F214901

General Info

Members Datasets Scaffolds Average Seq Length
152 117 304 441

Family's Representative Sequence

Representative Sequence 3300037312|Ga0395899_0001564|Ga0395899_0001564_3947_5515
Length 504
Sequence MDTRFQHLTHAHGHDVFLKVGSKIRSEIAEALRCEAGTVATPCADWIREYVLHSGSSSANATRQNPKIIAVSPVPTGLLDLHNTREALRRGRTSAAAEIEKSIAIAQSGACERAFLKPAFDEARRAAAAPAAAQRPLMGLAVSIKDLFDVRGQVTAAGSVVLADAPAAEEDCPAVARLRSAGAAVLGRTNMSEFAFSGVGTNPHFGTPAGGSSSGAAVTVASGAAFIGLGSDTGGSIRIPAALTGVVGFKNTARLVPTEGALPLSTTLDTVCAMTRSVRDAILAHEILSGQAVKLADAPLSGFRFALARTAMLDGLDDTVARAFDRALRTLRDAGAAIEEIDLDAIRLGGFSAVESYAWHRELLARAGKGYDPRVRFRIERGASIKAFEYIDLIRARHEWIARVIDALQGFDAVLSPTVPIVAPPIAQVAPGAERDQEFFRVNALLLRNTSVVNMLDGCAISIPCHAPGELPVGLMIWQSAMHDDTVLNIARQAEAALATTTLP

Samples

Sample ID Description Type Environment
1 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
2 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
6 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
7 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
8 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
9 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
10 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
11 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
12 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
13 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
14 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
15 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
16 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
17 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
18 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
19 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
20 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
21 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
22 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
23 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
29 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
30 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
31 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
32 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
33 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
34 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
35 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
36 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
37 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
38 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
40 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
41 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
42 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
43 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
44 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
45 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
46 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
47 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
49 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
50 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
51 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
54 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
66 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
67 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
68 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
69 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
70 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
71 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
72 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
73 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
74 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
75 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
76 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
77 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
78 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
79 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
80 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
81 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
82 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
83 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
84 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
85 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
86 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
87 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
88 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
89 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
90 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
91 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
92 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
93 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
94 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
95 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
96 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
97 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
98 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
99 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
100 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
101 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
102 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
105 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
106 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
107 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
108 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
109 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
110 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
111 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
112 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
113 2511231002 Polaromonas sp. CF318 Isolate Rhizosphere
114 2547132374 Acidovorax radicis N35 Isolate Unclassified
115 2643221717 Acidovorax sp. Root267 Isolate Unclassified
116 2738543013 Variovorax sp. BT01 Isolate Unclassified
117 2842747753 Variovorax sp. R-72060 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.71
Metatranscriptomes 0
Isolates 3.29

