F213714

General Info

Members Datasets Scaffolds Average Seq Length
152 123 304 895

Family's Representative Sequence

Representative Sequence 3300005468|Ga0070707_100002063|Ga0070707_1000020634
Length 985
Sequence LRRREASAIMVGGSGALVAERSHRIDSEQVAVNGNEIRRTFLDYFVRQGHRVVRSSSLVPAGDPTLLFTNAGMNQFKDVFLGLERRDYNRATTAQKCVRAGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKREAIAFAWELVTSPNWFALPKDKLYATIFQGEEGIPRDAEAYQHWLGQGVPKQRIYEFGASENFWAMGDTGPCGPCSEIHYDMGPAASDEGHTDCAFGCDCGRYVEIWNLVFMQFLRDASGELQPLPKPSIDTGAGLERLAAVLQGKTSNFDTDLLRPLVEFASELSGKSYGESRETDISLRILADHSRAAAFLVSDGVLPSNEGRGYVLRKIIRRAVRHGRTLGLDRAFLFEMASQVAERMREPYPELLESIARVDAVIKAEEQRYEHTLKLALKKLDEELAGVVSPVVEKEETKRILLQGEAAVSMERYTDTSRLFQMLRTASGESLGEAINRSIALLKDHLGREIILSGEAAFRLYDTYGLSLDLLEDEGSWRGFRVDRAAFERELEKQRERAKASWKGVSKEAASPVYAKLAETFRTEPDFYYGSTARDCRIEAILTRKGPANEIKAGEEAEIVLDRTVFYAEAGGQVADIGSIWNNEHTVQIAQVRGAYYPVPGLIAHRIVAKESLRVGDRVALEADGARREHIKRNHTATHLMHAALRNILGTHVKQAGSLVAPDYLRFDFTHFVSVDADELREIEQQVNEEILLNAEVETSVTTLDEALSSGALAFFGDKYPDQNVRVVTIPDPAAPRGFYSKELCGGTHVRRSGDIGVFKIMGEQSVAAGIRRVEAITGARALADYQQALATLRRLATMLNVGEDALPAAVERLMLATRQMEKQLDALKRKSAYSHLDELLEQVRTVKDVRVLAARVQEMDRDAMRQLVDTLRQKLGSGVVVLGTAENGKVTLISGVTKDLISRLHAGKIVQAVAQEVGGSGGGRPDLAEAGGKDTSALEKAIEGVYAIVERML

Samples

Sample ID Description Type Environment
1 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
2 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
3 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
4 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
8 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
9 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
14 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
15 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
16 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
25 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
28 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
29 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
31 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
34 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
37 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
38 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
39 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
40 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
41 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
42 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
43 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
63 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
67 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
68 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
69 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
70 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
71 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
72 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
73 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
74 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
75 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
76 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
77 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
78 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
79 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
80 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
81 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
82 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
83 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
84 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
85 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
86 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
87 3300044663 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA2E_TR Metagenome Unclassified
88 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
89 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
90 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
91 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
92 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
93 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
94 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
95 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
96 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
97 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
98 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
99 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
100 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
101 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
102 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
103 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
104 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
105 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
106 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
107 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
108 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
109 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
110 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
111 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
112 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
116 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
117 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
118 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
119 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
120 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
121 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
122 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
123 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.37
Metatranscriptomes 1.97
Isolates 0.66

