F207445

General Info

Members Datasets Scaffolds Average Seq Length
149 92 146 457

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2913939268|2913944036
Length 516
Sequence KSKTKNRRLFARNYAVNSQSNSKVKLFNQAIKRLSPSWQACLPIACLIVLGWGYAAVAQAPAAGPTTAELKVALDTLWVAIAAFLVFFMNAGFCMLETGFCRQKNAVNVLSKNLIVFALSSVAFWVIGFGLMFGDGNDFIGLNGFFLGGADNSPATGEAYKGVFSAISWTGVPLSAKFLFQLVFAGTAATIVSGAVAERIKFVDFLIFSLLLVGILYPITGHWIWGTGWLADRGFWDFAGSTVVHSVGGWAALMGAAFLGPRLGRYQDRQVVAMPGHNMSIATLGCLILWLGWFGFNPGSVMAADPSAISHIAVTTNMAGAAGGIAATITAWFYLGKPDLSMIINGILAGLVGVTASCAYVSISASLLIGLIAGILVVFSVTFFDKLGIDDPVGATSVHLVCGTWGTLAVGLWSVGPGVYSWYGDTLGPAKGLFAGGGFGQFGVQLLGVVSVGGFTVLLSSIFWLALKATLGIRVSKEEELEGLDIGEHGMEAYSGFLKEGDATGFSEEESSIGRL

Samples

Sample ID Description Type Environment
1 2913844669 Nostocales cyanobacterium LEGE 12452 Isolate Unclassified
2 2913912277 Desmonostoc muscorum LEGE 12446 Isolate Unclassified
3 2913939268 Nostoc sp. LEGE 12447 Isolate Unclassified
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
17 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
26 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
27 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
28 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
29 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
30 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
41 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
43 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
44 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
45 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
46 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
47 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
48 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
49 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
50 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
51 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
52 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
53 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
54 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
55 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
56 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
57 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
58 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
59 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
60 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
61 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
62 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
63 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
64 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
65 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
66 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
72 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
73 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
74 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
75 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
76 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
77 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
78 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
79 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
80 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
81 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
82 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
83 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
84 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
87 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
88 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
89 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
90 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
91 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
92 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.64
Metatranscriptomes 1.34
Isolates 2.01

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.01
Nodule 0
Rhizoplane 0
Rhizosphere 94.63
Stem 0
Stem Tuber 0
Unclassified 3.36

