F217612

General Info

Members Datasets Scaffolds Average Seq Length
153 116 153 255

Family's Representative Sequence

Representative Sequence 3300039437|Ga0436365_1498078|Ga0436365_1498078_641_1498
Length 285
Sequence LCGFAQLREGEACYLSLGDYPMQMTDGTQMNILNLFCLEKRRALVTGGAKGLGRVMAQALAEAGAEVAVASRTLADCQTAAAEITASTGRRTFAAAADMTKAKDVERLKQEVEAGFGTVDILVNNAGINIRGNINELSEADFDAVMSANVKGPFLCARAFGPGMAERGWGRVINLGSILSVISIPGRVPYASSKAAVLGFTRTLALEWAARGVTVNAICPGPFATEMNLPLMNDPAKYQAFVAKIPAGRWGDLHEIAGAVVFLASDAASYVTGSALFVDGGWTAQ

Samples

Sample ID Description Type Environment
1 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
2 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
8 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
9 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
13 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
14 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
15 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
16 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
20 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
21 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
25 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
26 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
27 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
30 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
31 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
32 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
35 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
36 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
37 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
38 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
55 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
56 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
57 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
58 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
59 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
60 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
61 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
62 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
63 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
64 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
65 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
66 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
67 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
68 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
69 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
70 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
71 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
72 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
73 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
74 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
75 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
76 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
77 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
78 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
79 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
80 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
81 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
82 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
83 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
94 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
95 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
96 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
97 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
98 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
99 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
100 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
101 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
102 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
103 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
104 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
105 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
106 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
108 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
109 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
110 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
111 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
112 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
113 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
114 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
115 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
116 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.96
Nodule 0
Rhizoplane 1.31
Rhizosphere 80.39
Stem 0
Stem Tuber 0
Unclassified 16.34