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.66
Nodule 0
Rhizoplane 2.63
Rhizosphere 92.11
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070707_100002063 3300005468 Bacteria 19258
2 Ga0068869_100005369 3300005334 Bacteria 8054
3 Ga0070661_100001790 3300005344 Bacteria 14900
4 Ga0070675_100000744 3300005354 Bacteria 22671
5 Ga0070671_100000582 3300005355 Bacteria 25999
6 Ga0070713_100015051 3300005436 Bacteria 5763
7 Ga0070701_10001393 3300005438 Bacteria 8943
8 Ga0070705_100004403 3300005440 Bacteria 6860
9 Ga0070700_100016097 3300005441 Bacteria 4254
10 Ga0070708_100000342 3300005445 Bacteria 35133
11 Ga0070708_100014000 3300005445 Bacteria 6590
12 Ga0070662_100000894 3300005457 Bacteria 18244
13 Ga0070707_100000151 3300005468 Bacteria 67008
14 Ga0070698_100011973 3300005471 Bacteria 9202
15 Ga0070697_100000369 3300005536 Bacteria 35090
16 Ga0070697_100016906 3300005536 Bacteria 5736
17 Ga0070697_100018045 3300005536 Bacteria 5560
18 Ga0070695_100013309 3300005545 Bacteria 4942
19 Ga0070696_100001181 3300005546 Bacteria 16914
20 Ga0070693_100000032 3300005547 Bacteria 52928
21 Ga0070665_100019820 3300005548 Bacteria 6752
22 Ga0070665_100026009 3300005548 Bacteria 5895
23 Ga0070665_100069274 3300005548 Bacteria 3536
24 Ga0070664_100011615 3300005564 Bacteria 7145
25 Ga0068856_100000265 3300005614 Bacteria 56919
26 Ga0068859_100001338 3300005617 Bacteria 25181
27 Ga0068863_100005169 3300005841 Bacteria 12871
28 Ga0068860_100005949 3300005843 Bacteria 12273
29 Ga0068862_100001029 3300005844 Bacteria 26800
30 Ga0068862_100045666 3300005844 Bacteria 3737
31 Ga0070716_100002356 3300006173 Bacteria 8690
32 Ga0070712_100019709 3300006175 Bacteria 4404
33 Ga0075431_100002534 3300006847 Bacteria 17618
34 Ga0075434_100000423 3300006871 Bacteria 31288
35 Ga0075434_100008649 3300006871 Bacteria 9480
36 Ga0075436_100000958 3300006914 Bacteria 19345
37 Ga0075436_100006652 3300006914 Bacteria 7918
38 Ga0097620_100001338 3300006931 Bacteria 25181
39 Ga0075435_100001168 3300007076 Bacteria 16768
40 Ga0099794_10009868 3300007265 Bacteria 4035
41 Ga0099794_10017174 3300007265 Bacteria 3221
42 Ga0105245_10000013 3300009098 Bacteria 266248
43 Ga0105245_10005534 3300009098 Bacteria 11095
44 Ga0157373_10000321 3300013100 Bacteria 38735
45 Ga0157371_10000470 3300013102 Bacteria 49205
46 Ga0157369_10050890 3300013105 Bacteria 4484
47 Ga0157374_10019874 3300013296 Bacteria 5952
48 Ga0157378_10000129 3300013297 Bacteria 73260
49 Ga0157378_10000649 3300013297 Bacteria 32727
50 Ga0157372_10003708 3300013307 Bacteria 16414
51 Ga0157375_10000004 3300013308 Bacteria 474935
52 Ga0157376_10000038 3300014969 Bacteria 134733
53 Ga0157376_10000859 3300014969 Bacteria 19926
54 Ga0213873_10000002 3300021358 Bacteria 1164195
55 Ga0213876_10000001 3300021384 Bacteria 1186326
56 Ga0207655_1020373 3300025728 Bacteria 3411
57 Ga0207684_10017350 3300025910 Bacteria 6175
58 Ga0207649_10005846 3300025920 Bacteria 6664
59 Ga0207646_10000019 3300025922 Bacteria 282855
60 Ga0207646_10000039 3300025922 Bacteria 188453
61 Ga0207646_10001051 3300025922 Bacteria 35154
62 Ga0207687_10000014 3300025927 Bacteria 297704
63 Ga0207687_10001253 3300025927 Bacteria 17350
64 Ga0207644_10004865 3300025931 Bacteria 8746
65 Ga0207690_10000395 3300025932 Bacteria 28806
66 Ga0207706_10000002 3300025933 Bacteria 360309
67 Ga0207665_10003822 3300025939 Bacteria 10064
68 Ga0207689_10007788 3300025942 Bacteria 9371
69 Ga0207667_10032904 3300025949 Bacteria 5580
70 Ga0207668_10000003 3300025972 Bacteria 206959
71 Ga0207640_10008135 3300025981 Bacteria 5808
72 Ga0207678_10024748 3300026067 Bacteria 5242