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10005815 3300003320 Bacteria 16762
2 Ga0065715_10000608 3300005293 Bacteria 11704
3 Ga0065707_10081999 3300005295 Bacteria 25570
4 Ga0070670_100017120 3300005331 Bacteria 6219
5 Ga0070677_10016287 3300005333 Bacteria 2645
6 Ga0068868_100008809 3300005338 Bacteria 7229
7 Ga0070661_100017012 3300005344 Bacteria 5151
8 Ga0070669_100144462 3300005353 Bacteria 1837
9 Ga0070675_100000528 3300005354 Bacteria 26103
10 Ga0070675_100079593 3300005354 Bacteria 2731
11 Ga0070673_100028064 3300005364 Bacteria 4181
12 Ga0070672_100000492 3300005543 Bacteria 22987
13 Ga0070665_100004697 3300005548 Bacteria 14259
14 Ga0070664_100013411 3300005564 Bacteria 6676
15 Ga0068864_100000266 3300005618 Bacteria 46438
16 Ga0068858_100114892 3300005842 Bacteria 2515
17 Ga0068862_100018416 3300005844 Bacteria 5815
18 Ga0081539_10003297 3300005985 Bacteria 20197
19 Ga0075367_10027702 3300006178 Unclassified 3226
20 Ga0075428_100000008 3300006844 Bacteria 271300
21 Ga0075431_100041643 3300006847 Unclassified 4736
22 Ga0111539_10000015 3300009094 Bacteria 296576
23 Ga0111539_10008738 3300009094 Bacteria 12849
24 Ga0111539_10022973 3300009094 Bacteria 7657
25 Ga0111539_10119186 3300009094 Bacteria 3093
26 Ga0105242_10051294 3300009176 Bacteria 3362
27 Ga0105248_10002077 3300009177 Bacteria 22165
28 Ga0105238_10000079 3300009551 Bacteria 109619
29 Ga0163162_10005993 3300013306 Bacteria 11771
30 Ga0157375_10045169 3300013308 Bacteria 4287
31 Ga0207680_10010317 3300025903 Bacteria 4668
32 Ga0207694_10001932 3300025924 Bacteria 17158
33 Ga0207650_10001266 3300025925 Bacteria 18342
34 Ga0207659_10000943 3300025926 Bacteria 17372
35 Ga0207691_10003914 3300025940 Bacteria 14465
36 Ga0207679_10006039 3300025945 Bacteria 7630
37 Ga0207651_10048506 3300025960 Bacteria 2871
38 Ga0207677_10003949 3300026023 Bacteria 7895
39 Ga0207703_10003795 3300026035 Bacteria 12561
40 Ga0207676_10000463 3300026095 Bacteria 34064
41 Ga0207428_10000021 3300027907 Bacteria 276436
42 Ga0207428_10084679 3300027907 Bacteria 2470
43 Ga0268266_10005825 3300028379 Bacteria 11403
44 Ga0316576_10212960 3300031727 Unclassified 1454
45 Ga0307410_10168630 3300031852 Bacteria 1647
46 Ga0307407_10075727 3300031903 Bacteria 2019
47 Ga0307409_100055598 3300031995 Bacteria 3057
48 Ga0307416_100303551 3300032002 Bacteria 1588
49 Ga0307411_10043831 3300032005 Bacteria 2865
50 Ga0316593_10023419 3300032168 Bacteria 1948
51 Ga0316592_1010099 3300033524 Bacteria 1898
52 Ga0373937_0109912 3300036401 Bacteria 2563
53 Ga0400483_269824 3300039062 Bacteria 2026
54 Ga0439460_0000285 3300042461 Bacteria 10571
55 Ga0451577_0004733 3300042876 Bacteria 14259
56 Ga0451577_0256324 3300042876 Bacteria 1584
57 Ga0453683_0006237 3300044673 Bacteria 8202
58 Ga0453683_0085031 3300044673 Bacteria 1982
59 Ga0453684_0000100 3300044712 Bacteria 368331
60 Ga0453684_0045906 3300044712 Bacteria 5821
61 Ga0453684_0172645 3300044712 Bacteria 2546
62 Ga0453684_0298593 3300044712 Bacteria 1831
63 Ga0451576_0004829 3300045051 Bacteria 17257
64 Ga0495638_0030588 3300046460 Bacteria 3464
65 Ga0501032_0006589 3300049569 Bacteria 8526
66 Ga0501033_0000802 3300049570 Bacteria 28770
67 Ga0501033_0093472 3300049570 Bacteria 2199
68 Ga0501034_0002881 3300049571 Bacteria 19998
69 Ga0501034_0003112 3300049571 Bacteria 19120
70 Ga0501034_0007961 3300049571 Bacteria 11257
71 Ga0501034_0027973 3300049571 Bacteria 5733
72 Ga0501034_0141384 3300049571 Bacteria 2386
