F217964

General Info

Members Datasets Scaffolds Average Seq Length
153 98 152 407

Family's Representative Sequence

Representative Sequence 3300047471|Ga0495684_0012981|Ga0495684_0012981_2729_4171
Length 480
Sequence VHRDFFRRAMRKIHLDRTRVAVSRAVASRCLGTPGLVREFSVFVRPNHESGVGSPRVEGRTGDSHRIRRMAVVRSFSALRPAGSVVAKVSAVPYDVVSTEEARQLAAGNPLSFLHVSRPEIDLPDGTDPHADAVYAKAAENFEKLKIAAPLHVEGDRALYVYRLRVGPHEQTGIAGCCSIDDYDRDVVRKHERTRRDKEDDRTKHMIALSAQTGPVFLTYRDDAAIDAVVQRVKRDPPLYDFSAPDGVAHTIWRVGPDRRDALTAAFELIDLLYIADGHHRAASASRAAAHYRSLSPADHQDSNEFDFFLAVLFPASQVRILAYNRAVKELNGKTPESVLDEVRRRFTVKEGAASTPSRRGEIAMYLAGRWYGLVPREAPSGSDDAIGSLDVSILQDRILSPVLGIKDIRTDKRIEFVGGIRGAAELERLVDSGAAAVAFSLYPVSVNELIAISDANEIMPPKSTWFEPKLRDGLLVHLI

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
4 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
5 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
16 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
17 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
31 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
35 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
39 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
40 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
41 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
42 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
50 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
51 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
52 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
55 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
56 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
57 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
58 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
59 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
60 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
61 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
62 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
63 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
64 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
65 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
66 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
67 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
68 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
69 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
70 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
71 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
72 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
73 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
74 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
75 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
76 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
81 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
82 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
83 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
84 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
85 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
86 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
87 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
88 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
89 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
90 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
91 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
92 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
93 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
94 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
95 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
96 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
97 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
98 8007375930 Clostridium sp. YIM B02565 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.69
Metatranscriptomes 0.65
Isolates 0.65

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.65
Nodule 0
Rhizoplane 0
Rhizosphere 92.81
Stem 0
Stem Tuber 0
Unclassified 6.54

