F214769
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 152 | 46 | 304 | 494 |
Family's Representative Sequence
| Representative Sequence | 3300031728|Ga0316578_10002617|Ga0316578_100026175 |
| Length | 526 |
| Sequence | MILPFDTRLPPDALLPLLVLASSLLPGLVIFFLAEQRVRLRTLLNLGGASIKLGLVAWMLWGVYHGRSYAARLPLVDGLDLALEVGPLSLLFLILSAGLWLVTTVYAVGYLEESPNRSRFFGFFSLCVTATVGVAMAGNLLTFLLFFEMLTLTTYPLVMHRGSEAARRAGTVYLAHTMFAGALLLAGTVWLYVLAGTLTFTPRGFVADIAETRPGTLTAIFALLIGGVGVKAALVPLHSWLPRAMVAPAPVSALLHAVAVVKAGAFGVVLIVYDVFGVEQAAELGVTGPLALVAAVTILYGSLRALFQDDLKRRLAFSTVSQVSYIVLGVAIVGPLASTGGIVHLVHQGIMKITLFFCAGNLAETLGIHKISEMNGVGRRMPWTMGAFSVAALGMIGVPPIAGFITKWYLGLGALEAGLHWPLYVLTASSLLNAAYFLPILHAAWLREPTTPWAESAPGARPAAPAADGTRWPLAGWWTRPETGWLLLLPPLVTAALSLLIGLLASSPFSPLEWSLLIAEREFQYP |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 2 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 3 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 4 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 5 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 6 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 7 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 8 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 9 | 3300032137 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC | Metagenome | Rhizosphere |
| 10 | 3300032139 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB | Metagenome | Rhizosphere |
| 11 | 3300032168 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 12 | 3300033524 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 13 | 3300033541 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 14 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 15 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 16 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 17 | 3300037588 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA | Metagenome | Rhizosphere |
| 18 | 3300038725 | Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 | Metagenome | Unclassified |
| 19 | 3300038726 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 | Metagenome | Unclassified |
| 20 | 3300038735 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 | Metagenome | Unclassified |
| 21 | 3300038741 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 | Metagenome | Unclassified |
| 22 | 3300038742 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 | Metagenome | Unclassified |
| 23 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 24 | 3300039110 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 | Metagenome | Unclassified |
| 25 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 26 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 27 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 28 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 29 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 30 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 31 | 2522572158 | Azospirillum halopraeferens DSM 3675 | Isolate | Unclassified |