73 Ga0501034_0485417 3300049571 Bacteria 1150
74 Ga0501036_0001038 3300049572 Bacteria 20959
75 Ga0501036_0014386 3300049572 Bacteria 6589
76 Ga0501036_0050851 3300049572 Bacteria 3509
77 Ga0501036_0125332 3300049572 Bacteria 2169
78 Ga0501037_0007964 3300049573 Bacteria 7766
79 Ga0501037_0021411 3300049573 Bacteria 4777
80 Ga0501038_0002085 3300049574 Bacteria 18536
81 Ga0501038_0122446 3300049574 Bacteria 2143
82 Ga0501039_0112035 3300049575 Bacteria 2133
83 Ga0501040_0035322 3300049576 Bacteria 3389
84 Ga0501042_0006517 3300049578 Bacteria 7584
85 Ga0501042_0040220 3300049578 Bacteria 3324
86 Ga0501042_0147541 3300049578 Bacteria 1696
87 Ga0501043_0003614 3300049579 Bacteria 12705
88 Ga0501043_0008493 3300049579 Bacteria 8082
89 Ga0501043_0043983 3300049579 Bacteria 3510
90 Ga0501043_0096070 3300049579 Bacteria 2329
91 Ga0501046_0003974 3300049580 Bacteria 13498
92 Ga0501046_0004140 3300049580 Bacteria 13215
93 Ga0501046_0143056 3300049580 Bacteria 1808
94 Ga0501047_0000611 3300049581 Bacteria 37850
95 Ga0501047_0006398 3300049581 Bacteria 11078
96 Ga0501047_0035099 3300049581 Bacteria 4843
97 Ga0501047_0046574 3300049581 Bacteria 4190
98 Ga0501047_0108574 3300049581 Bacteria 2657
99 Ga0501047_0134699 3300049581 Bacteria 2351
100 Ga0501048_0003752 3300049582 Bacteria 11592
101 Ga0501048_0076608 3300049582 Bacteria 2360
102 Ga0501068_0003166 3300049584 Bacteria 8808
103 Ga0501068_0185046 3300049584 Bacteria 1318
104 Ga0501069_0041459 3300049585 Bacteria 2545
105 Ga0501070_0002294 3300049586 Bacteria 16800
106 Ga0501071_0045937 3300049587 Bacteria 3136
107 Ga0501072_0023533 3300049588 Bacteria 4786
108 Ga0501072_0054933 3300049588 Bacteria 3139
109 Ga0501073_0002819 3300049589 Bacteria 13014
110 Ga0501073_0079161 3300049589 Bacteria 2287
111 Ga0501073_0099230 3300049589 Unclassified 2022
112 Ga0501074_0048659 3300049590 Bacteria 3063
113 Ga0501076_0021775 3300049592 Bacteria 4920
114 Ga0501077_0131181 3300049593 Bacteria 1589
115 Ga0501079_0001320 3300049741 Bacteria 17436
116 Ga0501079_0046820 3300049741 Bacteria 3337
117 Ga0501079_0264775 3300049741 Bacteria 1344
118 Ga0501080_0001598 3300049742 Bacteria 19227
119 Ga0501080_0016467 3300049742 Bacteria 6827
120 Ga0501080_0020295 3300049742 Bacteria 6149
121 Ga0501081_0155293 3300049743 Bacteria 1646
122 Ga0501083_0005297 3300049744 Bacteria 9123
123 Ga0501083_0006060 3300049744 Bacteria 8565
124 Ga0501083_0044618 3300049744 Bacteria 3001
125 Ga0501035_0100895 3300049822 Bacteria 2533
126 Ga0501044_0000696 3300049823 Bacteria 40634
127 Ga0501044_0031092 3300049823 Bacteria 5621
128 Ga0501044_0041116 3300049823 Bacteria 4814
129 Ga0501044_0044364 3300049823 Bacteria 4613
130 Ga0501045_0010775 3300049824 Bacteria 6407
131 Ga0501045_0139778 3300049824 Bacteria 1800
132 nmdc:mga06z11_29479_c1 3300050494 Bacteria 2644
133 nmdc:mga08y16_146839_c1 3300050511 Bacteria 2452
134 nmdc:mga08y16_83457_c1 3300050511 Bacteria 3330
135 nmdc:mga08y16_8_c1 3300050511 Bacteria 571177
136 Ga0500641_0000295 3300053096 Bacteria 18650
137 Ga0501084_0018259 3300054114 Bacteria 5840
138 Ga0501084_0021532 3300054114 Bacteria 5374
139 Ga0501082_0041093 3300060353 Bacteria 3987
140 Ga0501082_0077874 3300060353 Bacteria 2859
141 Ga0501082_0118562 3300060353 Bacteria 2293
142 Ga0501082_0131144 3300060353 Unclassified 2175
143 Ga0501082_0212170 3300060353 Bacteria 1684
144 Ga0530510_0002328 3300061734 Bacteria 13037
145 Ga0530510_0011886 3300061734 Bacteria 6109
146 Ga0530510_0128773 3300061734 Bacteria 1862

