F213948

General Info

Members Datasets Scaffolds Average Seq Length
152 104 152 224

Family's Representative Sequence

Representative Sequence 3300006038|Ga0075365_10170410|Ga0075365_101704102
Length 247
Sequence MSRLPIPGLRRQKHSHWQVIKSDKATLALAASTLAIAGAVLVAQYGRLLNRRTHEQISGDHAVAQPADVLNAAPAAAVDTVNVAVEGFGTASRSELILFNLLAGFLGSFASVRLTTWMIKDNRGPFRNVKVGGRHIHHFIPGILLAFASGIAALLVRGQAGDKRIAVSMGVGMGLTFDEAALLLDMRDVYWTREGLLSVQLSMGTVATLGITILTLRILGRGERHQEEAGEIPKIDGTLAVPAHQNP

Samples

Sample ID Description Type Environment
1 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
4 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
5 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
6 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
7 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
8 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
9 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
10 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
11 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
12 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
13 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
14 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
15 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
16 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
17 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
20 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
26 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
27 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
30 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
31 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
32 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
33 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
34 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
55 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
56 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
57 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
58 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
59 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
60 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
61 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
62 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
63 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
64 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
65 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
66 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
67 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
68 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
69 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
70 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
71 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
72 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
73 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
74 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
75 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
76 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
77 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
78 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
79 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
80 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
81 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
82 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
83 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
84 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
85 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
86 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
87 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
88 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
89 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
90 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
91 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
93 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
94 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
95 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
96 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
97 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
98 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
99 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
100 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
101 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
102 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
103 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
104 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.26
Nodule 0
Rhizoplane 17.76
Rhizosphere 76.32
Stem 0
Stem Tuber 0
Unclassified 0.66