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070676_10204963 3300005328 Bacteria 1295
2 Ga0070677_10095954 3300005333 Bacteria 1298
3 Ga0070680_100339359 3300005336 Bacteria 1277
4 Ga0070668_100118432 3300005347 Bacteria 2114
5 Ga0070673_100147134 3300005364 Bacteria 1992
6 Ga0070708_100254286 3300005445 Bacteria 1651
7 Ga0070663_100138161 3300005455 Bacteria 1857
8 Ga0070678_100415692 3300005456 Bacteria 1171
9 Ga0070685_10061391 3300005466 Bacteria 2201
10 Ga0070706_100364921 3300005467 Bacteria 1345
11 Ga0070698_100003699 3300005471 Bacteria 16783
12 Ga0070672_100284238 3300005543 Bacteria 1399
13 Ga0070686_100189903 3300005544 Unclassified 1465
14 Ga0070695_100018413 3300005545 Bacteria 4242
15 Ga0070693_100163866 3300005547 Bacteria 1418
16 Ga0068854_100231012 3300005578 Bacteria 1468
17 Ga0068856_100019284 3300005614 Bacteria 6621
18 Ga0068858_100257811 3300005842 Bacteria 1657
19 Ga0075365_10210463 3300006038 Bacteria 1363
20 Ga0068871_100383931 3300006358 Bacteria 1248
21 Ga0099795_10069478 3300007788 Unclassified 1326
22 Ga0105240_10475180 3300009093 Bacteria 1394
23 Ga0111539_10165051 3300009094 Bacteria 2590
24 Ga0105243_10378149 3300009148 Bacteria 1309
25 Ga0105241_10083538 3300009174 Bacteria 2506
26 Ga0105248_10000006 3300009177 Bacteria 595060
27 Ga0105237_10482560 3300009545 Bacteria 1246
28 Ga0105249_10041213 3300009553 Bacteria 4197
29 Ga0105249_10063714 3300009553 Bacteria 3387
30 Ga0157371_10069778 3300013102 Bacteria 2488
31 Ga0157369_10152140 3300013105 Bacteria 2445
32 Ga0157369_10355392 3300013105 Bacteria 1521
33 Ga0157374_10239988 3300013296 Bacteria 1782
34 Ga0157378_10326800 3300013297 Bacteria 1491
35 Ga0157372_10125484 3300013307 Unclassified 2951
36 Ga0157372_10277223 3300013307 Bacteria 1949
37 Ga0157379_10270412 3300014968 Bacteria 1545
38 Ga0213876_10000953 3300021384 Bacteria 19009
39 Ga0213876_10001618 3300021384 Bacteria 13779
40 Ga0213876_10105247 3300021384 Bacteria 1497
41 Ga0213875_10000006 3300021388 Bacteria 579005
42 Ga0213875_10002229 3300021388 Bacteria 11776
43 Ga0213875_10058526 3300021388 Bacteria 1804
44 Ga0213871_10024537 3300021441 Bacteria 1528
45 Ga0207645_10112983 3300025907 Bacteria 1760
46 Ga0207707_10008118 3300025912 Bacteria 9114
47 Ga0207695_10074724 3300025913 Bacteria 3450
48 Ga0207671_10024098 3300025914 Bacteria 4580
49 Ga0207663_10083883 3300025916 Unclassified 2095
50 Ga0207652_10384554 3300025921 Bacteria 1266
51 Ga0207646_10425272 3300025922 Bacteria 1199
52 Ga0207700_10728990 3300025928 Bacteria 885
53 Ga0207711_10000064 3300025941 Bacteria 120779
54 Ga0207711_10639328 3300025941 Bacteria 993
55 Ga0207667_10225135 3300025949 Unclassified 1921
56 Ga0207668_10118526 3300025972 Bacteria 2000
57 Ga0207703_10016475 3300026035 Bacteria 5763
58 Ga0207703_10586789 3300026035 Bacteria 1053
59 Ga0207678_10014044 3300026067 Bacteria 7042
60 Ga0207702_10023109 3300026078 Bacteria 5156
61 Ga0207675_100027651 3300026118 Bacteria 5282
62 Ga0207683_10286992 3300026121 Bacteria 1504
63 Ga0207428_10132126 3300027907 Bacteria 1909
64 Ga0307515_10029179 3300028794 Bacteria 9339
65 Ga0307408_100292394 3300031548 Bacteria 1361
66 Ga0316578_10160485 3300031728 Bacteria 1355
67 Ga0307412_10338600 3300031911 Bacteria 1203
68 Ga0307409_100225209 3300031995 Bacteria 1696
69 Ga0373941_0002272 3300035115 Bacteria 4206
70 Ga0373942_0000123 3300035207 Bacteria 18152
71 Ga0373962_0001634 3300035242 Bacteria 5323
72 Ga0373931_0211645 3300035691 Bacteria 1163
73 Ga0373927_0000381 3300035695 Bacteria 34330
74 Ga0373947_0000130 3300035725 Bacteria 38607
75 Ga0373925_0000217 3300037068 Bacteria 62720
76 Ga0373925_0277933 3300037068 Bacteria 1348
