F211485

General Info

Members Datasets Scaffolds Average Seq Length
151 110 302 453

Family's Representative Sequence

Representative Sequence 3300009545|Ga0105237_10000155|Ga0105237_1000015583
Length 515
Sequence MGNYTRVAVSAKPGTVWIANDPADEQPRRLFPGAEADTASIQCRPRGRIDDLFEGASFHAPPATGLGPSSMTALLGPDLTPIASTEDLVVYFARGAKAPERWRIGVEQEKVAVYADGGTPPFVGERGIEELLRRMAPEGYEAIREDGHLLALKRASESVTVEPGGQVEFSGPALGTAVACRDSLLAHVNVVSDVARQLGLTFLGVGLRPWGTVEEIPWLPKRRYGVMRDYLPTRGKLAAQMMKRTATVQANLDFDSEPTAVDKMRTALGVTSIVTGLFAASPISEGKPNGYQTFRAAIWLDTDEARCGLLPFAFEEGFGFRQYVEWALDIPMFFVVRRGTYHPAGDFTFRRFMREGFQGERATMGDWETHLSTLFPEVRLKRYIEVRGADAGPMDMAVGLAALWRGLLEDVEARRAAWTLVKNHSFAEREALRREVPRAGLKATLGRRSLQELAQELVAIARQGLLRLPDGDADAALLEPLAARARSGRTAADDMLADYEKAKGDPAALVKRWKL

Samples

Sample ID Description Type Environment
1 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
2 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
18 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
19 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
20 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
21 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
25 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
39 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
40 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
41 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
42 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
43 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
44 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
45 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
46 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
47 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
48 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
49 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
50 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
51 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
52 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
53 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
54 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
55 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
56 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
57 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
58 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
59 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
60 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
61 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
62 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
63 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
64 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
65 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
66 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
67 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
68 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
69 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
70 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
71 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
72 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
73 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
74 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
75 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
76 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
77 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
78 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
79 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
80 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
81 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
82 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
83 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
84 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
85 2558860983 Allorhizobium undicola ATCC 700741 Isolate Rhizoplane
86 2643221568 Rhizobium sp. Root564 Isolate Unclassified
87 2657244999 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
88 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
89 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
90 2802429268 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
91 2837678835 Jiella endophytica CBS5Q-3 Isolate Unclassified
92 2838675328 Agrobacterium radiobacter SEMIA 410 Isolate Nodule
93 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
94 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
95 2838724970 Agrobacterium radiobacter SEMIA 437 Isolate Nodule
96 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
97 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
98 2842130223 Agrobacterium radiobacter SEMIA 441 Isolate Nodule
99 2842152218 Agrobacterium radiobacter SEMIA 457 Isolate Nodule
100 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
101 2842175837 Agrobacterium radiobacter SEMIA 462 Isolate Nodule
102 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
103 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
104 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
105 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
106 2919166419 Agrobacterium cavarae 2074 Isolate Unclassified
107 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
108 2933006813 Rhizobium sp. SEMIA 439 Isolate Unclassified
109 8045864390 Aurantimonas endophytica KCTC 52296 Isolate Unclassified
110 8056875544 Rhizobium halophilum TRM95001 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.12
Metatranscriptomes 0
Isolates 17.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.64
Nodule 9.93
Rhizoplane 0.66
Rhizosphere 71.52
Stem 0
Stem Tuber 0
Unclassified 1.99