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070677_10000031 3300005333 Bacteria 41799
2 Ga0070680_100030244 3300005336 Bacteria 4351
3 Ga0070713_100000091 3300005436 Bacteria 57496
4 Ga0070681_10024687 3300005458 Bacteria 6048
5 Ga0070679_100005814 3300005530 Bacteria 11445
6 Ga0070684_100059452 3300005535 Bacteria 3341
7 Ga0070684_100188639 3300005535 Bacteria 1876
8 Ga0070665_100000120 3300005548 Bacteria 148340
9 Ga0070704_100430871 3300005549 Bacteria 1131
10 Ga0068857_100324999 3300005577 Bacteria 1421
11 Ga0068854_100006789 3300005578 Bacteria 7295
12 Ga0070702_100099867 3300005615 Bacteria 1778
13 Ga0068866_10082222 3300005718 Unclassified 1732
14 Ga0068863_100627431 3300005841 Bacteria 1065
15 Ga0068858_100000035 3300005842 Bacteria 140466
16 Ga0068860_100252551 3300005843 Bacteria 1718
17 Ga0081455_10009325 3300005937 Bacteria 10102
18 Ga0081455_10059771 3300005937 Bacteria 3216
19 Ga0081455_10104307 3300005937 Bacteria 2268
20 Ga0081455_10221635 3300005937 Bacteria 1401
21 Ga0081538_10060190 3300005981 Bacteria 2187
22 Ga0081539_10000872 3300005985 Bacteria 57857
23 Ga0075365_10049507 3300006038 Bacteria 2769
24 Ga0075365_10170410 3300006038 Bacteria 1519
25 Ga0075363_100083572 3300006048 Bacteria 1749
26 Ga0075364_10189562 3300006051 Bacteria 1392
27 Ga0075428_100114585 3300006844 Bacteria 2937
28 Ga0075430_100022693 3300006846 Bacteria 5339
29 Ga0075430_100026601 3300006846 Bacteria 4919
30 Ga0075431_100012215 3300006847 Bacteria 8668
31 Ga0075433_10000058 3300006852 Bacteria 48106
32 Ga0105245_10000053 3300009098 Bacteria 125678
33 Ga0105245_10001840 3300009098 Bacteria 19302
34 Ga0105242_10000017 3300009176 Bacteria 122190
35 Ga0105242_10001012 3300009176 Bacteria 22084
36 Ga0105249_10000095 3300009553 Bacteria 121300
37 Ga0157370_10295448 3300013104 Bacteria 1496
38 Ga0157378_10012400 3300013297 Bacteria 7462
39 Ga0157378_10126059 3300013297 Bacteria 2365
40 Ga0157375_10000076 3300013308 Bacteria 101715
41 Ga0157377_10069672 3300014745 Bacteria 2030
42 Ga0157379_10007617 3300014968 Bacteria 9372
43 Ga0207682_10000067 3300025893 Bacteria 45608
44 Ga0207642_10061080 3300025899 Unclassified 1751
45 Ga0207707_10046001 3300025912 Bacteria 3801
46 Ga0207660_10032130 3300025917 Bacteria 3621
47 Ga0207652_10000177 3300025921 Bacteria 67555
48 Ga0207694_10000067 3300025924 Bacteria 128108
49 Ga0207687_10000021 3300025927 Bacteria 226396
50 Ga0207687_10001766 3300025927 Bacteria 14871
51 Ga0207700_10000009 3300025928 Bacteria 314953
52 Ga0207664_10181802 3300025929 Bacteria 1806
53 Ga0207686_10000016 3300025934 Bacteria 198779
54 Ga0207686_10000029 3300025934 Bacteria 160239
55 Ga0207686_10000414 3300025934 Bacteria 29497
56 Ga0207669_10169726 3300025937 Bacteria 1551
57 Ga0207661_10012321 3300025944 Bacteria 6212
58 Ga0207661_10107371 3300025944 Bacteria 2355
59 Ga0207712_10000003 3300025961 Bacteria 615314
60 Ga0207640_10004721 3300025981 Bacteria 7400
61 Ga0207703_10009202 3300026035 Bacteria 7768
62 Ga0207702_10186670 3300026078 Bacteria 1912
63 Ga0207641_10115860 3300026088 Bacteria 2383
64 Ga0207675_100018763 3300026118 Bacteria 6455
65 Ga0207675_100113909 3300026118 Bacteria 2553
66 Ga0268266_10000023 3300028379 Bacteria 501899
67 Ga0268266_10449094 3300028379 Bacteria 1225
68 Ga0268264_10551937 3300028381 Bacteria 1130
69 Ga0307415_100003452 3300032126 Bacteria 8047
70 Ga0373937_0159974 3300036401 Bacteria 2111
71 Ga0395900_0113811 3300037418 Bacteria 2777
72 Ga0395900_0871885 3300037418 Bacteria 825
73 Ga0395898_0150879 3300037466 Bacteria 2224
74 Ga0395901_0285194 3300038443 Bacteria 1715
75 Ga0395901_0428061 3300038443 Bacteria 1356
76 Ga0466960_0002331 3300044901 Bacteria 7131