77 Ga0395900_0035652 3300037418 Bacteria 5125
78 Ga0436364_0139220 3300037853 Bacteria 2856
79 Ga0436364_0345471 3300037853 Bacteria 5510
80 Ga0436364_0478514 3300037853 Bacteria 578677
81 Ga0436364_0630510 3300037853 Bacteria 2045
82 Ga0436364_0934719 3300037853 Unclassified 1150
83 Ga0436364_1022766 3300037853 Bacteria 78417
84 Ga0436364_1264448 3300037853 Bacteria 5035
85 Ga0436364_1558322 3300037853 Bacteria 5690
86 Ga0436365_0219192 3300039437 Bacteria 103034
87 Ga0436365_0435291 3300039437 Bacteria 1138
88 Ga0436365_0947079 3300039437 Bacteria 6876
89 Ga0436365_1025971 3300039437 Bacteria 1309
90 Ga0436365_1319823 3300039437 Bacteria 15171
91 Ga0436365_1498078 3300039437 Bacteria 1795
92 Ga0436365_1637060 3300039437 Bacteria 1450
93 Ga0436360_0771101 3300039438 Bacteria 1805
94 Ga0436361_0705252 3300039447 Unclassified 2750
95 Ga0436361_0818013 3300039447 Bacteria 2707
96 Ga0436363_0253597 3300039450 Bacteria 1060
97 Ga0436363_1028419 3300039450 Bacteria 1503
98 Ga0436363_1275266 3300039450 Bacteria 14268
99 Ga0450894_002829 3300042131 Bacteria 2302
100 Ga0450896_000198 3300042133 Bacteria 5231
101 Ga0466967_0146805 3300045976 Unclassified 2201
102 Ga0495630_0236514 3300046517 Bacteria 1396
103 Ga0495586_0193872 3300046535 Bacteria 1151
104 Ga0495621_0001482 3300046539 Bacteria 6087
105 Ga0495621_0005472 3300046539 Bacteria 3652
106 Ga0495656_0249489 3300046615 Unclassified 896
107 Ga0495658_0059627 3300046683 Bacteria 2186
108 Ga0496112_0034029 3300048915 Bacteria 4958
109 Ga0496113_0083872 3300048916 Bacteria 2446
110 Ga0501031_0003787 3300049568 Bacteria 9737
111 Ga0501034_0033656 3300049571 Bacteria 5197
112 Ga0501036_0004372 3300049572 Bacteria 11403
113 Ga0501037_0007686 3300049573 Bacteria 7891
114 Ga0501038_0002803 3300049574 Bacteria 16230
115 Ga0501039_0011940 3300049575 Bacteria 6620
116 Ga0501043_0004990 3300049579 Bacteria 10736
117 Ga0501043_0011253 3300049579 Bacteria 7006
118 Ga0501046_0000733 3300049580 Bacteria 31696
119 Ga0501047_0064839 3300049581 Bacteria 3523
120 Ga0501047_0115168 3300049581 Unclassified 2570
121 Ga0501047_0115470 3300049581 Bacteria 2566
122 Ga0501048_0016266 3300049582 Bacteria 5483
123 Ga0501067_0012936 3300049583 Bacteria 4618
124 Ga0501068_0033575 3300049584 Bacteria 3055
125 Ga0501069_0001960 3300049585 Bacteria 10281
126 Ga0501070_0013653 3300049586 Bacteria 6843
127 Ga0501072_0005592 3300049588 Bacteria 9564
128 Ga0501073_0017420 3300049589 Bacteria 5204
129 Ga0501073_0124753 3300049589 Unclassified 1785
130 Ga0501074_0034587 3300049590 Bacteria 3662
131 Ga0501074_0201652 3300049590 Bacteria 1418
132 Ga0501076_0054094 3300049592 Bacteria 3181
133 Ga0501077_0127476 3300049593 Bacteria 1613
134 Ga0501249_016427 3300049679 Unclassified 1590
135 Ga0501079_0001752 3300049741 Bacteria 15470
136 Ga0501080_0000015 3300049742 Bacteria 98057
137 Ga0501083_0047229 3300049744 Bacteria 2909
138 Ga0501035_0031142 3300049822 Bacteria 4858
139 Ga0501035_0086934 3300049822 Bacteria 2755
140 Ga0501044_0001457 3300049823 Bacteria 27761
141 Ga0501044_0002296 3300049823 Bacteria 21789
142 Ga0501044_0064948 3300049823 Bacteria 3723
143 Ga0501044_0092320 3300049823 Bacteria 3053
144 nmdc:mga0yw44_66174_c1 3300050492 Bacteria 2229
145 nmdc:mga09592_192071_c1 3300050508 Bacteria 1767
146 nmdc:mga0qj67_25300_c1 3300050509 Unclassified 4585
147 nmdc:mga06r32_267637_c1 3300050510 Bacteria 1696
148 nmdc:mga08y16_125402_c1 3300050511 Bacteria 2671
149 nmdc:mga08y16_68842_c1 3300050511 Bacteria 3690
150 nmdc:mga0n895_687031_c1 3300050512 Bacteria 1020
151 Ga0500595_027160 3300053119 Bacteria 1963
152 Ga0501084_0002217 3300054114 Bacteria 15594
153 Ga0501082_0022642 3300060353 Bacteria 5411