| 32 | 2657244999 | Sinorhizobium sojae CCBAU 05684 | Isolate | Unclassified |
| 33 | 2728369097 | Stutzerimonas balearica st101 | Isolate | Unclassified |
| 34 | 2802429268 | Sinorhizobium sojae CCBAU 05684 | Isolate | Unclassified |
| 35 | 2855020534 | Paracoccus endophyticus SYSUP0003 | Isolate | Stem Tuber |
| 36 | 2881101125 | Ramlibacter rhizophilus CCTCC AB2015357 | Isolate | Rhizosphere |
| 37 | 2899275550 | Paracoccus hibiscisoli CCTCC AB2016182 | Isolate | Rhizosphere |
| 38 | 2917554339 | Chthonobacter rhizosphaerae yh7-1 | Isolate | Rhizosphere |
| 39 | 2919534386 | Rheinheimera pacifica 3879 | Isolate | Unclassified |
| 40 | 2932398195 | Dietzia sp. 2505 | Isolate | Rhizosphere |
| 41 | 2974294766 | Microbacterium proteolyticum SORGH_AS 209 | Isolate | Unclassified |
| 42 | 2974324384 | Microbacterium sp. SORGH_AS 344 | Isolate | Unclassified |
| 43 | 2984580707 | Microbacterium paludicola SORGH_AS919 | Isolate | Aerial Root |
| 44 | 3000405567 | Rhodobacteraceae bacterium LNNU 3342 | Isolate | Rhizosphere |
| 45 | 640427133 | Stutzerimonas stutzeri A1501 | Isolate | Rhizosphere |
| 46 | 651053060 | Stutzerimonas stutzeri CMT.A.9 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 86.84 |
| Metatranscriptomes | 2.63 |
| Isolates | 10.53 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0.66 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 0 |
| Rhizosphere | 81.58 |
| Stem | 0 |
| Stem Tuber | 0.66 |
| Unclassified | 1.32 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0316578_10002617 | 3300031728 | Bacteria | 7976 |
| 2 | Ga0157372_10298540 | 3300013307 | Bacteria | 1874 |
| 3 | Ga0316575_10001359 | 3300031665 | Bacteria | 7852 |
| 4 | Ga0316575_10003633 | 3300031665 | Bacteria | 5351 |
| 5 | Ga0316575_10005953 | 3300031665 | Bacteria | 4363 |
| 6 | Ga0316575_10016651 | 3300031665 | Bacteria | 2784 |
| 7 | Ga0316575_10019527 | 3300031665 | Bacteria | 2593 |
| 8 | Ga0316575_10025112 | 3300031665 | Bacteria | 2309 |
| 9 | Ga0316579_10001050 | 3300031691 | Bacteria | 9751 |
| 10 | Ga0316579_10001571 | 3300031691 | Bacteria | 8331 |
| 11 | Ga0316579_10005536 | 3300031691 | Bacteria | 5107 |
| 12 | Ga0316579_10009238 | 3300031691 | Bacteria | 4142 |
| 13 | Ga0316579_10009335 | 3300031691 | Bacteria | 4121 |
| 14 | Ga0316579_10033580 | 3300031691 | Bacteria | 2357 |
| 15 | Ga0316579_10035947 | 3300031691 | Bacteria | 2284 |
| 16 | Ga0316579_10065952 | 3300031691 | Bacteria | 1709 |
| 17 | Ga0316576_10000126 | 3300031727 | Bacteria | 29047 |
| 18 | Ga0316576_10000851 | 3300031727 | Bacteria | 15482 |
| 19 | Ga0316576_10004890 | 3300031727 | Bacteria | 8102 |
| 20 | Ga0316576_10006170 | 3300031727 | Bacteria | 7433 |
| 21 | Ga0316576_10012257 | 3300031727 | Bacteria | 5658 |