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105237_10000155 3300009545 Bacteria 96466
2 JGI25152J39213_1004103 3300002773 Bacteria 4710
3 JGI25152J39213_1004109 3300002773 Bacteria 4703
4 rootH1_10078228 3300003323 Bacteria 2045
5 rootH1_10104042 3300003323 Bacteria 3947
6 rootH1_10104934 3300003323 Bacteria 3205
7 Ga0070658_10000908 3300005327 Bacteria 25367
8 Ga0070670_100000173 3300005331 Bacteria 58127
9 Ga0070689_100000001 3300005340 Bacteria 1334580
10 Ga0070675_100061177 3300005354 Bacteria 3109
11 Ga0070659_100038111 3300005366 Bacteria 3748
12 Ga0070698_100241218 3300005471 Bacteria 1741
13 Ga0070679_100004667 3300005530 Bacteria 12646
14 Ga0068853_100002199 3300005539 Bacteria 14556
15 Ga0070696_100062998 3300005546 Unclassified 2597
16 Ga0068855_100180473 3300005563 Bacteria 2387
17 Ga0068857_100037941 3300005577 Bacteria 4268
18 Ga0068856_100065515 3300005614 Bacteria 3591
19 Ga0068859_100022087 3300005617 Bacteria 6379
20 Ga0068862_100048319 3300005844 Bacteria 3632
21 Ga0068862_100213389 3300005844 Bacteria 1745
22 Ga0075364_10001442 3300006051 Bacteria 12894
23 Ga0075366_10022154 3300006195 Bacteria 3695
24 Ga0075434_100162215 3300006871 Bacteria 2255
25 Ga0097620_100022087 3300006931 Bacteria 6379
26 Ga0099826_10007443 3300006948 Bacteria 8085
27 Ga0105240_10001072 3300009093 Bacteria 48335
28 Ga0105241_10071617 3300009174 Bacteria 2691
29 Ga0105248_10188442 3300009177 Bacteria 2324
30 Ga0105238_10005437 3300009551 Bacteria 12585
31 Ga0105238_10013405 3300009551 Bacteria 8274
32 Ga0207705_10014207 3300025909 Bacteria 5736
33 Ga0207695_10004169 3300025913 Bacteria 19854
34 Ga0207671_10000595 3300025914 Bacteria 48219
35 Ga0207652_10039471 3300025921 Bacteria 4006
36 Ga0207650_10000899 3300025925 Bacteria 22456
37 Ga0207670_10000002 3300025936 Bacteria 783058
38 Ga0207711_10194564 3300025941 Bacteria 1849
39 Ga0207639_10003141 3300026041 Bacteria 11103
40 Ga0207702_10008346 3300026078 Bacteria 8745
41 Ga0207641_10122852 3300026088 Bacteria 2320
42 Ga0207675_100091183 3300026118 Bacteria 2865
43 Ga0207675_100211658 3300026118 Bacteria 1865
44 Ga0209282_1094968 3300027666 Bacteria 1551
45 Ga0265319_1019267 3300028563 Bacteria 2551
46 Ga0265318_10000100 3300028577 Bacteria 80355
47 Ga0265318_10000595 3300028577 Bacteria 25333
48 Ga0265322_10030842 3300028654 Bacteria 1531
49 Ga0265330_10000009 3300031235 Bacteria 190785
50 Ga0265330_10000817 3300031235 Bacteria 19650
51 Ga0265330_10012661 3300031235 Archaea 3940
52 Ga0265332_10000071 3300031238 Bacteria 86362
53 Ga0265332_10008554 3300031238 Bacteria 4600
54 Ga0265332_10032382 3300031238 Unclassified 2278
55 Ga0265328_10001161 3300031239 Bacteria 12144
56 Ga0265328_10016224 3300031239 Unclassified 2901
57 Ga0265320_10000006 3300031240 Bacteria 333442
58 Ga0265320_10000849 3300031240 Bacteria 23058
59 Ga0265329_10001513 3300031242 Bacteria 11123
60 Ga0265329_10004755 3300031242 Bacteria 5587
61 Ga0265329_10007119 3300031242 Bacteria 4356
62 Ga0265331_10000004 3300031250 Bacteria 476985
63 Ga0265331_10000051 3300031250 Bacteria 181262
64 Ga0265331_10002789 3300031250 Bacteria 11585
65 Ga0265331_10011538 3300031250 Bacteria 4834
66 Ga0265316_10002619 3300031344 Bacteria 18551
67 Ga0265316_10003781 3300031344 Bacteria 15215
68 Ga0265316_10013943 3300031344 Bacteria 7107
69 Ga0307513_10088910 3300031456 Bacteria 3156
70 Ga0265313_10000989 3300031595 Bacteria 27931
71 Ga0265313_10007053 3300031595 Bacteria 7774