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300042131 Ga0450894_002829 Ga0450894_002829_731_1537 222
2 3300042133 Ga0450896_000198 Ga0450896_000198_1692_2498 222
3 3300025941 Ga0207711_10639328 Ga0207711_106393281 234
4 3300026035 Ga0207703_10586789 Ga0207703_105867892 234
5 3300027907 Ga0207428_10132126 Ga0207428_101321262 235
6 3300050511 nmdc:mga08y16_68842_c1 nmdc:mga08y16_68842_c1_1309_2067 235
7 3300005364 Ga0070673_100147134 Ga0070673_1001471342 236
8 3300050508 nmdc:mga09592_192071_c1 nmdc:mga09592_192071_c1_316_1074 236
9 3300050511 nmdc:mga08y16_125402_c1 nmdc:mga08y16_125402_c1_254_1012 236
10 3300046683 Ga0495658_0059627 Ga0495658_0059627_1360_2118 237
11 3300037068 Ga0373925_0277933 Ga0373925_0277933_528_1286 238
12 3300039450 Ga0436363_0253597 Ga0436363_0253597_137_895 238
13 3300021388 Ga0213875_10000006 Ga0213875_10000006236 240
14 3300035242 Ga0373962_0001634 Ga0373962_0001634_2868_3641 240
15 3300037853 Ga0436364_0478514 Ga0436364_0478514_272811_273593 240
16 3300039447 Ga0436361_0705252 Ga0436361_0705252_1564_2322 240
17 3300035695 Ga0373927_0000381 Ga0373927_0000381_20473_21231 241
18 3300035725 Ga0373947_0000130 Ga0373947_0000130_24105_24863 241
19 3300037068 Ga0373925_0000217 Ga0373925_0000217_56225_56983 241
20 3300046517 Ga0495630_0236514 Ga0495630_0236514_626_1384 241
21 3300046535 Ga0495586_0193872 Ga0495586_0193872_44_802 241
22 3300039437 Ga0436365_1637060 Ga0436365_1637060_30_788 243
23 3300006038 Ga0075365_10210463 Ga0075365_102104632 244
24 3300021388 Ga0213875_10002229 Ga0213875_1000222910 244
25 3300025928 Ga0207700_10728990 Ga0207700_107289901 244
26 3300037853 Ga0436364_1022766 Ga0436364_1022766_19089_19868 244
27 3300050492 nmdc:mga0yw44_66174_c1 nmdc:mga0yw44_66174_c1_1414_2205 244
28 3300050510 nmdc:mga06r32_267637_c1 nmdc:mga06r32_267637_c1_426_1190 244
29 3300025949 Ga0207667_10225135 Ga0207667_102251352 247
30 3300046615 Ga0495656_0249489 Ga0495656_0249489_58_810 248
31 3300005842 Ga0068858_100257811 Ga0068858_1002578112 249
32 3300009177 Ga0105248_10000006 Ga0105248_1000000635 249
33 3300014968 Ga0157379_10270412 Ga0157379_102704122 249
34 3300025941 Ga0207711_10000064 Ga0207711_1000006432 249
35 3300053119 Ga0500595_027160 Ga0500595_027160_379_1134 249
36 3300005445 Ga0070708_100254286 Ga0070708_1002542862 250
37 3300005466 Ga0070685_10061391 Ga0070685_100613913 250
38 3300005467 Ga0070706_100364921 Ga0070706_1003649211 250
39 3300005471 Ga0070698_100003699 Ga0070698_1000036991 250
40 3300005544 Ga0070686_100189903 Ga0070686_1001899032 250
41 3300005545 Ga0070695_100018413 Ga0070695_1000184133 250
42 3300005547 Ga0070693_100163866 Ga0070693_1001638662 250
43 3300005578 Ga0068854_100231012 Ga0068854_1002310121 250
44 3300005614 Ga0068856_100019284 Ga0068856_1000192845 250
45 3300006358 Ga0068871_100383931 Ga0068871_1003839312 250
46 3300007788 Ga0099795_10069478 Ga0099795_100694782 250
47 3300009093 Ga0105240_10475180 Ga0105240_104751801 250
48 3300009094 Ga0111539_10165051 Ga0111539_101650513 250
49 3300013102 Ga0157371_10069778 Ga0157371_100697782 250
50 3300013105 Ga0157369_10355392 Ga0157369_103553922 250
51 3300013296 Ga0157374_10239988 Ga0157374_102399882 250