77 Ga0495603_0000693 3300046455 Bacteria 19116
78 Ga0495603_0159241 3300046455 Bacteria 1310
79 Ga0495629_0001322 3300046459 Bacteria 19483
80 Ga0495629_0014106 3300046459 Bacteria 5757
81 Ga0495629_0015740 3300046459 Bacteria 5430
82 Ga0495653_0055322 3300046463 Bacteria 3028
83 Ga0495653_0238626 3300046463 Bacteria 1213
84 Ga0495620_0000119 3300046515 Bacteria 63487
85 Ga0495628_0001242 3300046516 Bacteria 23320
86 Ga0495628_0029800 3300046516 Bacteria 4422
87 Ga0495628_0095662 3300046516 Bacteria 2295
88 Ga0495628_0288763 3300046516 Bacteria 1216
89 Ga0495652_0000086 3300046529 Bacteria 99373
90 Ga0495652_0022187 3300046529 Bacteria 5637
91 Ga0495586_0101361 3300046535 Bacteria 1598
92 Ga0495645_0019287 3300046543 Bacteria 4910
93 Ga0495634_0000982 3300046642 Bacteria 26859
94 Ga0495634_0017546 3300046642 Bacteria 5105
95 Ga0495634_0129485 3300046642 Bacteria 1610
96 Ga0495625_0000020 3300046660 Bacteria 290440
97 Ga0495599_0024100 3300046678 Bacteria 3806
98 Ga0495658_0005597 3300046683 Bacteria 6173
99 Ga0495613_0000298 3300046689 Bacteria 44864
100 Ga0495676_0000252 3300047321 Bacteria 43212
101 Ga0495676_0000421 3300047321 Bacteria 34287
102 Ga0495680_0105104 3300047322 Bacteria 2100
103 Ga0495679_015230 3300047446 Bacteria 2819
104 Ga0495602_0014974 3300048088 Bacteria 7844
105 Ga0496100_0000003 3300048903 Bacteria 360802
106 Ga0496100_0000008 3300048903 Bacteria 231974
107 Ga0496101_0000003 3300048904 Bacteria 406565
108 Ga0496101_0000016 3300048904 Bacteria 240753
109 Ga0496104_0000002 3300048907 Bacteria 686017
110 Ga0496104_0000003 3300048907 Bacteria 669219
111 Ga0496104_0001032 3300048907 Bacteria 23833
112 Ga0496104_0656572 3300048907 Unclassified 958
113 Ga0496105_0000001 3300048908 Bacteria 1328178
114 Ga0496105_0000031 3300048908 Bacteria 137220
115 Ga0496105_0007238 3300048908 Bacteria 8570
116 Ga0496106_0000048 3300048909 Bacteria 98233
117 Ga0496106_0000052 3300048909 Bacteria 94849
118 Ga0496106_0000086 3300048909 Bacteria 73933
119 Ga0496107_0000008 3300048910 Bacteria 251874
120 Ga0496107_0000009 3300048910 Bacteria 231682
121 Ga0496107_0052335 3300048910 Bacteria 2945
122 Ga0496108_0000002 3300048911 Bacteria 700890
123 Ga0496108_0000153 3300048911 Bacteria 66080
124 Ga0496109_0000001 3300048912 Bacteria 700852
125 Ga0496109_0000300 3300048912 Bacteria 46637
126 Ga0496109_0241566 3300048912 Bacteria 1700
127 Ga0496110_0060815 3300048913 Bacteria 3332
128 Ga0496111_0003563 3300048914 Bacteria 9640
129 Ga0496113_0336751 3300048916 Bacteria 1210
130 Ga0496114_0000010 3300048917 Bacteria 363396
131 Ga0496115_0000363 3300048918 Bacteria 37766
132 Ga0496119_0035468 3300048922 Bacteria 3268
133 Ga0501042_0355982 3300049578 Bacteria 1059
134 Ga0501070_0130485 3300049586 Bacteria 2076
135 nmdc:mga00v17_165724_c1 3300050491 Bacteria 1424
136 nmdc:mga0qj67_32468_c1 3300050509 Bacteria 4071
137 nmdc:mga0qj67_66957_c1 3300050509 Bacteria 2861
138 nmdc:mga06r32_737633_c1 3300050510 Unclassified 949
139 nmdc:mga0a205_327_c3 3300050515 Bacteria 9225
140 nmdc:mga0a205_9_c2 3300050515 Bacteria 69167
141 Ga0495601_0002879 3300053077 Bacteria 9794
142 Ga0495601_0069471 3300053077 Bacteria 2247
143 Ga0495612_0001748 3300053078 Bacteria 8903
144 Ga0495612_0004391 3300053078 Bacteria 5847
145 Ga0495655_0000003 3300053083 Bacteria 303053
146 Ga0495619_0000570 3300053085 Bacteria 24473
147 Ga0495619_0014129 3300053085 Bacteria 5041
148 Ga0495619_0135161 3300053085 Bacteria 1696
149 Ga0500566_0002972 3300053094 Bacteria 10121
150 Ga0500641_0191442 3300053096 Unclassified 875
151 Ga0500628_000002 3300053129 Bacteria 357687
152 Ga0530510_0651240 3300061734 Bacteria 802

