F215567

General Info

Members Datasets Scaffolds Average Seq Length
152 114 304 310

Family's Representative Sequence

Representative Sequence 3300053085|Ga0495619_0000001|Ga0495619_0000001_234787_235797
Length 336
Sequence LGWRPEPLTKKYKTLHPYRNGFLAMESEGMIEAVREGGLMPAGTPAVAMLSGGRDSVCLLDLAVRLLDADQVMALHVNYGLRDDSDADERHCAELCEALGVRLEVERPRRPEGPGNLQAWARDTRYAAAAGLAEDDAALIATGHTADDQVETILYRLASSPSRRALLGMRPRDGKLVRPLLGFTRAQTTTYCEQRGLAWRDDPSNAEGAYARNRIRQGLARSLADVHPAAAQNVLRTAELLRDEAEVLDALVAAELDGSGGSPRNTIELERLAELHPALRRLVVQQLADRAAGRPVAGAARHAEAVAALRRTGTAMLDLGGGVRAIAERGTLRAER

Samples

Sample ID Description Type Environment
1 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
14 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
15 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
16 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
17 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
18 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
19 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
20 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
21 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
23 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
24 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
25 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
26 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
27 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
28 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
29 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
30 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
50 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
51 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
52 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
53 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
54 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
55 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
56 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
57 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
58 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
59 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
60 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
61 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
62 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
63 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
64 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
65 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
66 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
67 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
68 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
69 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
70 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
71 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
72 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
73 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
74 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
75 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
76 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
77 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
78 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
79 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
80 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
81 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
82 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
83 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
84 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
85 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
86 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
87 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
88 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
89 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
90 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
91 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
92 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
93 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
94 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
95 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
96 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
97 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
98 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
99 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
100 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
101 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
102 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
103 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
104 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
105 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
106 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
107 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
109 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
110 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
111 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
112 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
113 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
114 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 10.53
Rhizosphere 89.47
Stem 0
Stem Tuber 0
Unclassified 0.66

