ga0207698_10000043 3300026142 Bacteria 96553
59 Ga0268266_10000020 3300028379 Bacteria 527065
60 Ga0451853_3745381 3300041512 Bacteria 3331
61 Ga0466963_0000066 3300044694 Bacteria 35983
62 Ga0466957_0002465 3300044842 Bacteria 9942
63 Ga0466967_0000010 3300045976 Bacteria 117249
64 Ga0466967_0000199 3300045976 Bacteria 25095
65 Ga0495592_0001677 3300046454 Bacteria 15524
66 Ga0495629_0001646 3300046459 Bacteria 17540
67 Ga0495641_0000001 3300046461 Bacteria 485224
68 Ga0495662_0000043 3300046476 Bacteria 42697
69 Ga0495608_0000013 3300046511 Bacteria 228481
70 Ga0495618_0000072 3300046514 Bacteria 72012
71 Ga0495628_0035614 3300046516 Bacteria 3999
72 Ga0495628_0038061 3300046516 Unclassified 3853
73 Ga0495630_0001103 3300046517 Bacteria 18562
74 Ga0495652_0001414 3300046529 Bacteria 26617
75 Ga0495640_0004951 3300046533 Bacteria 10587
76 Ga0495645_0008797 3300046543 Bacteria 7051
77 Ga0495645_0094888 3300046543 Bacteria 2127
78 Ga0495634_0001672 3300046642 Bacteria 19337
79 Ga0495657_0000003 3300046675 Bacteria 279680
80 Ga0495647_0000004 3300046681 Bacteria 140700
81 Ga0495613_0000083 3300046689 Bacteria 90138
82 Ga0495613_0000094 3300046689 Bacteria 86601
83 Ga0495613_0039857 3300046689 Bacteria 3481
84 Ga0495624_0000028 3300046690 Bacteria 93474
85 Ga0495600_0000634 3300046809 Bacteria 18143
86 Ga0495604_0000293 3300047317 Bacteria 44767
87 Ga0495674_0000025 3300047319 Bacteria 141103
88 Ga0495675_0000002 3300047444 Bacteria 216469
89 Ga0495593_0024905 3300047673 Bacteria 3312
90 Ga0495602_0000041 3300048088 Bacteria 126954
91 Ga0495602_0005861 3300048088 Bacteria 12897
92 Ga0496100_0000028 3300048903 Bacteria 113912
93 Ga0496101_0000005 3300048904 Bacteria 331455
94 Ga0496102_0005455 3300048905 Bacteria 10789
95 Ga0496103_0007040 3300048906 Bacteria 6713
96 Ga0496104_0000003 3300048907 Bacteria 669219
97 Ga0496104_0000007 3300048907 Bacteria 524804
98 Ga0496104_0011315 3300048907 Bacteria 7987
99 Ga0496105_0000002 3300048908 Bacteria 753215
100 Ga0496105_0000003 3300048908 Bacteria 713251
101 Ga0496106_0000013 3300048909 Bacteria 202263
102 Ga0496106_0000033 3300048909 Bacteria 131412
103 Ga0496107_0000004 3300048910 Bacteria 297680
104 Ga0496108_0000005 3300048911 Bacteria 535059
105 Ga0496109_0000002 3300048912 Bacteria 443393
106 Ga0496112_0000006 3300048915 Bacteria 365227
107 Ga0496112_0005405 3300048915 Bacteria 11044
108 Ga0496113_0000001 3300048916 Bacteria 224977
109 Ga0496117_0001366 3300048920 Bacteria 35586
110 Ga0496118_0000090 3300048921 Bacteria 175645
111 Ga0496118_0056148 3300048921 Bacteria 2963
112 Ga0496119_0020330 3300048922 Bacteria 4847
113 Ga0496120_0007553 3300048923 Bacteria 8072
114 Ga0496121_0008674 3300048924 Bacteria 11874
115 Ga0501031_0000830 3300049568 Bacteria 18572
116 Ga0501032_0001456 3300049569 Bacteria 18822
117 Ga0501033_0001789 3300049570 Bacteria 18764
118 Ga0501034_0005164 3300049571 Bacteria 14316
119 Ga0501036_0006928 3300049572 Bacteria 9215
120 Ga0501037_0001244 3300049573 Bacteria 18772
121 Ga0501038_0002027 3300049574 Bacteria 18724
122 Ga0501043_0007220 3300049579 Bacteria 8824
123 Ga0501046_0002444 3300049580 Bacteria 17414
124 Ga0501047_0000566 3300049581 Bacteria 39544
125 Ga0501047_0017782 3300049581 Bacteria 6810
126 Ga0501048_0006168 3300049582 Bacteria 9125
127 Ga0501069_0001940 3300049585 Bacteria 10330
128 Ga0501070_0002339 3300049586 Bacteria 16642
129 Ga0501070_0003391 3300049586 Bacteria 13828
130 Ga0501074_0007274 3300049590 Bacteria 8002
131 Ga0501079_0006245 3300049741 Bacteria 8944
132 Ga0501080_0031340 3300049742 Bacteria 4954
133 Ga0501083_0005901 3300049744 Bacteria 8665
134 Ga0501035_0000606 3300049822 Bacteria 39544
135 Ga0501035_0065932 3300049822 Bacteria 3214
136 Ga0501044_0003126 3300049823 Bacteria 18766
137 Ga0495601_0000017 3300053077 Bacteria 204209
138 Ga0495601_0000131 3300053077 Bacteria 42431
139 Ga0495612_0005377 3300053078 Bacteria 5291
140 Ga0495655_0000001 3300053083 Bacteria 419518
141 Ga0495655_0000401 3300053083 Bacteria 7348
142 Ga0495595_0000007 3300053084 Bacteria 228504
143 Ga0495619_0000054 3300053085 Bacteria 97928
144 Ga0495619_0002704 3300053085 Bacteria 11593
145 Ga0495619_0022877 3300053085 Bacteria 4002
146 Ga0500595_013976 3300053119 Bacteria 3060
147 Ga0500614_001780 3300053123 Bacteria 4997
148 Ga0500628_000010 3300053129 Bacteria 122210
149 Ga0501082_0008332 3300060353 Bacteria 8942

