F215526

General Info

Members Datasets Scaffolds Average Seq Length
152 119 304 412

Family's Representative Sequence

Representative Sequence 3300049824|Ga0501045_0081849|Ga0501045_0081849_681_2015
Length 444
Sequence VPSPDLLSPLRRPAFRKLALSYAVNELGDWLGIVALSVLVFDRTDSALATTLLFIGTGFLPALLTPIVVARLERPPPRFVLPALYAGEAGAFGALALLADDFSLPMVVAVATIDGALALTAKSLTRSVSAAMLEPEGELRAGNAILNLAFTGGAAIGPVVAGAVVAAFGVQSALLLDAVSFYAIGWILLTARPLPHAEPEPGRLRDQVRAGIGYIRRNATLGRLMAAQAGAFVFFSAVIPIEVIFAKETLDAGDTGYGLLLGSWGGGMVVGSIIFAMLRRAPLPLLLFFSTLAVGAGYLGTAASETLAMACAASAVGGAGNGVQWVAVMSAVQELTVPTMQARVIGVLESIGSAMPGIGYVLGGLIATGFSPRATFLVAGVGVVAIVAIAAPLMGRTWPQDLSEAAAGDGPEPIDAEGEIMVQLIPAGRSGIPEGEAPTQSDRR

Samples

Sample ID Description Type Environment
1 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
2 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
3 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
4 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
14 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
15 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
16 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
17 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
18 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
19 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
20 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
21 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
22 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
23 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
26 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
33 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
34 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
35 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
54 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
55 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
56 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
57 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
58 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
59 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
60 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
61 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
62 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
63 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
64 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
65 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
66 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
67 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
68 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
69 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
70 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
71 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
72 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
73 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
74 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
75 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
76 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
77 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
78 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
79 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
80 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
81 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
82 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
83 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
84 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
85 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
86 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
87 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
88 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
89 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
90 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
91 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
92 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
93 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
94 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