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048916 Ga0496113_0336751 Ga0496113_0336751_498_1079 187
2 3300006852 Ga0075433_10000058 Ga0075433_1000005824 192
3 3300013297 Ga0157378_10126059 Ga0157378_101260592 192
4 3300050515 nmdc:mga0a205_9_c2 nmdc:mga0a205_9_c2_27827_28417 192
5 3300032126 Ga0307415_100003452 Ga0307415_1000034525 193
6 3300005718 Ga0068866_10082222 Ga0068866_100822222 194
7 3300005843 Ga0068860_100252551 Ga0068860_1002525512 194
8 3300025899 Ga0207642_10061080 Ga0207642_100610802 194
9 3300026088 Ga0207641_10115860 Ga0207641_101158602 194
10 3300028381 Ga0268264_10551937 Ga0268264_105519371 194
11 3300053096 Ga0500641_0191442 Ga0500641_0191442_93_716 194
12 3300050509 nmdc:mga0qj67_66957_c1 nmdc:mga0qj67_66957_c1_2004_2600 196
13 3300047321 Ga0495676_0000421 Ga0495676_0000421_4257_4856 198
14 3300048907 Ga0496104_0000003 Ga0496104_0000003_49393_50004 198
15 3300048908 Ga0496105_0000031 Ga0496105_0000031_87217_87828 198
16 3300048909 Ga0496106_0000052 Ga0496106_0000052_10581_11177 198
17 3300048910 Ga0496107_0052335 Ga0496107_0052335_873_1469 198
18 3300046516 Ga0495628_0288763 Ga0495628_0288763_420_1082 200
19 3300048911 Ga0496108_0000153 Ga0496108_0000153_2255_2866 200
20 3300048912 Ga0496109_0000300 Ga0496109_0000300_8822_9433 200
21 3300050515 nmdc:mga0a205_327_c3 nmdc:mga0a205_327_c3_5338_5940 200
22 3300005577 Ga0068857_100324999 Ga0068857_1003249991 201
23 3300025944 Ga0207661_10107371 Ga0207661_101073711 201
24 3300048912 Ga0496109_0241566 Ga0496109_0241566_745_1362 201
25 3300048913 Ga0496110_0060815 Ga0496110_0060815_111_728 201
26 3300048914 Ga0496111_0003563 Ga0496111_0003563_1962_2579 201
27 3300005615 Ga0070702_100099867 Ga0070702_1000998672 202
28 3300046459 Ga0495629_0015740 Ga0495629_0015740_2006_2632 202
29 3300046516 Ga0495628_0029800 Ga0495628_0029800_2954_3565 203
30 3300046529 Ga0495652_0022187 Ga0495652_0022187_2614_3225 203
31 3300046543 Ga0495645_0019287 Ga0495645_0019287_858_1469 203
32 3300046683 Ga0495658_0005597 Ga0495658_0005597_230_853 203
33 3300048903 Ga0496100_0000003 Ga0496100_0000003_273995_274606 203
34 3300048904 Ga0496101_0000003 Ga0496101_0000003_273995_274606 203
35 3300048909 Ga0496106_0000048 Ga0496106_0000048_86200_86811 203
36 3300048910 Ga0496107_0000008 Ga0496107_0000008_165055_165666 203
37 3300049586 Ga0501070_0130485 Ga0501070_0130485_680_1318 203
38 3300046459 Ga0495629_0001322 Ga0495629_0001322_3881_4510 204
39 3300046642 Ga0495634_0000982 Ga0495634_0000982_6608_7222 204
40 3300053094 Ga0500566_0002972 Ga0500566_0002972_7478_8107 204
41 3300005841 Ga0068863_100627431 Ga0068863_1006274312 205
42 3300025937 Ga0207669_10169726 Ga0207669_101697262 205
43 3300048917 Ga0496114_0000010 Ga0496114_0000010_233891_234508 205
44 3300048918 Ga0496115_0000363 Ga0496115_0000363_36080_36697 205
45 3300014745 Ga0157377_10069672 Ga0157377_100696721 206
46 3300048907 Ga0496104_0001032 Ga0496104_0001032_3221_3850 206
47 3300048908 Ga0496105_0007238 Ga0496105_0007238_3704_4333 206
48 3300053077 Ga0495601_0069471 Ga0495601_0069471_889_1518 206
49 3300025929 Ga0207664_10181802 Ga0207664_101818023 207
50 3300009176 Ga0105242_10000017 Ga0105242_1000001756 208