72 Ga0265313_10012371 3300031595 Bacteria 5216
73 Ga0265314_10000014 3300031711 Bacteria 400363
74 Ga0265314_10000458 3300031711 Bacteria 54444
75 Ga0265314_10000942 3300031711 Bacteria 34243
76 Ga0265314_10080040 3300031711 Bacteria 2158
77 Ga0265342_10002768 3300031712 Bacteria 14866
78 Ga0265342_10003522 3300031712 Bacteria 12805
79 Ga0265342_10005944 3300031712 Bacteria 9183
80 Ga0265342_10036458 3300031712 Bacteria 3004
81 Ga0307413_10015746 3300031824 Bacteria 3884
82 Ga0307410_10005300 3300031852 Bacteria 6808
83 Ga0373926_0015360 3300035083 Bacteria 2609
84 Ga0373934_0032403 3300035086 Bacteria 2050
85 Ga0373927_0000329 3300035695 Bacteria 37272
86 Ga0373927_0006872 3300035695 Bacteria 7734
87 Ga0373947_0064269 3300035725 Bacteria 2237
88 Ga0373925_0035001 3300037068 Bacteria 3703
89 Ga0395905_0000707 3300037471 Bacteria 44289
90 Ga0395905_0003258 3300037471 Bacteria 17455
91 Ga0436361_0341685 3300039447 Bacteria 3301
92 Ga0451577_0014429 3300042876 Bacteria 7367
93 Ga0451577_0126279 3300042876 Bacteria 2292
94 Ga0453684_0002715 3300044712 Bacteria 41943
95 Ga0453684_0003720 3300044712 Bacteria 33767
96 Ga0453684_0006544 3300044712 Bacteria 22065
97 Ga0453684_0013608 3300044712 Bacteria 13184
98 Ga0453684_0030897 3300044712 Bacteria 7551
99 Ga0453684_0042438 3300044712 Bacteria 6131
100 Ga0453684_0053898 3300044712 Bacteria 5245
101 Ga0453684_0237758 3300044712 Bacteria 2099
102 Ga0453684_0257297 3300044712 Bacteria 2002
103 Ga0451576_0034135 3300045051 Bacteria 5403
104 Ga0495638_0000299 3300046460 Bacteria 63971
105 Ga0495638_0004764 3300046460 Bacteria 10235
106 Ga0495650_0024370 3300046471 Bacteria 2859
107 Ga0495606_0003135 3300046507 Bacteria 17932
108 Ga0495616_0039011 3300046513 Bacteria 2435
109 Ga0495631_0001213 3300046518 Bacteria 15912
110 Ga0495587_0101533 3300046536 Bacteria 1657
111 Ga0495604_0026890 3300047317 Bacteria 4578
112 Ga0495686_0000688 3300047472 Bacteria 45757
113 Ga0496116_0000080 3300048919 Bacteria 224530
114 Ga0496121_0000581 3300048924 Bacteria 68614
115 Ga0496122_0054766 3300048925 Bacteria 2992
116 Ga0496123_0040717 3300048926 Bacteria 3231
117 Ga0496124_0000063 3300048927 Bacteria 229705
118 Ga0496126_0000094 3300048929 Bacteria 208184
119 Ga0501045_0074621 3300049824 Bacteria 2498
120 nmdc:mga00v17_133_c2 3300050491 Bacteria 35968
121 Ga0500573_0000491 3300053140 Bacteria 17038
122 Ga0500616_0001529 3300053153 Bacteria 21766
123 Ga0501082_0240263 3300060353 Bacteria 1576
124 Ga0501082_0266983 3300060353 Bacteria 1489
125 2523467976 2523231067 Bacteria 5230452
126 2561467382 2558860983 Bacteria 4133860
127 2643856322 2643221568 Bacteria 5187270
128 2657681959 2657244999 Bacteria 5946535
129 2739350005 2738543031 Bacteria 5769731
130 2776912194 2775507049 Bacteria 6284736
131 2804750977 2802429268 Bacteria 6094027
132 2837682043 2837678835 Bacteria 5252418
133 2838677175 2838675328 Bacteria 4909118
134 2838716063 2838714209 Bacteria 5525906
135 2838720137 2838719591 Bacteria 5523910
136 2838726815 2838724970 Bacteria 4908691
137 2841847071 2841846520 Bacteria 5345850
138 2842126900 2842124991 Bacteria 5346824
139 2842132068 2842130223 Bacteria 4909145
140 2842152763 2842152218 Bacteria 4908957
141 2842172308 2842170452 Bacteria 5525737
142 2842176382 2842175837 Bacteria 4908771
143 2842189170 2842187318 Bacteria 5524014
144 2842213484 2842211629 Bacteria 5523832
145 2842224898 2842224351 Bacteria 5524473
146 2919116266 2919114240 Bacteria 5700270