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300026089 Ga0207648_10001238 Ga0207648_1000123818 554
2 3300046543 Ga0495645_0094888 Ga0495645_0094888_118_2115 556
3 3300053083 Ga0495655_0000001 Ga0495655_0000001_176824_178899 571
4 3300053129 Ga0500628_000010 Ga0500628_000010_51025_53100 571
5 3300014968 Ga0157379_10021426 Ga0157379_100214264 580
6 3300005841 Ga0068863_100018074 Ga0068863_1000180744 592
7 3300046809 Ga0495600_0000634 Ga0495600_0000634_11241_13370 596
8 3300048915 Ga0496112_0005405 Ga0496112_0005405_3258_5378 598
9 3300048916 Ga0496113_0000001 Ga0496113_0000001_55481_57601 598
10 3300049586 Ga0501070_0003391 Ga0501070_0003391_10691_12802 602
11 3300048924 Ga0496121_0008674 Ga0496121_0008674_3072_5168 604
12 3300046459 Ga0495629_0001646 Ga0495629_0001646_9779_11893 609
13 3300047317 Ga0495604_0000293 Ga0495604_0000293_36226_38352 610
14 3300005436 Ga0070713_100000005 Ga0070713_100000005211 612
15 3300006163 Ga0070715_10000001 Ga0070715_10000001442 612
16 3300025905 Ga0207685_10000005 Ga0207685_10000005290 612
17 3300025928 Ga0207700_10000003 Ga0207700_10000003401 612
18 3300048905 Ga0496102_0005455 Ga0496102_0005455_7928_10105 616
19 3300048920 Ga0496117_0001366 Ga0496117_0001366_29277_31454 616
20 3300048921 Ga0496118_0000090 Ga0496118_0000090_50691_52868 616
21 3300046689 Ga0495613_0000094 Ga0495613_0000094_26411_28537 617
22 3300048909 Ga0496106_0000013 Ga0496106_0000013_135307_137460 617
23 3300053077 Ga0495601_0000017 Ga0495601_0000017_150993_153119 617
24 3300041512 Ga0451853_3745381 Ga0451853_3745381_607_2820 618
25 3300026078 Ga0207702_10002252 Ga0207702_1000225216 620
26 3300005614 Ga0068856_100083232 Ga0068856_1000832322 621
27 3300046514 Ga0495618_0000072 Ga0495618_0000072_56039_58255 624
28 3300005439 Ga0070711_100015410 Ga0070711_1000154104 625
29 3300005614 Ga0068856_100000377 Ga0068856_10000037743 626
30 3300026078 Ga0207702_10000085 Ga0207702_1000008554 626
31 3300046461 Ga0495641_0000001 Ga0495641_0000001_388359_390680 626
32 3300048903 Ga0496100_0000028 Ga0496100_0000028_14134_16458 626
33 3300048904 Ga0496101_0000005 Ga0496101_0000005_164133_166457 626
34 3300048909 Ga0496106_0000033 Ga0496106_0000033_114122_116446 626
35 3300048910 Ga0496107_0000004 Ga0496107_0000004_164350_166674 626
36 3300048921 Ga0496118_0056148 Ga0496118_0056148_455_2602 626
37 3300053085 Ga0495619_0002704 Ga0495619_0002704_5031_7199 626
38 3300053123 Ga0500614_001780 Ga0500614_001780_1222_3543 626
39 3300009098 Ga0105245_10003920 Ga0105245_1000392013 627
40 3300006881 Ga0068865_100000135 Ga0068865_10000013537 629
41 3300025938 Ga0207704_10000026 Ga0207704_1000002669 629
42 3300045976 Ga0466967_0000010 Ga0466967_0000010_52749_54986 631
43 3300046529 Ga0495652_0001414 Ga0495652_0001414_23549_25732 631
44 3300046543 Ga0495645_0008797 Ga0495645_0008797_57_2240 631
45 3300005548 Ga0070665_100000604 Ga0070665_1000006048 632
46 3300005842 Ga0068858_100000343 Ga0068858_1000003438 632
47 3300026035 Ga0207703_10004225 Ga0207703_100042258 632
48 3300028379 Ga0268266_10000020 Ga0268266_10000020517 632
49 3300047673 Ga0495593_0024905 Ga0495593_0024905_10_2097 632