51 3300025934 Ga0207686_10000016 Ga0207686_1000001655 208
52 3300025934 Ga0207686_10000029 Ga0207686_10000029100 208
53 3300046459 Ga0495629_0014106 Ga0495629_0014106_1410_2036 208
54 3300046529 Ga0495652_0000086 Ga0495652_0000086_76807_77451 208
55 3300047321 Ga0495676_0000252 Ga0495676_0000252_156_800 208
56 3300048903 Ga0496100_0000008 Ga0496100_0000008_28057_28701 208
57 3300048904 Ga0496101_0000016 Ga0496101_0000016_36839_37483 208
58 3300048909 Ga0496106_0000086 Ga0496106_0000086_45461_46105 208
59 3300048910 Ga0496107_0000009 Ga0496107_0000009_27771_28415 208
60 3300005535 Ga0070684_100188639 Ga0070684_1001886393 209
61 3300053083 Ga0495655_0000003 Ga0495655_0000003_155839_156567 209
62 3300053129 Ga0500628_000002 Ga0500628_000002_155839_156567 209
63 3300049578 Ga0501042_0355982 Ga0501042_0355982_125_835 210
64 3300061734 Ga0530510_0651240 Ga0530510_0651240_80_790 210
65 3300009098 Ga0105245_10000053 Ga0105245_1000005357 211
66 3300005436 Ga0070713_100000091 Ga0070713_1000000918 215
67 3300025928 Ga0207700_10000009 Ga0207700_10000009177 215
68 3300046516 Ga0495628_0001242 Ga0495628_0001242_2854_3582 217
69 3300046642 Ga0495634_0017546 Ga0495634_0017546_836_1552 218
70 3300044901 Ga0466960_0002331 Ga0466960_0002331_5812_6489 219
71 3300048088 Ga0495602_0014974 Ga0495602_0014974_3622_4338 219
72 3300028379 Ga0268266_10449094 Ga0268266_104490942 220
73 3300047446 Ga0495679_015230 Ga0495679_015230_153_815 220
74 3300005937 Ga0081455_10059771 Ga0081455_100597712 221
75 3300026118 Ga0207675_100113909 Ga0207675_1001139094 221
76 3300046689 Ga0495613_0000298 Ga0495613_0000298_4686_5414 222
77 3300005937 Ga0081455_10009325 Ga0081455_100093254 224
78 3300006844 Ga0075428_100114585 Ga0075428_1001145854 224
79 3300006846 Ga0075430_100026601 Ga0075430_1000266016 224
80 3300006847 Ga0075431_100012215 Ga0075431_1000122159 224
81 3300050509 nmdc:mga0qj67_32468_c1 nmdc:mga0qj67_32468_c1_1205_1921 224
82 3300050510 nmdc:mga06r32_737633_c1 nmdc:mga06r32_737633_c1_145_861 224
83 3300013297 Ga0157378_10012400 Ga0157378_100124004 225
84 3300048907 Ga0496104_0656572 Ga0496104_0656572_241_945 226
85 3300048907 Ga0496104_0000002 Ga0496104_0000002_24364_25110 228
86 3300048908 Ga0496105_0000001 Ga0496105_0000001_1303069_1303815 228
87 3300048922 Ga0496119_0035468 Ga0496119_0035468_1072_1818 228
88 3300005985 Ga0081539_10000872 Ga0081539_1000087215 229
89 3300005937 Ga0081455_10221635 Ga0081455_102216351 230
90 3300009176 Ga0105242_10001012 Ga0105242_1000101219 230
91 3300025934 Ga0207686_10000414 Ga0207686_1000041413 230
92 3300005336 Ga0070680_100030244 Ga0070680_1000302445 231
93 3300005458 Ga0070681_10024687 Ga0070681_100246873 231
94 3300005530 Ga0070679_100005814 Ga0070679_1000058143 231
95 3300025912 Ga0207707_10046001 Ga0207707_100460014 231
96 3300025917 Ga0207660_10032130 Ga0207660_100321304 231
97 3300025921 Ga0207652_10000177 Ga0207652_1000017737 231
98 3300026118 Ga0207675_100018763 Ga0207675_1000187635 231
99 3300006846 Ga0075430_100022693 Ga0075430_1000226937 232
100 3300046455 Ga0495603_0159241 Ga0495603_0159241_434_1156 232
101 3300046660 Ga0495625_0000020 Ga0495625_0000020_271456_272178 232
