F214770
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 152 | 119 | 304 | 596 |
Family's Representative Sequence
| Representative Sequence | 3300031730|Ga0307516_10009364|Ga0307516_100093647 |
| Length | 650 |
| Sequence | MPQTSKPAHAPAHVHPLRRLLGYAGGYRRDMVLASVYSVLNKFFDVLPELLIGIAVDVVVNRKASFVARLGVEDPKQQLVLLTVLTIVIWLGESFFEYLYELKWRGLAQSLQHEMRMEAYTHVQRLEMAYFERNRTGNLLAVLNEDVNQMERFLNGGANDLIQVFVGSLMVGGVFFALTAKLAALALIPVPLILYGAFWFQRKLATRYTAMREAAGAMATRLNNNLQGIATIKAYTAEDFEARHIAQASIAYRERNREAIRLSAAITPVIRIAILAGFSVTMLYGGLMTLEGDLGVGSYSALVYLTQRLLWPLTRLAELTDLYQRSMASIERVMNLLQTPIAIPYAGVALPRARVRGELVFDDLRFSYPAAAGATDVRTFAGALASGLVKPALDGISLRIAPGEMVAFVGSTGSGKSTLVKLLLRYYDTVPGRIRLDGADITTLDLQDLRRAIGYVSQDSFLTDGTVAENIAYGLHDVSEADIVRAAQAAEAHEFIRALPQGYRTPVGERGMKLSGGQRQRLALARAILKNPPILILDEATSAVDNETEAAIQRSLDKLVQGRTSILIAHRLSTVRQAHCIHVMEAGRIAESGTHDELVARGGLYAALWRLQTGERQDIPHVFDVRGVLAPAHGGRDEPPPTSAASKEPT |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 2 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 3 | 3300003761 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 | Metagenome | Endosphere |
| 4 | 3300003763 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 | Metagenome | Endosphere |
| 5 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 6 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 8 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 10 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 11 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 12 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 13 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 14 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 15 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 16 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 17 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 18 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 19 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 20 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 21 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 22 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 23 | 3300025242 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 24 | 3300025253 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 25 | 3300025256 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) | Metagenome | Unclassified |
| 26 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 27 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 28 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 41 | 3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Metagenome | Rhizosphere |
| 42 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 43 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 44 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 45 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 46 | 3300031242 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG | Metagenome | Rhizosphere |
| 47 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 48 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 49 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 50 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 51 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 52 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 53 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 54 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 55 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 56 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 57 | 3300032139 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB | Metagenome | Rhizosphere |
