F214498

General Info

Members Datasets Scaffolds Average Seq Length
152 93 152 290

Family's Representative Sequence

Representative Sequence 3300025924|Ga0207694_10261464|Ga0207694_102614642
Length 345
Sequence VRRIVTRRAGDGTGGSDRTGDMPGASSIERSVSVNPDRASIRRFRVTLASMSRPPDSPKVASHALVGRFATLEIRRFGSPGAFLAEPGAGAEADTILLLGPEIPPDAREGDQVSVFVALDSAGRPLATTTEPRLALGEVTFLTVTACTEFGAFVDWGLPKELLVPFAEQTLDVKVGERHPIGLYLDNTGRLAGTMRVNQLLTTDGEFHQGEWVEGEAWRNEPGIGLFVIIERRFLGLVPADEPHTLARGQAARFRVTRVHPDGKITLSARRPVHEELEHDAEVILGVLARPGAQAISDKSPPEEIRARFGLSKKAFKRAVGTLLKAGRVDVDDAGRVRIAPGRSG

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
9 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
16 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
24 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
26 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
27 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
28 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
29 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
30 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
31 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
52 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
53 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
54 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
55 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
56 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
57 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
58 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
59 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
60 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
61 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
62 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
63 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
64 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
65 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
66 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
67 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
68 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
69 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
70 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
71 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
72 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
73 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
74 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
75 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
76 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
77 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
78 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
79 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
80 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
81 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
82 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
83 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
84 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
85 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
86 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
87 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
88 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
89 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
90 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
91 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
92 3300053144 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 endosphere Metagenome Endosphere
93 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.63
Nodule 0
Rhizoplane 0.66
Rhizosphere 92.11
Stem 0
Stem Tuber 0
Unclassified 4.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10265881 3300003320 Bacteria 1229
2 rootH1_10113712 3300003323 Bacteria 5516
3 Ga0070680_100007327 3300005336 Bacteria 8414
4 Ga0070682_100036074 3300005337 Bacteria 3021
5 Ga0068868_100001915 3300005338 Bacteria 14297
6 Ga0070689_100000001 3300005340 Bacteria 1334580
7 Ga0070667_100369577 3300005367 Bacteria 1301
8 Ga0070663_100042062 3300005455 Bacteria 3209
9 Ga0070678_100008290 3300005456 Bacteria 6220
10 Ga0070678_100099810 3300005456 Bacteria 2247
11 Ga0070681_10023395 3300005458 Bacteria 6213
12 Ga0068867_100013475 3300005459 Bacteria 5793
13 Ga0068867_100065453 3300005459 Bacteria 2705
14 Ga0070685_10278748 3300005466 Bacteria 1118
15 Ga0070679_100052806 3300005530 Bacteria 4046
16 Ga0070679_100115051 3300005530 Bacteria 2675
17 Ga0068855_100000008 3300005563 Bacteria 269155
18 Ga0068855_100170220 3300005563 Bacteria 2467
19 Ga0068857_100038432 3300005577 Bacteria 4239
20 Ga0070702_100194238 3300005615 Bacteria 1338
21 Ga0068852_100128407 3300005616 Bacteria 2331
22 Ga0068859_100010590 3300005617 Bacteria 9283
23 Ga0068861_100110039 3300005719 Unclassified 2206
24 Ga0068860_100276431 3300005843 Unclassified 1640
25 Ga0070717_10107554 3300006028 Bacteria 2375
26 Ga0097621_100021715 3300006237 Bacteria 4972
27 Ga0068871_100034720 3300006358 Bacteria 4004
28 Ga0097620_100010590 3300006931 Bacteria 9283
29 Ga0105245_10055439 3300009098 Bacteria 3560
30 Ga0105237_10000213 3300009545 Bacteria 82121
31 Ga0105238_10001098 3300009551 Bacteria 27332
32 Ga0105238_10017310 3300009551 Bacteria 7323
33 Ga0157374_10187216 3300013296 Bacteria 2024
34 Ga0163163_10017680 3300014325 Bacteria 6656
35 Ga0157376_10014885 3300014969 Bacteria 5857
36 Ga0207707_10018138 3300025912 Bacteria 6133
37 Ga0207707_10544759 3300025912 Unclassified 986
38 Ga0207695_10000846 3300025913 Bacteria 56209