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049571 Ga0501034_0485417 Ga0501034_0485417_29_1111 334
2 3300049582 Ga0501048_0076608 Ga0501048_0076608_12_1250 338
3 3300049570 Ga0501033_0093472 Ga0501033_0093472_896_2179 370
4 3300049575 Ga0501039_0112035 Ga0501039_0112035_933_2123 371
5 3300049579 Ga0501043_0003614 Ga0501043_0003614_6542_7984 379
6 3300049581 Ga0501047_0000611 Ga0501047_0000611_25332_26774 379
7 3300049584 Ga0501068_0185046 Ga0501068_0185046_14_1192 379
8 3300054114 Ga0501084_0018259 Ga0501084_0018259_145_1587 379
9 3300049571 Ga0501034_0027973 Ga0501034_0027973_2681_4093 393
10 3300049572 Ga0501036_0050851 Ga0501036_0050851_122_1534 393
11 3300049579 Ga0501043_0043983 Ga0501043_0043983_737_2149 393
12 3300049581 Ga0501047_0046574 Ga0501047_0046574_1142_2554 393
13 3300049822 Ga0501035_0100895 Ga0501035_0100895_506_1918 393
14 3300049823 Ga0501044_0041116 Ga0501044_0041116_1746_3158 393
15 3300049744 Ga0501083_0005297 Ga0501083_0005297_7007_8485 394
16 3300049823 Ga0501044_0044364 Ga0501044_0044364_1620_3032 394
17 3300060353 Ga0501082_0041093 Ga0501082_0041093_2391_3869 394
18 3300049574 Ga0501038_0122446 Ga0501038_0122446_325_1800 395
19 3300049573 Ga0501037_0021411 Ga0501037_0021411_62_1537 396
20 3300049580 Ga0501046_0143056 Ga0501046_0143056_255_1730 396
21 3300049581 Ga0501047_0108574 Ga0501047_0108574_1134_2609 396
22 3300049589 Ga0501073_0079161 Ga0501073_0079161_241_1716 396
23 iso_pu_bacteria 2913912277 2913918836 397
24 3300044673 Ga0453683_0006237 Ga0453683_0006237_1094_2536 398
25 3300045051 Ga0451576_0004829 Ga0451576_0004829_12708_14150 398
26 3300044712 Ga0453684_0172645 Ga0453684_0172645_126_1451 401
27 3300049571 Ga0501034_0003112 Ga0501034_0003112_16651_18126 402
28 3300049579 Ga0501043_0096070 Ga0501043_0096070_471_1946 402
29 3300049580 Ga0501046_0003974 Ga0501046_0003974_7362_8837 402
30 3300049581 Ga0501047_0035099 Ga0501047_0035099_1012_2487 402
31 3300049572 Ga0501036_0125332 Ga0501036_0125332_550_1992 403
32 3300049585 Ga0501069_0041459 Ga0501069_0041459_588_2063 403
33 3300049742 Ga0501080_0020295 Ga0501080_0020295_1017_2459 403
34 3300049823 Ga0501044_0031092 Ga0501044_0031092_3033_4475 403
35 3300049581 Ga0501047_0134699 Ga0501047_0134699_906_2312 409
36 3300049741 Ga0501079_0264775 Ga0501079_0264775_14_1315 409
37 3300044673 Ga0453683_0085031 Ga0453683_0085031_566_1858 410
38 3300032168 Ga0316593_10023419 Ga0316593_100234191 412
39 3300033524 Ga0316592_1010099 Ga0316592_10100991 412
40 3300005985 Ga0081539_10003297 Ga0081539_1000329715 418
41 3300031727 Ga0316576_10212960 Ga0316576_102129601 419
42 3300042876 Ga0451577_0256324 Ga0451577_0256324_222_1547 419
43 3300049572 Ga0501036_0014386 Ga0501036_0014386_764_2068 420
44 3300049578 Ga0501042_0040220 Ga0501042_0040220_31_1335 420
45 3300049587 Ga0501071_0045937 Ga0501071_0045937_645_1949 420
46 3300049588 Ga0501072_0054933 Ga0501072_0054933_1413_2717 420
47 3300049592 Ga0501076_0021775 Ga0501076_0021775_925_2229 420
48 3300049824 Ga0501045_0139778 Ga0501045_0139778_28_1332 420
49 3300060353 Ga0501082_0077874 Ga0501082_0077874_937_2241 420
