F211569

General Info

Members Datasets Scaffolds Average Seq Length
151 107 302 339

Family's Representative Sequence

Representative Sequence 3300013104|Ga0157370_10097946|Ga0157370_100979462
Length 350
Sequence LRPGPKVPVAEPSVSVVVPTHQRREMLRRALESLQAQSVEPGSFEVVVATDACSDGSAEMIDAFPANYELRRVEPAGRGRAAACNAAVAAARGEVLIVLDDDMKVVPEFVERHRSHHPPGSRLCVLGAVPVELDPGSPHAARYVKEKFDQHLARLAADPEHIGRPRSFYTGNASLRAETMREAGGFDESFGIYGNEDVELALRLRAAGVGLAYDPAALAHQEYGKDLSGLQRDTLAKGRTTVLLARSHPQVFGDLRLATPDDGSRPWLAARAVLLWLSRRLPAVVTAVFALASLLERLGAWRSPLFYRAVLDFAFWAGVDAALAESEDRGELAKLAGELHHGPIHLLLHR

Samples

Sample ID Description Type Environment
1 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
26 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
27 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
28 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
29 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
30 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
31 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
35 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
36 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
37 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
61 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
62 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
63 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
64 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
65 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
66 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
67 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
68 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
69 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
70 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
71 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
72 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
73 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
74 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
75 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
76 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
77 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
78 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
79 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
80 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
81 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
82 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
83 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
84 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
85 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
86 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
87 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
88 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
89 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
90 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
91 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
92 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
93 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
94 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
95 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
96 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
97 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
98 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
99 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
100 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
101 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
102 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
103 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
104 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
105 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
106 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
107 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.34
Metatranscriptomes 0.66
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 12.58
Rhizosphere 87.42
Stem 0
Stem Tuber 0
Unclassified 3.31