147 2919166911 2919166419 Bacteria 4952238
148 2926757220 2926754445 Bacteria 5964435
149 2933007408 2933006813 Bacteria 4912075
150 8045866297 8045864390 Bacteria 5043873
151 8056879195 8056875544 Bacteria 4355797
152 Ga0105237_10000155
153 JGI25152J39213_1004103
154 JGI25152J39213_1004109
155 rootH1_10078228
156 rootH1_10104042
157 rootH1_10104934
158 Ga0070658_10000908
159 Ga0070670_100000173
160 Ga0070689_100000001
161 Ga0070675_100061177
162 Ga0070659_100038111
163 Ga0070698_100241218
164 Ga0070679_100004667
165 Ga0068853_100002199
166 Ga0070696_100062998
167 Ga0068855_100180473
168 Ga0068857_100037941
169 Ga0068856_100065515
170 Ga0068859_100022087
171 Ga0068862_100048319
172 Ga0068862_100213389
173 Ga0075364_10001442
174 Ga0075366_10022154
175 Ga0075434_100162215
176 Ga0097620_100022087
177 Ga0099826_10007443
178 Ga0105240_10001072
179 Ga0105241_10071617
180 Ga0105248_10188442
181 Ga0105238_10005437
182 Ga0105238_10013405
183 Ga0207705_10014207
184 Ga0207695_10004169
185 Ga0207671_10000595
186 Ga0207652_10039471
187 Ga0207650_10000899
188 Ga0207670_10000002
189 Ga0207711_10194564
190 Ga0207639_10003141
191 Ga0207702_10008346
192 Ga0207641_10122852
193 Ga0207675_100091183
194 Ga0207675_100211658
195 Ga0209282_1094968
196 Ga0265319_1019267
197 Ga0265318_10000100
198 Ga0265318_10000595
199 Ga0265322_10030842
200 Ga0265330_10000009
201 Ga0265330_10000817
202 Ga0265330_10012661
203 Ga0265332_10000071
204 Ga0265332_10008554
205 Ga0265332_10032382
206 Ga0265328_10001161
207 Ga0265328_10016224
208 Ga0265320_10000006
209 Ga0265320_10000849
210 Ga0265329_10001513
211 Ga0265329_10004755
212 Ga0265329_10007119
213 Ga0265331_10000004
214 Ga0265331_10000051
215 Ga0265331_10002789
216 Ga0265331_10011538
217 Ga0265316_10002619
218 Ga0265316_10003781
219 Ga0265316_10013943
220 Ga0307513_10088910
221 Ga0265313_10000989
222 Ga0265313_10007053
223 Ga0265313_10012371
224 Ga0265314_10000014
225 Ga0265314_10000458
226 Ga0265314_10000942
227 Ga0265314_10080040
228 Ga0265342_10002768
229 Ga0265342_10003522
230 Ga0265342_10005944
231 Ga0265342_10036458
232 Ga0307413_10015746
233 Ga0307410_10005300
234 Ga0373926_0015360
235 Ga0373934_0032403
236 Ga0373927_0000329
237 Ga0373927_0006872
238 Ga0373947_0064269
239 Ga0373925_0035001
240 Ga0395905_0000707
241 Ga0395905_0003258
242 Ga0436361_0341685
243 Ga0451577_0014429
244 Ga0451577_0126279
245 Ga0453684_0002715
246 Ga0453684_0003720
247 Ga0453684_0006544
248 Ga0453684_0013608
249 Ga0453684_0030897
250 Ga0453684_0042438
251 Ga0453684_0053898
252 Ga0453684_0237758
253 Ga0453684_0257297
254 Ga0451576_0034135
255 Ga0495638_0000299
256 Ga0495638_0004764
257 Ga0495650_0024370
258 Ga0495606_0003135
259 Ga0495616_0039011
260 Ga0495631_0001213
261 Ga0495587_0101533
262 Ga0495604_0026890
263 Ga0495686_0000688
264 Ga0496116_0000080
265 Ga0496121_0000581
266 Ga0496122_0054766
267 Ga0496123_0040717
268 Ga0496124_0000063
269 Ga0496126_0000094
270 Ga0501045_0074621
271 nmdc:mga00v17_133_c2
272 Ga0500573_0000491
273 Ga0500616_0001529
274 Ga0501082_0240263
275 Ga0501082_0266983
276 2523467976
277 2561467382
278 2643856322
279 2657681959
280 2739350005
281 2776912194
282 2804750977
283 2837682043
284 2838677175
285 2838716063
286 2838720137
287 2838726815
288 2841847071
289 2842126900
290 2842132068
291 2842152763
292 2842172308
293 2842176382
294 2842189170
295 2842213484
296 2842224898
297 2919116266
298 2919166911
299 2926757220
300 2933007408
301 8045866297
302 8056879195