50 3300009094 Ga0111539_10022973 Ga0111539_100229734 423
51 3300027907 Ga0207428_10084679 Ga0207428_100846793 423
52 3300050511 nmdc:mga08y16_146839_c1 nmdc:mga08y16_146839_c1_35_1528 423
53 3300060353 Ga0501082_0212170 Ga0501082_0212170_52_1401 423
54 3300061734 Ga0530510_0002328 Ga0530510_0002328_12_1379 423
55 3300049569 Ga0501032_0006589 Ga0501032_0006589_1414_2817 424
56 3300049570 Ga0501033_0000802 Ga0501033_0000802_13676_15079 424
57 3300049571 Ga0501034_0007961 Ga0501034_0007961_7780_9183 424
58 3300049572 Ga0501036_0001038 Ga0501036_0001038_13063_14466 424
59 3300049573 Ga0501037_0007964 Ga0501037_0007964_3292_4695 424
60 3300049574 Ga0501038_0002085 Ga0501038_0002085_5834_7237 424
61 3300049579 Ga0501043_0008493 Ga0501043_0008493_5076_6479 424
62 3300049580 Ga0501046_0004140 Ga0501046_0004140_3548_4951 424
63 3300049581 Ga0501047_0006398 Ga0501047_0006398_5582_6985 424
64 3300049582 Ga0501048_0003752 Ga0501048_0003752_1140_2543 424
65 3300049584 Ga0501068_0003166 Ga0501068_0003166_5944_7347 424
66 3300049586 Ga0501070_0002294 Ga0501070_0002294_4551_5954 424
67 3300049589 Ga0501073_0002819 Ga0501073_0002819_681_2084 424
68 3300049741 Ga0501079_0001320 Ga0501079_0001320_7071_8474 424
69 3300049742 Ga0501080_0001598 Ga0501080_0001598_9526_10929 424
70 3300049742 Ga0501080_0016467 Ga0501080_0016467_4757_6238 424
71 3300049744 Ga0501083_0006060 Ga0501083_0006060_4310_5713 424
72 3300049823 Ga0501044_0000696 Ga0501044_0000696_614_2095 424
73 3300049824 Ga0501045_0010775 Ga0501045_0010775_4169_5572 424
74 3300031852 Ga0307410_10168630 Ga0307410_101686302 425
75 3300049578 Ga0501042_0147541 Ga0501042_0147541_268_1674 425
76 3300005548 Ga0070665_100004697 Ga0070665_1000046975 426
77 3300028379 Ga0268266_10005825 Ga0268266_1000582511 426
78 3300044712 Ga0453684_0000100 Ga0453684_0000100_247728_249047 427
79 3300061734 Ga0530510_0128773 Ga0530510_0128773_31_1635 427
80 3300009551 Ga0105238_10000079 Ga0105238_1000007945 428
81 3300025924 Ga0207694_10001932 Ga0207694_100019322 428
82 3300049571 Ga0501034_0141384 Ga0501034_0141384_564_2048 428
83 3300044712 Ga0453684_0298593 Ga0453684_0298593_484_1797 429
84 3300049589 Ga0501073_0099230 Ga0501073_0099230_192_1565 430
85 3300060353 Ga0501082_0131144 Ga0501082_0131144_166_1539 430
86 3300009177 Ga0105248_10002077 Ga0105248_100020772 431
87 3300013306 Ga0163162_10005993 Ga0163162_100059936 431
88 3300044712 Ga0453684_0045906 Ga0453684_0045906_4457_5782 431
89 3300006844 Ga0075428_100000008 Ga0075428_1000000085 432
90 3300009094 Ga0111539_10000015 Ga0111539_10000015203 432
91 3300027907 Ga0207428_10000021 Ga0207428_10000021201 432
92 3300049743 Ga0501081_0155293 Ga0501081_0155293_189_1535 432
93 3300050511 nmdc:mga08y16_8_c1 nmdc:mga08y16_8_c1_318920_320317 432
94 3300005295 Ga0065707_10081999 Ga0065707_1008199916 433
95 3300005353 Ga0070669_100144462 Ga0070669_1001444621 433
96 3300005844 Ga0068862_100018416 Ga0068862_1000184162 433
97 3300049571 Ga0501034_0002881 Ga0501034_0002881_4518_6062 433
98 3300049576 Ga0501040_0035322 Ga0501040_0035322_588_1985 433