73 Ga0207708_10025514 3300026075 Bacteria 4472
74 Ga0207702_10000810 3300026078 Bacteria 33176
75 Ga0207641_10003035 3300026088 Bacteria 15127
76 Ga0207648_10058344 3300026089 Bacteria 3366
77 Ga0209588_1003717 3300027671 Bacteria 4247
78 Ga0265354_1000243 3300028016 Bacteria 9877
79 Ga0268266_10000221 3300028379 Bacteria 99332
80 Ga0268266_10076024 3300028379 Bacteria 2918
81 Ga0268265_10001857 3300028380 Bacteria 16839
82 Ga0268264_10011928 3300028381 Bacteria 7157
83 Ga0307511_10002913 3300030521 Bacteria 17719
84 Ga0265770_1000886 3300030878 Bacteria 4151
85 Ga0265760_10000003 3300031090 Bacteria 152662
86 Ga0265760_10001583 3300031090 Bacteria 6709
87 Ga0265325_10000376 3300031241 Bacteria 31396
88 Ga0265325_10002218 3300031241 Bacteria 13187
89 Ga0265327_10002740 3300031251 Bacteria 17939
90 Ga0265316_10002788 3300031344 Bacteria 17910
91 Ga0265316_10031375 3300031344 Bacteria 4346
92 Ga0307408_100009192 3300031548 Bacteria 6517
93 Ga0265342_10000241 3300031712 Bacteria 61465
94 Ga0316212_1000231 3300033547 Bacteria 6477
95 Ga0373926_0003700 3300035083 Bacteria 4971
96 Ga0373934_0002519 3300035086 Bacteria 6737
97 Ga0373954_0003149 3300035118 Bacteria 6974
98 Ga0373927_0000078 3300035695 Bacteria 71963
99 Ga0373927_0017148 3300035695 Bacteria 4772
100 Ga0373933_0004710 3300035724 Bacteria 7467
101 Ga0373947_0002376 3300035725 Bacteria 11374
102 Ga0373937_0005239 3300036401 Bacteria 11075
103 Ga0373937_0008898 3300036401 Bacteria 8717
104 Ga0373925_0000127 3300037068 Bacteria 82229
105 Ga0400489_68752 3300039093 Bacteria 11983
106 Ga0436365_0349719 3300039437 Bacteria 5417
107 Ga0436365_0447799 3300039437 Bacteria 61454
108 Ga0436361_0466567 3300039447 Bacteria 20890
109 Ga0436362_0660519 3300039453 Bacteria 832172
110 Ga0466989_0019418 3300044663 Bacteria 3896
111 Ga0453683_0001517 3300044673 Bacteria 19821
112 Ga0453684_0024265 3300044712 Bacteria 8872
113 Ga0451576_0034581 3300045051 Bacteria 5366
114 Ga0495653_0009359 3300046463 Bacteria 8016
115 Ga0495582_0006825 3300046473 Bacteria 6350
116 Ga0495594_0008642 3300046499 Bacteria 5247
117 Ga0495594_0010850 3300046499 Bacteria 4732
118 Ga0495628_0000914 3300046516 Bacteria 27108
119 Ga0495628_0011703 3300046516 Bacteria 7410
120 Ga0495630_0039781 3300046517 Bacteria 3515
121 Ga0495666_0024041 3300046526 Bacteria 3013
122 Ga0495587_0004741 3300046536 Bacteria 8926
123 Ga0495667_0007457 3300046559 Bacteria 7415
124 Ga0495657_0034873 3300046675 Bacteria 3492
125 Ga0495599_0021665 3300046678 Bacteria 4010
126 Ga0495623_0015770 3300046679 Bacteria 4884
127 Ga0495658_0004852 3300046683 Bacteria 6598
128 Ga0495604_0000316 3300047317 Bacteria 43437
129 Ga0495604_0001009 3300047317 Bacteria 23438
130 Ga0495675_0000001 3300047444 Bacteria 231230
131 Ga0495684_0007894 3300047471 Bacteria 8231
132 Ga0495684_0008624 3300047471 Bacteria 7890
133 Ga0495602_0000541 3300048088 Bacteria 35231
134 Ga0495614_0006236 3300048089 Bacteria 5360
135 Ga0496101_0056254 3300048904 Bacteria 2844
136 Ga0496102_0001095 3300048905 Bacteria 25074
137 Ga0496106_0000553 3300048909 Bacteria 26612
138 Ga0496107_0003681 3300048910 Bacteria 10304
139 Ga0501032_0023487 3300049569 Bacteria 4259
140 Ga0501036_0030774 3300049572 Bacteria 4535
141 Ga0501047_0014447 3300049581 Bacteria 7509
142 Ga0501073_0010271 3300049589 Bacteria 6875
143 Ga0501257_000554 3300049686 Bacteria 7412
144 nmdc:mga0n895_36913_c1 3300050512 Bacteria 4722
145 nmdc:mga0n895_517_c1 3300050512 Bacteria 26235
146 nmdc:mga0rr50_223_c1 3300050513 Bacteria 30579
147 nmdc:mga08x19_1413_c1 3300050514 Bacteria 14841
148 nmdc:mga08x19_250_c1 3300050514 Bacteria 40812
149 nmdc:mga0a205_33783_c1 3300050515 Bacteria 4905