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 40.13
Nodule 0
Rhizoplane 0.66
Rhizosphere 48.03
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395899_0001564 3300037312 Bacteria 19269
2 JGI25155J39150_1000081 3300002704 Bacteria 55520
3 JGI25156J39149_1000025 3300002705 Bacteria 136287
4 JGI25154J39366_1000045 3300002738 Bacteria 136302
5 JGI25157J39369_1000034 3300002741 Bacteria 136301
6 JGI25159J45721_1001857 3300002987 Bacteria 8444
7 JGI25160J50197_1001428 3300003354 Bacteria 11952
8 JGI25161J50226_1000111 3300003374 Bacteria 63577
9 Ga0055525_1000026 3300003759 Bacteria 345798
10 Ga0055526_1004715 3300003771 Bacteria 8087
11 Ga0055537_1000310 3300003773 Bacteria 33374
12 Ga0055524_1000075 3300003775 Bacteria 121897
13 Ga0055536_1001759 3300003781 Bacteria 12771
14 Ga0055534_1003315 3300003784 Bacteria 5103
15 Ga0055528_1000241 3300003790 Bacteria 45932
16 Ga0055530_10000686 3300003791 Bacteria 28715
17 Ga0055530_10004134 3300003791 Bacteria 7686
18 Ga0055540_1000033 3300003792 Bacteria 172048
19 Ga0055540_1013064 3300003792 Bacteria 2561
20 Ga0055531_10001016 3300003794 Bacteria 22237
21 Ga0055531_10001824 3300003794 Bacteria 15095
22 Ga0055543_1000276 3300004625 Bacteria 38135
23 Ga0065165_1004210 3300005262 Bacteria 9162
24 Ga0065165_1004520 3300005262 Bacteria 8533
25 Ga0070670_100080360 3300005331 Bacteria 2802
26 Ga0070660_100025875 3300005339 Bacteria 4365
27 Ga0070674_100017092 3300005356 Bacteria 4555
28 Ga0070674_100125352 3300005356 Bacteria 1906
29 Ga0070707_100058059 3300005468 Bacteria 3712
30 Ga0070679_100002865 3300005530 Bacteria 15676
31 Ga0068855_100030911 3300005563 Bacteria 6399
32 Ga0068855_100088646 3300005563 Bacteria 3574
33 Ga0068863_100081051 3300005841 Bacteria 3074
34 Ga0075365_10009140 3300006038 Bacteria 5677
35 Ga0075432_10009285 3300006058 Bacteria 3349
36 Ga0075367_10030936 3300006178 Bacteria 3072
37 Ga0075366_10003139 3300006195 Bacteria 8645
38 Ga0075430_100095845 3300006846 Bacteria 2480
39 Ga0105242_10017387 3300009176 Bacteria 5603
40 Ga0157370_10007910 3300013104 Bacteria 11516
41 Ga0182008_10073837 3300014497 Bacteria 1678
42 Ga0163161_10000105 3300017792 Bacteria 80620
43 Ga0163161_10001140 3300017792 Bacteria 19990
44 Ga0163161_10027327 3300017792 Bacteria 4047
45 Ga0209435_100001 3300025206 Bacteria 1424171
46 Ga0209563_100005 3300025230 Bacteria 1774893
47 Ga0207425_1003814 3300025245 Bacteria 4701
48 Ga0207425_1009438 3300025245 Bacteria 2424
49 Ga0209646_1000001 3300025246 Bacteria 3092932
50 Ga0209026_1000003 3300025250 Bacteria 1060571
51 Ga0209759_1000001 3300025256 Bacteria 2799452
52 Ga0209565_1000004 3300025263 Bacteria 983150
53 Ga0209565_1001146 3300025263 Bacteria 12766
54 Ga0209673_1000275 3300025273 Bacteria 96728
55 Ga0209130_1000129 3300025284 Bacteria 123096
56 Ga0209130_1000299 3300025284 Bacteria 60368
57 Ga0209675_1000124 3300025291 Bacteria 106099
58 Ga0209675_1000521 3300025291 Bacteria 28197
59 Ga0209675_1002326 3300025291 Bacteria 9825
60 Ga0209676_1000029 3300025292 Bacteria 520536
61 Ga0209676_1002150 3300025292 Bacteria 14919
62 Ga0209025_1010068 3300025294 Bacteria 6468
63 Ga0209025_1011533 3300025294 Bacteria 5806
64 Ga0209025_1018663 3300025294 Bacteria 3911
65 Ga0209564_1000605 3300025295 Bacteria 55905
66 Ga0209758_1008125 3300025297 Bacteria 6899
67 Ga0209050_1000003 3300025298 Bacteria 1609245
68 Ga0209050_1003449 3300025298 Bacteria 11637
69 Ga0209256_1000001 3300025299 Bacteria 2166974
70 Ga0207426_1000061 3300025302 Bacteria 362507
71 Ga0207426_1004858 3300025302 Bacteria 6366
72 Ga0209051_1000003 3300025303 Bacteria 1609245