99 3300049578 Ga0501042_0006517 Ga0501042_0006517_514_1911 433
100 3300049588 Ga0501072_0023533 Ga0501072_0023533_130_1527 433
101 3300049590 Ga0501074_0048659 Ga0501074_0048659_1221_2618 433
102 3300049593 Ga0501077_0131181 Ga0501077_0131181_125_1522 433
103 3300049741 Ga0501079_0046820 Ga0501079_0046820_419_1816 433
104 3300054114 Ga0501084_0021532 Ga0501084_0021532_1434_2831 433
105 3300060353 Ga0501082_0118562 Ga0501082_0118562_542_1939 433
106 3300031903 Ga0307407_10075727 Ga0307407_100757271 434
107 3300032005 Ga0307411_10043831 Ga0307411_100438311 434
108 3300005354 Ga0070675_100079593 Ga0070675_1000795932 435
109 3300046460 Ga0495638_0030588 Ga0495638_0030588_474_1859 435
110 3300049744 Ga0501083_0044618 Ga0501083_0044618_822_2237 437
111 3300061734 Ga0530510_0011886 Ga0530510_0011886_210_1757 437
112 3300006178 Ga0075367_10027702 Ga0075367_100277024 438
113 3300031995 Ga0307409_100055598 Ga0307409_1000555981 438
114 3300050494 nmdc:mga06z11_29479_c1 nmdc:mga06z11_29479_c1_579_1958 438
115 3300005293 Ga0065715_10000608 Ga0065715_100006082 439
116 3300005333 Ga0070677_10016287 Ga0070677_100162872 440
117 3300009094 Ga0111539_10008738 Ga0111539_100087385 440
118 3300036401 Ga0373937_0109912 Ga0373937_0109912_1136_2542 440
119 3300050511 nmdc:mga08y16_83457_c1 nmdc:mga08y16_83457_c1_542_2116 440
120 3300053096 Ga0500641_0000295 Ga0500641_0000295_2708_4153 440
121 3300009176 Ga0105242_10051294 Ga0105242_100512942 441
122 3300013308 Ga0157375_10045169 Ga0157375_100451693 441
123 3300032002 Ga0307416_100303551 Ga0307416_1003035511 441
124 3300039062 Ga0400483_269824 Ga0400483_269824_527_1900 442
125 iso_pu_bacteria 2913844669 2913849874 442
126 iso_pu_bacteria 2913939268 2913944036 442
127 3300005331 Ga0070670_100017120 Ga0070670_1000171203 443
128 3300005338 Ga0068868_100008809 Ga0068868_1000088094 443
129 3300005344 Ga0070661_100017012 Ga0070661_1000170124 443
130 3300005354 Ga0070675_100000528 Ga0070675_1000005281 443
131 3300005364 Ga0070673_100028064 Ga0070673_1000280642 443
132 3300005543 Ga0070672_100000492 Ga0070672_10000049216 443
133 3300005564 Ga0070664_100013411 Ga0070664_1000134115 443
134 3300005618 Ga0068864_100000266 Ga0068864_10000026617 443
135 3300005842 Ga0068858_100114892 Ga0068858_1001148921 443
136 3300025903 Ga0207680_10010317 Ga0207680_100103171 443
137 3300025925 Ga0207650_10001266 Ga0207650_1000126612 443
138 3300025926 Ga0207659_10000943 Ga0207659_1000094312 443
139 3300025940 Ga0207691_10003914 Ga0207691_100039143 443
140 3300025945 Ga0207679_10006039 Ga0207679_100060394 443
141 3300025960 Ga0207651_10048506 Ga0207651_100485062 443
142 3300026023 Ga0207677_10003949 Ga0207677_100039493 443
143 3300026035 Ga0207703_10003795 Ga0207703_100037956 443
144 3300026095 Ga0207676_10000463 Ga0207676_100004639 443
145 3300042461 Ga0439460_0000285 Ga0439460_0000285_690_2117 443
146 3300042876 Ga0451577_0004733 Ga0451577_0004733_6761_8221 443
147 3300006847 Ga0075431_100041643 Ga0075431_1000416433 444
148 3300009094 Ga0111539_10119186 Ga0111539_101191861 444
149 3300003320 rootH2_10005815 rootH2_100058151 470