| 22 | Ga0316576_10013387 | 3300031727 | Bacteria | 5451 |
| 23 | Ga0316576_10014292 | 3300031727 | Bacteria | 5303 |
| 24 | Ga0316576_10014507 | 3300031727 | Bacteria | 5264 |
| 25 | Ga0316576_10014765 | 3300031727 | Bacteria | 5222 |
| 26 | Ga0316576_10014852 | 3300031727 | Bacteria | 5209 |
| 27 | Ga0316576_10017365 | 3300031727 | Bacteria | 4886 |
| 28 | Ga0316576_10024886 | 3300031727 | Bacteria | 4185 |
| 29 | Ga0316576_10099715 | 3300031727 | Bacteria | 2170 |
| 30 | Ga0316576_10135684 | 3300031727 | Bacteria | 1852 |
| 31 | Ga0316578_10000001 | 3300031728 | Bacteria | 72102 |
| 32 | Ga0316578_10000147 | 3300031728 | Bacteria | 18381 |
| 33 | Ga0316578_10003710 | 3300031728 | Bacteria | 7053 |
| 34 | Ga0316578_10004298 | 3300031728 | Bacteria | 6693 |
| 35 | Ga0316578_10004746 | 3300031728 | Bacteria | 6471 |
| 36 | Ga0316578_10005299 | 3300031728 | Bacteria | 6233 |
| 37 | Ga0316578_10019439 | 3300031728 | Bacteria | 3739 |
| 38 | Ga0316578_10022366 | 3300031728 | Bacteria | 3523 |
| 39 | Ga0316578_10027423 | 3300031728 | Bacteria | 3220 |
| 40 | Ga0316578_10028602 | 3300031728 | Bacteria | 3158 |
| 41 | Ga0316578_10042659 | 3300031728 | Bacteria | 2631 |
| 42 | Ga0316578_10043233 | 3300031728 | Bacteria | 2616 |
| 43 | Ga0316578_10057401 | 3300031728 | Bacteria | 2287 |
| 44 | Ga0316578_10094064 | 3300031728 | Bacteria | 1792 |
| 45 | Ga0316577_10001737 | 3300031733 | Bacteria | 10474 |
| 46 | Ga0316577_10004475 | 3300031733 | Bacteria | 7215 |
| 47 | Ga0316577_10006707 | 3300031733 | Bacteria | 6104 |
| 48 | Ga0316577_10011561 | 3300031733 | Bacteria | 4783 |
| 49 | Ga0316577_10023298 | 3300031733 | Bacteria | 3438 |
| 50 | Ga0316577_10029142 | 3300031733 | Bacteria | 3081 |
| 51 | Ga0316577_10045734 | 3300031733 | Bacteria | 2446 |
| 52 | Ga0316577_10056798 | 3300031733 | Bacteria | 2185 |
| 53 | Ga0307410_10128985 | 3300031852 | Bacteria | 1855 |
| 54 | Ga0316583_10000825 | 3300032133 | Bacteria | 9845 |
| 55 | Ga0316583_10002865 | 3300032133 | Bacteria | 6051 |
| 56 | Ga0316583_10036435 | 3300032133 | Bacteria | 1745 |
| 57 | Ga0316585_10000695 | 3300032137 | Bacteria | 8395 |
| 58 | Ga0316585_10001687 | 3300032137 | Bacteria | 5866 |
| 59 | Ga0316585_10016186 | 3300032137 | Bacteria | 2243 |
| 60 | Ga0316585_10021656 | 3300032137 | Bacteria | 1975 |
| 61 | Ga0316580_10001128 | 3300032139 | Bacteria | 6760 |
| 62 | Ga0316580_10003787 | 3300032139 | Bacteria | 4330 |
| 63 | Ga0316580_10008718 | 3300032139 | Unclassified | 3043 |
| 64 | Ga0316580_10009447 | 3300032139 | Bacteria | 2931 |
| 65 | Ga0316580_10011388 | 3300032139 | Bacteria | 2700 |
| 66 | Ga0316580_10015058 | 3300032139 | Bacteria | 2363 |
| 67 | Ga0316593_10014898 | 3300032168 | Bacteria | 2329 |
| 68 | Ga0316593_10021940 | 3300032168 | Bacteria | 2001 |
| 69 | Ga0316592_1000261 | 3300033524 | Bacteria | 6559 |
| 70 | Ga0316596_1000505 | 3300033541 | Bacteria | 6649 |