102 3300006038 Ga0075365_10049507 Ga0075365_100495071 233
103 3300006038 Ga0075365_10170410 Ga0075365_101704102 233
104 3300006048 Ga0075363_100083572 Ga0075363_1000835722 233
105 3300006051 Ga0075364_10189562 Ga0075364_101895622 233
106 3300013308 Ga0157375_10000076 Ga0157375_1000007678 233
107 3300050491 nmdc:mga00v17_165724_c1 nmdc:mga00v17_165724_c1_405_1148 233
108 3300005937 Ga0081455_10104307 Ga0081455_101043071 234
109 3300005981 Ga0081538_10060190 Ga0081538_100601903 234
110 3300009553 Ga0105249_10000095 Ga0105249_1000009596 234
111 3300013104 Ga0157370_10295448 Ga0157370_102954482 234
112 3300025961 Ga0207712_10000003 Ga0207712_10000003590 234
113 3300036401 Ga0373937_0159974 Ga0373937_0159974_1033_1749 234
114 3300037418 Ga0395900_0113811 Ga0395900_0113811_779_1507 234
115 3300037418 Ga0395900_0871885 Ga0395900_0871885_83_811 234
116 3300038443 Ga0395901_0285194 Ga0395901_0285194_409_1137 234
117 3300046455 Ga0495603_0000693 Ga0495603_0000693_2054_2758 234
118 3300046463 Ga0495653_0055322 Ga0495653_0055322_151_861 234
119 3300046463 Ga0495653_0238626 Ga0495653_0238626_429_1145 234
120 3300046535 Ga0495586_0101361 Ga0495586_0101361_808_1524 234
121 3300053078 Ga0495612_0004391 Ga0495612_0004391_3708_4424 234
122 3300053085 Ga0495619_0014129 Ga0495619_0014129_2990_3706 234
123 3300053085 Ga0495619_0135161 Ga0495619_0135161_827_1543 234
124 3300037466 Ga0395898_0150879 Ga0395898_0150879_1292_2023 235
125 3300038443 Ga0395901_0428061 Ga0395901_0428061_253_984 235
126 3300047322 Ga0495680_0105104 Ga0495680_0105104_143_868 235
127 3300048911 Ga0496108_0000002 Ga0496108_0000002_137585_138310 235
128 3300048912 Ga0496109_0000001 Ga0496109_0000001_137547_138272 235
129 3300053085 Ga0495619_0000570 Ga0495619_0000570_1021_1746 235
130 3300005549 Ga0070704_100430871 Ga0070704_1004308711 237
131 3300025924 Ga0207694_10000067 Ga0207694_1000006724 237
132 3300046515 Ga0495620_0000119 Ga0495620_0000119_28837_29550 237
133 3300014968 Ga0157379_10007617 Ga0157379_100076175 238
134 3300005333 Ga0070677_10000031 Ga0070677_1000003114 240
135 3300005535 Ga0070684_100059452 Ga0070684_1000594526 240
136 3300005548 Ga0070665_100000120 Ga0070665_100000120108 240
137 3300005578 Ga0068854_100006789 Ga0068854_1000067897 240
138 3300005842 Ga0068858_100000035 Ga0068858_100000035106 240
139 3300009098 Ga0105245_10001840 Ga0105245_1000184015 240
140 3300025893 Ga0207682_10000067 Ga0207682_1000006728 240
141 3300025927 Ga0207687_10000021 Ga0207687_1000002195 240
142 3300025927 Ga0207687_10001766 Ga0207687_100017661 240
143 3300025944 Ga0207661_10012321 Ga0207661_100123217 240
144 3300025981 Ga0207640_10004721 Ga0207640_100047217 240
145 3300026035 Ga0207703_10009202 Ga0207703_100092024 240
146 3300026078 Ga0207702_10186670 Ga0207702_101866702 240
147 3300028379 Ga0268266_10000023 Ga0268266_10000023468 240
148 3300046516 Ga0495628_0095662 Ga0495628_0095662_537_1259 240
149 3300046642 Ga0495634_0129485 Ga0495634_0129485_851_1573 240
150 3300046678 Ga0495599_0024100 Ga0495599_0024100_2137_2859 240
151 3300053077 Ga0495601_0002879 Ga0495601_0002879_6938_7660 240
152 3300053078 Ga0495612_0001748 Ga0495612_0001748_5600_6325 240