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00909

Ammonium_transp

Ammonium Transporter Family

77

494

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
2b2f-assembly1.cif.gz_A ammonium transporter amt-1 from a.fulgidus (native) 0.9383 26 462
2b2f-assembly1.cif.gz_A ammonium transporter amt-1 from a.fulgidus (native) 0.9243 26 462
2nuu-assembly2.cif.gz_D regulating the escherichia coli ammonia channel: the crystal structure of the amtb-glnk complex 0.9226 26 462
2npc-assembly1.cif.gz_A an unusual twin-his arrangement in the pore of ammonia channels is essential for substrate conductance 0.9154 26 444
3c1h-assembly1.cif.gz_A substrate binding, deprotonation and selectivity at the periplasmic entrance of the e. coli ammonia channel amtb 0.914 26 444
ID Description Score Start End Superfamily
2b2hA00 Mainly Alpha;Orthogonal Bundle;Ammonium transporter fold;Ammonium transporter AmtB like domains 0.9307 26 462 1.10.3430.10
af_Q9BLG4_16_459_1.10.3430.10 Mainly Alpha;Orthogonal Bundle;Ammonium transporter fold;Ammonium transporter AmtB like domains 0.9248 26 470 1.10.3430.10
2b2hA00 Mainly Alpha;Orthogonal Bundle;Ammonium transporter fold;Ammonium transporter AmtB like domains 0.9168 26 462 1.10.3430.10
af_A0A1D8PJF2_8_440_1.10.3430.10 Mainly Alpha;Orthogonal Bundle;Ammonium transporter fold;Ammonium transporter AmtB like domains 0.9153 26 462 1.10.3430.10
af_Q4DC59_3_424_1.10.3430.10 Mainly Alpha;Orthogonal Bundle;Ammonium transporter fold;Ammonium transporter AmtB like domains 0.9148 26 462 1.10.3430.10
ID Description Score Start End GO Terms
AF-S7WEI0-F1-model_v4 Ammonium transporter 0.9785 147 467 GO:0008519
GO:0016020
GO:0097272
AF-A0A534V7Y9-F1-model_v4 Ammonium transporter 0.9776 215 393 GO:0008519
GO:0016020
GO:0097272
AF-A0A357I534-F1-model_v4 Ammonium transporter 0.9719 188 470 GO:0008519
GO:0016020
GO:0097272
AF-A0A645E586-F1-model_v4 Ammonium transporter AmtB-like domain-containing protein 0.9696 147 470 GO:0008519
GO:0016020
GO:0097272
AF-A0A7C6EFM3-F1-model_v4 Ammonium transporter 0.9684 22 466 GO:0005886
GO:0008519
GO:0097272

Feature Viewer

pLDDT pTM Quality
87.85 0.89 High
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Predicted Structure (AlphaFold2)

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