| 58 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 59 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 60 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 61 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 62 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 63 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 64 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 65 | 3300041453 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG | Metagenome | Rhizoplane |
| 66 | 3300041486 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG | Metagenome | Rhizoplane |
| 67 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 68 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 69 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 70 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 71 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 72 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 73 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 74 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046794 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 81 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 82 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 83 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 84 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 85 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 86 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 87 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 88 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 89 | 3300049680 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_B_3_drought | Metagenome | Rhizosphere |
| 90 | 3300049686 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control | Metagenome | Rhizosphere |
| 91 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 92 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 93 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 94 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 95 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 96 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 97 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 98 | 3300053080 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere | Metagenome | Endosphere |
| 99 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 100 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 101 | 2524614729 | Arenimonas oryziterrae YC6267, DSM 21050 | Isolate | Rhizosphere |
| 102 | 2617270889 | Nostoc punctiforme PCC 73102 | Isolate | Unclassified |
| 103 | 2627854209 | Arenimonas oryziterrae YC6267, DSM 21050 | Isolate | Rhizosphere |
| 104 | 2643221604 | Nocardioides sp. Root190 | Isolate | Unclassified |
| 105 | 2643221617 | Nocardioides sp. Root79 | Isolate | Unclassified |
| 106 | 2643221620 | Nocardioides sp. Root240 | Isolate | Unclassified |
| 107 | 2738541305 | Nocardioides sp. CF167 | Isolate | Unclassified |
| 108 | 2811994874 | Nocardioides sp. SLBN-35 | Isolate | Unclassified |
| 109 | 2831426010 | Nostoc sp. 106C | Isolate | Unclassified |
| 110 | 2848694841 | Nostoc sp. RF31YmG | Isolate | Unclassified |