73 Ga0209051_1000110 3300025303 Bacteria 153230
74 Ga0209257_1000012 3300025304 Bacteria 1111138
75 Ga0209257_1000018 3300025304 Bacteria 836016
76 Ga0209257_1000045 3300025304 Bacteria 484429
77 Ga0207695_10029139 3300025913 Bacteria 6108
78 Ga0207657_10025239 3300025919 Bacteria 5484
79 Ga0207650_10057158 3300025925 Bacteria 2901
80 Ga0207687_10097975 3300025927 Bacteria 2152
81 Ga0207669_10049582 3300025937 Bacteria 2503
82 Ga0207691_10143265 3300025940 Bacteria 2105
83 Ga0207667_10073924 3300025949 Bacteria 3541
84 Ga0207677_10008590 3300026023 Bacteria 5714
85 Ga0207641_10065894 3300026088 Bacteria 3099
86 Ga0307515_10002466 3300028794 Bacteria 40227
87 Ga0265332_10009632 3300031238 Bacteria 4309
88 Ga0265331_10036720 3300031250 Bacteria 2404
89 Ga0265327_10000043 3300031251 Bacteria 285108
90 Ga0307513_10000014 3300031456 Bacteria 303157
91 Ga0307513_10039626 3300031456 Bacteria 5221
92 Ga0307408_100000246 3300031548 Bacteria 56179
93 Ga0307514_10001019 3300031649 Bacteria 40708
94 Ga0265314_10010167 3300031711 Bacteria 7884
95 Ga0265342_10080645 3300031712 Bacteria 1880
96 Ga0307406_10004258 3300031901 Bacteria 7786
97 Ga0307406_10017193 3300031901 Bacteria 4210
98 Ga0307412_10110214 3300031911 Bacteria 1964
99 Ga0307412_10119930 3300031911 Bacteria 1892
100 Ga0395899_0012064 3300037312 Bacteria 6620
101 Ga0395899_0028870 3300037312 Bacteria 4175
102 Ga0395900_0008553 3300037418 Bacteria 10523
103 Ga0395900_0011209 3300037418 Bacteria 9167
104 Ga0395900_0013558 3300037418 Bacteria 8326
105 Ga0395900_0064536 3300037418 Bacteria 3762
106 Ga0395898_0007677 3300037466 Bacteria 11451
107 Ga0395905_0000126 3300037471 Bacteria 126035
108 Ga0395905_0009528 3300037471 Bacteria 9487
109 Ga0395905_0015111 3300037471 Bacteria 7347
110 Ga0395901_0017894 3300038443 Bacteria 7233
111 Ga0395901_0200086 3300038443 Bacteria 2094
112 Ga0439449_0002251 3300042007 Bacteria 7586
113 Ga0450898_000983 3300042134 Bacteria 3595
114 Ga0439446_0004830 3300042156 Bacteria 3436
115 Ga0439434_0008896 3300042435 Bacteria 2951
116 Ga0466969_0020680 3300044656 Bacteria 3406
117 Ga0466966_0040741 3300044684 Bacteria 2988
118 Ga0466961_0045931 3300044693 Bacteria 2794
119 Ga0453684_0225111 3300044712 Bacteria 2170
120 Ga0466968_0025807 3300044735 Bacteria 2408
121 Ga0466959_0078043 3300045049 Bacteria 2389
122 Ga0451576_0161329 3300045051 Bacteria 2340
123 Ga0495638_0012086 3300046460 Bacteria 5932
124 Ga0495616_0002423 3300046513 Bacteria 12409
125 Ga0495631_0002948 3300046518 Bacteria 9429
126 Ga0495663_0031397 3300046525 Bacteria 1578
127 Ga0495654_0007788 3300046530 Bacteria 5958
128 Ga0495621_0007528 3300046539 Bacteria 3228
129 Ga0495656_0028232 3300046615 Bacteria 2249
130 Ga0495625_0006182 3300046660 Bacteria 10724
131 Ga0495588_0036632 3300046674 Bacteria 2489
132 Ga0496101_0059783 3300048904 Bacteria 2763
133 Ga0496125_0011327 3300048928 Bacteria 8932
134 Ga0501037_0066532 3300049573 Bacteria 2625
135 Ga0501047_0070809 3300049581 Bacteria 3357
136 Ga0501035_0061488 3300049822 Bacteria 3342
137 nmdc:mga0k408_22481_c1 3300050493 Bacteria 3551
138 nmdc:mga0k408_380_c2 3300050493 Bacteria 20523
139 Ga0500644_0003246 3300053088 Bacteria 4022
140 Ga0500593_003326 3300053117 Bacteria 6053
141 Ga0500594_0009422 3300053118 Bacteria 2248
142 Ga0500628_008602 3300053129 Bacteria 1780
143 Ga0500658_0001763 3300053134 Bacteria 8530
144 Ga0500634_0018370 3300053161 Bacteria 3755
145 Ga0500645_002127 3300053730 Bacteria 9123
146 Ga0500645_002799 3300053730 Bacteria 7520
147 Ga0500645_013107 3300053730 Bacteria 2667
148 2511244097 2511231002 Bacteria 5042903
