F220327

General Info

Members Datasets Scaffolds Average Seq Length
154 69 153 343

Family's Representative Sequence

Representative Sequence 3300045051|Ga0451576_0032001|Ga0451576_0032001_3010_4167
Length 385
Sequence MILALESSCDETAVAVFDPTRGFVGEWVHSQIALHEAYGGVVPDLASREHLQHFAPLVQRALGVVQPTQVTQIAVTQGPGLAACLAMGLSVAKSLGLAWRVPVVGVNHLRAHAFSPFIALHEQAPAEFDAAFAKLLPHLGLLVSGGNTALFSIDEQRRIKLIASTMDDAAGEALDKGAKLLGLGYPGGPQVEKLARTGDTKAFQFPKAVAQKATLDFSFSGLKTSLRYTLEKMSPEEIERRKADLCASYQHAVMDALVRKARLALDRGDVGRGRLTPPVAGGEVANSRQGQETPPYTDATPFRSVGLSGGVANNKVLQDEIEKLAGQRRVPFFRARPQHTGDNAGMIAFAAWAEREAGGVSRGGPDGLSGTGFDLEIAPSMPLAQ

Samples

Sample ID Description Type Environment
1 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
11 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
12 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
13 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
14 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
15 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
20 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
21 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
22 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
23 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
24 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
25 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
26 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
27 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
28 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
29 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
30 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
31 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
32 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
33 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
34 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
35 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
36 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
37 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
38 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
39 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
40 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
41 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
42 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
43 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
44 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
45 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
46 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
47 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
48 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
49 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
50 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
51 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
52 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
53 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
54 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
55 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
56 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
57 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
58 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
59 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
60 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
61 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
62 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
63 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
64 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
65 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
66 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
67 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
68 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
69 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.35
Metatranscriptomes 0
Isolates 0.65

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 94.81
Stem 0
Stem Tuber 0
Unclassified 5.19