| 111 | 2849660919 | Nostoc sp. T09 | Isolate | Unclassified |
| 112 | 2857481737 | Nocardioides sp. R-74106 | Isolate | Unclassified |
| 113 | 2886627955 | Nostoc sp. PA-18-2419 JC1668 | Isolate | Unclassified |
| 114 | 2913844669 | Nostocales cyanobacterium LEGE 12452 | Isolate | Unclassified |
| 115 | 2913912277 | Desmonostoc muscorum LEGE 12446 | Isolate | Unclassified |
| 116 | 2913939268 | Nostoc sp. LEGE 12447 | Isolate | Unclassified |
| 117 | 2998344455 | Vogesella urethralis SLBN-145 | Isolate | Rhizosphere |
| 118 | 642555144 | Nostoc punctiforme PCC 73102 | Isolate | Unclassified |
| 119 | 8033684223 | Streptomyces phytophilus PIP175 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 86.18 |
| Metatranscriptomes | 0 |
| Isolates | 13.82 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 5.92 |
| Nodule | 0 |
| Rhizoplane | 2.63 |
| Rhizosphere | 72.37 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 1.97 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0307516_10009364 | 3300031730 | Bacteria | 10929 |
| 2 | rootH1_10019610 | 3300003323 | Bacteria | 5648 |
| 3 | Ga0055535_1001112 | 3300003761 | Bacteria | 16330 |
| 4 | Ga0055529_1000382 | 3300003763 | Bacteria | 48005 |
| 5 | Ga0070682_100001856 | 3300005337 | Bacteria | 11788 |
| 6 | Ga0070682_100006555 | 3300005337 | Bacteria | 6531 |
| 7 | Ga0070682_100027065 | 3300005337 | Bacteria | 3438 |
| 8 | Ga0070663_100001505 | 3300005455 | Bacteria | 12816 |
| 9 | Ga0070707_100024430 | 3300005468 | Bacteria | 5724 |
| 10 | Ga0070672_100001619 | 3300005543 | Bacteria | 13999 |
| 11 | Ga0068855_100002642 | 3300005563 | Bacteria | 22100 |
| 12 | Ga0068855_100066780 | 3300005563 | Bacteria | 4193 |
| 13 | Ga0068861_100006427 | 3300005719 | Bacteria | 8006 |
| 14 | Ga0075431_100147957 | 3300006847 | Unclassified | 2419 |
| 15 | Ga0075434_100035666 | 3300006871 | Bacteria | 4917 |
| 16 | Ga0105240_10074690 | 3300009093 | Bacteria | 4183 |
| 17 | Ga0105240_10103301 | 3300009093 | Bacteria | 3463 |
| 18 | Ga0111539_10001351 | 3300009094 | Bacteria | 32652 |
| 19 | Ga0114129_10000027 | 3300009147 | Bacteria | 112969 |
| 20 | Ga0114129_10226976 | 3300009147 | Unclassified | 2516 |
| 21 | Ga0105248_10000323 | 3300009177 | Bacteria | 56612 |
| 22 | Ga0105237_10053504 | 3300009545 | Bacteria | 4049 |
| 23 | Ga0105249_10018993 | 3300009553 | Bacteria | 6129 |
| 24 | Ga0157378_10080356 | 3300013297 | Bacteria | 2945 |
| 25 | Ga0163162_10052237 | 3300013306 | Bacteria | 4104 |
| 26 | Ga0157375_10091064 | 3300013308 | Bacteria | 3110 |
| 27 | Ga0213872_10000023 | 3300021361 | Bacteria | 157443 |
| 28 | Ga0213872_10000033 | 3300021361 | Bacteria | 135667 |
| 29 | Ga0213872_10001317 | 3300021361 | Bacteria | 16443 |
| 30 | Ga0213872_10004857 | 3300021361 | Bacteria | 7015 |
| 31 | Ga0213872_10045610 | 3300021361 | Bacteria | 1994 |
| 32 | Ga0209258_100683 | 3300025242 | Bacteria | 23569 |
| 33 | Ga0209677_101079 | 3300025253 | Bacteria | 12880 |
| 34 | Ga0209759_1001454 | 3300025256 | Bacteria | 13344 |
| 35 | Ga0209759_1002611 | 3300025256 | Bacteria | 7769 |
| 36 | Ga0209455_1000108 | 3300025272 | Bacteria | 193021 |
| 37 | Ga0207705_10030428 | 3300025909 | Bacteria | 3852 |
| 38 | Ga0207695_10154255 | 3300025913 | Bacteria | 2232 |
| 39 | Ga0207671_10044887 | 3300025914 | Bacteria | 3267 |
| 40 | Ga0207657_10031153 | 3300025919 | Bacteria | 4834 |