150 Ga0500555_000833 3300053103 Bacteria 11011
151 Ga0466962_0009792 3300061719 Bacteria 4598
152 2852679343 2852677369 Bacteria 3768884
153 Ga0070707_100002063
154 Ga0068869_100005369
155 Ga0070661_100001790
156 Ga0070675_100000744
157 Ga0070671_100000582
158 Ga0070713_100015051
159 Ga0070701_10001393
160 Ga0070705_100004403
161 Ga0070700_100016097
162 Ga0070708_100000342
163 Ga0070708_100014000
164 Ga0070662_100000894
165 Ga0070707_100000151
166 Ga0070698_100011973
167 Ga0070697_100000369
168 Ga0070697_100016906
169 Ga0070697_100018045
170 Ga0070695_100013309
171 Ga0070696_100001181
172 Ga0070693_100000032
173 Ga0070665_100019820
174 Ga0070665_100026009
175 Ga0070665_100069274
176 Ga0070664_100011615
177 Ga0068856_100000265
178 Ga0068859_100001338
179 Ga0068863_100005169
180 Ga0068860_100005949
181 Ga0068862_100001029
182 Ga0068862_100045666
183 Ga0070716_100002356
184 Ga0070712_100019709
185 Ga0075431_100002534
186 Ga0075434_100000423
187 Ga0075434_100008649
188 Ga0075436_100000958
189 Ga0075436_100006652
190 Ga0097620_100001338
191 Ga0075435_100001168
192 Ga0099794_10009868
193 Ga0099794_10017174
194 Ga0105245_10000013
195 Ga0105245_10005534
196 Ga0157373_10000321
197 Ga0157371_10000470
198 Ga0157369_10050890
199 Ga0157374_10019874
200 Ga0157378_10000129
201 Ga0157378_10000649
202 Ga0157372_10003708
203 Ga0157375_10000004
204 Ga0157376_10000038
205 Ga0157376_10000859
206 Ga0213873_10000002
207 Ga0213876_10000001
208 Ga0207655_1020373
209 Ga0207684_10017350
210 Ga0207649_10005846
211 Ga0207646_10000019
212 Ga0207646_10000039
213 Ga0207646_10001051
214 Ga0207687_10000014
215 Ga0207687_10001253
216 Ga0207644_10004865
217 Ga0207690_10000395
218 Ga0207706_10000002
219 Ga0207665_10003822
220 Ga0207689_10007788
221 Ga0207667_10032904
222 Ga0207668_10000003
223 Ga0207640_10008135
224 Ga0207678_10024748
225 Ga0207708_10025514
226 Ga0207702_10000810
227 Ga0207641_10003035
228 Ga0207648_10058344
229 Ga0209588_1003717
230 Ga0265354_1000243
231 Ga0268266_10000221
232 Ga0268266_10076024
233 Ga0268265_10001857
234 Ga0268264_10011928
235 Ga0307511_10002913
236 Ga0265770_1000886
237 Ga0265760_10000003
238 Ga0265760_10001583
239 Ga0265325_10000376
240 Ga0265325_10002218
241 Ga0265327_10002740
242 Ga0265316_10002788
243 Ga0265316_10031375
244 Ga0307408_100009192
245 Ga0265342_10000241
246 Ga0316212_1000231
247 Ga0373926_0003700
248 Ga0373934_0002519
249 Ga0373954_0003149
250 Ga0373927_0000078
251 Ga0373927_0017148
252 Ga0373933_0004710
253 Ga0373947_0002376
254 Ga0373937_0005239
255 Ga0373937_0008898
256 Ga0373925_0000127
257 Ga0400489_68752
258 Ga0436365_0349719
259 Ga0436365_0447799
260 Ga0436361_0466567
261 Ga0436362_0660519
262 Ga0466989_0019418
263 Ga0453683_0001517
264 Ga0453684_0024265
265 Ga0451576_0034581
266 Ga0495653_0009359
267 Ga0495582_0006825
268 Ga0495594_0008642
269 Ga0495594_0010850
270 Ga0495628_0000914
271 Ga0495628_0011703
272 Ga0495630_0039781
273 Ga0495666_0024041
274 Ga0495587_0004741
275 Ga0495667_0007457
276 Ga0495657_0034873
277 Ga0495599_0021665
278 Ga0495623_0015770
279 Ga0495658_0004852
280 Ga0495604_0000316
281 Ga0495604_0001009
282 Ga0495675_0000001
283 Ga0495684_0007894
284 Ga0495684_0008624
285 Ga0495602_0000541
286 Ga0495614_0006236
287 Ga0496101_0056254
288 Ga0496102_0001095
289 Ga0496106_0000553
290 Ga0496107_0003681
291 Ga0501032_0023487
292 Ga0501036_0030774
293 Ga0501047_0014447
294 Ga0501073_0010271
295 Ga0501257_000554
296 nmdc:mga0n895_36913_c1
297 nmdc:mga0n895_517_c1
298 nmdc:mga0rr50_223_c1
299 nmdc:mga08x19_1413_c1
300 nmdc:mga08x19_250_c1
301 nmdc:mga0a205_33783_c1
302 Ga0500555_000833
303 Ga0466962_0009792
304 2852679343

