F217826

General Info

Members Datasets Scaffolds Average Seq Length
153 81 306 376

Family's Representative Sequence

Representative Sequence 3300046460|Ga0495638_0020921|Ga0495638_0020921_2061_3359
Length 432
Sequence MLLTAGGYGLTLLATLYALAALLCRARARRARPDQSRRLPVTVFKPLCGPEPRLEANLATLCEQAGPGCQLLFGVRDPLDPVIAVVERLMRRYPALDIALVVDPRVHGTNLKVSNLINMARSARNPWLVIADSDIAAGPGYLDKVTAPLADPEVGIVTCLYHGRPAGGFWTRLGALFIDTWFAPSVRVASALGSTAFGFGATIALRAETLRAIGGFEALRNRLADDFWLGELTRRQGLATVLSEVYVTTDVTEDDLGSLFSRERRWMKTIRSINPAGYAFSFITFTFPMLAAGLWLAPAWPNLAVACVGMAARLGLHWRRPAAGVPAPGHAALGPLRDCLLLAAWLSAFVGSTTRWRRHTLPVDRCARKTSSASKHLAARMYTNLKKRRSRAGGNPIFPAQPLRHPPAAARPKWGPRLRGDDEPRSANVHRS

Samples

Sample ID Description Type Environment
1 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003577 Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_32 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
4 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
5 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
6 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
7 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
8 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
9 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
10 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
11 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
12 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
13 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
14 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
15 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
16 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
17 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
18 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
19 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
20 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
21 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
22 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
23 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
24 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
25 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
26 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
27 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
28 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
29 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
30 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
31 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
32 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
33 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
34 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
35 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
36 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
37 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
38 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
39 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
40 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
41 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
42 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
43 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
44 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
45 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
46 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
47 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
48 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
49 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
50 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
51 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
52 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
53 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
54 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
55 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
56 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
57 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
58 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
59 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
60 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
61 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
62 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
63 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
64 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
65 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
66 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
67 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
68 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
69 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
70 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
71 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
72 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
73 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
74 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
75 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
76 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
77 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
78 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
79 2513237150 Cupriavidus taiwanensis STM6018 Isolate Nodule
80 2513237165 Cupriavidus neocaledonicus STM6070 Isolate Nodule
81 644736347 Cupriavidus taiwanensis LMG 19424 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 97.39
Metatranscriptomes 0.65
Isolates 1.96