52 3300013297 Ga0157378_10326800 Ga0157378_103268002 250
53 3300013307 Ga0157372_10125484 Ga0157372_101254843 250
54 3300021384 Ga0213876_10000953 Ga0213876_1000095312 250
55 3300021384 Ga0213876_10001618 Ga0213876_1000161810 250
56 3300021441 Ga0213871_10024537 Ga0213871_100245372 250
57 3300025912 Ga0207707_10008118 Ga0207707_100081187 250
58 3300025916 Ga0207663_10083883 Ga0207663_100838832 250
59 3300025921 Ga0207652_10384554 Ga0207652_103845542 250
60 3300025922 Ga0207646_10425272 Ga0207646_104252721 250
61 3300026078 Ga0207702_10023109 Ga0207702_100231095 250
62 3300031728 Ga0316578_10160485 Ga0316578_101604852 250
63 3300035691 Ga0373931_0211645 Ga0373931_0211645_341_1099 250
64 3300037853 Ga0436364_1264448 Ga0436364_1264448_191_952 250
65 3300039437 Ga0436365_0219192 Ga0436365_0219192_46085_46843 250
66 3300039437 Ga0436365_0947079 Ga0436365_0947079_4830_5591 250
67 3300039437 Ga0436365_1319823 Ga0436365_1319823_9743_10507 250
68 3300039438 Ga0436360_0771101 Ga0436360_0771101_365_1126 250
69 3300039447 Ga0436361_0818013 Ga0436361_0818013_1790_2548 250
70 3300039450 Ga0436363_1275266 Ga0436363_1275266_12144_12902 250
71 3300045976 Ga0466967_0146805 Ga0466967_0146805_1005_1763 250
72 3300048915 Ga0496112_0034029 Ga0496112_0034029_657_1421 250
73 3300048916 Ga0496113_0083872 Ga0496113_0083872_690_1454 250
74 3300049679 Ga0501249_016427 Ga0501249_016427_549_1307 250
75 3300050509 nmdc:mga0qj67_25300_c1 nmdc:mga0qj67_25300_c1_3755_4513 250
76 3300050512 nmdc:mga0n895_687031_c1 nmdc:mga0n895_687031_c1_140_904 250
77 3300005336 Ga0070680_100339359 Ga0070680_1003393592 251
78 3300005347 Ga0070668_100118432 Ga0070668_1001184322 251
79 3300005455 Ga0070663_100138161 Ga0070663_1001381612 251
80 3300009545 Ga0105237_10482560 Ga0105237_104825602 251
81 3300009553 Ga0105249_10041213 Ga0105249_100412132 251
82 3300013105 Ga0157369_10152140 Ga0157369_101521403 251
83 3300013307 Ga0157372_10277223 Ga0157372_102772232 251
84 3300021384 Ga0213876_10105247 Ga0213876_101052472 251
85 3300021388 Ga0213875_10058526 Ga0213875_100585262 251
86 3300025914 Ga0207671_10024098 Ga0207671_100240983 251
87 3300025972 Ga0207668_10118526 Ga0207668_101185262 251
88 3300026067 Ga0207678_10014044 Ga0207678_100140444 251
89 3300026118 Ga0207675_100027651 Ga0207675_1000276514 251
90 3300028794 Ga0307515_10029179 Ga0307515_100291794 251
91 3300035115 Ga0373941_0002272 Ga0373941_0002272_2157_2930 251
92 3300035207 Ga0373942_0000123 Ga0373942_0000123_6617_7390 251
93 3300037418 Ga0395900_0035652 Ga0395900_0035652_3892_4662 251
94 3300037853 Ga0436364_0139220 Ga0436364_0139220_293_1066 251
95 3300037853 Ga0436364_0345471 Ga0436364_0345471_3200_3970 251
96 3300037853 Ga0436364_0630510 Ga0436364_0630510_883_1650 251
97 3300037853 Ga0436364_0934719 Ga0436364_0934719_63_830 251
98 3300037853 Ga0436364_1558322 Ga0436364_1558322_1054_1824 251
99 3300039437 Ga0436365_0435291 Ga0436365_0435291_29_799 251
100 3300039437 Ga0436365_1025971 Ga0436365_1025971_215_982 251
101 3300039437 Ga0436365_1498078 Ga0436365_1498078_641_1498 251
102 3300039450 Ga0436363_1028419 Ga0436363_1028419_580_1350 251
103 3300049568 Ga0501031_0003787 Ga0501031_0003787_8192_8962 251