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10002279 3300003203 Bacteria 9049
2 Ga0070690_100013386 3300005330 Bacteria 4845
3 Ga0070675_100062657 3300005354 Bacteria 3073
4 Ga0070703_10000338 3300005406 Bacteria 20858
5 Ga0070709_10000033 3300005434 Bacteria 116407
6 Ga0070713_100212691 3300005436 Bacteria 1751
7 Ga0070711_100000074 3300005439 Bacteria 56976
8 Ga0070705_100000024 3300005440 Bacteria 81144
9 Ga0070708_100006620 3300005445 Bacteria 9222
10 Ga0070708_100048936 3300005445 Bacteria 3739
11 Ga0070708_100053016 3300005445 Bacteria 3598
12 Ga0070706_100001790 3300005467 Bacteria 22251
13 Ga0070706_100044909 3300005467 Bacteria 4081
14 Ga0070706_100277515 3300005467 Unclassified 1564
15 Ga0070707_100000144 3300005468 Bacteria 67480
16 Ga0070707_100142299 3300005468 Bacteria 2334
17 Ga0070698_100103883 3300005471 Bacteria 2811
18 Ga0070699_100000065 3300005518 Bacteria 99352
19 Ga0070699_100127753 3300005518 Bacteria 2239
20 Ga0070697_100068359 3300005536 Bacteria 2908
21 Ga0070697_100180404 3300005536 Bacteria 1790
22 Ga0070695_100033623 3300005545 Bacteria 3209
23 Ga0070696_100000543 3300005546 Bacteria 23953
24 Ga0070696_100036634 3300005546 Bacteria 3383
25 Ga0070693_100009997 3300005547 Bacteria 4734
26 Ga0068857_100158757 3300005577 Bacteria 2051
27 Ga0068856_100184610 3300005614 Bacteria 2099
28 Ga0068858_100304555 3300005842 Bacteria 1521
29 Ga0068858_100329778 3300005842 Bacteria 1460
30 Ga0068860_100002064 3300005843 Bacteria 21156
31 Ga0068862_100109399 3300005844 Bacteria 2424
32 Ga0081455_10030357 3300005937 Bacteria 4910
33 Ga0081539_10000036 3300005985 Bacteria 296724
34 Ga0081539_10015615 3300005985 Bacteria 5505
35 Ga0075428_100075832 3300006844 Bacteria 3671
36 Ga0075431_100349369 3300006847 Bacteria 1487
37 Ga0075433_10002022 3300006852 Bacteria 15293
38 Ga0075433_10040035 3300006852 Bacteria 4055
39 Ga0075433_10062109 3300006852 Bacteria 3272
40 Ga0075433_10235744 3300006852 Bacteria 1624
41 Ga0075434_100003894 3300006871 Bacteria 13359
42 Ga0075434_100133242 3300006871 Bacteria 2504
43 Ga0075429_100095257 3300006880 Bacteria 2596
44 Ga0075436_100000357 3300006914 Bacteria 29195
45 Ga0075436_100038125 3300006914 Bacteria 3318
46 Ga0075436_100111133 3300006914 Bacteria 1913
47 Ga0075435_100051360 3300007076 Bacteria 3321
48 Ga0075435_100187149 3300007076 Bacteria 1751
49 Ga0111539_10002852 3300009094 Bacteria 22969
50 Ga0114129_10001309 3300009147 Bacteria 33260
51 Ga0114129_10005337 3300009147 Bacteria 18137
52 Ga0114129_10007764 3300009147 Bacteria 15259
53 Ga0114129_10009951 3300009147 Bacteria 13553
54 Ga0114129_10015921 3300009147 Bacteria 10695
55 Ga0114129_10080073 3300009147 Unclassified 4541
56 Ga0114129_10271037 3300009147 Bacteria 2271
57 Ga0105243_10028718 3300009148 Bacteria 4272
58 Ga0105241_10133250 3300009174 Unclassified 2014
59 Ga0105249_10000513 3300009553 Bacteria 35783
60 Ga0157370_10124123 3300013104 Bacteria 2411
61 Ga0163162_10000001 3300013306 Bacteria 751833
62 Ga0163162_10011664 3300013306 Bacteria 8568
63 Ga0157375_10356206 3300013308 Bacteria 1629
64 Ga0157380_10057943 3300014326 Bacteria 3087
65 Ga0157380_10136759 3300014326 Bacteria 2098
66 Ga0213876_10015499 3300021384 Unclassified 4034
67 Ga0209050_1004186 3300025298 Bacteria 9989
68 Ga0207653_10000375 3300025885 Bacteria 20918
69 Ga0207699_10000002 3300025906 Bacteria 662194
70 Ga0207684_10001811 3300025910 Bacteria 22376
71 Ga0207684_10010460 3300025910 Bacteria 8167
72 Ga0207684_10039681 3300025910 Bacteria 3992
73 Ga0207663_10000263 3300025916 Bacteria 22840
74 Ga0207646_10000298 3300025922 Bacteria 67489
75 Ga0207646_10091075 3300025922 Bacteria 2729
76 Ga0207646_10184715 3300025922 Bacteria 1883