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495619_0000001 3300053085 Bacteria 586054
2 Ga0070658_10102502 3300005327 Bacteria 2367
3 Ga0070683_100103672 3300005329 Bacteria 2681
4 Ga0070682_100000334 3300005337 Bacteria 32362
5 Ga0070691_10009369 3300005341 Bacteria 4470
6 Ga0070661_100000255 3300005344 Bacteria 43552
7 Ga0070668_100073878 3300005347 Bacteria 2659
8 Ga0070674_100000074 3300005356 Bacteria 46384
9 Ga0070688_100000537 3300005365 Bacteria 19177
10 Ga0070714_100151744 3300005435 Bacteria 2088
11 Ga0070710_10000008 3300005437 Bacteria 198148
12 Ga0070710_10047179 3300005437 Bacteria 2402
13 Ga0070678_100004446 3300005456 Bacteria 7957
14 Ga0070678_100409301 3300005456 Bacteria 1180
15 Ga0070685_10003031 3300005466 Bacteria 8563
16 Ga0070672_100000314 3300005543 Bacteria 27496
17 Ga0070686_100006633 3300005544 Bacteria 6443
18 Ga0068864_100000024 3300005618 Bacteria 252632
19 Ga0068866_10005236 3300005718 Bacteria 5343
20 Ga0068870_10105547 3300005840 Bacteria 1600
21 Ga0068858_100000017 3300005842 Bacteria 186913
22 Ga0070712_100225663 3300006175 Bacteria 1485
23 Ga0097621_100287724 3300006237 Bacteria 1448
24 Ga0075433_10000595 3300006852 Bacteria 24004
25 Ga0075433_10016947 3300006852 Bacteria 6021
26 Ga0105247_10000832 3300009101 Bacteria 23437
27 Ga0105243_10011409 3300009148 Bacteria 6724
28 Ga0105242_10012696 3300009176 Bacteria 6487
29 Ga0105239_10568329 3300010375 Bacteria 1292
30 Ga0157370_10043860 3300013104 Bacteria 4302
31 Ga0157370_10072974 3300013104 Bacteria 3238
32 Ga0157375_10000194 3300013308 Bacteria 56860
33 Ga0163161_10000103 3300017792 Bacteria 81496
34 Ga0163161_10137110 3300017792 Bacteria 1850
35 Ga0207692_10000006 3300025898 Bacteria 294686
36 Ga0207692_10065210 3300025898 Bacteria 1899
37 Ga0207710_10000096 3300025900 Bacteria 116063
38 Ga0207710_10028380 3300025900 Bacteria 2429
39 Ga0207643_10126010 3300025908 Bacteria 1520
40 Ga0207705_10022811 3300025909 Bacteria 4463
41 Ga0207693_10274565 3300025915 Bacteria 1321
42 Ga0207649_10000015 3300025920 Bacteria 245662
43 Ga0207659_10000268 3300025926 Bacteria 31760
44 Ga0207664_10072295 3300025929 Bacteria 2780
45 Ga0207644_10489149 3300025931 Bacteria 1014
46 Ga0207686_10184569 3300025934 Bacteria 1482
47 Ga0207669_10000002 3300025937 Bacteria 377651
48 Ga0207691_10000286 3300025940 Bacteria 49918
49 Ga0207661_10042715 3300025944 Bacteria 3575
50 Ga0207679_10043029 3300025945 Bacteria 3249
51 Ga0207668_10041939 3300025972 Bacteria 3096
52 Ga0207703_10000030 3300026035 Bacteria 199014
53 Ga0207641_10056061 3300026088 Bacteria 3348
54 Ga0207676_10000048 3300026095 Bacteria 147853
55 Ga0207683_10009023 3300026121 Bacteria 8496
56 Ga0207683_10469819 3300026121 Bacteria 1160
57 Ga0265337_1000282 3300028556 Bacteria 27585
58 Ga0265326_10000033 3300028558 Bacteria 91972
59 Ga0265319_1000037 3300028563 Bacteria 115642
60 Ga0265322_10000017 3300028654 Bacteria 114833
61 Ga0265336_10001223 3300028666 Bacteria 12183
62 Ga0265338_10000051 3300028800 Bacteria 211202
63 Ga0265324_10000479 3300029957 Bacteria 28017
64 Ga0265328_10001388 3300031239 Bacteria 11151
65 Ga0265320_10000010 3300031240 Bacteria 250501
66 Ga0265325_10014894 3300031241 Bacteria 4384
67 Ga0265329_10017882 3300031242 Bacteria 2432
68 Ga0265339_10040006 3300031249 Bacteria 2607
69 Ga0265331_10000505 3300031250 Bacteria 36592
70 Ga0265327_10000040 3300031251 Bacteria 291052
71 Ga0265316_10003339 3300031344 Bacteria 16267
72 Ga0265316_10219155 3300031344 Bacteria 1405
73 Ga0265314_10000803 3300031711 Bacteria 37303
74 Ga0373937_0053278 3300036401 Bacteria 3711
75 Ga0373937_0394304 3300036401 Bacteria 1313
76 Ga0466967_0000013 3300045976 Bacteria 103249
77 Ga0495592_0027432 3300046454 Bacteria 4318
78 Ga0495603_0000254 3300046455 Bacteria 28028
79 Ga0495603_0198770 3300046455 Bacteria 1158
80 Ga0495629_0007822 3300046459 Bacteria 7863
81 Ga0495629_0099824 3300046459 Bacteria 2026
82 Ga0495629_0102251 3300046459 Bacteria 1999
83 Ga0495638_0043634 3300046460 Bacteria 2828
84 Ga0495653_0089667 3300046463 Bacteria 2252
85 Ga0495653_0100800 3300046463 Bacteria 2093
86 Ga0495662_0006772 3300046476 Bacteria 5704
87 Ga0495608_0000071 3300046511 Bacteria 77182
88 Ga0495608_0001842 3300046511 Bacteria 15131
89 Ga0495608_0009173 3300046511 Bacteria 6915
90 Ga0495628_0004744 3300046516 Bacteria 11989
91 Ga0495628_0028166 3300046516 Bacteria 4567
92 Ga0495628_0037543 3300046516 Bacteria 3884
93 Ga0495652_0000009 3300046529 Bacteria 311000
94 Ga0495640_0028897 3300046533 Bacteria 3986
95 Ga0495640_0314993 3300046533 Bacteria 970
96 Ga0495586_0004257 3300046535 Bacteria 7654
97 Ga0495645_0022397 3300046543 Bacteria 4571
98 Ga0495667_0075756 3300046559 Bacteria 2189
99 Ga0495656_0000461 3300046615 Bacteria 13248
100 Ga0495634_0000728 3300046642 Bacteria 31906
101 Ga0495634_0002377 3300046642 Bacteria 15680
102 Ga0495625_0000552 3300046660 Bacteria 54805
103 Ga0495635_0000017 3300046663 Bacteria 195506
104 Ga0495635_0069138 3300046663 Bacteria 2421
105 Ga0495657_0000096 3300046675 Bacteria 77239
106 Ga0495647_0000002 3300046681 Bacteria 174959
107 Ga0495647_0087027 3300046681 Bacteria 1275
108 Ga0495613_0000067 3300046689 Bacteria 101960
109 Ga0495613_0282061 3300046689 Bacteria 1153
110 Ga0495604_0106509 3300047317 Bacteria 2051
111 Ga0495674_0000024 3300047319 Bacteria 141746
112 Ga0495676_0000265 3300047321 Bacteria 42376