| 41 | Ga0207646_10055105 | 3300025922 | Bacteria | 3556 |
| 42 | Ga0207691_10000636 | 3300025940 | Bacteria | 34744 |
| 43 | Ga0207711_10005438 | 3300025941 | Bacteria | 10768 |
| 44 | Ga0207689_10022649 | 3300025942 | Bacteria | 5278 |
| 45 | Ga0207667_10001824 | 3300025949 | Bacteria | 26813 |
| 46 | Ga0207651_10000885 | 3300025960 | Bacteria | 13124 |
| 47 | Ga0207712_10026141 | 3300025961 | Bacteria | 3886 |
| 48 | Ga0207675_100005204 | 3300026118 | Bacteria | 12524 |
| 49 | Ga0207698_10004358 | 3300026142 | Bacteria | 8616 |
| 50 | Ga0265319_1006207 | 3300028563 | Bacteria | 5569 |
| 51 | Ga0265318_10000019 | 3300028577 | Bacteria | 169214 |
| 52 | Ga0265336_10000039 | 3300028666 | Bacteria | 149376 |
| 53 | Ga0265324_10000223 | 3300029957 | Bacteria | 43654 |
| 54 | Ga0265332_10000014 | 3300031238 | Bacteria | 249035 |
| 55 | Ga0265332_10000076 | 3300031238 | Bacteria | 84301 |
| 56 | Ga0265320_10031261 | 3300031240 | Bacteria | 2736 |
| 57 | Ga0265329_10001645 | 3300031242 | Bacteria | 10680 |
| 58 | Ga0265331_10000775 | 3300031250 | Bacteria | 26589 |
| 59 | Ga0265313_10041379 | 3300031595 | Bacteria | 2271 |
| 60 | Ga0307508_10001805 | 3300031616 | Bacteria | 23723 |
| 61 | Ga0265342_10000347 | 3300031712 | Bacteria | 51984 |
| 62 | Ga0316576_10001110 | 3300031727 | Bacteria | 14060 |
| 63 | Ga0316576_10014099 | 3300031727 | Bacteria | 5331 |
| 64 | Ga0316578_10003117 | 3300031728 | Bacteria | 7488 |
| 65 | Ga0316578_10022655 | 3300031728 | Bacteria | 3506 |
| 66 | Ga0307516_10012165 | 3300031730 | Bacteria | 9290 |
| 67 | Ga0316577_10009565 | 3300031733 | Bacteria | 5217 |
| 68 | Ga0307413_10003615 | 3300031824 | Bacteria | 6554 |
| 69 | Ga0307407_10026178 | 3300031903 | Bacteria | 3086 |
| 70 | Ga0307415_100051144 | 3300032126 | Bacteria | 2803 |
| 71 | Ga0316580_10002225 | 3300032139 | Bacteria | 5296 |
| 72 | Ga0316574_0000049 | 3300035398 | Bacteria | 29922 |
| 73 | Ga0316574_0002216 | 3300035398 | Bacteria | 9665 |
| 74 | Ga0373933_0063579 | 3300035724 | Bacteria | 2231 |
| 75 | Ga0316582_0005423 | 3300036647 | Bacteria | 6568 |
| 76 | Ga0316584_0001063 | 3300036712 | Bacteria | 16026 |
| 77 | Ga0395900_0027699 | 3300037418 | Bacteria | 5805 |
| 78 | Ga0436365_1901632 | 3300039437 | Bacteria | 25356 |
| 79 | Ga0436361_0060434 | 3300039447 | Bacteria | 165633 |
| 80 | Ga0436361_0083965 | 3300039447 | Bacteria | 9821 |
| 81 | Ga0436361_0130561 | 3300039447 | Bacteria | 34355 |
| 82 | Ga0436361_0453247 | 3300039447 | Bacteria | 42325 |
| 83 | Ga0436361_0883184 | 3300039447 | Bacteria | 8468 |
| 84 | Ga0451797_0725596 | 3300041453 | Bacteria | 2568 |
| 85 | Ga0451807_0407619 | 3300041486 | Bacteria | 4015 |
| 86 | Ga0451807_0902201 | 3300041486 | Bacteria | 5095 |
| 87 | Ga0451853_0361019 | 3300041512 | Bacteria | 31160 |
| 88 | Ga0451853_0565616 | 3300041512 | Bacteria | 4162 |
| 89 | Ga0466972_0006194 | 3300044658 | Bacteria | 6013 |
| 90 | Ga0466965_0005165 | 3300044683 | Bacteria | 5861 |
| 91 | Ga0466964_0007150 | 3300044706 | Bacteria | 4175 |
| 92 | Ga0466968_0042087 | 3300044735 | Bacteria | 1930 |
| 93 | Ga0466960_0000007 | 3300044901 | Bacteria | 69661 |
| 94 | Ga0466960_0038226 | 3300044901 | Bacteria | 2255 |
| 95 | Ga0451576_0002263 | 3300045051 | Bacteria | 29398 |
| 96 | Ga0451576_0006954 | 3300045051 | Bacteria | 13700 |
| 97 | Ga0451576_0007559 | 3300045051 | Bacteria | 12954 |
| 98 | Ga0451576_0043683 | 3300045051 | Bacteria | 4727 |