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.31
Nodule 1.96
Rhizoplane 2.61
Rhizosphere 92.16
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495638_0020921 3300046460 Bacteria 4319
2 JGI25151J46595_10020781 3300003187 Bacteria 2762
3 Ga0007416J51690_1027257 3300003577 Bacteria 4924
4 Ga0070712_100065923 3300006175 Bacteria 2572
5 Ga0209025_1000151 3300025294 Bacteria 172081
6 Ga0207654_10006781 3300025911 Bacteria 5760
7 Ga0207698_10055855 3300026142 Bacteria 3046
8 Ga0265338_10000599 3300028800 Bacteria 63449
9 Ga0395899_0001219 3300037312 Bacteria 22520
10 Ga0395900_0000730 3300037418 Bacteria 43743
11 Ga0395898_0011328 3300037466 Bacteria 9270
12 Ga0395905_0042013 3300037471 Bacteria 4290
13 Ga0395905_0078748 3300037471 Bacteria 3089
14 Ga0395905_0180776 3300037471 Bacteria 1980
15 Ga0395901_0007645 3300038443 Bacteria 10907
16 Ga0466972_0048498 3300044658 Bacteria 2052
17 Ga0466970_0030315 3300044765 Bacteria 2852
18 Ga0466957_0060600 3300044842 Bacteria 2320
19 Ga0466957_0076057 3300044842 Bacteria 2084
20 Ga0466959_0014182 3300045049 Bacteria 5784
21 Ga0466959_0089697 3300045049 Bacteria 2209
22 Ga0495590_0002173 3300046457 Bacteria 8221
23 Ga0495590_0027649 3300046457 Bacteria 1989
24 Ga0495629_0012437 3300046459 Bacteria 6164
25 Ga0495653_0082155 3300046463 Bacteria 2379
26 Ga0495653_0203184 3300046463 Bacteria 1343
27 Ga0495653_0222390 3300046463 Bacteria 1268
28 Ga0495580_0273772 3300046472 Bacteria 1152
29 Ga0495582_0052589 3300046473 Bacteria 2246
30 Ga0495605_0006535 3300046474 Bacteria 6693
31 Ga0495584_0019864 3300046491 Bacteria 3413
32 Ga0495584_0037605 3300046491 Bacteria 2447
33 Ga0495584_0048646 3300046491 Bacteria 2137
34 Ga0495584_0170886 3300046491 Bacteria 1105
35 Ga0495585_0001421 3300046492 Bacteria 18833
36 Ga0495585_0002418 3300046492 Bacteria 13371
37 Ga0495585_0005221 3300046492 Bacteria 8232
38 Ga0495585_0019796 3300046492 Bacteria 3877
39 Ga0495585_0048094 3300046492 Bacteria 2372
40 Ga0495596_0003581 3300046500 Bacteria 7818
41 Ga0495596_0035073 3300046500 Bacteria 1990
42 Ga0495596_0042533 3300046500 Bacteria 1790
43 Ga0495607_0013814 3300046501 Bacteria 5277
44 Ga0495607_0041129 3300046501 Bacteria 2747
45 Ga0495583_0001580 3300046506 Bacteria 22480
46 Ga0495606_0001852 3300046507 Bacteria 26592
47 Ga0495606_0014384 3300046507 Bacteria 6182
48 Ga0495606_0129799 3300046507 Bacteria 1499
49 Ga0495616_0000035 3300046513 Bacteria 128636
50 Ga0495616_0017839 3300046513 Bacteria 3910
51 Ga0495616_0076177 3300046513 Bacteria 1612
52 Ga0495631_0000768 3300046518 Bacteria 20650
53 Ga0495631_0057525 3300046518 Bacteria 1692
54 Ga0495632_0024225 3300046519 Bacteria 3228
55 Ga0495643_0000334 3300046522 Bacteria 64400
56 Ga0495663_0020919 3300046525 Bacteria 1880
57 Ga0495666_0003030 3300046526 Bacteria 8435
58 Ga0495666_0003063 3300046526 Bacteria 8404
59 Ga0495666_0033390 3300046526 Bacteria 2513
60 Ga0495642_0002754 3300046528 Bacteria 7053
61 Ga0495642_0004393 3300046528 Bacteria 5474
62 Ga0495642_0023680 3300046528 Bacteria 2425
63 Ga0495642_0041210 3300046528 Bacteria 1878
64 Ga0495642_0064891 3300046528 Bacteria 1519
65 Ga0495642_0075861 3300046528 Bacteria 1411
66 Ga0495652_0019671 3300046529 Bacteria 6011
67 Ga0495654_0055620 3300046530 Bacteria 1915
68 Ga0495665_0000586 3300046531 Bacteria 18594
69 Ga0495665_0076274 3300046531 Bacteria 1764
70 Ga0495587_0013956 3300046536 Bacteria 5044
71 Ga0495609_0010972 3300046538 Bacteria 4328
72 Ga0495597_0002315 3300046542 Bacteria 12358
73 Ga0495597_0006042 3300046542 Bacteria 6305