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10002930 3300003320 Bacteria 16514
2 rootH2_10160361 3300003320 Bacteria 1737
3 rootL2_10091518 3300003322 Bacteria 2081
4 rootH1_10021467 3300003323 Bacteria 3337
5 rootH1_10040712 3300003323 Bacteria 2970
6 Ga0070658_10036709 3300005327 Unclassified 3950
7 Ga0068869_100000073 3300005334 Bacteria 46167
8 Ga0068868_100014075 3300005338 Bacteria 5889
9 Ga0068868_100094232 3300005338 Bacteria 2415
10 Ga0068867_100002676 3300005459 Bacteria 12567
11 Ga0070679_100007694 3300005530 Bacteria 10088
12 Ga0068856_100002414 3300005614 Bacteria 19223
13 Ga0068856_100076488 3300005614 Bacteria 3316
14 Ga0070717_10000016 3300006028 Bacteria 205932
15 Ga0097621_100018534 3300006237 Bacteria 5321
16 Ga0068871_100001465 3300006358 Bacteria 15809
17 Ga0068865_100000546 3300006881 Bacteria 20897
18 Ga0207652_10006103 3300025921 Bacteria 9746
19 Ga0207704_10000890 3300025938 Bacteria 13245
20 Ga0207689_10001573 3300025942 Bacteria 21621
21 Ga0207661_10013269 3300025944 Bacteria 6016
22 Ga0207677_10014369 3300026023 Bacteria 4622
23 Ga0207677_10196019 3300026023 Bacteria 1601
24 Ga0207702_10000410 3300026078 Bacteria 48992
25 Ga0207702_10555170 3300026078 Bacteria 1124
26 Ga0207648_10011822 3300026089 Bacteria 8203
27 Ga0265337_1006420 3300028556 Unclassified 4537
28 Ga0265319_1000130 3300028563 Bacteria 55833
29 Ga0265319_1002471 3300028563 Bacteria 10080
30 Ga0265319_1004687 3300028563 Bacteria 6704
31 Ga0265319_1006294 3300028563 Bacteria 5519
32 Ga0265319_1007377 3300028563 Bacteria 4951
33 Ga0265319_1043947 3300028563 Bacteria 1498
34 Ga0265334_10004763 3300028573 Bacteria 5966
35 Ga0265318_10000002 3300028577 Bacteria 428208
36 Ga0265318_10000954 3300028577 Bacteria 18596
37 Ga0265318_10001069 3300028577 Bacteria 17274
38 Ga0265318_10005230 3300028577 Bacteria 6115
39 Ga0265318_10019105 3300028577 Unclassified 2783
40 Ga0265318_10030771 3300028577 Bacteria 2086
41 Ga0265318_10055820 3300028577 Bacteria 1477
42 Ga0265323_10000181 3300028653 Bacteria 37901
43 Ga0265323_10006045 3300028653 Bacteria 5113
44 Ga0265323_10009573 3300028653 Bacteria 3951
45 Ga0265323_10015529 3300028653 Bacteria 2994
46 Ga0265322_10001684 3300028654 Bacteria 7032
47 Ga0265338_10026517 3300028800 Bacteria 5842
48 Ga0265338_10078682 3300028800 Bacteria 2779
49 Ga0265324_10006507 3300029957 Bacteria 4856
50 Ga0265324_10011094 3300029957 Bacteria 3446
51 Ga0265324_10015086 3300029957 Unclassified 2845
52 Ga0265328_10035791 3300031239 Bacteria 1835
53 Ga0265328_10061626 3300031239 Bacteria 1377
54 Ga0265320_10000023 3300031240 Bacteria 171409
55 Ga0265320_10000468 3300031240 Bacteria 31583
56 Ga0265320_10001110 3300031240 Bacteria 19849
57 Ga0265320_10005294 3300031240 Bacteria 8310
58 Ga0265320_10011665 3300031240 Bacteria 5160
59 Ga0265320_10012932 3300031240 Bacteria 4824
60 Ga0265320_10014139 3300031240 Bacteria 4561
61 Ga0265320_10025039 3300031240 Bacteria 3144
62 Ga0265320_10033365 3300031240 Bacteria 2628
63 Ga0265320_10059884 3300031240 Bacteria 1820
64 Ga0265320_10081177 3300031240 Bacteria 1513
65 Ga0265320_10086868 3300031240 Bacteria 1453
66 Ga0265320_10110222 3300031240 Bacteria 1261
67 Ga0265325_10032527 3300031241 Bacteria 2784
68 Ga0265325_10067799 3300031241 Unclassified 1797
69 Ga0265340_10020135 3300031247 Bacteria 3433
70 Ga0265331_10002784 3300031250 Bacteria 11602
71 Ga0265331_10026244 3300031250 Bacteria 2931
72 Ga0265327_10000616 3300031251 Bacteria 58773
73 Ga0265327_10000643 3300031251 Bacteria 56654
74 Ga0265327_10004311 3300031251 Bacteria 12688
75 Ga0265327_10004351 3300031251 Bacteria 12602
76 Ga0265327_10051342 3300031251 Bacteria 2153