77 Ga0207712_10000062 3300025961 Bacteria 135638
78 Ga0209983_1000122 3300027665 Bacteria 13777
79 Ga0209974_10000026 3300027876 Bacteria 34250
80 Ga0207428_10019956 3300027907 Bacteria 5708
81 Ga0268265_10017893 3300028380 Bacteria 4901
82 Ga0268264_10003733 3300028381 Bacteria 13079
83 Ga0268264_10227439 3300028381 Bacteria 1720
84 Ga0265323_10013936 3300028653 Bacteria 3196
85 Ga0265336_10000064 3300028666 Bacteria 98160
86 Ga0265324_10000001 3300029957 Bacteria 562975
87 Ga0265325_10000683 3300031241 Bacteria 24700
88 Ga0316577_10033948 3300031733 Bacteria 2851
89 Ga0316593_10004596 3300032168 Bacteria 3559
90 Ga0373935_0137635 3300035692 Bacteria 1647
91 Ga0373937_0189374 3300036401 Bacteria 1933
92 Ga0316584_0002673 3300036712 Bacteria 11374
93 Ga0395905_0085641 3300037471 Unclassified 2953
94 Ga0436365_0359932 3300039437 Bacteria 6732
95 Ga0436365_1642004 3300039437 Bacteria 4515
96 Ga0439460_0008765 3300042461 Bacteria 2558
97 Ga0453684_0246793 3300044712 Bacteria 2052
98 Ga0495580_0000462 3300046472 Bacteria 33735
99 Ga0495580_0005117 3300046472 Bacteria 10911
100 Ga0495580_0108624 3300046472 Bacteria 1926
101 Ga0495599_0048121 3300046678 Bacteria 2673
102 Ga0495647_0005154 3300046681 Bacteria 4279
103 Ga0495647_0019415 3300046681 Bacteria 2430
104 Ga0495600_0124012 3300046809 Bacteria 1680
105 Ga0495600_0165792 3300046809 Bacteria 1427
106 Ga0495684_0012981 3300047471 Bacteria 6432
107 Ga0495684_0085293 3300047471 Unclassified 2395
108 Ga0495684_0118522 3300047471 Bacteria 1995
109 Ga0496116_0002676 3300048919 Bacteria 18433
110 Ga0496122_0000040 3300048925 Bacteria 285095
111 Ga0496122_0000087 3300048925 Bacteria 207890
112 Ga0496125_0100511 3300048928 Bacteria 2132
113 Ga0496126_0000210 3300048929 Bacteria 131214
114 Ga0496126_0000938 3300048929 Bacteria 50225
115 Ga0501034_0012791 3300049571 Bacteria 8656
116 Ga0501040_0024503 3300049576 Bacteria 4050
117 Ga0501043_0036917 3300049579 Bacteria 3844
118 Ga0501048_0073631 3300049582 Bacteria 2411
119 Ga0501071_0024914 3300049587 Bacteria 4187
120 Ga0501071_0027981 3300049587 Bacteria 3969
121 Ga0501072_0019545 3300049588 Bacteria 5238
122 Ga0501074_0272202 3300049590 Bacteria 1204
123 Ga0501075_0013279 3300049591 Bacteria 5877
124 Ga0501075_0146024 3300049591 Bacteria 1803
125 Ga0501076_0008041 3300049592 Bacteria 7706
126 Ga0501076_0031513 3300049592 Bacteria 4135
127 Ga0501076_0051938 3300049592 Bacteria 3246
128 Ga0501080_0161964 3300049742 Bacteria 2066
129 Ga0501081_0024451 3300049743 Bacteria 4056
130 Ga0501081_0066224 3300049743 Bacteria 2512
131 nmdc:mga05p37_120125_c1 3300050507 Bacteria 3228
132 nmdc:mga05p37_185153_c1 3300050507 Bacteria 2532
133 nmdc:mga05p37_362283_c1 3300050507 Bacteria 1704
134 nmdc:mga05p37_3_c1 3300050507 Bacteria 172656
135 nmdc:mga05p37_4628_c1 3300050507 Bacteria 14963
136 nmdc:mga05p37_797_c1 3300050507 Bacteria 35111
137 nmdc:mga09592_125185_c1 3300050508 Bacteria 2209
138 nmdc:mga09592_53156_c1 3300050508 Unclassified 3419
139 nmdc:mga06r32_89570_c1 3300050510 Bacteria 3004
140 nmdc:mga0rr50_14320_c1 3300050513 Bacteria 5197
141 nmdc:mga0rr50_172805_c1 3300050513 Bacteria 1762
142 nmdc:mga08x19_2_c1 3300050514 Bacteria 741277
143 nmdc:mga08x19_56097_c1 3300050514 Bacteria 2541
144 nmdc:mga0a205_149703_c1 3300050515 Bacteria 2234
145 nmdc:mga0a205_4002_c1 3300050515 Bacteria 13177
146 Ga0501084_0049593 3300054114 Bacteria 3514
147 Ga0501084_0195951 3300054114 Bacteria 1704
148 Ga0590071_005368 3300059421 Bacteria 3084
149 Ga0590077_003030 3300059426 Bacteria 3520
150 Ga0501082_0055298 3300060353 Bacteria 3420
151 Ga0501082_0094006 3300060353 Bacteria 2590
152 Ga0530510_0002590 3300061734 Bacteria 12419