149 2548496909 2547132374 Bacteria 5530232
150 2644645587 2643221717 Bacteria 5676132
151 2739250827 2738543013 Bacteria 5618633
152 2842748524 2842747753 Bacteria 5578255
153 Ga0395899_0001564
154 JGI25155J39150_1000081
155 JGI25156J39149_1000025
156 JGI25154J39366_1000045
157 JGI25157J39369_1000034
158 JGI25159J45721_1001857
159 JGI25160J50197_1001428
160 JGI25161J50226_1000111
161 Ga0055525_1000026
162 Ga0055526_1004715
163 Ga0055537_1000310
164 Ga0055524_1000075
165 Ga0055536_1001759
166 Ga0055534_1003315
167 Ga0055528_1000241
168 Ga0055530_10000686
169 Ga0055530_10004134
170 Ga0055540_1000033
171 Ga0055540_1013064
172 Ga0055531_10001016
173 Ga0055531_10001824
174 Ga0055543_1000276
175 Ga0065165_1004210
176 Ga0065165_1004520
177 Ga0070670_100080360
178 Ga0070660_100025875
179 Ga0070674_100017092
180 Ga0070674_100125352
181 Ga0070707_100058059
182 Ga0070679_100002865
183 Ga0068855_100030911
184 Ga0068855_100088646
185 Ga0068863_100081051
186 Ga0075365_10009140
187 Ga0075432_10009285
188 Ga0075367_10030936
189 Ga0075366_10003139
190 Ga0075430_100095845
191 Ga0105242_10017387
192 Ga0157370_10007910
193 Ga0182008_10073837
194 Ga0163161_10000105
195 Ga0163161_10001140
196 Ga0163161_10027327
197 Ga0209435_100001
198 Ga0209563_100005
199 Ga0207425_1003814
200 Ga0207425_1009438
201 Ga0209646_1000001
202 Ga0209026_1000003
203 Ga0209759_1000001
204 Ga0209565_1000004
205 Ga0209565_1001146
206 Ga0209673_1000275
207 Ga0209130_1000129
208 Ga0209130_1000299
209 Ga0209675_1000124
210 Ga0209675_1000521
211 Ga0209675_1002326
212 Ga0209676_1000029
213 Ga0209676_1002150
214 Ga0209025_1010068
215 Ga0209025_1011533
216 Ga0209025_1018663
217 Ga0209564_1000605
218 Ga0209758_1008125
219 Ga0209050_1000003
220 Ga0209050_1003449
221 Ga0209256_1000001
222 Ga0207426_1000061
223 Ga0207426_1004858
224 Ga0209051_1000003
225 Ga0209051_1000110
226 Ga0209257_1000012
227 Ga0209257_1000018
228 Ga0209257_1000045
229 Ga0207695_10029139
230 Ga0207657_10025239
231 Ga0207650_10057158
232 Ga0207687_10097975
233 Ga0207669_10049582
234 Ga0207691_10143265
235 Ga0207667_10073924
236 Ga0207677_10008590
237 Ga0207641_10065894
238 Ga0307515_10002466
239 Ga0265332_10009632
240 Ga0265331_10036720
241 Ga0265327_10000043
242 Ga0307513_10000014
243 Ga0307513_10039626
244 Ga0307408_100000246
245 Ga0307514_10001019
246 Ga0265314_10010167
247 Ga0265342_10080645
248 Ga0307406_10004258
249 Ga0307406_10017193
250 Ga0307412_10110214
251 Ga0307412_10119930
252 Ga0395899_0012064
253 Ga0395899_0028870
254 Ga0395900_0008553
255 Ga0395900_0011209
256 Ga0395900_0013558
257 Ga0395900_0064536
258 Ga0395898_0007677
259 Ga0395905_0000126
260 Ga0395905_0009528
261 Ga0395905_0015111
262 Ga0395901_0017894
263 Ga0395901_0200086
264 Ga0439449_0002251
265 Ga0450898_000983
266 Ga0439446_0004830
267 Ga0439434_0008896
268 Ga0466969_0020680
269 Ga0466966_0040741
270 Ga0466961_0045931
271 Ga0453684_0225111
272 Ga0466968_0025807
273 Ga0466959_0078043
274 Ga0451576_0161329
275 Ga0495638_0012086
276 Ga0495616_0002423
277 Ga0495631_0002948
278 Ga0495663_0031397
279 Ga0495654_0007788
280 Ga0495621_0007528
281 Ga0495656_0028232
282 Ga0495625_0006182
283 Ga0495588_0036632
284 Ga0496101_0059783
285 Ga0496125_0011327
286 Ga0501037_0066532
287 Ga0501047_0070809
288 Ga0501035_0061488
289 nmdc:mga0k408_22481_c1
290 nmdc:mga0k408_380_c2
291 Ga0500644_0003246
292 Ga0500593_003326
293 Ga0500594_0009422
294 Ga0500628_008602
295 Ga0500658_0001763
296 Ga0500634_0018370
297 Ga0500645_002127
298 Ga0500645_002799
299 Ga0500645_013107
300 2511244097
301 2548496909
302 2644645587
303 2739250827
304 2842748524