39 Ga0207671_10000266 3300025914 Bacteria 78418
40 Ga0207660_10044719 3300025917 Bacteria 3116
41 Ga0207652_10019935 3300025921 Bacteria 5522
42 Ga0207694_10001685 3300025924 Bacteria 18511
43 Ga0207694_10261464 3300025924 Bacteria 1418
44 Ga0207687_10103087 3300025927 Bacteria 2103
45 Ga0207709_10245185 3300025935 Bacteria 1305
46 Ga0207670_10000002 3300025936 Bacteria 783058
47 Ga0207667_10000088 3300025949 Bacteria 149413
48 Ga0207712_10636540 3300025961 Bacteria 926
49 Ga0207677_10003072 3300026023 Bacteria 8816
50 Ga0207703_10696663 3300026035 Unclassified 966
51 Ga0207678_10039143 3300026067 Bacteria 4115
52 Ga0207702_10364557 3300026078 Bacteria 1386
53 Ga0207641_10198318 3300026088 Bacteria 1849
54 Ga0207641_10310088 3300026088 Bacteria 1493
55 Ga0207648_10011518 3300026089 Bacteria 8326
56 Ga0207648_10016534 3300026089 Bacteria 6738
57 Ga0207674_10030100 3300026116 Bacteria 5710
58 Ga0207674_10256045 3300026116 Unclassified 1697
59 Ga0207675_100195299 3300026118 Bacteria 1942
60 Ga0207683_10053831 3300026121 Bacteria 3529
61 Ga0207683_10144904 3300026121 Bacteria 2141
62 Ga0265337_1008241 3300028556 Unclassified 3807
63 Ga0265337_1011641 3300028556 Bacteria 3022
64 Ga0265326_10008038 3300028558 Bacteria 3199
65 Ga0265319_1000752 3300028563 Bacteria 21084
66 Ga0265334_10004751 3300028573 Bacteria 5978
67 Ga0265318_10000026 3300028577 Bacteria 158673
68 Ga0265318_10003950 3300028577 Bacteria 7305
69 Ga0265318_10017830 3300028577 Bacteria 2907
70 Ga0265323_10003658 3300028653 Bacteria 6743
71 Ga0265323_10013171 3300028653 Bacteria 3304
72 Ga0307517_10017032 3300028786 Bacteria 9499
73 Ga0307515_10019642 3300028794 Bacteria 12136
74 Ga0265338_10046550 3300028800 Bacteria 3974
75 Ga0265338_10046943 3300028800 Unclassified 3951
76 Ga0265338_10193937 3300028800 Unclassified 1537
77 Ga0265324_10000159 3300029957 Bacteria 52051
78 Ga0265330_10000096 3300031235 Bacteria 74346
79 Ga0265330_10000265 3300031235 Bacteria 38536
80 Ga0265330_10000473 3300031235 Bacteria 27025
81 Ga0265330_10004456 3300031235 Bacteria 7103
82 Ga0265330_10008776 3300031235 Unclassified 4844
83 Ga0265330_10024914 3300031235 Bacteria 2713
84 Ga0265330_10060122 3300031235 Unclassified 1654
85 Ga0265332_10000538 3300031238 Bacteria 25727
86 Ga0265332_10007973 3300031238 Bacteria 4773
87 Ga0265332_10011350 3300031238 Unclassified 3960
88 Ga0265328_10005273 3300031239 Bacteria 5551
89 Ga0265320_10001107 3300031240 Bacteria 19892
90 Ga0265320_10006249 3300031240 Bacteria 7528
91 Ga0265320_10048052 3300031240 Unclassified 2084
92 Ga0265325_10001083 3300031241 Bacteria 19608
93 Ga0265325_10020140 3300031241 Bacteria 3680
94 Ga0265325_10029242 3300031241 Bacteria 2963
95 Ga0265329_10000007 3300031242 Bacteria 92470
96 Ga0265329_10001090 3300031242 Bacteria 13330
97 Ga0265340_10000294 3300031247 Bacteria 26183
98 Ga0265340_10027371 3300031247 Unclassified 2874
99 Ga0265340_10038105 3300031247 Unclassified 2379
100 Ga0265339_10000036 3300031249 Bacteria 124408
101 Ga0265339_10005942 3300031249 Bacteria 8074
102 Ga0265331_10000347 3300031250 Bacteria 49081
103 Ga0265331_10062596 3300031250 Bacteria 1754
104 Ga0265327_10031158 3300031251 Bacteria 3001
105 Ga0265316_10000033 3300031344 Bacteria 159729
106 Ga0265316_10000280 3300031344 Bacteria 57441
107 Ga0265316_10000599 3300031344 Bacteria 40220
108 Ga0265316_10003927 3300031344 Bacteria 14901
109 Ga0265316_10011710 3300031344 Bacteria 7898
110 Ga0265316_10018998 3300031344 Bacteria 5893
111 Ga0265316_10069862 3300031344 Bacteria 2710
112 Ga0307513_10013857 3300031456 Bacteria 9881
113 Ga0307509_10000026 3300031507 Bacteria 231153
114 Ga0265313_10000059 3300031595 Bacteria 107320
115 Ga0265313_10003226 3300031595 Bacteria 13413
116 Ga0265313_10005417 3300031595 Bacteria 9400
117 Ga0265313_10016425 3300031595 Bacteria 4255
118 Ga0265313_10017845 3300031595 Bacteria 4009
119 Ga0265313_10024671 3300031595 Bacteria 3207
120 Ga0265314_10000323 3300031711 Bacteria 67374
121 Ga0265314_10001037 3300031711 Bacteria 32369
122 Ga0265342_10000152 3300031712 Bacteria 78324
123 Ga0265342_10000180 3300031712 Bacteria 70458
124 Ga0265342_10005963 3300031712 Bacteria 9166
125 Ga0265342_10006384 3300031712 Bacteria 8785
126 Ga0265342_10034662 3300031712 Unclassified 3095
127 Ga0265342_10061234 3300031712 Bacteria 2218
128 Ga0265342_10165101 3300031712 Bacteria 1222
129 Ga0265342_10253650 3300031712 Unclassified 938
130 Ga0316576_10038854 3300031727 Bacteria 3415
131 Ga0307516_10059993 3300031730 Bacteria 3696
132 Ga0373961_0000016 3300035241 Bacteria 105708
133 Ga0451791_1775664 3300041451 Bacteria 1563
134 Ga0451577_0087838 3300042876 Bacteria 2774
135 Ga0453684_0001453 3300044712 Bacteria 67345
136 Ga0453684_0031769 3300044712 Bacteria 7407
137 Ga0453684_0035965 3300044712 Bacteria 6833
138 Ga0453684_0053384 3300044712 Bacteria 5276
139 Ga0453684_0153127 3300044712 Unclassified 2737
140 Ga0453684_0346414 3300044712 Unclassified 1676
141 Ga0466971_0042081 3300044719 Bacteria 2053
142 Ga0451576_0000124 3300045051 Bacteria 195346
143 Ga0451576_0383347 3300045051 Bacteria 1473
144 Ga0495629_0038835 3300046459 Bacteria 3353
145 Ga0495580_0058860 3300046472 Bacteria 2701
146 Ga0501067_0060011 3300049583 Bacteria 2105
147 Ga0501069_0269926 3300049585 Bacteria 994
148 Ga0501073_0070615 3300049589 Bacteria 2433
149 Ga0500635_0001807 3300053080 Bacteria 5220
150 Ga0500566_0045916 3300053094 Unclassified 2512
151 Ga0500585_023754 3300053144 Bacteria 2041
152 Ga0500603_005986 3300053150 Unclassified 2635