50 3300048906 Ga0496103_0007040 Ga0496103_0007040_507_2666 634
51 3300044842 Ga0466957_0002465 Ga0466957_0002465_5970_8090 635
52 3300053077 Ga0495601_0000131 Ga0495601_0000131_16006_18258 635
53 3300053085 Ga0495619_0000054 Ga0495619_0000054_63819_65915 635
54 3300005367 Ga0070667_100006012 Ga0070667_1000060126 636
55 3300025986 Ga0207658_10000691 Ga0207658_1000069121 636
56 3300010375 Ga0105239_10054599 Ga0105239_100545994 639
57 3300005459 Ga0068867_100000330 Ga0068867_1000003308 640
58 3300044694 Ga0466963_0000066 Ga0466963_0000066_13301_15415 640
59 3300048923 Ga0496120_0007553 Ga0496120_0007553_2438_4621 640
60 3300046516 Ga0495628_0038061 Ga0495628_0038061_1326_3548 641
61 3300013308 Ga0157375_10000127 Ga0157375_1000012773 642
62 3300053119 Ga0500595_013976 Ga0500595_013976_380_2635 642
63 3300005365 Ga0070688_100000705 Ga0070688_10000070520 643
64 3300005466 Ga0070685_10000012 Ga0070685_1000001234 643
65 3300005616 Ga0068852_100000022 Ga0068852_100000022102 643
66 3300009177 Ga0105248_10000245 Ga0105248_1000024546 643
67 3300013102 Ga0157371_10014617 Ga0157371_100146173 643
68 3300013104 Ga0157370_10003533 Ga0157370_1000353318 643
69 3300013105 Ga0157369_10000014 Ga0157369_10000014204 643
70 3300025927 Ga0207687_10000015 Ga0207687_10000015151 643
71 3300025941 Ga0207711_10000192 Ga0207711_1000019246 643
72 3300026142 Ga0207698_10000043 Ga0207698_1000004322 643
73 3300045976 Ga0466967_0000199 Ga0466967_0000199_14500_16620 643
74 3300046690 Ga0495624_0000028 Ga0495624_0000028_69413_71689 643
75 3300048911 Ga0496108_0000005 Ga0496108_0000005_191371_193491 643
76 3300048912 Ga0496109_0000002 Ga0496109_0000002_341601_343721 643
77 3300005338 Ga0068868_100000095 Ga0068868_10000009529 644
78 3300026023 Ga0207677_10000246 Ga0207677_1000024620 644
79 3300005337 Ga0070682_100000556 Ga0070682_1000005567 645
80 3300005578 Ga0068854_100000062 Ga0068854_10000006242 645
81 3300005834 Ga0068851_10000297 Ga0068851_1000029717 645
82 3300009098 Ga0105245_10000023 Ga0105245_1000002330 645
83 3300013296 Ga0157374_10001285 Ga0157374_1000128518 645
84 3300025321 Ga0207656_10000084 Ga0207656_1000008412 645
85 3300025981 Ga0207640_10000074 Ga0207640_1000007441 645
86 3300048088 Ga0495602_0000041 Ga0495602_0000041_55477_57603 645
87 3300053083 Ga0495655_0000401 Ga0495655_0000401_3571_5697 645
88 3300046689 Ga0495613_0039857 Ga0495613_0039857_420_2675 646
89 3300013104 Ga0157370_10029409 Ga0157370_100294094 647
90 3300049568 Ga0501031_0000830 Ga0501031_0000830_4237_6393 648
91 3300049569 Ga0501032_0001456 Ga0501032_0001456_4466_6622 648
92 3300049570 Ga0501033_0001789 Ga0501033_0001789_12191_14347 648
93 3300049571 Ga0501034_0005164 Ga0501034_0005164_2614_4770 648
94 3300049572 Ga0501036_0006928 Ga0501036_0006928_2674_4830 648
95 3300049573 Ga0501037_0001244 Ga0501037_0001244_12141_14297 648
96 3300049574 Ga0501038_0002027 Ga0501038_0002027_4214_6370 648
97 3300049579 Ga0501043_0007220 Ga0501043_0007220_4413_6569 648
98 3300049580 Ga0501046_0002444 Ga0501046_0002444_4209_6365 648
99 3300049581 Ga0501047_0000566 Ga0501047_0000566_25203_27359 648
100 3300049582 Ga0501048_0006168 Ga0501048_0006168_2629_4785 648