| 99 | Ga0451576_0082031 | 3300045051 | Bacteria | 3353 |
| 100 | Ga0495653_0008760 | 3300046463 | Bacteria | 8286 |
| 101 | Ga0495650_0000049 | 3300046471 | Bacteria | 325092 |
| 102 | Ga0495583_0000200 | 3300046506 | Bacteria | 100827 |
| 103 | Ga0495606_0007368 | 3300046507 | Bacteria | 9874 |
| 104 | Ga0495649_0000068 | 3300046694 | Bacteria | 92317 |
| 105 | Ga0495589_0020470 | 3300046794 | Bacteria | 3383 |
| 106 | Ga0496109_0000542 | 3300048912 | Bacteria | 31949 |
| 107 | Ga0496116_0000005 | 3300048919 | Bacteria | 827804 |
| 108 | Ga0496121_0000106 | 3300048924 | Bacteria | 191065 |
| 109 | Ga0501032_0047302 | 3300049569 | Bacteria | 2905 |
| 110 | Ga0501042_0008908 | 3300049578 | Bacteria | 6656 |
| 111 | Ga0501042_0023499 | 3300049578 | Bacteria | 4315 |
| 112 | Ga0501067_0020472 | 3300049583 | Bacteria | 3662 |
| 113 | Ga0501067_0021944 | 3300049583 | Bacteria | 3533 |
| 114 | Ga0501071_0031846 | 3300049587 | Bacteria | 3742 |
| 115 | Ga0501075_0013629 | 3300049591 | Bacteria | 5806 |
| 116 | Ga0501076_0041409 | 3300049592 | Bacteria | 3624 |
| 117 | Ga0501250_000587 | 3300049680 | Bacteria | 2554 |
| 118 | Ga0501257_005714 | 3300049686 | Bacteria | 2748 |
| 119 | Ga0501081_0026163 | 3300049743 | Bacteria | 3932 |
| 120 | Ga0501035_0000182 | 3300049822 | Bacteria | 76725 |
| 121 | Ga0501044_0063925 | 3300049823 | Bacteria | 3758 |
| 122 | Ga0501045_0066988 | 3300049824 | Bacteria | 2636 |
| 123 | nmdc:mga05p37_145555_c1 | 3300050507 | Bacteria | 2902 |
| 124 | nmdc:mga05p37_30815_c1 | 3300050507 | Bacteria | 6547 |
| 125 | nmdc:mga08y16_59499_c1 | 3300050511 | Bacteria | 3990 |
| 126 | nmdc:mga0n895_189657_c1 | 3300050512 | Unclassified | 2087 |
| 127 | nmdc:mga0n895_30067_c1 | 3300050512 | Bacteria | 5187 |
| 128 | Ga0500635_0000150 | 3300053080 | Bacteria | 39030 |
| 129 | Ga0500641_0006214 | 3300053096 | Bacteria | 4237 |
| 130 | Ga0500616_0000743 | 3300053153 | Bacteria | 37581 |
| 131 | Ga0500616_0002734 | 3300053153 | Bacteria | 14294 |
| 132 | 2525557756 | 2524614729 | Bacteria | 3091755 |
| 133 | 2617912779 | 2617270889 | Bacteria | 9064343 |
| 134 | 2630649348 | 2627854209 | Bacteria | 3093011 |
| 135 | 2644034219 | 2643221604 | Bacteria | 5014917 |
| 136 | 2644102405 | 2643221617 | Bacteria | 5139111 |
| 137 | 2644118067 | 2643221620 | Bacteria | 5134593 |
| 138 | 2738871441 | 2738541305 | Bacteria | 4910150 |
| 139 | 2812333646 | 2811994874 | Bacteria | 5367947 |
| 140 | 2831429856 | 2831426010 | Bacteria | 8662725 |
| 141 | 2848701499 | 2848694841 | Bacteria | 9205737 |
| 142 | 2849667002 | 2849660919 | Bacteria | 8251853 |
| 143 | 2857483540 | 2857481737 | Bacteria | 4761446 |
| 144 | 2886629097 | 2886627955 | Bacteria | 7618130 |
| 145 | 2913846688 | 2913844669 | Bacteria | 8381711 |
| 146 | 2913852150 | 2913844669 | Bacteria | 8381711 |
| 147 | 2913912624 | 2913912277 | Bacteria | 9037797 |
| 148 | 2913915513 | 2913912277 | Bacteria | 9037797 |
| 149 | 2913944246 | 2913939268 | Bacteria | 8559644 |
| 150 | 2998346010 | 2998344455 | Bacteria | 4222996 |
| 151 | 642601831 | 642555144 | Bacteria | 9059191 |
| 152 | 8033684652 | 8033684223 | Bacteria | 6906479 |
| 153 | Ga0307516_10009364 | |||
| 154 | rootH1_10019610 | |||
| 155 | Ga0055535_1001112 | |||
| 156 | Ga0055529_1000382 | |||
| 157 | Ga0070682_100001856 | |||
| 158 | Ga0070682_100006555 | |||