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157370_10097946 3300013104 Bacteria 2751
2 Ga0070658_10030217 3300005327 Bacteria 4354
3 Ga0070683_100000504 3300005329 Bacteria 27405
4 Ga0070680_100078316 3300005336 Bacteria 2723
5 Ga0070682_100000117 3300005337 Bacteria 69662
6 Ga0070660_100193233 3300005339 Bacteria 1649
7 Ga0070689_100043455 3300005340 Bacteria 3454
8 Ga0070661_100000344 3300005344 Bacteria 36955
9 Ga0070668_100193182 3300005347 Bacteria 1668
10 Ga0070688_100001605 3300005365 Bacteria 11318
11 Ga0070688_100002400 3300005365 Bacteria 9459
12 Ga0070688_100062810 3300005365 Bacteria 2352
13 Ga0070659_100026440 3300005366 Bacteria 4467
14 Ga0070667_100408258 3300005367 Bacteria 1237
15 Ga0070713_100000186 3300005436 Bacteria 41000
16 Ga0070678_100003227 3300005456 Bacteria 9057
17 Ga0070681_10008078 3300005458 Bacteria 10296
18 Ga0070685_10000178 3300005466 Bacteria 42333
19 Ga0070685_10002621 3300005466 Bacteria 9214
20 Ga0070679_100000068 3300005530 Bacteria 77184
21 Ga0070684_100007364 3300005535 Bacteria 8556
22 Ga0070684_100188367 3300005535 Bacteria 1877
23 Ga0068854_100000095 3300005578 Bacteria 61892
24 Ga0068852_100000093 3300005616 Bacteria 60834
25 Ga0068852_100072132 3300005616 Bacteria 3034
26 Ga0068851_10000518 3300005834 Bacteria 16893
27 Ga0068863_100030726 3300005841 Bacteria 5129
28 Ga0068863_100343033 3300005841 Bacteria 1453
29 Ga0068862_100249435 3300005844 Bacteria 1617
30 Ga0075431_100050491 3300006847 Bacteria 4289
31 Ga0075433_10000041 3300006852 Bacteria 52354
32 Ga0068865_100001085 3300006881 Bacteria 15698
33 Ga0068865_100172080 3300006881 Bacteria 1661
34 Ga0105245_10000266 3300009098 Bacteria 49944
35 Ga0105245_10000514 3300009098 Bacteria 35475
36 Ga0105241_10282694 3300009174 Bacteria 1418
37 Ga0105248_10000008 3300009177 Bacteria 403910
38 Ga0105249_10000203 3300009553 Bacteria 67783
39 Ga0105249_10150959 3300009553 Bacteria 2237
40 Ga0157371_10047485 3300013102 Bacteria 3053
41 Ga0157369_10000020 3300013105 Bacteria 241679
42 Ga0157372_10001384 3300013307 Bacteria 26176
43 Ga0182008_10002700 3300014497 Bacteria 11015
44 Ga0157379_10002560 3300014968 Bacteria 15253
45 Ga0163161_10000357 3300017792 Bacteria 38514
46 Ga0206353_11386551 3300020082 Bacteria 1967
47 Ga0207656_10006996 3300025321 Bacteria 4094
48 Ga0207705_10032949 3300025909 Bacteria 3703
49 Ga0207707_10037998 3300025912 Bacteria 4206
50 Ga0207657_10121594 3300025919 Bacteria 2148
51 Ga0207649_10000009 3300025920 Bacteria 295544
52 Ga0207652_10000044 3300025921 Bacteria 127779
53 Ga0207687_10000007 3300025927 Bacteria 604185
54 Ga0207687_10000270 3300025927 Bacteria 35439
55 Ga0207700_10000027 3300025928 Bacteria 137708
56 Ga0207690_10016593 3300025932 Bacteria 4485
57 Ga0207704_10000157 3300025938 Bacteria 36439
58 Ga0207711_10000006 3300025941 Bacteria 792692
59 Ga0207661_10000139 3300025944 Bacteria 45892
60 Ga0207661_10003841 3300025944 Bacteria 10474
61 Ga0207712_10000007 3300025961 Bacteria 539589
62 Ga0207712_10220945 3300025961 Bacteria 1514
63 Ga0207668_10163937 3300025972 Bacteria 1735
64 Ga0207640_10000038 3300025981 Bacteria 108630
65 Ga0207677_10000525 3300026023 Bacteria 24518
66 Ga0207639_10040201 3300026041 Bacteria 3489
67 Ga0207639_10286519 3300026041 Unclassified 1451
68 Ga0207641_10025884 3300026088 Bacteria 4839
69 Ga0207641_10258254 3300026088 Bacteria 1630
70 Ga0207648_10009479 3300026089 Bacteria 9321
71 Ga0207698_10000013 3300026142 Bacteria 255414
72 Ga0207698_10047009 3300026142 Bacteria 3265
73 Ga0268266_10000640 3300028379 Bacteria 47545