95 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
96 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
97 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
98 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
99 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
100 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
101 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
102 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
103 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
104 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
106 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
107 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
108 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
109 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
110 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
111 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
112 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
113 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
114 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
115 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
116 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
117 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
118 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
119 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.95
Nodule 0
Rhizoplane 9.87
Rhizosphere 85.53
Stem 0
Stem Tuber 0
Unclassified 3.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501045_0081849 3300049824 Bacteria 2381
2 JGI24034J26672_10000111 3300002239 Bacteria 13336
3 JGI24742J22300_10000904 3300002244 Bacteria 4535
4 JGI25404J52841_10001376 3300003659 Bacteria 4254
5 Ga0070682_100069416 3300005337 Bacteria 2250
6 Ga0070691_10002607 3300005341 Bacteria 8049
7 Ga0070668_100034126 3300005347 Bacteria 3877
8 Ga0070674_100000103 3300005356 Bacteria 39432
9 Ga0070674_100153931 3300005356 Bacteria 1738
10 Ga0070673_100004922 3300005364 Bacteria 8505
11 Ga0070667_100006447 3300005367 Bacteria 9752
12 Ga0070711_100068376 3300005439 Unclassified 2496
13 Ga0070678_100006895 3300005456 Bacteria 6701
14 Ga0068867_100002206 3300005459 Bacteria 13664
15 Ga0070686_100190084 3300005544 Bacteria 1465
16 Ga0068852_100224988 3300005616 Bacteria 1786
17 Ga0068864_100000043 3300005618 Bacteria 162928
18 Ga0068866_10000014 3300005718 Bacteria 72482
19 Ga0068866_10023498 3300005718 Bacteria 2869
20 Ga0068863_100011846 3300005841 Bacteria 8428
21 Ga0068863_100130264 3300005841 Bacteria 2401
22 Ga0068858_100000088 3300005842 Bacteria 95138
23 Ga0068862_100002273 3300005844 Bacteria 17193
24 Ga0081455_10014184 3300005937 Bacteria 7825
25 Ga0081455_10042515 3300005937 Bacteria 3985
26 Ga0081538_10009872 3300005981 Bacteria 7892
27 Ga0081540_1000503 3300005983 Bacteria 38494
28 Ga0081539_10001679 3300005985 Bacteria 35825
29 Ga0081539_10001858 3300005985 Bacteria 33253
30 Ga0070715_10000011 3300006163 Bacteria 183857
31 Ga0068871_100119098 3300006358 Bacteria 2228
32 Ga0075433_10000057 3300006852 Bacteria 48581
33 Ga0075433_10005095 3300006852 Bacteria 10306
34 Ga0105242_10000708 3300009176 Bacteria 26091
35 Ga0105242_10061262 3300009176 Bacteria 3094
36 Ga0105249_10001722 3300009553 Bacteria 19141
37 Ga0157370_10035953 3300013104 Bacteria 4810
38 Ga0157369_10295429 3300013105 Bacteria 1686
39 Ga0157378_10042435 3300013297 Bacteria 4037
40 Ga0157375_10001783 3300013308 Bacteria 18453
41 Ga0157380_10000009 3300014326 Bacteria 142155
42 Ga0207642_10000001 3300025899 Bacteria 714030
43 Ga0207642_10038617 3300025899 Bacteria 2068
44 Ga0207685_10000001 3300025905 Bacteria 604473
45 Ga0207663_10022277 3300025916 Unclassified 3620
46 Ga0207686_10024260 3300025934 Bacteria 3512
47 Ga0207670_10101915 3300025936 Bacteria 2052
48 Ga0207669_10000115 3300025937 Bacteria 40041
49 Ga0207651_10002681 3300025960 Bacteria 8520
50 Ga0207712_10087546 3300025961 Bacteria 2284
51 Ga0207668_10032963 3300025972 Bacteria 3429
52 Ga0207703_10000725 3300026035 Bacteria 32432
53 Ga0207702_10352888 3300026078 Bacteria 1408