77 Ga0265327_10117031 3300031251 Bacteria 1267
78 Ga0265316_10004871 3300031344 Bacteria 13227
79 Ga0265316_10009622 3300031344 Bacteria 8881
80 Ga0265316_10010330 3300031344 Bacteria 8517
81 Ga0265316_10019664 3300031344 Bacteria 5767
82 Ga0265316_10058029 3300031344 Bacteria 3017
83 Ga0265316_10063574 3300031344 Bacteria 2861
84 Ga0307509_10201586 3300031507 Bacteria 1826
85 Ga0307408_100000032 3300031548 Bacteria 213693
86 Ga0265313_10002558 3300031595 Bacteria 15536
87 Ga0265313_10005231 3300031595 Bacteria 9613
88 Ga0265313_10008533 3300031595 Bacteria 6794
89 Ga0265313_10013253 3300031595 Bacteria 4960
90 Ga0265313_10017114 3300031595 Bacteria 4135
91 Ga0307508_10001637 3300031616 Bacteria 24947
92 Ga0265314_10002115 3300031711 Bacteria 20851
93 Ga0265314_10004108 3300031711 Bacteria 13718
94 Ga0265314_10013923 3300031711 Bacteria 6470
95 Ga0265314_10153782 3300031711 Bacteria 1407
96 Ga0265314_10196682 3300031711 Unclassified 1195
97 Ga0265342_10002170 3300031712 Bacteria 17255
98 Ga0265342_10012349 3300031712 Bacteria 5788
99 Ga0265342_10060945 3300031712 Bacteria 2224
100 Ga0265342_10143285 3300031712 Bacteria 1332
101 Ga0307410_10000101 3300031852 Bacteria 30021
102 Ga0307407_10017649 3300031903 Bacteria 3588
103 Ga0307407_10092361 3300031903 Bacteria 1858
104 Ga0307412_10013667 3300031911 Bacteria 4769
105 Ga0307409_100000101 3300031995 Bacteria 31172
106 Ga0307416_100000038 3300032002 Bacteria 136704
107 Ga0395905_0000018 3300037471 Bacteria 369321
108 Ga0439445_0004540 3300042004 Bacteria 3144
109 Ga0451577_0000024 3300042876 Bacteria 411758
110 Ga0451577_0109041 3300042876 Bacteria 2475
111 Ga0451577_0150487 3300042876 Bacteria 2094
112 Ga0451577_0504540 3300042876 Bacteria 1098
113 Ga0453684_0000001 3300044712 Bacteria 2623166
114 Ga0453684_0012266 3300044712 Bacteria 14191
115 Ga0453684_0013233 3300044712 Bacteria 13441
116 Ga0453684_0159607 3300044712 Bacteria 2668
117 Ga0453684_0196881 3300044712 Bacteria 2352
118 Ga0451576_0001322 3300045051 Bacteria 42888
119 Ga0451576_0018768 3300045051 Bacteria 7563
120 Ga0451576_0032001 3300045051 Bacteria 5606
121 Ga0451576_0160633 3300045051 Bacteria 2345
122 Ga0451576_0198165 3300045051 Bacteria 2097
123 Ga0466967_0021439 3300045976 Bacteria 5248
124 Ga0501032_0000426 3300049569 Bacteria 34927
125 Ga0501033_0003229 3300049570 Bacteria 13486
126 Ga0501034_0027345 3300049571 Bacteria 5802
127 Ga0501036_0021871 3300049572 Bacteria 5376
128 Ga0501037_0021402 3300049573 Bacteria 4778
129 Ga0501038_0001592 3300049574 Bacteria 21061
130 Ga0501038_0142963 3300049574 Bacteria 1956
131 Ga0501039_0060178 3300049575 Bacteria 2941
132 Ga0501043_0129134 3300049579 Bacteria 1981
133 Ga0501046_0001002 3300049580 Bacteria 27612
134 Ga0501046_0018721 3300049580 Bacteria 5756
135 Ga0501046_0041533 3300049580 Bacteria 3670
136 Ga0501047_0006936 3300049581 Bacteria 10641
137 Ga0501047_0020050 3300049581 Bacteria 6420
138 Ga0501047_0089660 3300049581 Bacteria 2952
139 Ga0501047_0117764 3300049581 Bacteria 2538
140 Ga0501068_0135287 3300049584 Bacteria 1543
141 Ga0501070_0240974 3300049586 Bacteria 1480
142 Ga0501080_0271602 3300049742 Bacteria 1543
143 Ga0501083_0000501 3300049744 Bacteria 25060
144 Ga0501083_0030141 3300049744 Bacteria 3728
145 Ga0501083_0032256 3300049744 Bacteria 3594
146 Ga0501035_0000537 3300049822 Bacteria 42223
147 Ga0501035_0004534 3300049822 Bacteria 13182
148 Ga0501035_0045627 3300049822 Bacteria 3943
149 Ga0501035_0068678 3300049822 Bacteria 3142
150 Ga0501035_0266803 3300049822 Bacteria 1450
151 Ga0501044_0004265 3300049823 Bacteria 16045
152 Ga0501044_0004363 3300049823 Bacteria 15839
153 Ga0501044_0044580 3300049823 Bacteria 4601