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025961 Ga0207712_10636540 Ga0207712_106365401 246
2 3300028577 Ga0265318_10017830 Ga0265318_100178302 252
3 3300031251 Ga0265327_10031158 Ga0265327_100311583 273
4 3300042876 Ga0451577_0087838 Ga0451577_0087838_317_1144 273
5 3300044712 Ga0453684_0001453 Ga0453684_0001453_65154_65987 273
6 3300044712 Ga0453684_0031769 Ga0453684_0031769_5762_6592 273
7 3300044712 Ga0453684_0035965 Ga0453684_0035965_2595_3446 273
8 3300044712 Ga0453684_0153127 Ga0453684_0153127_820_1647 273
9 3300045051 Ga0451576_0000124 Ga0451576_0000124_141864_142712 273
10 3300045051 Ga0451576_0383347 Ga0451576_0383347_95_925 273
11 3300005338 Ga0068868_100001915 Ga0068868_1000019154 275
12 3300005459 Ga0068867_100013475 Ga0068867_1000134754 275
13 3300006237 Ga0097621_100021715 Ga0097621_1000217154 275
14 3300006358 Ga0068871_100034720 Ga0068871_1000347202 275
15 3300014969 Ga0157376_10014885 Ga0157376_100148855 275
16 3300026023 Ga0207677_10003072 Ga0207677_100030728 275
17 3300026035 Ga0207703_10696663 Ga0207703_106966631 275
18 3300026088 Ga0207641_10198318 Ga0207641_101983183 275
19 3300026089 Ga0207648_10011518 Ga0207648_100115185 275
20 3300009551 Ga0105238_10017310 Ga0105238_100173102 276
21 3300031456 Ga0307513_10013857 Ga0307513_100138578 276
22 3300009098 Ga0105245_10055439 Ga0105245_100554392 280
23 3300013296 Ga0157374_10187216 Ga0157374_101872162 280
24 3300025927 Ga0207687_10103087 Ga0207687_101030872 280
25 3300006028 Ga0070717_10107554 Ga0070717_101075542 281
26 3300031235 Ga0265330_10024914 Ga0265330_100249142 281
27 3300031344 Ga0265316_10011710 Ga0265316_100117105 281
28 3300031712 Ga0265342_10253650 Ga0265342_102536501 281
29 3300053080 Ga0500635_0001807 Ga0500635_0001807_3626_4477 281
30 3300053094 Ga0500566_0045916 Ga0500566_0045916_1237_2088 281
31 3300053144 Ga0500585_023754 Ga0500585_023754_845_1696 281
32 3300053150 Ga0500603_005986 Ga0500603_005986_462_1313 281
33 3300005336 Ga0070680_100007327 Ga0070680_1000073276 282
34 3300005340 Ga0070689_100000001 Ga0070689_100000001165 282
35 3300005458 Ga0070681_10023395 Ga0070681_100233957 282
36 3300005530 Ga0070679_100052806 Ga0070679_1000528064 282
37 3300005530 Ga0070679_100115051 Ga0070679_1001150514 282
38 3300005563 Ga0068855_100170220 Ga0068855_1001702202 282
39 3300005577 Ga0068857_100038432 Ga0068857_1000384324 282
40 3300005616 Ga0068852_100128407 Ga0068852_1001284073 282
41 3300005617 Ga0068859_100010590 Ga0068859_1000105905 282
42 3300005719 Ga0068861_100110039 Ga0068861_1001100391 282
43 3300006931 Ga0097620_100010590 Ga0097620_1000105905 282
44 3300009545 Ga0105237_10000213 Ga0105237_1000021338 282
45 3300009551 Ga0105238_10001098 Ga0105238_1000109814 282
46 3300025912 Ga0207707_10018138 Ga0207707_100181382 282
47 3300025912 Ga0207707_10544759 Ga0207707_105447591 282
48 3300025913 Ga0207695_10000846 Ga0207695_1000084627 282
49 3300025914 Ga0207671_10000266 Ga0207671_1000026646 282
50 3300025917 Ga0207660_10044719 Ga0207660_100447193 282