54 Ga0207641_10003183 3300026088 Bacteria 14696
55 Ga0207641_10113658 3300026088 Bacteria 2405
56 Ga0207648_10004859 3300026089 Bacteria 13700
57 Ga0207676_10000042 3300026095 Bacteria 163475
58 Ga0207674_10210489 3300026116 Bacteria 1893
59 Ga0207675_100091945 3300026118 Bacteria 2853
60 Ga0207683_10014177 3300026121 Bacteria 6792
61 Ga0268265_10000938 3300028380 Bacteria 26823
62 Ga0265319_1000091 3300028563 Bacteria 70394
63 Ga0265338_10006866 3300028800 Bacteria 14334
64 Ga0265331_10034462 3300031250 Bacteria 2497
65 Ga0307409_100008869 3300031995 Bacteria 6137
66 Ga0307415_100051571 3300032126 Bacteria 2793
67 Ga0307415_100056305 3300032126 Bacteria 2695
68 Ga0373937_0015973 3300036401 Bacteria 6658
69 Ga0316582_0140809 3300036647 Unclassified 1626
70 Ga0395901_0187008 3300038443 Bacteria 2172
71 Ga0395901_0438774 3300038443 Bacteria 1337
72 Ga0439450_010964 3300042008 Bacteria 1762
73 Ga0466969_0068851 3300044656 Bacteria 1705
74 Ga0466966_0031661 3300044684 Bacteria 3430
75 Ga0466961_0007456 3300044693 Bacteria 6960
76 Ga0466963_0024338 3300044694 Bacteria 3854
77 Ga0466971_0070407 3300044719 Bacteria 1588
78 Ga0466960_0000059 3300044901 Bacteria 36738
79 Ga0466960_0083326 3300044901 Bacteria 1616
80 Ga0466967_0084659 3300045976 Bacteria 2869
81 Ga0466967_0269485 3300045976 Bacteria 1631
82 Ga0466967_0322139 3300045976 Bacteria 1491
83 Ga0466967_0448892 3300045976 Bacteria 1260
84 Ga0495603_0047338 3300046455 Unclassified 2561
85 Ga0495629_0000552 3300046459 Bacteria 30604
86 Ga0495629_0008186 3300046459 Bacteria 7689
87 Ga0495629_0008320 3300046459 Bacteria 7626
88 Ga0495641_0026180 3300046461 Unclassified 2850
89 Ga0495653_0269544 3300046463 Bacteria 1122
90 Ga0495650_0000121 3300046471 Bacteria 183055
91 Ga0495596_0035884 3300046500 Bacteria 1965
92 Ga0495628_0000704 3300046516 Bacteria 30877
93 Ga0495628_0152681 3300046516 Bacteria 1758
94 Ga0495630_0000011 3300046517 Bacteria 232063
95 Ga0495630_0002090 3300046517 Bacteria 13893
96 Ga0495644_0000499 3300046523 Bacteria 16748
97 Ga0495652_0000003 3300046529 Bacteria 597094
98 Ga0495587_0015960 3300046536 Bacteria 4676
99 Ga0495587_0049437 3300046536 Bacteria 2489
100 Ga0495645_0010916 3300046543 Bacteria 6382
101 Ga0495667_0000421 3300046559 Bacteria 27190
102 Ga0495667_0010959 3300046559 Bacteria 6126
103 Ga0495656_0004977 3300046615 Bacteria 4577
104 Ga0495634_0000214 3300046642 Bacteria 53816
105 Ga0495634_0016405 3300046642 Bacteria 5299
106 Ga0495647_0000046 3300046681 Bacteria 35269
107 Ga0495647_0000711 3300046681 Bacteria 9898
108 Ga0495669_0004168 3300046684 Bacteria 5946
109 Ga0495624_0000258 3300046690 Bacteria 41999
110 Ga0495604_0000413 3300047317 Bacteria 38567
111 Ga0495674_0001786 3300047319 Bacteria 21206
112 Ga0495680_0003986 3300047322 Bacteria 14263
113 Ga0495680_0164864 3300047322 Bacteria 1607
114 Ga0495593_0081672 3300047673 Bacteria 1671
115 Ga0495602_0000570 3300048088 Bacteria 34302
116 Ga0496100_0000012 3300048903 Bacteria 182426
117 Ga0496101_0000010 3300048904 Bacteria 281990
118 Ga0496106_0000017 3300048909 Bacteria 181561
119 Ga0496107_0000012 3300048910 Bacteria 181629
120 Ga0496108_0023074 3300048911 Bacteria 5118
121 Ga0496109_0006548 3300048912 Bacteria 9806
122 Ga0496110_0011071 3300048913 Bacteria 7365
123 Ga0496110_0024921 3300048913 Bacteria 5105
124 Ga0496111_0004311 3300048914 Bacteria 8971
125 Ga0496111_0026513 3300048914 Bacteria 4094
126 Ga0496111_0188428 3300048914 Bacteria 1534
127 Ga0496112_0044802 3300048915 Bacteria 4335
128 Ga0496113_0309400 3300048916 Bacteria 1265
129 Ga0496115_0000263 3300048918 Bacteria 46550
130 Ga0496115_0023022 3300048918 Bacteria 4832
131 Ga0496124_0167664 3300048927 Bacteria 1705
132 Ga0501034_0004655 3300049571 Bacteria 15197
133 Ga0501068_0094901 3300049584 Bacteria 1844
134 Ga0501071_0067670 3300049587 Bacteria 2598
135 Ga0501081_0013321 3300049743 Bacteria 5409
136 nmdc:mga08y16_80812_c1 3300050511 Bacteria 3389
137 nmdc:mga0a205_2910_c1 3300050515 Bacteria 15147
138 Ga0495601_0004835 3300053077 Bacteria 7814
139 Ga0495612_0011521 3300053078 Bacteria 3565