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300006028 Ga0070717_10000016 Ga0070717_1000001614 304
2 3300028653 Ga0265323_10015529 Ga0265323_100155293 324
3 3300031240 Ga0265320_10005294 Ga0265320_100052949 324
4 3300031251 Ga0265327_10004311 Ga0265327_1000431113 325
5 3300031250 Ga0265331_10002784 Ga0265331_100027842 326
6 3300031251 Ga0265327_10051342 Ga0265327_100513422 327
7 3300005334 Ga0068869_100000073 Ga0068869_10000007334 328
8 3300005338 Ga0068868_100014075 Ga0068868_1000140756 328
9 3300005459 Ga0068867_100002676 Ga0068867_1000026764 328
10 3300006237 Ga0097621_100018534 Ga0097621_1000185343 328
11 3300006358 Ga0068871_100001465 Ga0068871_10000146513 328
12 3300006881 Ga0068865_100000546 Ga0068865_1000005462 328
13 3300025938 Ga0207704_10000890 Ga0207704_1000089013 328
14 3300025942 Ga0207689_10001573 Ga0207689_1000157311 328
15 3300026023 Ga0207677_10014369 Ga0207677_100143692 328
16 3300026089 Ga0207648_10011822 Ga0207648_100118225 328
17 3300028563 Ga0265319_1006294 Ga0265319_10062942 328
18 3300031240 Ga0265320_10014139 Ga0265320_100141393 328
19 3300031595 Ga0265313_10017114 Ga0265313_100171143 328
20 3300028563 Ga0265319_1000130 Ga0265319_100013028 329
21 3300028577 Ga0265318_10001069 Ga0265318_1000106915 329
22 3300031240 Ga0265320_10081177 Ga0265320_100811772 329
23 3300031711 Ga0265314_10004108 Ga0265314_100041088 329
24 iso_pu_bacteria 2786546940 2788435077 330
25 3300005338 Ga0068868_100094232 Ga0068868_1000942322 331
26 3300026023 Ga0207677_10196019 Ga0207677_101960192 331
27 3300031240 Ga0265320_10086868 Ga0265320_100868681 331
28 3300031251 Ga0265327_10000616 Ga0265327_1000061658 331
29 3300031507 Ga0307509_10201586 Ga0307509_102015862 331
30 3300031595 Ga0265313_10005231 Ga0265313_100052316 331
31 3300031712 Ga0265342_10012349 Ga0265342_100123492 331
32 3300037471 Ga0395905_0000018 Ga0395905_0000018_167897_168922 331
33 3300028556 Ga0265337_1006420 Ga0265337_10064202 332
34 3300028563 Ga0265319_1004687 Ga0265319_10046872 332
35 3300028577 Ga0265318_10000954 Ga0265318_100009549 332
36 3300028577 Ga0265318_10005230 Ga0265318_100052305 332
37 3300028577 Ga0265318_10019105 Ga0265318_100191052 332
38 3300028800 Ga0265338_10078682 Ga0265338_100786822 332
39 3300029957 Ga0265324_10006507 Ga0265324_100065073 332
40 3300029957 Ga0265324_10015086 Ga0265324_100150863 332
41 3300031239 Ga0265328_10035791 Ga0265328_100357912 332
42 3300031240 Ga0265320_10001110 Ga0265320_1000111013 332
43 3300031240 Ga0265320_10012932 Ga0265320_100129322 332
44 3300031241 Ga0265325_10032527 Ga0265325_100325272 332
45 3300031241 Ga0265325_10067799 Ga0265325_100677992 332
46 3300031247 Ga0265340_10020135 Ga0265340_100201353 332
47 3300031251 Ga0265327_10004351 Ga0265327_100043518 332
48 3300031251 Ga0265327_10117031 Ga0265327_101170311 332
49 3300031344 Ga0265316_10009622 Ga0265316_100096222 332
50 3300031344 Ga0265316_10019664 Ga0265316_100196643 332
51 3300031595 Ga0265313_10002558 Ga0265313_1000255820 332
52 3300031595 Ga0265313_10013253 Ga0265313_100132532 332
53 3300031711 Ga0265314_10013923 Ga0265314_100139233 332