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04107

GCS2

Glutamate-cysteine ligase family 2(GCS2)

122

425

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
6gmo-assembly2.cif.gz_B plant glutamate cysteine ligase (gcl) in complex with non-reducing gsh (gsm) 0.987 10 457
6gmo-assembly2.cif.gz_B plant glutamate cysteine ligase (gcl) in complex with non-reducing gsh (gsm) 0.9781 10 457
1r8g-assembly1.cif.gz_B structure and function of ybdk 0.7404 25 441
1tt4-assembly1.cif.gz_B structure of np459575, a predicted glutathione synthase from salmonella typhimurium 0.7373 25 455
1r8g-assembly1.cif.gz_A structure and function of ybdk 0.7333 31 441
ID Description Score Start End Superfamily
af_A0A1D6FV28_52_515_3.30.590.20 Alpha Beta;2-Layer Sandwich;Creatine Kinase; Chain A, domain 2; 0.9532 10 457 3.30.590.20
af_A0A1D6FV28_52_515_3.30.590.20 Alpha Beta;2-Layer Sandwich;Creatine Kinase; Chain A, domain 2; 0.9325 10 457 3.30.590.20
af_P9WPK7_9_420_3.30.590.20 Alpha Beta;2-Layer Sandwich;Creatine Kinase; Chain A, domain 2; 0.8739 7 440 3.30.590.20
af_P9WPK7_9_420_3.30.590.20 Alpha Beta;2-Layer Sandwich;Creatine Kinase; Chain A, domain 2; 0.8421 7 440 3.30.590.20
af_P9WPK9_8_375_3.30.590.20 Alpha Beta;2-Layer Sandwich;Creatine Kinase; Chain A, domain 2; 0.8273 32 453 3.30.590.20
ID Description Score Start End GO Terms
AF-A0A7X6IRD0-F1-model_v4 deleted 1 259 399
AF-A0A529HME3-F1-model_v4 deleted 0.9993 120 285
AF-A0A531MGR9-F1-model_v4 glutamate--cysteine ligase (EC 6.3.2.2) 0.9988 99 347 GO:0004357
GO:0005524
GO:0006750
AF-A0A1U9MCY6-F1-model_v4 Glutamate--cysteine ligase (EC 6.3.2.2) 0.9987 1 457 GO:0004357
GO:0005524
GO:0006750
AF-A0A529L6Q0-F1-model_v4 glutamate--cysteine ligase (EC 6.3.2.2) 0.9984 67 346 GO:0004357
GO:0005524
GO:0006750

Map