74 Ga0495597_0006491 3300046542 Bacteria 6046
75 Ga0495597_0009998 3300046542 Bacteria 4659
76 Ga0495597_0042849 3300046542 Bacteria 2017
77 Ga0495622_0007313 3300046557 Bacteria 5127
78 Ga0495622_0033349 3300046557 Bacteria 2403
79 Ga0495633_0020984 3300046558 Bacteria 3273
80 Ga0495633_0027070 3300046558 Bacteria 2806
81 Ga0495633_0103238 3300046558 Bacteria 1323
82 Ga0495668_0006805 3300046616 Bacteria 7425
83 Ga0495668_0043848 3300046616 Bacteria 2486
84 Ga0495668_0051222 3300046616 Bacteria 2286
85 Ga0495668_0094316 3300046616 Bacteria 1638
86 Ga0495634_0020973 3300046642 Bacteria 4628
87 Ga0495611_0042710 3300046648 Bacteria 2025
88 Ga0495625_0062858 3300046660 Bacteria 2623
89 Ga0495635_0011207 3300046663 Bacteria 6285
90 Ga0495661_0000449 3300046665 Bacteria 43512
91 Ga0495661_0007230 3300046665 Bacteria 7743
92 Ga0495661_0045963 3300046665 Bacteria 2667
93 Ga0495661_0056004 3300046665 Bacteria 2361
94 Ga0495661_0067581 3300046665 Bacteria 2099
95 Ga0495588_0000880 3300046674 Bacteria 13268
96 Ga0495588_0054968 3300046674 Bacteria 2054
97 Ga0495588_0055230 3300046674 Bacteria 2049
98 Ga0495623_0064391 3300046679 Bacteria 2294
99 Ga0495623_0073583 3300046679 Bacteria 2124
100 Ga0495623_0098613 3300046679 Bacteria 1783
101 Ga0495646_0130083 3300046680 Bacteria 1418
102 Ga0495624_0001344 3300046690 Bacteria 19219
103 Ga0495624_0133932 3300046690 Bacteria 1519
104 Ga0495670_0010729 3300046691 Bacteria 4501
105 Ga0495670_0046686 3300046691 Bacteria 2163
106 Ga0495671_0015891 3300046692 Bacteria 4028
107 Ga0495649_0000653 3300046694 Bacteria 28254
108 Ga0495649_0111685 3300046694 Bacteria 1449
109 Ga0495589_0000131 3300046794 Bacteria 68535
110 Ga0495589_0016518 3300046794 Bacteria 3794
111 Ga0495589_0039690 3300046794 Bacteria 2352
112 Ga0495589_0087560 3300046794 Bacteria 1512
113 Ga0495600_0084113 3300046809 Bacteria 2076
114 Ga0495581_0042801 3300047315 Bacteria 2620
115 Ga0495604_0017171 3300047317 Bacteria 5789
116 Ga0495604_0042651 3300047317 Bacteria 3554
117 Ga0495674_0021719 3300047319 Bacteria 5933
118 Ga0495674_0250640 3300047319 Bacteria 1457
119 Ga0495672_0000513 3300047320 Bacteria 44547
120 Ga0495676_0000064 3300047321 Bacteria 81355
121 Ga0495676_0045381 3300047321 Bacteria 3578
122 Ga0495683_0004793 3300047323 Bacteria 7598
123 Ga0495683_0058124 3300047323 Bacteria 1921
124 Ga0495687_000052 3300047443 Bacteria 199186
125 Ga0495687_034802 3300047443 Bacteria 2271
126 Ga0495675_0071883 3300047444 Bacteria 2183
127 Ga0495677_0009668 3300047445 Bacteria 3556
128 Ga0495677_0018232 3300047445 Bacteria 2544
129 Ga0495677_0028713 3300047445 Bacteria 2022
130 Ga0495681_0000438 3300047470 Bacteria 31904
131 Ga0495681_0006547 3300047470 Bacteria 7632
132 Ga0495681_0015407 3300047470 Bacteria 4326
133 Ga0495681_0073876 3300047470 Bacteria 1539
134 Ga0495686_0019451 3300047472 Bacteria 4535
135 Ga0495593_0014532 3300047673 Bacteria 4474
136 Ga0495593_0022564 3300047673 Bacteria 3505
137 Ga0495626_0000066 3300048091 Bacteria 141280
138 Ga0495626_0014070 3300048091 Bacteria 4138
139 Ga0495626_0019212 3300048091 Bacteria 3418
140 Ga0495626_0026832 3300048091 Bacteria 2803
141 Ga0495626_0030926 3300048091 Bacteria 2580
142 Ga0495626_0043927 3300048091 Bacteria 2095
143 Ga0495626_0053553 3300048091 Bacteria 1856
144 Ga0496109_0003947 3300048912 Bacteria 12392
145 Ga0496113_0106369 3300048916 Bacteria 2179
146 Ga0496115_0006630 3300048918 Bacteria 8491
147 Ga0496115_0073291 3300048918 Bacteria 2779
148 Ga0496122_0002113 3300048925 Bacteria 29433
149 Ga0496123_0001047 3300048926 Bacteria 41783