54 3300044712 Ga0453684_0012266 Ga0453684_0012266_3507_4544 332
55 3300045051 Ga0451576_0198165 Ga0451576_0198165_263_1300 332
56 3300003320 rootH2_10160361 rootH2_101603612 333
57 3300003323 rootH1_10021467 rootH1_100214673 333
58 3300028653 Ga0265323_10000181 Ga0265323_1000018115 333
59 3300028653 Ga0265323_10009573 Ga0265323_100095732 333
60 3300028654 Ga0265322_10001684 Ga0265322_100016842 333
61 3300031344 Ga0265316_10004871 Ga0265316_100048715 333
62 3300031344 Ga0265316_10010330 Ga0265316_100103302 333
63 3300031344 Ga0265316_10063574 Ga0265316_100635742 333
64 3300031712 Ga0265342_10002170 Ga0265342_1000217011 333
65 3300031712 Ga0265342_10143285 Ga0265342_101432851 333
66 3300044712 Ga0453684_0196881 Ga0453684_0196881_760_1794 333
67 3300049580 Ga0501046_0041533 Ga0501046_0041533_940_1971 333
68 3300049581 Ga0501047_0006936 Ga0501047_0006936_3173_4204 333
69 3300049822 Ga0501035_0045627 Ga0501035_0045627_2092_3123 333
70 3300003323 rootH1_10040712 rootH1_100407122 334
71 3300031240 Ga0265320_10025039 Ga0265320_100250392 334
72 3300031548 Ga0307408_100000032 Ga0307408_100000032119 334
73 3300031852 Ga0307410_10000101 Ga0307410_100001015 334
74 3300031903 Ga0307407_10017649 Ga0307407_100176493 334
75 3300031903 Ga0307407_10092361 Ga0307407_100923612 334
76 3300031911 Ga0307412_10013667 Ga0307412_100136672 334
77 3300031995 Ga0307409_100000101 Ga0307409_10000010129 334
78 3300032002 Ga0307416_100000038 Ga0307416_10000003874 334
79 3300042876 Ga0451577_0000024 Ga0451577_0000024_118723_119757 334
80 3300042876 Ga0451577_0109041 Ga0451577_0109041_619_1659 334
81 3300044712 Ga0453684_0159607 Ga0453684_0159607_1587_2627 334
82 3300005327 Ga0070658_10036709 Ga0070658_100367093 335
83 3300005530 Ga0070679_100007694 Ga0070679_1000076946 335
84 3300005614 Ga0068856_100002414 Ga0068856_1000024143 335
85 3300005614 Ga0068856_100076488 Ga0068856_1000764883 335
86 3300025921 Ga0207652_10006103 Ga0207652_100061035 335
87 3300025944 Ga0207661_10013269 Ga0207661_100132696 335
88 3300026078 Ga0207702_10000410 Ga0207702_1000041038 335
89 3300026078 Ga0207702_10555170 Ga0207702_105551701 335
90 3300028563 Ga0265319_1002471 Ga0265319_10024719 335
91 3300028577 Ga0265318_10030771 Ga0265318_100307712 335
92 3300031240 Ga0265320_10011665 Ga0265320_100116652 335
93 3300031240 Ga0265320_10110222 Ga0265320_101102222 335
94 3300031595 Ga0265313_10008533 Ga0265313_100085337 335
95 3300031711 Ga0265314_10153782 Ga0265314_101537822 335
96 3300042876 Ga0451577_0504540 Ga0451577_0504540_46_1083 335
97 3300044712 Ga0453684_0000001 Ga0453684_0000001_1960970_1962010 335
98 3300045051 Ga0451576_0001322 Ga0451576_0001322_3992_5029 335
99 3300045051 Ga0451576_0018768 Ga0451576_0018768_2553_3590 335
100 3300045051 Ga0451576_0160633 Ga0451576_0160633_627_1664 335
101 3300045976 Ga0466967_0021439 Ga0466967_0021439_1183_2229 335
102 3300049570 Ga0501033_0003229 Ga0501033_0003229_10526_11590 335
103 3300049573 Ga0501037_0021402 Ga0501037_0021402_1935_2999 335
104 3300049574 Ga0501038_0142963 Ga0501038_0142963_715_1779 335