51 3300025921 Ga0207652_10019935 Ga0207652_100199357 282
52 3300025924 Ga0207694_10001685 Ga0207694_1000168510 282
53 3300025924 Ga0207694_10261464 Ga0207694_102614642 282
54 3300025936 Ga0207670_10000002 Ga0207670_1000000268 282
55 3300026116 Ga0207674_10030100 Ga0207674_100301005 282
56 3300026116 Ga0207674_10256045 Ga0207674_102560451 282
57 3300028556 Ga0265337_1008241 Ga0265337_10082412 282
58 3300028558 Ga0265326_10008038 Ga0265326_100080382 282
59 3300028573 Ga0265334_10004751 Ga0265334_100047514 282
60 3300028577 Ga0265318_10003950 Ga0265318_100039504 282
61 3300028653 Ga0265323_10003658 Ga0265323_100036583 282
62 3300028653 Ga0265323_10013171 Ga0265323_100131713 282
63 3300028800 Ga0265338_10046550 Ga0265338_100465503 282
64 3300028800 Ga0265338_10046943 Ga0265338_100469431 282
65 3300028800 Ga0265338_10193937 Ga0265338_101939372 282
66 3300031235 Ga0265330_10000265 Ga0265330_1000026522 282
67 3300031235 Ga0265330_10000473 Ga0265330_100004735 282
68 3300031235 Ga0265330_10004456 Ga0265330_100044563 282
69 3300031235 Ga0265330_10008776 Ga0265330_100087761 282
70 3300031235 Ga0265330_10060122 Ga0265330_100601222 282
71 3300031238 Ga0265332_10011350 Ga0265332_100113502 282
72 3300031240 Ga0265320_10048052 Ga0265320_100480522 282
73 3300031241 Ga0265325_10001083 Ga0265325_100010836 282
74 3300031242 Ga0265329_10000007 Ga0265329_1000000763 282
75 3300031247 Ga0265340_10027371 Ga0265340_100273712 282
76 3300031247 Ga0265340_10038105 Ga0265340_100381051 282
77 3300031344 Ga0265316_10000033 Ga0265316_10000033131 282
78 3300031344 Ga0265316_10000599 Ga0265316_1000059931 282
79 3300031344 Ga0265316_10003927 Ga0265316_100039272 282
80 3300031344 Ga0265316_10018998 Ga0265316_100189984 282
81 3300031344 Ga0265316_10069862 Ga0265316_100698622 282
82 3300031507 Ga0307509_10000026 Ga0307509_10000026160 282
83 3300031595 Ga0265313_10003226 Ga0265313_100032269 282
84 3300031595 Ga0265313_10016425 Ga0265313_100164253 282
85 3300031595 Ga0265313_10017845 Ga0265313_100178452 282
86 3300031711 Ga0265314_10000323 Ga0265314_1000032351 282
87 3300031712 Ga0265342_10000152 Ga0265342_1000015223 282
88 3300031712 Ga0265342_10005963 Ga0265342_100059631 282
89 3300031712 Ga0265342_10006384 Ga0265342_100063845 282
90 3300031712 Ga0265342_10034662 Ga0265342_100346622 282
91 3300031712 Ga0265342_10061234 Ga0265342_100612342 282
92 3300031727 Ga0316576_10038854 Ga0316576_100388544 282
93 3300044712 Ga0453684_0053384 Ga0453684_0053384_4056_4928 282
94 3300044712 Ga0453684_0346414 Ga0453684_0346414_581_1483 282
95 3300005337 Ga0070682_100036074 Ga0070682_1000360742 283
96 3300005367 Ga0070667_100369577 Ga0070667_1003695772 283
97 3300005455 Ga0070663_100042062 Ga0070663_1000420623 283
98 3300005456 Ga0070678_100008290 Ga0070678_1000082904 283
99 3300005456 Ga0070678_100099810 Ga0070678_1000998102 283
100 3300005459 Ga0068867_100065453 Ga0068867_1000654532 283
101 3300005466 Ga0070685_10278748 Ga0070685_102787481 283
102 3300005563 Ga0068855_100000008 Ga0068855_10000000859 283