Structural Annotation

Top 5 Hits

ID Description Score Start End
7qhm-assembly1.cif.gz_L cytochrome bcc-aa3 supercomplex (respiratory supercomplex iii2/iv2) from corynebacterium glutamicum (stigmatellin and azide bound) 0.6887 128 186
7qhm-assembly1.cif.gz_L cytochrome bcc-aa3 supercomplex (respiratory supercomplex iii2/iv2) from corynebacterium glutamicum (stigmatellin and azide bound) 0.6418 128 186
8sc3-assembly1.cif.gz_A human oct1 bound to fenoterol in inward-open conformation 0.4654 91 230
1aep-assembly1.cif.gz_A molecular structure of an apolipoprotein determined at 2.5-angstroms resolution 0.3554 74 219
7kk9-assembly1.cif.gz_A fluoride channel fluc-ec2 mutant s81a/t82a with bromide 0.3504 92 221
ID Description Score Start End Superfamily
af_A0A0R0F7N4_1_104_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.6119 110 205 1.20.1250.20
af_Q9W1Z0_26_143_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5964 89 182 1.20.1250.20
af_I1JWX1_88_201_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5918 88 171 1.20.1250.20
af_A0A0R0F7N4_1_104_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5304 110 205 1.20.1250.20
af_Q9BKR9_103_269_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5234 89 223 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A561E7H2-F1-model_v4 Integral membrane protein 0.7803 89 208 GO:0016020
AF-A0A2M9AXF8-F1-model_v4 deleted 0.7742 89 203
AF-A0A7W0DNX9-F1-model_v4 Integral membrane protein 0.7622 93 207 GO:0016020
AF-A0A853DEC7-F1-model_v4 Multisubunit Na+/H+ antiporter MnhE subunit 0.7609 89 207 GO:0016020
AF-A0A7W9DMI8-F1-model_v4 Integral membrane protein 0.7561 92 207 GO:0016020

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pLDDT pTM Quality
73.1 0.71 High
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Predicted Structure (AlphaFold2)

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