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009147 Ga0114129_10007764 Ga0114129_100077647 376
2 3300050507 nmdc:mga05p37_185153_c1 nmdc:mga05p37_185153_c1_479_1624 376
3 3300050513 nmdc:mga0rr50_14320_c1 nmdc:mga0rr50_14320_c1_1962_3107 376
4 3300049579 Ga0501043_0036917 Ga0501043_0036917_999_2156 378
5 3300005843 Ga0068860_100002064 Ga0068860_1000020648 379
6 3300028381 Ga0268264_10003733 Ga0268264_100037334 379
7 3300009174 Ga0105241_10133250 Ga0105241_101332502 381
8 3300039437 Ga0436365_1642004 Ga0436365_1642004_1612_2778 383
9 3300046809 Ga0495600_0124012 Ga0495600_0124012_330_1481 383
10 3300047471 Ga0495684_0118522 Ga0495684_0118522_133_1284 383
11 3300009148 Ga0105243_10028718 Ga0105243_100287184 384
12 3300013308 Ga0157375_10356206 Ga0157375_103562061 384
13 3300005536 Ga0070697_100180404 Ga0070697_1001804041 386
14 3300046678 Ga0495599_0048121 Ga0495599_0048121_1491_2651 386
15 3300046809 Ga0495600_0165792 Ga0495600_0165792_86_1246 386
16 3300047471 Ga0495684_0085293 Ga0495684_0085293_595_1755 386
17 3300049590 Ga0501074_0272202 Ga0501074_0272202_22_1194 386
18 3300005842 Ga0068858_100304555 Ga0068858_1003045551 393
19 3300028666 Ga0265336_10000064 Ga0265336_1000006445 393
20 3300029957 Ga0265324_10000001 Ga0265324_10000001441 393
21 3300031241 Ga0265325_10000683 Ga0265325_100006833 393
22 3300009094 Ga0111539_10002852 Ga0111539_1000285222 394
23 3300006844 Ga0075428_100075832 Ga0075428_1000758322 398
24 3300027907 Ga0207428_10019956 Ga0207428_100199562 398
25 iso_pu_bacteria 8007375930 8007379450 399
26 3300006852 Ga0075433_10002022 Ga0075433_100020228 401
27 3300006871 Ga0075434_100133242 Ga0075434_1001332422 401
28 3300009147 Ga0114129_10009951 Ga0114129_100099512 401
29 3300027665 Ga0209983_1000122 Ga0209983_10001224 401
30 3300027876 Ga0209974_10000026 Ga0209974_100000264 401
31 3300037471 Ga0395905_0085641 Ga0395905_0085641_622_1845 401
32 3300046681 Ga0495647_0019415 Ga0495647_0019415_35_1252 401
33 3300049582 Ga0501048_0073631 Ga0501048_0073631_620_1840 401
34 3300050507 nmdc:mga05p37_4628_c1 nmdc:mga05p37_4628_c1_5657_6877 401
35 3300050515 nmdc:mga0a205_4002_c1 nmdc:mga0a205_4002_c1_8173_9393 401
36 3300060353 Ga0501082_0055298 Ga0501082_0055298_1130_2350 401
37 3300005445 Ga0070708_100048936 Ga0070708_1000489363 402
38 3300005468 Ga0070707_100142299 Ga0070707_1001422992 402
39 3300005471 Ga0070698_100103883 Ga0070698_1001038834 402
40 3300005518 Ga0070699_100127753 Ga0070699_1001277532 402
41 3300006914 Ga0075436_100111133 Ga0075436_1001111332 402
42 3300007076 Ga0075435_100051360 Ga0075435_1000513604 402
43 3300013306 Ga0163162_10011664 Ga0163162_100116646 402
44 3300025910 Ga0207684_10010460 Ga0207684_100104606 402
45 3300025922 Ga0207646_10091075 Ga0207646_100910753 402
46 3300025922 Ga0207646_10184715 Ga0207646_101847152 402
47 3300032168 Ga0316593_10004596 Ga0316593_100045962 402
48 3300005354 Ga0070675_100062657 Ga0070675_1000626573 403
49 3300005842 Ga0068858_100329778 Ga0068858_1003297781 403
50 3300005844 Ga0068862_100109399 Ga0068862_1001093992 403
51 3300006847 Ga0075431_100349369 Ga0075431_1003493691 403
52 3300006852 Ga0075433_10235744 Ga0075433_102357442 403