| 71 | Ga0316574_0001154 | 3300035398 | Bacteria | 12178 |
| 72 | Ga0316574_0001478 | 3300035398 | Bacteria | 11191 |
| 73 | Ga0316574_0002327 | 3300035398 | Bacteria | 9484 |
| 74 | Ga0316574_0003930 | 3300035398 | Bacteria | 7727 |
| 75 | Ga0316574_0005257 | 3300035398 | Bacteria | 6892 |
| 76 | Ga0316574_0012514 | 3300035398 | Bacteria | 4855 |
| 77 | Ga0316574_0015591 | 3300035398 | Bacteria | 4411 |
| 78 | Ga0316574_0028258 | 3300035398 | Bacteria | 3381 |
| 79 | Ga0316574_0029529 | 3300035398 | Bacteria | 3313 |
| 80 | Ga0316574_0029850 | 3300035398 | Bacteria | 3297 |
| 81 | Ga0316574_0055299 | 3300035398 | Bacteria | 2480 |
| 82 | Ga0316574_0134662 | 3300035398 | Bacteria | 1591 |
| 83 | Ga0316582_0000034 | 3300036647 | Bacteria | 31889 |
| 84 | Ga0316582_0004564 | 3300036647 | Bacteria | 7014 |
| 85 | Ga0316582_0005075 | 3300036647 | Bacteria | 6735 |
| 86 | Ga0316582_0010183 | 3300036647 | Bacteria | 5138 |
| 87 | Ga0316582_0013261 | 3300036647 | Bacteria | 4633 |
| 88 | Ga0316582_0013786 | 3300036647 | Bacteria | 4562 |
| 89 | Ga0316582_0014098 | 3300036647 | Bacteria | 4525 |
| 90 | Ga0316582_0021347 | 3300036647 | Bacteria | 3823 |
| 91 | Ga0316582_0034122 | 3300036647 | Bacteria | 3131 |
| 92 | Ga0316582_0062821 | 3300036647 | Bacteria | 2385 |
| 93 | Ga0316582_0073465 | 3300036647 | Bacteria | 2219 |
| 94 | Ga0316582_0077657 | 3300036647 | Bacteria | 2161 |
| 95 | Ga0316584_0000329 | 3300036712 | Bacteria | 24394 |
| 96 | Ga0316584_0000943 | 3300036712 | Bacteria | 16588 |
| 97 | Ga0316584_0002512 | 3300036712 | Bacteria | 11618 |
| 98 | Ga0316584_0003531 | 3300036712 | Bacteria | 10195 |
| 99 | Ga0316584_0006605 | 3300036712 | Bacteria | 7859 |
| 100 | Ga0316584_0006940 | 3300036712 | Bacteria | 7700 |
| 101 | Ga0316584_0015463 | 3300036712 | Bacteria | 5459 |
| 102 | Ga0316584_0018068 | 3300036712 | Bacteria | 5083 |
| 103 | Ga0316584_0018234 | 3300036712 | Bacteria | 5061 |
| 104 | Ga0316584_0019680 | 3300036712 | Bacteria | 4881 |
| 105 | Ga0316584_0027462 | 3300036712 | Bacteria | 4189 |
| 106 | Ga0316584_0043896 | 3300036712 | Bacteria | 3334 |
| 107 | Ga0316584_0044695 | 3300036712 | Bacteria | 3304 |
| 108 | Ga0316584_0044894 | 3300036712 | Bacteria | 3297 |
| 109 | Ga0316584_0091351 | 3300036712 | Bacteria | 2279 |
| 110 | Ga0316584_0127727 | 3300036712 | Bacteria | 1899 |
| 111 | Ga0316581_0003370 | 3300037588 | Bacteria | 3973 |
| 112 | Ga0400484_18313 | 3300038725 | Bacteria | 9610 |
| 113 | Ga0400490_23988 | 3300038726 | Bacteria | 13614 |
| 114 | Ga0400490_50525 | 3300038726 | Unclassified | 1785 |
| 115 | Ga0400485_16091 | 3300038735 | Bacteria | 11514 |
| 116 | Ga0400485_21592 | 3300038735 | Bacteria | 15450 |
| 117 | Ga0400488_14685 | 3300038741 | Bacteria | 5314 |
| 118 | Ga0400486_15780 | 3300038742 | Bacteria | 5993 |
| 119 | Ga0400486_26581 | 3300038742 | Bacteria | 17802 |