| 159 | Ga0070682_100027065 | |||
| 160 | Ga0070663_100001505 | |||
| 161 | Ga0070707_100024430 | |||
| 162 | Ga0070672_100001619 | |||
| 163 | Ga0068855_100002642 | |||
| 164 | Ga0068855_100066780 | |||
| 165 | Ga0068861_100006427 | |||
| 166 | Ga0075431_100147957 | |||
| 167 | Ga0075434_100035666 | |||
| 168 | Ga0105240_10074690 | |||
| 169 | Ga0105240_10103301 | |||
| 170 | Ga0111539_10001351 | |||
| 171 | Ga0114129_10000027 | |||
| 172 | Ga0114129_10226976 | |||
| 173 | Ga0105248_10000323 | |||
| 174 | Ga0105237_10053504 | |||
| 175 | Ga0105249_10018993 | |||
| 176 | Ga0157378_10080356 | |||
| 177 | Ga0163162_10052237 | |||
| 178 | Ga0157375_10091064 | |||
| 179 | Ga0213872_10000023 | |||
| 180 | Ga0213872_10000033 | |||
| 181 | Ga0213872_10001317 | |||
| 182 | Ga0213872_10004857 | |||
| 183 | Ga0213872_10045610 | |||
| 184 | Ga0209258_100683 | |||
| 185 | Ga0209677_101079 | |||
| 186 | Ga0209759_1001454 | |||
| 187 | Ga0209759_1002611 | |||
| 188 | Ga0209455_1000108 | |||
| 189 | Ga0207705_10030428 | |||
| 190 | Ga0207695_10154255 | |||
| 191 | Ga0207671_10044887 | |||
| 192 | Ga0207657_10031153 | |||
| 193 | Ga0207646_10055105 | |||
| 194 | Ga0207691_10000636 | |||
| 195 | Ga0207711_10005438 | |||
| 196 | Ga0207689_10022649 | |||
| 197 | Ga0207667_10001824 | |||
| 198 | Ga0207651_10000885 | |||
| 199 | Ga0207712_10026141 | |||
| 200 | Ga0207675_100005204 | |||
| 201 | Ga0207698_10004358 | |||
| 202 | Ga0265319_1006207 | |||
| 203 | Ga0265318_10000019 | |||
| 204 | Ga0265336_10000039 | |||
| 205 | Ga0265324_10000223 | |||
| 206 | Ga0265332_10000014 | |||
| 207 | Ga0265332_10000076 | |||
| 208 | Ga0265320_10031261 | |||
| 209 | Ga0265329_10001645 | |||
| 210 | Ga0265331_10000775 | |||
| 211 | Ga0265313_10041379 | |||
| 212 | Ga0307508_10001805 | |||
| 213 | Ga0265342_10000347 | |||
| 214 | Ga0316576_10001110 | |||
| 215 | Ga0316576_10014099 | |||
| 216 | Ga0316578_10003117 | |||
| 217 | Ga0316578_10022655 | |||
| 218 | Ga0307516_10012165 | |||
| 219 | Ga0316577_10009565 | |||
| 220 | Ga0307413_10003615 | |||
| 221 | Ga0307407_10026178 | |||
| 222 | Ga0307415_100051144 | |||
| 223 | Ga0316580_10002225 | |||
| 224 | Ga0316574_0000049 | |||
| 225 | Ga0316574_0002216 | |||
| 226 | Ga0373933_0063579 | |||
| 227 | Ga0316582_0005423 | |||
| 228 | Ga0316584_0001063 | |||
| 229 | Ga0395900_0027699 | |||
| 230 | Ga0436365_1901632 | |||
| 231 | Ga0436361_0060434 | |||
| 232 | Ga0436361_0083965 | |||
| 233 | Ga0436361_0130561 | |||
| 234 | Ga0436361_0453247 | |||
| 235 | Ga0436361_0883184 | |||
| 236 | Ga0451797_0725596 | |||
| 237 | Ga0451807_0407619 | |||
| 238 | Ga0451807_0902201 | |||
| 239 | Ga0451853_0361019 | |||
| 240 | Ga0451853_0565616 | |||
| 241 | Ga0466972_0006194 | |||
| 242 | Ga0466965_0005165 | |||
| 243 | Ga0466964_0007150 | |||
| 244 | Ga0466968_0042087 | |||
| 245 | Ga0466960_0000007 | |||
| 246 | Ga0466960_0038226 | |||
| 247 | Ga0451576_0002263 | |||
| 248 | Ga0451576_0006954 | |||
| 249 | Ga0451576_0007559 | |||
| 250 | Ga0451576_0043683 | |||
| 251 | Ga0451576_0082031 | |||
| 252 | Ga0495653_0008760 | |||
| 253 | Ga0495650_0000049 | |||
| 254 | Ga0495583_0000200 | |||
| 255 | Ga0495606_0007368 | |||
| 256 | Ga0495649_0000068 | |||
| 257 | Ga0495589_0020470 | |||
| 258 | Ga0496109_0000542 | |||
| 259 | Ga0496116_0000005 | |||
| 260 | Ga0496121_0000106 | |||
| 261 | Ga0501032_0047302 | |||
| 262 | Ga0501042_0008908 | |||