103 3300005615 Ga0070702_100194238 Ga0070702_1001942381 283
104 3300005843 Ga0068860_100276431 Ga0068860_1002764312 283
105 3300014325 Ga0163163_10017680 Ga0163163_100176802 283
106 3300025935 Ga0207709_10245185 Ga0207709_102451851 283
107 3300025949 Ga0207667_10000088 Ga0207667_1000008840 283
108 3300026067 Ga0207678_10039143 Ga0207678_100391432 283
109 3300026078 Ga0207702_10364557 Ga0207702_103645572 283
110 3300026088 Ga0207641_10310088 Ga0207641_103100882 283
111 3300026089 Ga0207648_10016534 Ga0207648_100165344 283
112 3300026118 Ga0207675_100195299 Ga0207675_1001952992 283
113 3300026121 Ga0207683_10053831 Ga0207683_100538314 283
114 3300026121 Ga0207683_10144904 Ga0207683_101449042 283
115 3300028563 Ga0265319_1000752 Ga0265319_10007528 283
116 3300028577 Ga0265318_10000026 Ga0265318_10000026107 283
117 3300028786 Ga0307517_10017032 Ga0307517_100170323 283
118 3300028794 Ga0307515_10019642 Ga0307515_1001964211 283
119 3300029957 Ga0265324_10000159 Ga0265324_1000015931 283
120 3300031235 Ga0265330_10000096 Ga0265330_1000009645 283
121 3300031238 Ga0265332_10000538 Ga0265332_100005389 283
122 3300031239 Ga0265328_10005273 Ga0265328_100052732 283
123 3300031240 Ga0265320_10001107 Ga0265320_100011078 283
124 3300031241 Ga0265325_10020140 Ga0265325_100201403 283
125 3300031241 Ga0265325_10029242 Ga0265325_100292422 283
126 3300031242 Ga0265329_10001090 Ga0265329_1000109010 283
127 3300031247 Ga0265340_10000294 Ga0265340_1000029423 283
128 3300031249 Ga0265339_10000036 Ga0265339_1000003632 283
129 3300031249 Ga0265339_10005942 Ga0265339_100059422 283
130 3300031250 Ga0265331_10000347 Ga0265331_100003478 283
131 3300031344 Ga0265316_10000280 Ga0265316_1000028017 283
132 3300031595 Ga0265313_10000059 Ga0265313_1000005959 283
133 3300031595 Ga0265313_10005417 Ga0265313_100054175 283
134 3300031595 Ga0265313_10024671 Ga0265313_100246713 283
135 3300031711 Ga0265314_10001037 Ga0265314_1000103711 283
136 3300031712 Ga0265342_10000180 Ga0265342_1000018055 283
137 3300035241 Ga0373961_0000016 Ga0373961_0000016_70230_71087 283
138 3300041451 Ga0451791_1775664 Ga0451791_1775664_169_1086 283
139 3300044719 Ga0466971_0042081 Ga0466971_0042081_342_1223 283
140 3300046472 Ga0495580_0058860 Ga0495580_0058860_276_1307 283
141 3300049585 Ga0501069_0269926 Ga0501069_0269926_33_902 283
142 3300049589 Ga0501073_0070615 Ga0501073_0070615_680_1600 283
143 3300003320 rootH2_10265881 rootH2_102658812 284
144 3300003323 rootH1_10113712 rootH1_101137123 284
145 3300028556 Ga0265337_1011641 Ga0265337_10116414 284
146 3300031238 Ga0265332_10007973 Ga0265332_100079734 284
147 3300031240 Ga0265320_10006249 Ga0265320_100062495 284
148 3300031250 Ga0265331_10062596 Ga0265331_100625962 284
149 3300031712 Ga0265342_10165101 Ga0265342_101651011 284
150 3300031730 Ga0307516_10059993 Ga0307516_100599932 284
151 3300046459 Ga0495629_0038835 Ga0495629_0038835_2330_3190 284
152 3300049583 Ga0501067_0060011 Ga0501067_0060011_1120_2010 284