| 120 | Ga0400483_046771 | 3300039062 | Bacteria | 7893 |
| 121 | Ga0400483_057873 | 3300039062 | Bacteria | 24525 |
| 122 | Ga0400483_121972 | 3300039062 | Bacteria | 3797 |
| 123 | Ga0400483_177015 | 3300039062 | Bacteria | 39327 |
| 124 | Ga0400483_184460 | 3300039062 | Bacteria | 6330 |
| 125 | Ga0400483_197032 | 3300039062 | Bacteria | 5627 |
| 126 | Ga0400483_208983 | 3300039062 | Bacteria | 4024 |
| 127 | Ga0400483_246914 | 3300039062 | Bacteria | 10247 |
| 128 | Ga0400483_254969 | 3300039062 | Bacteria | 18202 |
| 129 | Ga0400487_30797 | 3300039110 | Bacteria | 14421 |
| 130 | Ga0400487_40075 | 3300039110 | Bacteria | 7162 |
| 131 | Ga0439449_0006840 | 3300042007 | Bacteria | 4349 |
| 132 | Ga0453684_0003093 | 3300044712 | Bacteria | 38362 |
| 133 | Ga0501034_0043193 | 3300049571 | Bacteria | 4563 |
| 134 | Ga0501040_0055690 | 3300049576 | Bacteria | 2712 |
| 135 | Ga0501081_0093152 | 3300049743 | Bacteria | 2121 |
| 136 | Ga0501045_0083121 | 3300049824 | Bacteria | 2362 |
| 137 | 2523106418 | 2522572158 | Bacteria | 6514390 |
| 138 | 2657686198 | 2657244999 | Bacteria | 5946535 |
| 139 | 2729146636 | 2728369097 | Bacteria | 4333476 |
| 140 | 2804755106 | 2802429268 | Bacteria | 6094027 |
| 141 | 2855022247 | 2855020534 | Bacteria | 3204685 |
| 142 | 2881101131 | 2881101125 | Bacteria | 4590519 |
| 143 | 2899277238 | 2899275550 | Bacteria | 3958688 |
| 144 | 2917558708 | 2917554339 | Bacteria | 4987857 |
| 145 | 2919535854 | 2919534386 | Bacteria | 4577686 |
| 146 | 2932400188 | 2932398195 | Bacteria | 3847976 |
| 147 | 2974295815 | 2974294766 | Bacteria | 3767688 |
| 148 | 2974324386 | 2974324384 | Bacteria | 3750535 |
| 149 | 2984582431 | 2984580707 | Bacteria | 3351387 |
| 150 | 3000408619 | 3000405567 | Bacteria | 3779330 |
| 151 | 640486340 | 640427133 | Bacteria | 4567418 |
| 152 | 651174305 | 651053060 | Bacteria | 4689946 |
| 153 | Ga0316578_10002617 | |||
| 154 | Ga0157372_10298540 | |||
| 155 | Ga0316575_10001359 | |||
| 156 | Ga0316575_10003633 | |||
| 157 | Ga0316575_10005953 | |||
| 158 | Ga0316575_10016651 | |||
| 159 | Ga0316575_10019527 | |||
| 160 | Ga0316575_10025112 | |||
| 161 | Ga0316579_10001050 | |||
| 162 | Ga0316579_10001571 | |||
| 163 | Ga0316579_10005536 | |||
| 164 | Ga0316579_10009238 | |||
| 165 | Ga0316579_10009335 | |||
| 166 | Ga0316579_10033580 | |||
| 167 | Ga0316579_10035947 | |||
| 168 | Ga0316579_10065952 | |||
| 169 | Ga0316576_10000126 | |||
| 170 | Ga0316576_10000851 | |||
| 171 | Ga0316576_10004890 | |||
| 172 | Ga0316576_10006170 | |||
| 173 | Ga0316576_10012257 | |||
| 174 | Ga0316576_10013387 | |||
| 175 | Ga0316576_10014292 | |||
| 176 | Ga0316576_10014507 | |||
| 177 | Ga0316576_10014765 | |||
| 178 | Ga0316576_10014852 | |||
| 179 | Ga0316576_10017365 | |||
| 180 | Ga0316576_10024886 | |||
| 181 | Ga0316576_10099715 | |||
| 182 | Ga0316576_10135684 | |||