101 3300049586 Ga0501070_0002339 Ga0501070_0002339_12184_14340 648
102 3300049590 Ga0501074_0007274 Ga0501074_0007274_3307_5463 648
103 3300049741 Ga0501079_0006245 Ga0501079_0006245_2671_4827 648
104 3300049742 Ga0501080_0031340 Ga0501080_0031340_641_2797 648
105 3300049744 Ga0501083_0005901 Ga0501083_0005901_2639_4795 648
106 3300049822 Ga0501035_0000606 Ga0501035_0000606_25203_27359 648
107 3300049823 Ga0501044_0003126 Ga0501044_0003126_12186_14342 648
108 3300060353 Ga0501082_0008332 Ga0501082_0008332_2625_4781 648
109 3300053085 Ga0495619_0022877 Ga0495619_0022877_1496_3688 649
110 3300025927 Ga0207687_10013220 Ga0207687_100132202 653
111 3300046511 Ga0495608_0000013 Ga0495608_0000013_3960_6146 655
112 3300046675 Ga0495657_0000003 Ga0495657_0000003_55159_57345 655
113 3300047444 Ga0495675_0000002 Ga0495675_0000002_55159_57345 655
114 3300053084 Ga0495595_0000007 Ga0495595_0000007_3983_6169 655
115 3300046454 Ga0495592_0001677 Ga0495592_0001677_12431_14596 657
116 3300046642 Ga0495634_0001672 Ga0495634_0001672_9856_12102 657
117 3300025900 Ga0207710_10000296 Ga0207710_1000029626 660
118 3300046533 Ga0495640_0004951 Ga0495640_0004951_3014_5263 660
119 3300047319 Ga0495674_0000025 Ga0495674_0000025_8882_11131 660
120 3300046681 Ga0495647_0000004 Ga0495647_0000004_31780_33996 661
121 3300048915 Ga0496112_0000006 Ga0496112_0000006_200870_203101 662
122 3300005455 Ga0070663_100001354 Ga0070663_10000135414 663
123 3300005530 Ga0070679_100033640 Ga0070679_1000336403 663
124 3300025921 Ga0207652_10000283 Ga0207652_100002831 663
125 3300026067 Ga0207678_10013062 Ga0207678_100130627 663
126 3300046516 Ga0495628_0035614 Ga0495628_0035614_1123_3357 663
127 3300053078 Ga0495612_0005377 Ga0495612_0005377_2187_4421 663
128 3300009098 Ga0105245_10000049 Ga0105245_1000004990 664
129 3300025927 Ga0207687_10000189 Ga0207687_1000018917 664
130 3300046517 Ga0495630_0001103 Ga0495630_0001103_312_2507 665
131 3300048907 Ga0496104_0000007 Ga0496104_0000007_502954_505161 665
132 3300048908 Ga0496105_0000002 Ga0496105_0000002_705893_708100 665
133 3300048922 Ga0496119_0020330 Ga0496119_0020330_2252_4459 665
134 3300005937 Ga0081455_10013257 Ga0081455_100132577 666
135 3300005333 Ga0070677_10000007 Ga0070677_1000000763 669
136 3300025893 Ga0207682_10000007 Ga0207682_1000000771 669
137 3300046689 Ga0495613_0000083 Ga0495613_0000083_76665_78911 669
138 3300049585 Ga0501069_0001940 Ga0501069_0001940_5721_7958 669
139 3300005365 Ga0070688_100007279 Ga0070688_1000072792 670
140 3300048907 Ga0496104_0000003 Ga0496104_0000003_596136_598352 671
141 3300048908 Ga0496105_0000003 Ga0496105_0000003_587769_589985 671
142 3300009176 Ga0105242_10000200 Ga0105242_1000020030 672
143 3300025934 Ga0207686_10001015 Ga0207686_1000101515 672
144 3300048907 Ga0496104_0011315 Ga0496104_0011315_5514_7748 678
145 3300048088 Ga0495602_0005861 Ga0495602_0005861_7800_10040 679
146 3300046476 Ga0495662_0000043 Ga0495662_0000043_16284_18533 682
147 3300049822 Ga0501035_0065932 Ga0501035_0065932_909_3179 682
148 3300049581 Ga0501047_0017782 Ga0501047_0017782_2553_4826 683
149 3300001979 JGI24740J21852_10000948 JGI24740J21852_1000094810 694