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13509

S1_2

S1 domain

136

196

0.96

PF13509

S1_2

S1 domain

66

130

0.94

PF17783

CvfB_WH

CvfB-like winged helix domain

282

336

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
6zqe-assembly1.cif.gz_DT cryo-em structure of the 90s pre-ribosome from saccharomyces cerevisiae, state dis-a (poly-ala) 0.8943 255 284
1y14-assembly2.cif.gz_B crystal structure of yeast subcomplex of rpb4 and rpb7 0.8304 148 212
3psi-assembly1.cif.gz_A crystal structure of the spt6 core domain from saccharomyces cerevisiae, form spt6(239-1451) 0.83 151 212
2k4k-assembly1.cif.gz_A solution structure of gsp13 from bacillus subtilis 0.8277 146 214
5h1a-assembly2.cif.gz_A crystal structure of an iclr homolog from microbacterium sp. strain hm58-2 0.8163 220 282
ID Description Score Start End Superfamily
af_I1LWR7_1_142_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8851 255 283 1.10.10.10
af_B8JIP9_269_336_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8835 150 212 2.40.50.140
af_Q2FYP3_227_289_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8787 222 283 1.10.10.10
af_Q05022_496_582_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8677 149 212 2.40.50.140
2ahoB01 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8601 149 215 2.40.50.140
ID Description Score Start End GO Terms
AF-A0A3M2V9L4-F1-model_v4 Nucleic acid binding protein 0.952 71 134
AF-A0A354XFA0-F1-model_v4 RNA-binding protein 0.9505 75 128
AF-A0A849FDA5-F1-model_v4 GntR family transcriptional regulator 0.9469 7 106
AF-A0A3D4Q8C7-F1-model_v4 RNA-binding protein 0.9455 7 115 GO:0003676
AF-A0A3D6BU97-F1-model_v4 GntR family transcriptional regulator 0.9453 7 138

Feature Viewer

pLDDT pTM Quality
90.67 0.72 High
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Predicted Structure (AlphaFold2)

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