| 183 | Ga0316578_10000001 | |||
| 184 | Ga0316578_10000147 | |||
| 185 | Ga0316578_10003710 | |||
| 186 | Ga0316578_10004298 | |||
| 187 | Ga0316578_10004746 | |||
| 188 | Ga0316578_10005299 | |||
| 189 | Ga0316578_10019439 | |||
| 190 | Ga0316578_10022366 | |||
| 191 | Ga0316578_10027423 | |||
| 192 | Ga0316578_10028602 | |||
| 193 | Ga0316578_10042659 | |||
| 194 | Ga0316578_10043233 | |||
| 195 | Ga0316578_10057401 | |||
| 196 | Ga0316578_10094064 | |||
| 197 | Ga0316577_10001737 | |||
| 198 | Ga0316577_10004475 | |||
| 199 | Ga0316577_10006707 | |||
| 200 | Ga0316577_10011561 | |||
| 201 | Ga0316577_10023298 | |||
| 202 | Ga0316577_10029142 | |||
| 203 | Ga0316577_10045734 | |||
| 204 | Ga0316577_10056798 | |||
| 205 | Ga0307410_10128985 | |||
| 206 | Ga0316583_10000825 | |||
| 207 | Ga0316583_10002865 | |||
| 208 | Ga0316583_10036435 | |||
| 209 | Ga0316585_10000695 | |||
| 210 | Ga0316585_10001687 | |||
| 211 | Ga0316585_10016186 | |||
| 212 | Ga0316585_10021656 | |||
| 213 | Ga0316580_10001128 | |||
| 214 | Ga0316580_10003787 | |||
| 215 | Ga0316580_10008718 | |||
| 216 | Ga0316580_10009447 | |||
| 217 | Ga0316580_10011388 | |||
| 218 | Ga0316580_10015058 | |||
| 219 | Ga0316593_10014898 | |||
| 220 | Ga0316593_10021940 | |||
| 221 | Ga0316592_1000261 | |||
| 222 | Ga0316596_1000505 | |||
| 223 | Ga0316574_0001154 | |||
| 224 | Ga0316574_0001478 | |||
| 225 | Ga0316574_0002327 | |||
| 226 | Ga0316574_0003930 | |||
| 227 | Ga0316574_0005257 | |||
| 228 | Ga0316574_0012514 | |||
| 229 | Ga0316574_0015591 | |||
| 230 | Ga0316574_0028258 | |||
| 231 | Ga0316574_0029529 | |||
| 232 | Ga0316574_0029850 | |||
| 233 | Ga0316574_0055299 | |||
| 234 | Ga0316574_0134662 | |||
| 235 | Ga0316582_0000034 | |||
| 236 | Ga0316582_0004564 | |||
| 237 | Ga0316582_0005075 | |||
| 238 | Ga0316582_0010183 | |||
| 239 | Ga0316582_0013261 | |||
| 240 | Ga0316582_0013786 | |||
| 241 | Ga0316582_0014098 | |||
| 242 | Ga0316582_0021347 | |||
| 243 | Ga0316582_0034122 | |||
| 244 | Ga0316582_0062821 | |||
| 245 | Ga0316582_0073465 | |||
| 246 | Ga0316582_0077657 | |||
| 247 | Ga0316584_0000329 | |||
| 248 | Ga0316584_0000943 | |||
| 249 | Ga0316584_0002512 | |||
| 250 | Ga0316584_0003531 | |||
| 251 | Ga0316584_0006605 | |||
| 252 | Ga0316584_0006940 | |||
| 253 | Ga0316584_0015463 | |||
| 254 | Ga0316584_0018068 | |||
| 255 | Ga0316584_0018234 | |||
| 256 | Ga0316584_0019680 | |||
| 257 | Ga0316584_0027462 | |||
| 258 | Ga0316584_0043896 | |||
| 259 | Ga0316584_0044695 | |||
| 260 | Ga0316584_0044894 | |||
| 261 | Ga0316584_0091351 | |||
| 262 | Ga0316584_0127727 | |||
| 263 | Ga0316581_0003370 | |||
| 264 | Ga0400484_18313 | |||
| 265 | Ga0400490_23988 | |||
| 266 | Ga0400490_50525 | |||
| 267 | Ga0400485_16091 | |||
| 268 | Ga0400485_21592 | |||
| 269 | Ga0400488_14685 | |||
| 270 | Ga0400486_15780 | |||
| 271 | Ga0400486_26581 | |||
| 272 | Ga0400483_046771 | |||