105 3300049579 Ga0501043_0129134 Ga0501043_0129134_397_1443 335
106 3300049580 Ga0501046_0001002 Ga0501046_0001002_11660_12724 335
107 3300049744 Ga0501083_0000501 Ga0501083_0000501_12865_13911 335
108 3300049744 Ga0501083_0030141 Ga0501083_0030141_2297_3334 335
109 3300049822 Ga0501035_0068678 Ga0501035_0068678_1049_2095 335
110 3300049823 Ga0501044_0044580 Ga0501044_0044580_3312_4358 335
111 3300003322 rootL2_10091518 rootL2_100915182 336
112 3300028573 Ga0265334_10004763 Ga0265334_100047632 336
113 3300028577 Ga0265318_10000002 Ga0265318_10000002372 336
114 3300029957 Ga0265324_10011094 Ga0265324_100110942 336
115 3300031239 Ga0265328_10061626 Ga0265328_100616262 336
116 3300031240 Ga0265320_10033365 Ga0265320_100333651 336
117 3300031250 Ga0265331_10026244 Ga0265331_100262442 336
118 3300031616 Ga0307508_10001637 Ga0307508_100016375 336
119 3300031711 Ga0265314_10002115 Ga0265314_100021157 336
120 3300042876 Ga0451577_0150487 Ga0451577_0150487_1031_2071 336
121 3300044712 Ga0453684_0013233 Ga0453684_0013233_1910_2950 336
122 3300049571 Ga0501034_0027345 Ga0501034_0027345_4682_5722 336
123 3300049581 Ga0501047_0117764 Ga0501047_0117764_961_2007 337
124 3300049822 Ga0501035_0266803 Ga0501035_0266803_360_1406 337
125 3300028563 Ga0265319_1043947 Ga0265319_10439472 338
126 3300031240 Ga0265320_10000023 Ga0265320_1000002341 338
127 3300031240 Ga0265320_10000468 Ga0265320_1000046824 338
128 3300028563 Ga0265319_1007377 Ga0265319_10073772 339
129 3300028577 Ga0265318_10055820 Ga0265318_100558202 339
130 3300031240 Ga0265320_10059884 Ga0265320_100598841 339
131 3300049572 Ga0501036_0021871 Ga0501036_0021871_1425_2480 339
132 3300049574 Ga0501038_0001592 Ga0501038_0001592_12111_13166 339
133 3300049575 Ga0501039_0060178 Ga0501039_0060178_1414_2469 339
134 3300049580 Ga0501046_0018721 Ga0501046_0018721_1211_2263 339
135 3300049581 Ga0501047_0089660 Ga0501047_0089660_236_1288 339
136 3300049584 Ga0501068_0135287 Ga0501068_0135287_355_1410 339
137 3300049742 Ga0501080_0271602 Ga0501080_0271602_55_1110 339
138 3300049744 Ga0501083_0032256 Ga0501083_0032256_1363_2418 339
139 3300049822 Ga0501035_0004534 Ga0501035_0004534_7789_8844 339
140 3300049569 Ga0501032_0000426 Ga0501032_0000426_7580_8632 340
141 3300049581 Ga0501047_0020050 Ga0501047_0020050_380_1432 340
142 3300049586 Ga0501070_0240974 Ga0501070_0240974_301_1353 340
143 3300049822 Ga0501035_0000537 Ga0501035_0000537_7209_8261 340
144 3300049823 Ga0501044_0004265 Ga0501044_0004265_5489_6541 340
145 3300049823 Ga0501044_0004363 Ga0501044_0004363_6411_7463 340
146 3300028800 Ga0265338_10026517 Ga0265338_100265173 341
147 3300028653 Ga0265323_10006045 Ga0265323_100060451 347
148 3300031344 Ga0265316_10058029 Ga0265316_100580292 357
149 3300031711 Ga0265314_10196682 Ga0265314_101966821 357
150 3300031712 Ga0265342_10060945 Ga0265342_100609452 357
151 3300031251 Ga0265327_10000643 Ga0265327_1000064343 361
152 3300045051 Ga0451576_0032001 Ga0451576_0032001_3010_4167 365
153 3300003320 rootH2_10002930 rootH2_100029303 370
154 3300042004 Ga0439445_0004540 Ga0439445_0004540_1654_2811 370