53 3300006880 Ga0075429_100095257 Ga0075429_1000952572 403
54 3300009147 Ga0114129_10005337 Ga0114129_100053371 403
55 3300025298 Ga0209050_1004186 Ga0209050_10041868 403
56 3300028380 Ga0268265_10017893 Ga0268265_100178932 403
57 3300039437 Ga0436365_0359932 Ga0436365_0359932_4239_5471 403
58 3300046472 Ga0495580_0005117 Ga0495580_0005117_7036_8265 403
59 3300048925 Ga0496122_0000040 Ga0496122_0000040_62340_63581 403
60 3300048929 Ga0496126_0000210 Ga0496126_0000210_62340_63581 403
61 3300049587 Ga0501071_0024914 Ga0501071_0024914_1054_2289 403
62 3300049591 Ga0501075_0146024 Ga0501075_0146024_339_1574 403
63 3300049592 Ga0501076_0051938 Ga0501076_0051938_1941_3176 403
64 3300050508 nmdc:mga09592_125185_c1 nmdc:mga09592_125185_c1_210_1439 403
65 3300005434 Ga0070709_10000033 Ga0070709_1000003336 404
66 3300005436 Ga0070713_100212691 Ga0070713_1002126912 404
67 3300005439 Ga0070711_100000074 Ga0070711_10000007423 404
68 3300005577 Ga0068857_100158757 Ga0068857_1001587572 404
69 3300005614 Ga0068856_100184610 Ga0068856_1001846102 404
70 3300006852 Ga0075433_10062109 Ga0075433_100621094 404
71 3300006914 Ga0075436_100000357 Ga0075436_1000003576 404
72 3300006914 Ga0075436_100038125 Ga0075436_1000381252 404
73 3300007076 Ga0075435_100187149 Ga0075435_1001871491 404
74 3300009147 Ga0114129_10080073 Ga0114129_100800732 404
75 3300009147 Ga0114129_10271037 Ga0114129_102710372 404
76 3300009553 Ga0105249_10000513 Ga0105249_100005135 404
77 3300013306 Ga0163162_10000001 Ga0163162_10000001510 404
78 3300014326 Ga0157380_10057943 Ga0157380_100579433 404
79 3300025906 Ga0207699_10000002 Ga0207699_10000002557 404
80 3300025916 Ga0207663_10000263 Ga0207663_1000026315 404
81 3300025961 Ga0207712_10000062 Ga0207712_1000006278 404
82 3300048919 Ga0496116_0002676 Ga0496116_0002676_9691_10947 404
83 3300048925 Ga0496122_0000087 Ga0496122_0000087_176108_177358 404
84 3300048929 Ga0496126_0000938 Ga0496126_0000938_30760_32010 404
85 3300049571 Ga0501034_0012791 Ga0501034_0012791_4840_6075 404
86 3300050507 nmdc:mga05p37_120125_c1 nmdc:mga05p37_120125_c1_1539_2768 404
87 3300050507 nmdc:mga05p37_362283_c1 nmdc:mga05p37_362283_c1_463_1692 404
88 3300050508 nmdc:mga09592_53156_c1 nmdc:mga09592_53156_c1_1457_2686 404
89 3300050513 nmdc:mga0rr50_172805_c1 nmdc:mga0rr50_172805_c1_456_1685 404
90 3300050514 nmdc:mga08x19_2_c1 nmdc:mga08x19_2_c1_496238_497467 404
91 3300050514 nmdc:mga08x19_56097_c1 nmdc:mga08x19_56097_c1_888_2117 404
92 3300050515 nmdc:mga0a205_149703_c1 nmdc:mga0a205_149703_c1_18_1247 404
93 3300005330 Ga0070690_100013386 Ga0070690_1000133863 405
94 3300005406 Ga0070703_10000338 Ga0070703_1000033811 405
95 3300005440 Ga0070705_100000024 Ga0070705_1000000247 405
96 3300005445 Ga0070708_100006620 Ga0070708_1000066203 405
97 3300005445 Ga0070708_100053016 Ga0070708_1000530163 405
98 3300005467 Ga0070706_100001790 Ga0070706_10000179013 405
99 3300005467 Ga0070706_100044909 Ga0070706_1000449093 405
100 3300005467 Ga0070706_100277515 Ga0070706_1002775151 405
101 3300005468 Ga0070707_100000144 Ga0070707_10000014432 405
102 3300005518 Ga0070699_100000065 Ga0070699_10000006578 405