| 273 | Ga0400483_057873 | |||
| 274 | Ga0400483_121972 | |||
| 275 | Ga0400483_177015 | |||
| 276 | Ga0400483_184460 | |||
| 277 | Ga0400483_197032 | |||
| 278 | Ga0400483_208983 | |||
| 279 | Ga0400483_246914 | |||
| 280 | Ga0400483_254969 | |||
| 281 | Ga0400487_30797 | |||
| 282 | Ga0400487_40075 | |||
| 283 | Ga0439449_0006840 | |||
| 284 | Ga0453684_0003093 | |||
| 285 | Ga0501034_0043193 | |||
| 286 | Ga0501040_0055690 | |||
| 287 | Ga0501081_0093152 | |||
| 288 | Ga0501045_0083121 | |||
| 289 | 2523106418 | |||
| 290 | 2657686198 | |||
| 291 | 2729146636 | |||
| 292 | 2804755106 | |||
| 293 | 2855022247 | |||
| 294 | 2881101131 | |||
| 295 | 2899277238 | |||
| 296 | 2917558708 | |||
| 297 | 2919535854 | |||
| 298 | 2932400188 | |||
| 299 | 2974295815 | |||
| 300 | 2974324386 | |||
| 301 | 2984582431 | |||
| 302 | 3000408619 | |||
| 303 | 640486340 | |||
| 304 | 651174305 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7o6y-assembly1.cif.gz_5 | cryo-em structure of respiratory complex i under turnover | 0.9066 | 10 | 478 |
| 6u8y-assembly1.cif.gz_h | structure of the membrane-bound sulfane sulfur reductase (mbs), an archaeal respiratory membrane complex | 0.9051 | 11 | 486 |
| 7b0n-assembly1.cif.gz_L | a 3.7-angstrom structure of yarrowia lipolytica complex i with an r121m mutation in nucm. | 0.9043 | 10 | 471 |
| 6tjv-assembly1.cif.gz_D | structure of the ndh-1ms complex from thermosynechococcus elongatus | 0.8948 | 11 | 487 |
| 8e9h-assembly1.cif.gz_L | mycobacterial respiratory complex i, fully-inserted quinone | 0.8942 | 11 | 487 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P9WIX3_4_99_1.10.287.3510 | Mainly Alpha;Orthogonal Bundle;Helix Hairpins; | 0.8715 | 116 | 197 | 1.10.287.3510 |
| af_Q2G2H7_1_127_1.20.1070.10 | Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins | 0.8406 | 7 | 132 | 1.20.1070.10 |
| af_P23482_1_130_1.20.1070.10 | Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins | 0.8307 | 7 | 132 | 1.20.1070.10 |
| af_Q2G212_1_126_1.20.1070.10 | Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins | 0.8307 | 7 | 129 | 1.20.1070.10 |
| af_Q2G2H7_1_127_1.20.1070.10 | Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins | 0.8166 | 7 | 132 | 1.20.1070.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7W0FE63-F1-model_v4 | Monovalent cation/H+ antiporter subunit D family protein | 0.9845 | 10 | 157 |
GO:0016020
|
| AF-A0A2S6R4B1-F1-model_v4 | NADH:quinone oxidoreductase/Mrp antiporter transmembrane domain-containing protein | 0.9744 | 62 | 487 |
GO:0005886
GO:0016491 |
| AF-A0A848YIP7-F1-model_v4 | Monovalent cation/H+ antiporter subunit D family protein | 0.9728 | 81 | 489 |
GO:0005886
|
| AF-A0A8B6S9M6-F1-model_v4 | deleted | 0.9704 | 10 | 372 |
|
| AF-S3IBH8-F1-model_v4 | Monovalent cation/H+ antiporter subunit D | 0.9698 | 10 | 487 |
GO:0012505
GO:0016020 |