140 Ga0495612_0027079 3300053078 Bacteria 2305
141 Ga0495655_0000004 3300053083 Bacteria 293683
142 Ga0495655_0001751 3300053083 Bacteria 3366
143 Ga0495595_0088688 3300053084 Bacteria 1482
144 Ga0495619_0000042 3300053085 Bacteria 112453
145 Ga0495619_0000061 3300053085 Bacteria 88943
146 Ga0495619_0046290 3300053085 Bacteria 2860
147 Ga0500566_0003138 3300053094 Bacteria 9872
148 Ga0500641_0001647 3300053096 Bacteria 7961
149 Ga0500556_0001667 3300053104 Bacteria 8614
150 Ga0500628_000004 3300053129 Bacteria 202098
151 Ga0500616_0006550 3300053153 Bacteria 7602
152 Ga0500616_0065840 3300053153 Bacteria 1862
153 Ga0501045_0081849
154 JGI24034J26672_10000111
155 JGI24742J22300_10000904
156 JGI25404J52841_10001376
157 Ga0070682_100069416
158 Ga0070691_10002607
159 Ga0070668_100034126
160 Ga0070674_100000103
161 Ga0070674_100153931
162 Ga0070673_100004922
163 Ga0070667_100006447
164 Ga0070711_100068376
165 Ga0070678_100006895
166 Ga0068867_100002206
167 Ga0070686_100190084
168 Ga0068852_100224988
169 Ga0068864_100000043
170 Ga0068866_10000014
171 Ga0068866_10023498
172 Ga0068863_100011846
173 Ga0068863_100130264
174 Ga0068858_100000088
175 Ga0068862_100002273
176 Ga0081455_10014184
177 Ga0081455_10042515
178 Ga0081538_10009872
179 Ga0081540_1000503
180 Ga0081539_10001679
181 Ga0081539_10001858
182 Ga0070715_10000011
183 Ga0068871_100119098
184 Ga0075433_10000057
185 Ga0075433_10005095
186 Ga0105242_10000708
187 Ga0105242_10061262
188 Ga0105249_10001722
189 Ga0157370_10035953
190 Ga0157369_10295429
191 Ga0157378_10042435
192 Ga0157375_10001783
193 Ga0157380_10000009
194 Ga0207642_10000001
195 Ga0207642_10038617
196 Ga0207685_10000001
197 Ga0207663_10022277
198 Ga0207686_10024260
199 Ga0207670_10101915
200 Ga0207669_10000115
201 Ga0207651_10002681
202 Ga0207712_10087546
203 Ga0207668_10032963
204 Ga0207703_10000725
205 Ga0207702_10352888
206 Ga0207641_10003183
207 Ga0207641_10113658
208 Ga0207648_10004859
209 Ga0207676_10000042
210 Ga0207674_10210489
211 Ga0207675_100091945
212 Ga0207683_10014177
213 Ga0268265_10000938
214 Ga0265319_1000091
215 Ga0265338_10006866
216 Ga0265331_10034462
217 Ga0307409_100008869
218 Ga0307415_100051571
219 Ga0307415_100056305
220 Ga0373937_0015973
221 Ga0316582_0140809
222 Ga0395901_0187008
223 Ga0395901_0438774
224 Ga0439450_010964
225 Ga0466969_0068851
226 Ga0466966_0031661
227 Ga0466961_0007456
228 Ga0466963_0024338
229 Ga0466971_0070407
230 Ga0466960_0000059
231 Ga0466960_0083326
232 Ga0466967_0084659
233 Ga0466967_0269485
234 Ga0466967_0322139
235 Ga0466967_0448892
236 Ga0495603_0047338
237 Ga0495629_0000552
238 Ga0495629_0008186
239 Ga0495629_0008320
240 Ga0495641_0026180
241 Ga0495653_0269544
242 Ga0495650_0000121
243 Ga0495596_0035884
244 Ga0495628_0000704
245 Ga0495628_0152681
246 Ga0495630_0000011
247 Ga0495630_0002090
248 Ga0495644_0000499
249 Ga0495652_0000003
250 Ga0495587_0015960
251 Ga0495587_0049437
252 Ga0495645_0010916
253 Ga0495667_0000421
254 Ga0495667_0010959
255 Ga0495656_0004977
256 Ga0495634_0000214
257 Ga0495634_0016405
258 Ga0495647_0000046
259 Ga0495647_0000711
260 Ga0495669_0004168
261 Ga0495624_0000258
262 Ga0495604_0000413
263 Ga0495674_0001786
264 Ga0495680_0003986
265 Ga0495680_0164864
266 Ga0495593_0081672
267 Ga0495602_0000570
268 Ga0496100_0000012
269 Ga0496101_0000010
270 Ga0496106_0000017
271 Ga0496107_0000012
272 Ga0496108_0023074
273 Ga0496109_0006548
274 Ga0496110_0011071
275 Ga0496110_0024921
276 Ga0496111_0004311
277 Ga0496111_0026513
278 Ga0496111_0188428
279 Ga0496112_0044802
280 Ga0496113_0309400
281 Ga0496115_0000263
282 Ga0496115_0023022
283 Ga0496124_0167664
284 Ga0501034_0004655
285 Ga0501068_0094901
286 Ga0501071_0067670
287 Ga0501081_0013321
288 nmdc:mga08y16_80812_c1
289 nmdc:mga0a205_2910_c1
290 Ga0495601_0004835
291 Ga0495612_0011521
292 Ga0495612_0027079
293 Ga0495655_0000004
294 Ga0495655_0001751
295 Ga0495595_0088688
296 Ga0495619_0000042
297 Ga0495619_0000061
298 Ga0495619_0046290
299 Ga0500566_0003138
300 Ga0500641_0001647
301 Ga0500556_0001667
302 Ga0500628_000004
303 Ga0500616_0006550
304 Ga0500616_0065840