103 3300005536 Ga0070697_100068359 Ga0070697_1000683594 405
104 3300005545 Ga0070695_100033623 Ga0070695_1000336233 405
105 3300005546 Ga0070696_100000543 Ga0070696_1000005437 405
106 3300005546 Ga0070696_100036634 Ga0070696_1000366343 405
107 3300005547 Ga0070693_100009997 Ga0070693_1000099973 405
108 3300005937 Ga0081455_10030357 Ga0081455_100303573 405
109 3300005985 Ga0081539_10015615 Ga0081539_100156154 405
110 3300006852 Ga0075433_10040035 Ga0075433_100400353 405
111 3300006871 Ga0075434_100003894 Ga0075434_1000038944 405
112 3300009147 Ga0114129_10001309 Ga0114129_1000130914 405
113 3300009147 Ga0114129_10015921 Ga0114129_100159218 405
114 3300013104 Ga0157370_10124123 Ga0157370_101241233 405
115 3300014326 Ga0157380_10136759 Ga0157380_101367592 405
116 3300021384 Ga0213876_10015499 Ga0213876_100154992 405
117 3300025885 Ga0207653_10000375 Ga0207653_1000037513 405
118 3300025910 Ga0207684_10001811 Ga0207684_100018119 405
119 3300025910 Ga0207684_10039681 Ga0207684_100396813 405
120 3300025922 Ga0207646_10000298 Ga0207646_1000029832 405
121 3300028381 Ga0268264_10227439 Ga0268264_102274391 405
122 3300028653 Ga0265323_10013936 Ga0265323_100139363 405
123 3300031733 Ga0316577_10033948 Ga0316577_100339482 405
124 3300035692 Ga0373935_0137635 Ga0373935_0137635_101_1333 405
125 3300036401 Ga0373937_0189374 Ga0373937_0189374_634_1866 405
126 3300036712 Ga0316584_0002673 Ga0316584_0002673_8023_9258 405
127 3300042461 Ga0439460_0008765 Ga0439460_0008765_1274_2494 405
128 3300044712 Ga0453684_0246793 Ga0453684_0246793_217_1458 405
129 3300046472 Ga0495580_0000462 Ga0495580_0000462_23397_24635 405
130 3300046472 Ga0495580_0108624 Ga0495580_0108624_299_1534 405
131 3300046681 Ga0495647_0005154 Ga0495647_0005154_269_1504 405
132 3300047471 Ga0495684_0012981 Ga0495684_0012981_2729_4171 405
133 3300048928 Ga0496125_0100511 Ga0496125_0100511_282_1535 405
134 3300049576 Ga0501040_0024503 Ga0501040_0024503_2334_3563 405
135 3300049587 Ga0501071_0027981 Ga0501071_0027981_1850_3079 405
136 3300049588 Ga0501072_0019545 Ga0501072_0019545_1422_2651 405
137 3300049591 Ga0501075_0013279 Ga0501075_0013279_1176_2405 405
138 3300049592 Ga0501076_0008041 Ga0501076_0008041_1372_2601 405
139 3300049592 Ga0501076_0031513 Ga0501076_0031513_253_1485 405
140 3300049742 Ga0501080_0161964 Ga0501080_0161964_480_1709 405
141 3300049743 Ga0501081_0024451 Ga0501081_0024451_269_1498 405
142 3300049743 Ga0501081_0066224 Ga0501081_0066224_896_2128 405
143 3300050507 nmdc:mga05p37_3_c1 nmdc:mga05p37_3_c1_157049_158281 405
144 3300050507 nmdc:mga05p37_797_c1 nmdc:mga05p37_797_c1_7529_8749 405
145 3300050510 nmdc:mga06r32_89570_c1 nmdc:mga06r32_89570_c1_259_1479 405
146 3300054114 Ga0501084_0049593 Ga0501084_0049593_108_1340 405
147 3300054114 Ga0501084_0195951 Ga0501084_0195951_412_1641 405
148 3300059421 Ga0590071_005368 Ga0590071_005368_1792_3012 405
149 3300059426 Ga0590077_003030 Ga0590077_003030_389_1609 405
150 3300060353 Ga0501082_0094006 Ga0501082_0094006_77_1309 405
151 3300061734 Ga0530510_0002590 Ga0530510_0002590_527_1756 405
152 3300003203 JGI25406J46586_10002279 JGI25406J46586_100022792 406
153 3300005985 Ga0081539_10000036 Ga0081539_1000003661 406