150 Ga0496125_0002815 3300048928 Bacteria 21951
151 2513954927 2513237150 Bacteria 6553639
152 2514042803 2513237165 Bacteria 6771773
153 644751964 644736347 Bacteria 6476522
154 Ga0495638_0020921
155 JGI25151J46595_10020781
156 Ga0007416J51690_1027257
157 Ga0070712_100065923
158 Ga0209025_1000151
159 Ga0207654_10006781
160 Ga0207698_10055855
161 Ga0265338_10000599
162 Ga0395899_0001219
163 Ga0395900_0000730
164 Ga0395898_0011328
165 Ga0395905_0042013
166 Ga0395905_0078748
167 Ga0395905_0180776
168 Ga0395901_0007645
169 Ga0466972_0048498
170 Ga0466970_0030315
171 Ga0466957_0060600
172 Ga0466957_0076057
173 Ga0466959_0014182
174 Ga0466959_0089697
175 Ga0495590_0002173
176 Ga0495590_0027649
177 Ga0495629_0012437
178 Ga0495653_0082155
179 Ga0495653_0203184
180 Ga0495653_0222390
181 Ga0495580_0273772
182 Ga0495582_0052589
183 Ga0495605_0006535
184 Ga0495584_0019864
185 Ga0495584_0037605
186 Ga0495584_0048646
187 Ga0495584_0170886
188 Ga0495585_0001421
189 Ga0495585_0002418
190 Ga0495585_0005221
191 Ga0495585_0019796
192 Ga0495585_0048094
193 Ga0495596_0003581
194 Ga0495596_0035073
195 Ga0495596_0042533
196 Ga0495607_0013814
197 Ga0495607_0041129
198 Ga0495583_0001580
199 Ga0495606_0001852
200 Ga0495606_0014384
201 Ga0495606_0129799
202 Ga0495616_0000035
203 Ga0495616_0017839
204 Ga0495616_0076177
205 Ga0495631_0000768
206 Ga0495631_0057525
207 Ga0495632_0024225
208 Ga0495643_0000334
209 Ga0495663_0020919
210 Ga0495666_0003030
211 Ga0495666_0003063
212 Ga0495666_0033390
213 Ga0495642_0002754
214 Ga0495642_0004393
215 Ga0495642_0023680
216 Ga0495642_0041210
217 Ga0495642_0064891
218 Ga0495642_0075861
219 Ga0495652_0019671
220 Ga0495654_0055620
221 Ga0495665_0000586
222 Ga0495665_0076274
223 Ga0495587_0013956
224 Ga0495609_0010972
225 Ga0495597_0002315
226 Ga0495597_0006042
227 Ga0495597_0006491
228 Ga0495597_0009998
229 Ga0495597_0042849
230 Ga0495622_0007313
231 Ga0495622_0033349
232 Ga0495633_0020984
233 Ga0495633_0027070
234 Ga0495633_0103238
235 Ga0495668_0006805
236 Ga0495668_0043848
237 Ga0495668_0051222
238 Ga0495668_0094316
239 Ga0495634_0020973
240 Ga0495611_0042710
241 Ga0495625_0062858
242 Ga0495635_0011207
243 Ga0495661_0000449
244 Ga0495661_0007230
245 Ga0495661_0045963
246 Ga0495661_0056004
247 Ga0495661_0067581
248 Ga0495588_0000880
249 Ga0495588_0054968
250 Ga0495588_0055230
251 Ga0495623_0064391
252 Ga0495623_0073583
253 Ga0495623_0098613
254 Ga0495646_0130083
255 Ga0495624_0001344
256 Ga0495624_0133932
257 Ga0495670_0010729
258 Ga0495670_0046686
259 Ga0495671_0015891
260 Ga0495649_0000653
261 Ga0495649_0111685
262 Ga0495589_0000131
263 Ga0495589_0016518
264 Ga0495589_0039690
265 Ga0495589_0087560
266 Ga0495600_0084113
267 Ga0495581_0042801
268 Ga0495604_0017171
269 Ga0495604_0042651
270 Ga0495674_0021719
271 Ga0495674_0250640
272 Ga0495672_0000513
273 Ga0495676_0000064
274 Ga0495676_0045381
275 Ga0495683_0004793
276 Ga0495683_0058124
277 Ga0495687_000052
278 Ga0495687_034802
279 Ga0495675_0071883
280 Ga0495677_0009668
281 Ga0495677_0018232
282 Ga0495677_0028713
283 Ga0495681_0000438
284 Ga0495681_0006547
285 Ga0495681_0015407
286 Ga0495681_0073876
287 Ga0495686_0019451
288 Ga0495593_0014532
289 Ga0495593_0022564
290 Ga0495626_0000066
291 Ga0495626_0014070
292 Ga0495626_0019212
293 Ga0495626_0026832
294 Ga0495626_0030926
295 Ga0495626_0043927
296 Ga0495626_0053553
297 Ga0496109_0003947
298 Ga0496113_0106369
299 Ga0496115_0006630
300 Ga0496115_0073291
301 Ga0496122_0002113
302 Ga0496123_0001047
303 Ga0496125_0002815
304 2513954927
305 2514042803
306 644751964