104 3300049571 Ga0501034_0033656 Ga0501034_0033656_1338_2108 251
105 3300049572 Ga0501036_0004372 Ga0501036_0004372_785_1555 251
106 3300049573 Ga0501037_0007686 Ga0501037_0007686_3663_4433 251
107 3300049574 Ga0501038_0002803 Ga0501038_0002803_11263_12033 251
108 3300049575 Ga0501039_0011940 Ga0501039_0011940_4470_5240 251
109 3300049579 Ga0501043_0004990 Ga0501043_0004990_4357_5127 251
110 3300049579 Ga0501043_0011253 Ga0501043_0011253_6023_6907 251
111 3300049580 Ga0501046_0000733 Ga0501046_0000733_593_1363 251
112 3300049581 Ga0501047_0064839 Ga0501047_0064839_374_1141 251
113 3300049581 Ga0501047_0115168 Ga0501047_0115168_241_1125 251
114 3300049581 Ga0501047_0115470 Ga0501047_0115470_772_1542 251
115 3300049582 Ga0501048_0016266 Ga0501048_0016266_4437_5207 251
116 3300049583 Ga0501067_0012936 Ga0501067_0012936_2511_3281 251
117 3300049584 Ga0501068_0033575 Ga0501068_0033575_611_1381 251
118 3300049585 Ga0501069_0001960 Ga0501069_0001960_9364_10134 251
119 3300049586 Ga0501070_0013653 Ga0501070_0013653_2621_3505 251
120 3300049588 Ga0501072_0005592 Ga0501072_0005592_3633_4403 251
121 3300049589 Ga0501073_0017420 Ga0501073_0017420_1924_2694 251
122 3300049589 Ga0501073_0124753 Ga0501073_0124753_229_1113 251
123 3300049590 Ga0501074_0034587 Ga0501074_0034587_1153_1923 251
124 3300049590 Ga0501074_0201652 Ga0501074_0201652_101_985 251
125 3300049592 Ga0501076_0054094 Ga0501076_0054094_56_826 251
126 3300049593 Ga0501077_0127476 Ga0501077_0127476_823_1593 251
127 3300049741 Ga0501079_0001752 Ga0501079_0001752_2557_3327 251
128 3300049742 Ga0501080_0000015 Ga0501080_0000015_61593_62363 251
129 3300049744 Ga0501083_0047229 Ga0501083_0047229_803_1573 251
130 3300049822 Ga0501035_0031142 Ga0501035_0031142_630_1400 251
131 3300049822 Ga0501035_0086934 Ga0501035_0086934_1572_2339 251
132 3300049823 Ga0501044_0001457 Ga0501044_0001457_24837_25604 251
133 3300049823 Ga0501044_0002296 Ga0501044_0002296_748_1515 251
134 3300049823 Ga0501044_0064948 Ga0501044_0064948_2463_3230 251
135 3300049823 Ga0501044_0092320 Ga0501044_0092320_436_1320 251
136 3300054114 Ga0501084_0002217 Ga0501084_0002217_716_1486 251
137 3300060353 Ga0501082_0022642 Ga0501082_0022642_3587_4357 251
138 3300009174 Ga0105241_10083538 Ga0105241_100835382 252
139 3300009553 Ga0105249_10063714 Ga0105249_100637143 252
140 3300025913 Ga0207695_10074724 Ga0207695_100747241 252
141 3300026035 Ga0207703_10016475 Ga0207703_100164753 252
142 3300005328 Ga0070676_10204963 Ga0070676_102049632 254
143 3300005333 Ga0070677_10095954 Ga0070677_100959542 254
144 3300005456 Ga0070678_100415692 Ga0070678_1004156922 254
145 3300005543 Ga0070672_100284238 Ga0070672_1002842382 254
146 3300009148 Ga0105243_10378149 Ga0105243_103781492 254
147 3300025907 Ga0207645_10112983 Ga0207645_101129832 254
148 3300026121 Ga0207683_10286992 Ga0207683_102869922 254
149 3300031548 Ga0307408_100292394 Ga0307408_1002923942 254
150 3300031911 Ga0307412_10338600 Ga0307412_103386002 254
151 3300031995 Ga0307409_100225209 Ga0307409_1002252093 254
152 3300046539 Ga0495621_0001482 Ga0495621_0001482_3884_4648 254
153 3300046539 Ga0495621_0005472 Ga0495621_0005472_2720_3484 254