74 Ga0268265_10262221 3300028380 Bacteria 1537
75 Ga0373937_0059512 3300036401 Bacteria 3511
76 Ga0373937_0179067 3300036401 Bacteria 1990
77 Ga0466957_0004386 3300044842 Bacteria 7849
78 Ga0495603_0002328 3300046455 Bacteria 11153
79 Ga0495629_0000381 3300046459 Bacteria 37177
80 Ga0495653_0145641 3300046463 Bacteria 1660
81 Ga0495582_0000081 3300046473 Bacteria 48557
82 Ga0495662_0092219 3300046476 Bacteria 1477
83 Ga0495606_0000565 3300046507 Bacteria 58752
84 Ga0495608_0000125 3300046511 Bacteria 54881
85 Ga0495608_0003418 3300046511 Bacteria 11370
86 Ga0495628_0049304 3300046516 Bacteria 3335
87 Ga0495630_0000020 3300046517 Bacteria 176389
88 Ga0495630_0000449 3300046517 Bacteria 31127
89 Ga0495630_0031029 3300046517 Bacteria 3978
90 Ga0495630_0175004 3300046517 Bacteria 1636
91 Ga0495640_0010463 3300046533 Bacteria 7166
92 Ga0495634_0038495 3300046642 Bacteria 3261
93 Ga0495635_0000044 3300046663 Bacteria 83945
94 Ga0495588_0036418 3300046674 Bacteria 2496
95 Ga0495657_0000004 3300046675 Bacteria 266465
96 Ga0495647_0000018 3300046681 Bacteria 81701
97 Ga0495647_0005625 3300046681 Bacteria 4117
98 Ga0495658_0000034 3300046683 Bacteria 69176
99 Ga0495669_0000033 3300046684 Bacteria 98629
100 Ga0495613_0000179 3300046689 Bacteria 62109
101 Ga0495624_0000073 3300046690 Bacteria 65582
102 Ga0495624_0000097 3300046690 Bacteria 58715
103 Ga0495624_0091473 3300046690 Unclassified 1877
104 Ga0495624_0249667 3300046690 Bacteria 1073
105 Ga0495670_0004627 3300046691 Bacteria 6749
106 Ga0495649_0003897 3300046694 Bacteria 9870
107 Ga0495604_0000137 3300047317 Bacteria 62542
108 Ga0495674_0000059 3300047319 Bacteria 73353
109 Ga0495676_0025639 3300047321 Bacteria 5088
110 Ga0495676_0050432 3300047321 Bacteria 3338
111 Ga0495680_0001082 3300047322 Bacteria 30201
112 Ga0495680_0001693 3300047322 Bacteria 23412
113 Ga0495680_0060698 3300047322 Bacteria 2913
114 Ga0495680_0346391 3300047322 Unclassified 1035
115 Ga0495675_0000175 3300047444 Bacteria 46609
116 Ga0495593_0055015 3300047673 Unclassified 2096
117 Ga0495593_0095859 3300047673 Bacteria 1525
118 Ga0495593_0197944 3300047673 Unclassified 1010
119 Ga0496100_0000002 3300048903 Bacteria 489057
120 Ga0496101_0000001 3300048904 Bacteria 489057
121 Ga0496102_0000039 3300048905 Bacteria 198306
122 Ga0496102_0373092 3300048905 Bacteria 1343
123 Ga0496103_0000008 3300048906 Bacteria 340474
124 Ga0496106_0000110 3300048909 Bacteria 63946
125 Ga0496107_0000003 3300048910 Bacteria 304038
126 Ga0496108_0000175 3300048911 Bacteria 59373
127 Ga0496109_0000121 3300048912 Bacteria 81487
128 Ga0496109_0000568 3300048912 Bacteria 30898
129 Ga0496110_0000089 3300048913 Bacteria 48723
130 Ga0496111_0000019 3300048914 Bacteria 68278
131 Ga0496111_0311624 3300048914 Bacteria 1166
132 Ga0496112_0007866 3300048915 Bacteria 9493
133 Ga0496112_0181628 3300048915 Bacteria 2068
134 Ga0496113_0000073 3300048916 Bacteria 44302
135 Ga0496113_0006386 3300048916 Bacteria 7464
136 Ga0496114_0001129 3300048917 Bacteria 20185
137 Ga0496114_0291372 3300048917 Bacteria 1440
138 nmdc:mga0n895_317138_c1 3300050512 Bacteria 1580
139 nmdc:mga0a205_24_c2 3300050515 Bacteria 81894
140 nmdc:mga0a205_317742_c1 3300050515 Bacteria 1428
141 Ga0495601_0000013 3300053077 Bacteria 226476
142 Ga0495601_0051671 3300053077 Bacteria 2594
143 Ga0495612_0000060 3300053078 Bacteria 49047
144 Ga0495612_0001740 3300053078 Bacteria 8928
145 Ga0495612_0038422 3300053078 Bacteria 1945
146 Ga0495595_0000003 3300053084 Bacteria 266465
147 Ga0495595_0000053 3300053084 Bacteria 59851
148 Ga0495619_0000031 3300053085 Bacteria 145508