113 Ga0495680_0047960 3300047322 Bacteria 3357
114 Ga0495675_0000036 3300047444 Bacteria 91842
115 Ga0495684_0054294 3300047471 Bacteria 3056
116 Ga0495602_0003577 3300048088 Bacteria 16090
117 Ga0495602_0047909 3300048088 Bacteria 3846
118 Ga0496100_0000019 3300048903 Bacteria 149995
119 Ga0496100_0002688 3300048903 Bacteria 9072
120 Ga0496101_0000005 3300048904 Bacteria 331455
121 Ga0496101_0021415 3300048904 Bacteria 4442
122 Ga0496102_0112240 3300048905 Bacteria 2542
123 Ga0496104_0002134 3300048907 Bacteria 17161
124 Ga0496105_0005891 3300048908 Bacteria 9347
125 Ga0496106_0000033 3300048909 Bacteria 131412
126 Ga0496107_0000004 3300048910 Bacteria 297680
127 Ga0496108_0000904 3300048911 Bacteria 23112
128 Ga0496109_0000369 3300048912 Bacteria 41635
129 Ga0496112_0000848 3300048915 Bacteria 21825
130 Ga0496113_0067067 3300048916 Bacteria 2720
131 Ga0496114_0000003 3300048917 Bacteria 630981
132 Ga0496115_0000022 3300048918 Bacteria 164224
133 Ga0496115_0000027 3300048918 Bacteria 145505
134 Ga0501042_0212359 3300049578 Bacteria 1396
135 Ga0501070_0023140 3300049586 Bacteria 5205
136 Ga0501070_0148695 3300049586 Bacteria 1933
137 Ga0501070_0309414 3300049586 Unclassified 1286
138 Ga0501072_0128501 3300049588 Bacteria 2019
139 Ga0501079_0186321 3300049741 Bacteria 1620
140 nmdc:mga0a205_16798_c1 3300050515 Bacteria 6854
141 nmdc:mga0a205_491_c1 3300050515 Bacteria 30978
142 Ga0495601_0051684 3300053077 Bacteria 2594
143 Ga0495601_0069170 3300053077 Bacteria 2252
144 Ga0495601_0136374 3300053077 Bacteria 1600
145 Ga0495601_0145607 3300053077 Bacteria 1546
146 Ga0495612_0013179 3300053078 Bacteria 3330
147 Ga0495612_0065706 3300053078 Bacteria 1507
148 Ga0495595_0000009 3300053084 Bacteria 193039
149 Ga0495619_0000124 3300053085 Bacteria 56387
150 Ga0495619_0000130 3300053085 Bacteria 55619
151 Ga0495619_0002165 3300053085 Bacteria 13016
152 Ga0495619_0023962 3300053085 Bacteria 3914
153 Ga0495619_0000001
154 Ga0070658_10102502
155 Ga0070683_100103672
156 Ga0070682_100000334
157 Ga0070691_10009369
158 Ga0070661_100000255
159 Ga0070668_100073878
160 Ga0070674_100000074
161 Ga0070688_100000537
162 Ga0070714_100151744
163 Ga0070710_10000008
164 Ga0070710_10047179
165 Ga0070678_100004446
166 Ga0070678_100409301
167 Ga0070685_10003031
168 Ga0070672_100000314
169 Ga0070686_100006633
170 Ga0068864_100000024
171 Ga0068866_10005236
172 Ga0068870_10105547
173 Ga0068858_100000017
174 Ga0070712_100225663
175 Ga0097621_100287724
176 Ga0075433_10000595
177 Ga0075433_10016947
178 Ga0105247_10000832
179 Ga0105243_10011409
180 Ga0105242_10012696
181 Ga0105239_10568329
182 Ga0157370_10043860
183 Ga0157370_10072974
184 Ga0157375_10000194
185 Ga0163161_10000103
186 Ga0163161_10137110
187 Ga0207692_10000006
188 Ga0207692_10065210
189 Ga0207710_10000096
190 Ga0207710_10028380
191 Ga0207643_10126010
192 Ga0207705_10022811
193 Ga0207693_10274565
194 Ga0207649_10000015
195 Ga0207659_10000268
196 Ga0207664_10072295
197 Ga0207644_10489149
198 Ga0207686_10184569
199 Ga0207669_10000002
200 Ga0207691_10000286
201 Ga0207661_10042715
202 Ga0207679_10043029
203 Ga0207668_10041939
204 Ga0207703_10000030
205 Ga0207641_10056061
206 Ga0207676_10000048
207 Ga0207683_10009023
208 Ga0207683_10469819
209 Ga0265337_1000282
210 Ga0265326_10000033
211 Ga0265319_1000037
212 Ga0265322_10000017
213 Ga0265336_10001223
214 Ga0265338_10000051
215 Ga0265324_10000479
216 Ga0265328_10001388
217 Ga0265320_10000010
218 Ga0265325_10014894
219 Ga0265329_10017882
220 Ga0265339_10040006
221 Ga0265331_10000505
222 Ga0265327_10000040
223 Ga0265316_10003339
224 Ga0265316_10219155
225 Ga0265314_10000803
226 Ga0373937_0053278
227 Ga0373937_0394304
228 Ga0466967_0000013
229 Ga0495592_0027432
230 Ga0495603_0000254
231 Ga0495603_0198770
232 Ga0495629_0007822
233 Ga0495629_0099824
234 Ga0495629_0102251
235 Ga0495638_0043634
236 Ga0495653_0089667
237 Ga0495653_0100800
238 Ga0495662_0006772
239 Ga0495608_0000071
240 Ga0495608_0001842
241 Ga0495608_0009173
242 Ga0495628_0004744
243 Ga0495628_0028166
244 Ga0495628_0037543
245 Ga0495652_0000009
246 Ga0495640_0028897
247 Ga0495640_0314993
248 Ga0495586_0004257
249 Ga0495645_0022397
250 Ga0495667_0075756
251 Ga0495656_0000461
252 Ga0495634_0000728
253 Ga0495634_0002377
254 Ga0495625_0000552
255 Ga0495635_0000017
256 Ga0495635_0069138
257 Ga0495657_0000096
258 Ga0495647_0000002
259 Ga0495647_0087027
260 Ga0495613_0000067
261 Ga0495613_0282061
262 Ga0495604_0106509
263 Ga0495674_0000024
264 Ga0495676_0000265
265 Ga0495680_0047960
266 Ga0495675_0000036
267 Ga0495684_0054294
268 Ga0495602_0003577
269 Ga0495602_0047909
270 Ga0496100_0000019
271 Ga0496100_0002688
272 Ga0496101_0000005
273 Ga0496101_0021415
274 Ga0496102_0112240
275 Ga0496104_0002134
276 Ga0496105_0005891
277 Ga0496106_0000033
278 Ga0496107_0000004
279 Ga0496108_0000904
280 Ga0496109_0000369
281 Ga0496112_0000848
282 Ga0496113_0067067
283 Ga0496114_0000003
284 Ga0496115_0000022
285 Ga0496115_0000027
286 Ga0501042_0212359
287 Ga0501070_0023140
288 Ga0501070_0148695
289 Ga0501070_0309414
290 Ga0501072_0128501
291 Ga0501079_0186321
292 nmdc:mga0a205_16798_c1
293 nmdc:mga0a205_491_c1
294 Ga0495601_0051684
295 Ga0495601_0069170
296 Ga0495601_0136374
297 Ga0495601_0145607
298 Ga0495612_0013179
299 Ga0495612_0065706
300 Ga0495595_0000009
301 Ga0495619_0000124
302 Ga0495619_0000130
303 Ga0495619_0002165
304 Ga0495619_0023962