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01425

Amidase

Amidase

98

488

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
1o9n-assembly1.cif.gz_B crystal structure of the k62a mutant of malonamidase e2 from bradyrhizobium japonicum 0.9074 8 444
1o9n-assembly1.cif.gz_B crystal structure of the k62a mutant of malonamidase e2 from bradyrhizobium japonicum 0.9012 8 444
1obk-assembly1.cif.gz_B crystal structure of the r158q mutant of malonamidase e2 from bradyrhizobium japonicum 0.8955 8 444
1obl-assembly1.cif.gz_B crystal structure of the s133a mutant of malonamidase e2 complexed with malonate from bradyrhizobium japonicum 0.895 8 444
1o9p-assembly1.cif.gz_B crystal structure of the s131a mutant of malonamidase e2 complexed with malonate from bradyrhizobium japonicum 0.8946 8 444
ID Description Score Start End Superfamily
af_Q8MMR8_155_618_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.893 13 444 3.90.1300.10
af_A0A0P0Y7J9_128_590_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8921 5 447 3.90.1300.10
af_Q5AK64_16_450_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8908 67 438 3.90.1300.10
af_Q58560_2_434_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8885 26 443 3.90.1300.10
1o9qA00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8863 8 444 3.90.1300.10
ID Description Score Start End GO Terms
AF-A0A4Q5UWP4-F1-model_v4 deleted 0.9891 292 448
AF-A0A3D1J6M4-F1-model_v4 Amidase (EC 3.5.1.4) 0.9825 174 443 GO:0004040
AF-A0A254TCB2-F1-model_v4 Amidase domain-containing protein 0.9824 217 443 GO:0003824
AF-A0A1S7RXP0-F1-model_v4 deleted 0.9703 117 443
AF-A0A520NP29-F1-model_v4 Amidase (EC 3.5.1.4) 0.9695 158 443 GO:0004040

Map