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00814

TsaD

tRNA N6-adenosine threonylcarbamoyltransferase

22

349

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
4wq5-assembly1.cif.gz_A ygjd(v85e)-yeaz heterodimer in complex with atp 0.8936 2 350
4wq4-assembly2.cif.gz_B e. coli ygjd(e12a)-yeaz heterodimer in complex with atp 0.8891 2 350
4ydu-assembly1.cif.gz_A crystal structure of e. coli ygjd-yeaz heterodimer in complex with adp 0.8877 2 350
3zeu-assembly2.cif.gz_B structure of a salmonella typhimurium ygjd-yeaz heterodimer bound to atpgammas 0.8791 2 350
5jmv-assembly1.cif.gz_B crystal structure of mjkae1-pfupcc1 complex 0.8655 2 337
ID Description Score Start End Superfamily
3zeuB02 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9299 127 323 3.30.420.40
3zeuB02 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9245 127 323 3.30.420.40
3zeuB01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9231 2 108 3.30.420.40
af_P05852_1_106_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9229 2 92 3.30.420.40
af_Q32LQ3_26_143_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9214 1 103 3.30.420.40
ID Description Score Start End GO Terms
AF-B6E1V1-F1-model_v4 N(6)-L-threonylcarbamoyladenine synthase (EC 2.3.1.234) 0.9455 129 340 GO:0008033
GO:0046872
GO:0061711
AF-A0A1F4VND6-F1-model_v4 N(6)-L-threonylcarbamoyladenine synthase (EC 2.3.1.234) 0.9398 78 338 GO:0002949
GO:0046872
GO:0061711
AF-A0A176RXI7-F1-model_v4 N(6)-L-threonylcarbamoyladenine synthase (EC 2.3.1.234) 0.9305 136 339 GO:0006508
GO:0008033
GO:0008233
GO:0046872
GO:0061711
AF-A0A2M7X162-F1-model_v4 N(6)-L-threonylcarbamoyladenine synthase (EC 2.3.1.234) 0.9298 126 340 GO:0008033
GO:0046872
GO:0061711
AF-A0A2A2RQN2-F1-model_v4 N(6)-L-threonylcarbamoyladenine synthase (EC 2.3.1.234) 0.9277 1 344 GO:0002949
GO:0046872
GO:0061711

Feature Viewer

pLDDT pTM Quality
81.73 0.83 High
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Predicted Structure (AlphaFold2)

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