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

224

427

0.89

PF05977

MFS_3

Transmembrane secretion effector

5

422

0.85

PF07690

MFS_1

Major Facilitator Superfamily

18

241

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
8ex5-assembly1.cif.gz_A human s1p transporter spns2 in an outward-facing open conformation (state 4) 0.7942 11 375
6s4m-assembly1.cif.gz_A crystal structure of the human organic anion transporter mfsd10 (tetran) 0.7861 12 371
6wik-assembly1.cif.gz_A cryo-em structure of slc40/ferroportin with fab in the presence of hepcidin 0.7808 13 380
7oix-assembly1.cif.gz_B structure of thermostable human mfsd2a in complex with thermostable human sync2 0.776 19 375
6kkj-assembly1.cif.gz_B crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward open conformation 0.7713 15 375
ID Description Score Start End Superfamily
af_O23203_10_235_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8504 13 184 1.20.1250.20
af_Q8IL62_16_233_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8482 14 184 1.20.1250.20
af_E9QCB4_45_231_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8443 15 186 1.20.1250.20
af_Q1W0R3_258_450_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8433 6 182 1.20.1250.20
af_A0A1D8PPX9_28_226_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8433 9 189 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A7C3XU80-F1-model_v4 MFS transporter 0.8647 9 220 GO:0005886
GO:0022857
AF-A0A419HQX5-F1-model_v4 MFS transporter 0.8622 10 380 GO:0005886
GO:0022857
AF-A0A7V1KYZ3-F1-model_v4 MFS transporter 0.8606 6 191 GO:0005886
AF-A0A4V2US03-F1-model_v4 Transmembrane secretion effector 0.8585 7 377 GO:0005886
GO:0022857
AF-A0A7C6FUL4-F1-model_v4 MFS transporter 0.8525 204 377 GO:0005886

Map