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01171

ATP_bind_3

PP-loop family

46

218

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ni5-assembly1.cif.gz_A-2 structure of the mesj pp-atpase from escherichia coli 0.8191 5 311
3vrh-assembly1.cif.gz_A-2 crystal structure of ph0300 0.8187 2 218
6scy-assembly1.cif.gz_B u34-trna thiolase ncsa from methanococcus maripaludis with its [4fe-4s] cluster 0.8181 3 218
3a2k-assembly2.cif.gz_B crystal structure of tils complexed with trna 0.8127 1 308
1ni5-assembly1.cif.gz_A-2 structure of the mesj pp-atpase from escherichia coli 0.8073 5 311
ID Description Score Start End Superfamily
1ni5A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8797 8 225 3.40.50.620
af_Q2G0R2_4_228_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8737 19 224 3.40.50.620
af_K7LES9_77_324_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8623 19 221 3.40.50.620
af_P9WG53_6_202_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.855 1 200 3.40.50.620
1ni5A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8509 8 225 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A6J4S035-F1-model_v4 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) 0.9589 2 167 GO:0005524
GO:0005737
GO:0006400
GO:0032267
AF-A0A838FIV2-F1-model_v4 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) 0.9316 1 263 GO:0005524
GO:0005737
GO:0006400
GO:0016879
AF-A0A7T9HMY5-F1-model_v4 deleted 0.9266 2 221
AF-A0A812AEZ8-F1-model_v4 deleted 0.9241 108 226
AF-A0A838FIV2-F1-model_v4 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) 0.9213 1 263 GO:0005524
GO:0005737
GO:0006400
GO:0016879

Map