| 263 | Ga0501042_0023499 | |||
| 264 | Ga0501067_0020472 | |||
| 265 | Ga0501067_0021944 | |||
| 266 | Ga0501071_0031846 | |||
| 267 | Ga0501075_0013629 | |||
| 268 | Ga0501076_0041409 | |||
| 269 | Ga0501250_000587 | |||
| 270 | Ga0501257_005714 | |||
| 271 | Ga0501081_0026163 | |||
| 272 | Ga0501035_0000182 | |||
| 273 | Ga0501044_0063925 | |||
| 274 | Ga0501045_0066988 | |||
| 275 | nmdc:mga05p37_145555_c1 | |||
| 276 | nmdc:mga05p37_30815_c1 | |||
| 277 | nmdc:mga08y16_59499_c1 | |||
| 278 | nmdc:mga0n895_189657_c1 | |||
| 279 | nmdc:mga0n895_30067_c1 | |||
| 280 | Ga0500635_0000150 | |||
| 281 | Ga0500641_0006214 | |||
| 282 | Ga0500616_0000743 | |||
| 283 | Ga0500616_0002734 | |||
| 284 | 2525557756 | |||
| 285 | 2617912779 | |||
| 286 | 2630649348 | |||
| 287 | 2644034219 | |||
| 288 | 2644102405 | |||
| 289 | 2644118067 | |||
| 290 | 2738871441 | |||
| 291 | 2812333646 | |||
| 292 | 2831429856 | |||
| 293 | 2848701499 | |||
| 294 | 2849667002 | |||
| 295 | 2857483540 | |||
| 296 | 2886629097 | |||
| 297 | 2913846688 | |||
| 298 | 2913852150 | |||
| 299 | 2913912624 | |||
| 300 | 2913915513 | |||
| 301 | 2913944246 | |||
| 302 | 2998346010 | |||
| 303 | 642601831 | |||
| 304 | 8033684652 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2fgk-assembly2.cif.gz_B | crystal structure of the abc-cassette e631q mutant of hlyb with bound atp | 0.9653 | 350 | 588 |
| 3vx4-assembly1.cif.gz_A | crystal structure of the nucleotide-binding domain of s. mutans coma, a bifunctional atp-binding cassette transporter involved in the quorum-sensing pathway | 0.9511 | 345 | 584 |
| 2fgk-assembly2.cif.gz_B | crystal structure of the abc-cassette e631q mutant of hlyb with bound atp | 0.9497 | 350 | 588 |
| 5eum-assembly1.cif.gz_B | 1.8 angstrom crystal structure of atp-binding component of fused lipid transporter subunits of abc superfamily from haemophilus influenzae. | 0.9476 | 336 | 588 |
| 2ghi-assembly4.cif.gz_D | crystal structure of plasmodium yoelii multidrug resistance protein 2 | 0.9448 | 346 | 588 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_O53645_932_1184_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9773 | 338 | 589 | 3.40.50.300 |
| af_Q19015_1020_1270_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9745 | 372 | 589 | 3.40.50.300 |
| af_O53645_329_572_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9735 | 349 | 584 | 3.40.50.300 |
| af_P0AAG5_335_579_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.966 | 347 | 590 | 3.40.50.300 |
| af_Q2FVJ2_326_574_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9623 | 347 | 592 | 3.40.50.300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A355UHJ3-F1-model_v4 | Antibiotic ABC transporter ATP-binding protein | 0.9804 | 459 | 588 |
GO:0005524
GO:0015421 GO:0016887 GO:0090374 |
| AF-A0A7Y4NIU2-F1-model_v4 | ATP-binding cassette domain-containing protein | 0.9721 | 397 | 589 |
GO:0005524
GO:0015421 GO:0016887 GO:0090374 |
| AF-S8DPT3-F1-model_v4 | ABC transporter domain-containing protein | 0.966 | 425 | 583 |
GO:0005524
GO:0005743 GO:0015421 GO:0016887 GO:0090374 |
| AF-A0A355UHJ3-F1-model_v4 | Antibiotic ABC transporter ATP-binding protein | 0.9587 | 459 | 588 |
GO:0005524
GO:0015421 GO:0016887 GO:0090374 |
| AF-A0A7X7APY4-F1-model_v4 | ATP-binding cassette domain-containing protein | 0.9583 | 471 | 591 |
GO:0005524
GO:0015421 GO:0016887 |