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03176

MMPL

MMPL family

418

734

0.85

PF03176

MMPL

MMPL family

61

404

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
3zzp-assembly1.cif.gz_A circular permutant of ribosomal protein s6, lacking edge strand beta- 2 of wild-type s6. 0.7184 83 169
3zzp-assembly1.cif.gz_A circular permutant of ribosomal protein s6, lacking edge strand beta- 2 of wild-type s6. 0.6949 83 169
5ent-assembly1.cif.gz_B minocycline bound structure of bacterial efflux pump. 0.6337 85 178
7b8s-assembly1.cif.gz_B fusidic acid bound structure of bacterial efflux pump. 0.633 85 178
5enq-assembly1.cif.gz_B mbx3132 bound structure of bacterial efflux pump. 0.6303 85 178
ID Description Score Start End Superfamily
af_P9WJU1_134_330_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.7282 181 308 1.20.1640.10
3zzpA00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Ribosomal protein S6/Translation elongation factor EF1B 0.7184 83 169 3.30.70.60
af_Q8I266_1272_1469_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.7096 179 310 1.20.1640.10
af_P9WJV5_157_342_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.7029 181 313 1.20.1640.10
3zzpA00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Ribosomal protein S6/Translation elongation factor EF1B 0.6949 83 169 3.30.70.60
ID Description Score Start End GO Terms
AF-A0A7W0XX33-F1-model_v4 MMPL family transporter 0.7825 241 661 GO:0005886
AF-A0A852WKP8-F1-model_v4 RND superfamily putative drug exporter 0.7805 14 661 GO:0005886
AF-A0A2W6CZ63-F1-model_v4 Membrane transport protein MMPL domain-containing protein 0.7781 14 580 GO:0005886
AF-A0A7W0S2J9-F1-model_v4 MMPL family transporter 0.7715 68 669 GO:0005886
AF-A0A6J4SSM3-F1-model_v4 SSD domain-containing protein 0.7678 336 662 GO:0005886

Feature Viewer

pLDDT pTM Quality
59.17 0.5 Medium
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Predicted Structure (AlphaFold2)

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