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

41

236

0.98

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

47

283

0.97

PF08659

KR

KR domain

42

225

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
4bmn-assembly1.cif.gz_D apo structure of short-chain alcohol dehydrogenase from ralstonia sp. dsm 6428 0.9669 5 251
4i5d-assembly1.cif.gz_A crystal structure of ralstonia sp. alcohol dehydrogenase in its apo form 0.9645 5 251
4bmn-assembly1.cif.gz_B apo structure of short-chain alcohol dehydrogenase from ralstonia sp. dsm 6428 0.9638 5 251
4fgs-assembly1.cif.gz_D crystal structure of a probable dehydrogenase protein 0.9622 7 250
4i5g-assembly1.cif.gz_C crystal structure of ralstonia sp. alcohol dehydrogenase mutant n15g, g37d, r38v, r39s, a86n, s88a 0.9615 5 250
ID Description Score Start End Superfamily
af_Q0JBH4_12_100_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9787 10 96 3.40.50.720
af_K7MUD1_29_120_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9649 10 92 3.40.50.720
3ftpC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9569 7 250 3.40.50.720
af_P0AET8_1_255_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9563 1 249 3.40.50.720
3cxrA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9554 4 252 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A0Q8QB60-F1-model_v4 3-oxoacyl-ACP reductase 0.9813 2 254 GO:0016616
AF-H1S4J0-F1-model_v4 Gluconate 5-dehydrogenase 0.9671 4 254 GO:0016616
GO:0030497
AF-A0A0Q8QB60-F1-model_v4 3-oxoacyl-ACP reductase 0.9662 2 254 GO:0016616
AF-A0A506UI80-F1-model_v4 SDR family oxidoreductase 0.9637 4 254 GO:0016491
AF-A0A4R6FZ00-F1-model_v4 deleted 0.9635 7 254

Feature Viewer

pLDDT pTM Quality
94.39 0.93 High
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Predicted Structure (AlphaFold2)

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