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07973

tRNA_SAD

Threonyl and Alanyl tRNA synthetase second additional domain

756

806

0.98

PF01411

tRNA-synt_2c

tRNA synthetases class II (A)

36

432

0.97

PF02272

DHHA1

DHHA1 domain

842

981

0.96

PF01411

tRNA-synt_2c

tRNA synthetases class II (A)

456

658

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
4xeo-assembly1.cif.gz_A crystal structure of human alars catalytic domain with r329h mutation 0.9568 1 368
5v59-assembly1.cif.gz_A crystal structure of catalytic fragment of human alars in complex with aze-sa 0.9529 1 364
4xem-assembly1.cif.gz_A crystal structure of wild type human alars catalytic domain 0.9483 1 364
4xeo-assembly2.cif.gz_B crystal structure of human alars catalytic domain with r329h mutation 0.9466 2 365
5knn-assembly3.cif.gz_C evolutionary gain of alanine mischarging to non-cognate trnas with a g4:u69 base pair 0.9453 1 428
ID Description Score Start End Superfamily
af_P00957_459_552_2.40.30.130 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9702 460 553 2.40.30.130
af_P40825_614_789_3.30.980.10 Alpha Beta;2-Layer Sandwich;Threonyl-tRNA Synthetase; Chain A, domain 2;Threonyl-trna Synthetase; Chain A, domain 2 0.9605 554 706 3.30.980.10
af_Q2FXV9_444_553_2.40.30.130 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9587 452 553 2.40.30.130
af_I1K6W0_532_646_2.40.30.130 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9587 448 553 2.40.30.130
af_P00957_764_873_3.10.310.40 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1; 0.9579 751 858 3.10.310.40
ID Description Score Start End GO Terms
AF-A0A7X5N2T7-F1-model_v4 Alanine--tRNA ligase 0.9796 590 703 GO:0002161
GO:0003723
GO:0004813
GO:0005524
GO:0005829
GO:0006419
GO:0045892
GO:0046872
AF-A0A2C6M9X0-F1-model_v4 DHHA1 domain-containing protein 0.9756 751 859 GO:0002161
GO:0003723
GO:0004813
GO:0005524
GO:0005829
GO:0006419
AF-A0A534UVZ7-F1-model_v4 Alanine--tRNA ligase 0.975 756 855 GO:0003676
GO:0016874
AF-A0A0G1E8E3-F1-model_v4 Alanine-tRNA ligase 0.9725 578 696 GO:0002161
GO:0003723
GO:0004813
GO:0005524
GO:0006419
AF-A0A0G0LBU3-F1-model_v4 Alanine-tRNA ligase 0.9724 569 696 GO:0002161
GO:0003723
GO:0004813
GO:0005524
GO:0005829
GO:0006419

Map