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13641

Glyco_tranf_2_3

Glycosyltransferase like family 2

40

269

0.93

PF13632

Glyco_trans_2_3

Glycosyl transferase family group 2

127

350

0.92

PF13506

Glyco_transf_21

Glycosyl transferase family 21

94

268

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
6p61-assembly2.cif.gz_B structure of a glycosyltransferase from leptospira borgpetersenii serovar hardjo-bovis (strain jb197) 0.744 38 250
6p61-assembly2.cif.gz_B structure of a glycosyltransferase from leptospira borgpetersenii serovar hardjo-bovis (strain jb197) 0.7336 38 250
6p61-assembly3.cif.gz_C structure of a glycosyltransferase from leptospira borgpetersenii serovar hardjo-bovis (strain jb197) 0.7291 38 250
2z87-assembly3.cif.gz_B crystal structure of chondroitin polymerase from escherichia coli strain k4 (k4cp) complexed with udp-galnac and udp 0.7187 41 261
2z86-assembly1.cif.gz_B crystal structure of chondroitin polymerase from escherichia coli strain k4 (k4cp) complexed with udp-glcua and udp 0.7157 39 261
ID Description Score Start End Superfamily
af_Q5AMQ4_66_210_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9563 40 150 3.90.550.10
af_F1QNT4_83_310_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9219 30 255 3.90.550.10
af_F1QNT4_83_310_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8911 30 255 3.90.550.10
af_Q21054_95_328_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8802 22 249 3.90.550.10
af_Q9RQP9_29_257_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8631 39 255 3.90.550.10
ID Description Score Start End GO Terms
AF-E3NXM8-F1-model_v4 Ceramide glucosyltransferase (EC 2.4.1.80) (Glucosylceramide synthase) (UDP-glucose ceramide glucosyltransferase) (UDP-glucose:N-acylsphingosine D-glucosyltransferase) 0.9583 39 149 GO:0006679
GO:0008120
GO:0016020
AF-A0A383DLT0-F1-model_v4 Glycosyltransferase 2-like domain-containing protein 0.9498 38 172 GO:0006679
GO:0008120
GO:0016020
AF-A0A0S3U9H4-F1-model_v4 Glycosyl transferase, group 2 family protein, putative 0.9349 2 276 GO:0006679
GO:0008120
GO:0016020
AF-A0A7Y4UGA2-F1-model_v4 Glycosyltransferase 0.9305 1 253 GO:0006679
GO:0008120
GO:0016020
AF-A0A1W4UJ29-F1-model_v4 deleted 0.9234 2 220

Map