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06245

DUF1015

Protein of unknown function (DUF1015)

73

393

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
5uje-assembly1.cif.gz_A sbni with c-terminal truncation from staphylococcus aureus 0.6773 106 404
3hy2-assembly1.cif.gz_Y crystal structure of sulfiredoxin in complex with peroxiredoxin i and atp:mg2+ 0.6679 96 241
5ujd-assembly1.cif.gz_B sbni from staphylococcus pseudintermedius 0.6506 106 402
6bqw-assembly1.cif.gz_A alfa filament bound to amppnp 0.6364 277 300
6nr6-assembly1.cif.gz_A crystal structure of staphylococcus pseudintermedius sbni in complex with adp 0.6033 106 401
ID Description Score Start End Superfamily
1vk1A01 Alpha Beta;Alpha-Beta Complex;Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain;Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain 0.8269 106 243 3.90.1530.10
af_Q2G1M5_10_76_3.90.1530.10 Alpha Beta;Alpha-Beta Complex;Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain;Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain 0.7597 110 226 3.90.1530.10
af_Q7TP44_37_119_3.90.1530.10 Alpha Beta;Alpha-Beta Complex;Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain;Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain 0.6895 106 241 3.90.1530.10
af_Q2G1M5_10_76_3.90.1530.10 Alpha Beta;Alpha-Beta Complex;Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain;Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain 0.6764 110 226 3.90.1530.10
af_Q7TP44_37_119_3.90.1530.10 Alpha Beta;Alpha-Beta Complex;Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain;Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain 0.6389 106 241 3.90.1530.10
ID Description Score Start End GO Terms
AF-A0A7W0MJZ6-F1-model_v4 DUF1015 domain-containing protein 0.9858 1 225
AF-A0A2H0Z3A1-F1-model_v4 DUF1015 domain-containing protein 0.9799 1 406
AF-A0A350CA29-F1-model_v4 DUF1015 domain-containing protein 0.9794 1 166
AF-A0A3D2AY36-F1-model_v4 DUF1015 domain-containing protein 0.979 1 179
AF-A0A2H0Z3A1-F1-model_v4 DUF1015 domain-containing protein 0.9776 1 406

Feature Viewer

pLDDT pTM Quality
94.18 0.91 High
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Predicted Structure (AlphaFold2)

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