149 Ga0495619_0000257 3300053085 Bacteria 38653
150 Ga0495619_0023407 3300053085 Bacteria 3959
151 Ga0495619_0066992 3300053085 Bacteria 2397
152 Ga0157370_10097946
153 Ga0070658_10030217
154 Ga0070683_100000504
155 Ga0070680_100078316
156 Ga0070682_100000117
157 Ga0070660_100193233
158 Ga0070689_100043455
159 Ga0070661_100000344
160 Ga0070668_100193182
161 Ga0070688_100001605
162 Ga0070688_100002400
163 Ga0070688_100062810
164 Ga0070659_100026440
165 Ga0070667_100408258
166 Ga0070713_100000186
167 Ga0070678_100003227
168 Ga0070681_10008078
169 Ga0070685_10000178
170 Ga0070685_10002621
171 Ga0070679_100000068
172 Ga0070684_100007364
173 Ga0070684_100188367
174 Ga0068854_100000095
175 Ga0068852_100000093
176 Ga0068852_100072132
177 Ga0068851_10000518
178 Ga0068863_100030726
179 Ga0068863_100343033
180 Ga0068862_100249435
181 Ga0075431_100050491
182 Ga0075433_10000041
183 Ga0068865_100001085
184 Ga0068865_100172080
185 Ga0105245_10000266
186 Ga0105245_10000514
187 Ga0105241_10282694
188 Ga0105248_10000008
189 Ga0105249_10000203
190 Ga0105249_10150959
191 Ga0157371_10047485
192 Ga0157369_10000020
193 Ga0157372_10001384
194 Ga0182008_10002700
195 Ga0157379_10002560
196 Ga0163161_10000357
197 Ga0206353_11386551
198 Ga0207656_10006996
199 Ga0207705_10032949
200 Ga0207707_10037998
201 Ga0207657_10121594
202 Ga0207649_10000009
203 Ga0207652_10000044
204 Ga0207687_10000007
205 Ga0207687_10000270
206 Ga0207700_10000027
207 Ga0207690_10016593
208 Ga0207704_10000157
209 Ga0207711_10000006
210 Ga0207661_10000139
211 Ga0207661_10003841
212 Ga0207712_10000007
213 Ga0207712_10220945
214 Ga0207668_10163937
215 Ga0207640_10000038
216 Ga0207677_10000525
217 Ga0207639_10040201
218 Ga0207639_10286519
219 Ga0207641_10025884
220 Ga0207641_10258254
221 Ga0207648_10009479
222 Ga0207698_10000013
223 Ga0207698_10047009
224 Ga0268266_10000640
225 Ga0268265_10262221
226 Ga0373937_0059512
227 Ga0373937_0179067
228 Ga0466957_0004386
229 Ga0495603_0002328
230 Ga0495629_0000381
231 Ga0495653_0145641
232 Ga0495582_0000081
233 Ga0495662_0092219
234 Ga0495606_0000565
235 Ga0495608_0000125
236 Ga0495608_0003418
237 Ga0495628_0049304
238 Ga0495630_0000020
239 Ga0495630_0000449
240 Ga0495630_0031029
241 Ga0495630_0175004
242 Ga0495640_0010463
243 Ga0495634_0038495
244 Ga0495635_0000044
245 Ga0495588_0036418
246 Ga0495657_0000004
247 Ga0495647_0000018
248 Ga0495647_0005625
249 Ga0495658_0000034
250 Ga0495669_0000033
251 Ga0495613_0000179
252 Ga0495624_0000073
253 Ga0495624_0000097
254 Ga0495624_0091473
255 Ga0495624_0249667
256 Ga0495670_0004627
257 Ga0495649_0003897
258 Ga0495604_0000137
259 Ga0495674_0000059
260 Ga0495676_0025639
261 Ga0495676_0050432
262 Ga0495680_0001082
263 Ga0495680_0001693
264 Ga0495680_0060698
265 Ga0495680_0346391
266 Ga0495675_0000175
267 Ga0495593_0055015
268 Ga0495593_0095859
269 Ga0495593_0197944
270 Ga0496100_0000002
271 Ga0496101_0000001
272 Ga0496102_0000039
273 Ga0496102_0373092
274 Ga0496103_0000008
275 Ga0496106_0000110
276 Ga0496107_0000003
277 Ga0496108_0000175
278 Ga0496109_0000121
279 Ga0496109_0000568
280 Ga0496110_0000089
281 Ga0496111_0000019
282 Ga0496111_0311624
283 Ga0496112_0007866
284 Ga0496112_0181628
285 Ga0496113_0000073
286 Ga0496113_0006386
287 Ga0496114_0001129
288 Ga0496114_0291372
289 nmdc:mga0n895_317138_c1
290 nmdc:mga0a205_24_c2
291 nmdc:mga0a205_317742_c1
292 Ga0495601_0000013
293 Ga0495601_0051671
294 Ga0495612_0000060
295 Ga0495612_0001740
296 Ga0495612_0038422
297 Ga0495595_0000003
298 Ga0495595_0000053
299 Ga0495619_0000031
300 Ga0495619_0000257
301 Ga0495619_0023407
302 Ga0495619_0066992

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00535

Glycos_transf_2

Glycosyl transferase family 2

15

163

0.87

PF02709

Glyco_transf_7C

N-terminal domain of galactosyltransferase

150

222

0.86

PF13632

Glyco_trans_2_3

Glycosyl transferase family group 2

95

317

0.84

PF13641

Glyco_tranf_2_3

Glycosyltransferase like family 2

12

240

0.83

PF13506

Glyco_transf_21

Glycosyl transferase family 21

69

235

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ck2-assembly2.cif.gz_B crystal structure of arabidopsis cesa3 catalytic domain with udp-glucose 0.8499 4 54
7ck1-assembly1.cif.gz_A crystal structure of arabidopsis cesa3 catalytic domain 0.8372 3 54
7ck2-assembly1.cif.gz_A crystal structure of arabidopsis cesa3 catalytic domain with udp-glucose 0.8346 3 54
7ck3-assembly2.cif.gz_B crystal structure of arabidopsis cesa3 catalytic domain 0.8254 3 54
6p61-assembly3.cif.gz_C structure of a glycosyltransferase from leptospira borgpetersenii serovar hardjo-bovis (strain jb197) 0.823 3 215
ID Description Score Start End Superfamily
af_P75905_64_287_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8374 1 215 3.90.550.10
2z86A02 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8142 1 217 3.90.550.10
af_Q54EX6_104_387_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8093 161 217 3.90.550.10
af_P9WLV9_5_255_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8011 2 215 3.90.550.10
af_F1QYD0_30_259_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.801 1 215 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A838UX21-F1-model_v4 Glycosyltransferase family 2 protein 0.9784 2 342 GO:0016740
AF-A0A537FMD1-F1-model_v4 Glycosyltransferase family 2 protein 0.8784 7 246 GO:0016757
AF-A0A2V8TCI1-F1-model_v4 Glycosyltransferase 2-like domain-containing protein 0.8749 3 93 GO:0016020
GO:0016757
AF-A0A2T2QXQ3-F1-model_v4 Glycosyltransferase 2-like domain-containing protein 0.8747 3 213 GO:0016020
GO:0016757
AF-A0A1Q7RQ99-F1-model_v4 Glycosyltransferase 2-like domain-containing protein 0.8673 11 328 GO:0016740

Map