F221685
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 155 | 129 | 154 | 685 |
Family's Representative Sequence
| Representative Sequence | 3300005468|Ga0070707_100001051|Ga0070707_10000105112 |
| Length | 736 |
| Sequence | MSDSRTRRRAKAPRGGSAVGASTPFQPQTPKTDGGDRRLFGSLYTHGFARVMAAVPRVSLTDPFVNAERILDLSRRAADQHASLIVFPELGLSGYSNEDLFHQDTLTRAVIKALERVVTGSLELMPVIVVGAPLRAETRLFNTAVVIHRGRVLGIVPKSYLPNYREFYEKRQFSAARDAIGGTIRLLDEAVPFGPDLLFESRDLDGFVLHIEICEDLWVPIPPSTYAALAGASVLANLSASNITIGKADYRRLLCASQSARAIAVYLYTAADSGESTTDLAWDGHALIYENGERLAESQRFADQEQLIRADVDLERLAADRVRTTSFSDSVHDHRQRLQDIRRVEFELGIPRTEVPLVRNVERFPYVPADPASRSERCNEVYRIQVQGLTTRLRATGIKKAVIGVSGGLDSAQALIVAARSMDQLGLPRTNVLAYTMPGFATSESTLRNARRLMDALGVTAREIDIRPSATQMLRDIEHPAVDEPVYDRTYENVQAGDRTSHLFRLANRHDGLVVGTSDLSELALGWATYGVGDQMAHYSVNASVPKTLVQFLIRWIVDTKELGPKAGGVLQSVLETVISPELVPSDDAHSKTPQESESAIGPFDLQDFFLYYVLRYGFRPSRVAFLARHAWRDREQGGWPDLIPVERRYEYSLAEIKHWLGVFLFRFFQISQFKRSAIPNSPKVGSGGSLSPRGDWRAPSDSTAAVWLDELERNVPGRATSTALRPKTRVAKHSR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2523231044 | Gordonia rhizosphera NBRC 16068 | Isolate | Rhizosphere |
| 2 | 3300002704 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB | Metagenome | Unclassified |
| 3 | 3300002705 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS | Metagenome | Unclassified |
| 4 | 3300002738 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA | Metagenome | Unclassified |
| 5 | 3300002741 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL | Metagenome | Unclassified |
| 6 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 7 | 3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) | Metagenome | Rhizosphere |
| 8 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 9 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 16 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 17 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 18 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 19 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 20 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 22 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 23 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 24 | 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Metagenome | Rhizosphere |
| 25 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 26 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 27 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 28 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 29 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 30 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 31 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 32 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 33 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300025206 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) | Metagenome | Unclassified |
| 39 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 40 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 41 | 3300025256 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) | Metagenome | Unclassified |
| 42 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300027682 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300027717 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300027876 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300031090 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 62 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 63 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 64 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 65 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 66 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 67 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 68 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 69 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 70 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 71 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 72 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 73 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 74 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 75 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 76 | 3300039093 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 | Metagenome | Unclassified |
| 77 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 78 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 79 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 80 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 81 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 82 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 83 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 84 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046557 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300047469 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 91 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 92 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 93 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 94 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 95 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 96 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 97 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 98 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 99 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 100 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 101 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 102 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 103 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 104 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 105 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 106 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 107 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 108 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 109 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 110 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 111 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 112 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 113 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 114 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 115 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 116 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 117 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 118 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 119 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 120 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 121 | 3300053091 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere | Metagenome | Endosphere |
| 122 | 3300053111 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere | Metagenome | Endosphere |
| 123 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 124 | 3300053178 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere | Metagenome | Endosphere |
| 125 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 126 | 3300059421 | Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 | Metagenome | Rhizosphere |
| 127 | 3300059424 | Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 | Metagenome | Rhizosphere |
| 128 | 3300059426 | Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 | Metagenome | Rhizosphere |
| 129 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 98.71 |
| Metatranscriptomes | 0.65 |
| Isolates | 0.65 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 3.87 |
| Nodule | 0 |
| Rhizoplane | 0.65 |
| Rhizosphere | 83.23 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 12.26 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25155J39150_1000046 | 3300002704 | Bacteria | 80685 |
| 2 | JGI25156J39149_1000070 | 3300002705 | Bacteria | 80840 |
| 3 | JGI25154J39366_1000092 | 3300002738 | Bacteria | 80685 |
| 4 | JGI25157J39369_1000087 | 3300002741 | Bacteria | 80840 |
| 5 | JGI25406J46586_10003906 | 3300003203 | Bacteria | 6966 |
| 6 | Ga0065712_10077874 | 3300005290 | Bacteria | 3430 |
| 7 | Ga0070680_100059540 | 3300005336 | Bacteria | 3125 |
| 8 | Ga0070668_100017677 | 3300005347 | Bacteria | 5347 |
| 9 | Ga0070669_100028876 | 3300005353 | Bacteria | 3995 |
| 10 | Ga0070675_100017271 | 3300005354 | Bacteria | 5732 |
| 11 | Ga0070671_100054449 | 3300005355 | Bacteria | 3327 |
| 12 | Ga0070674_100013265 | 3300005356 | Bacteria | 5089 |
| 13 | Ga0070713_100020102 | 3300005436 | Bacteria | 5112 |
| 14 | Ga0070700_100023646 | 3300005441 | Bacteria | 3596 |
| 15 | Ga0068867_100006659 | 3300005459 | Bacteria | 8168 |
| 16 | Ga0070707_100001051 | 3300005468 | Bacteria | 27311 |
| 17 | Ga0070698_100020527 | 3300005471 | Bacteria | 6926 |
| 18 | Ga0070697_100002738 | 3300005536 | Bacteria | 13567 |
| 19 | Ga0070672_100036498 | 3300005543 | Bacteria | 3745 |
| 20 | Ga0070695_100046736 | 3300005545 | Bacteria | 2762 |
| 21 | Ga0068856_100006346 | 3300005614 | Bacteria | 11597 |
| 22 | Ga0068859_100013995 | 3300005617 | Bacteria | 8045 |
| 23 | Ga0068870_10020656 | 3300005840 | Bacteria | 3211 |
| 24 | Ga0068862_100002993 | 3300005844 | Bacteria | 14736 |
| 25 | Ga0081539_10005384 | 3300005985 | Bacteria | 13098 |
| 26 | Ga0075364_10004844 | 3300006051 | Bacteria | 7796 |
| 27 | Ga0070712_100003198 | 3300006175 | Bacteria | 10089 |
| 28 | Ga0075428_100048837 | 3300006844 | Bacteria | 4643 |
| 29 | Ga0075431_100010431 | 3300006847 | Bacteria | 9339 |
| 30 | Ga0075431_100032471 | 3300006847 | Bacteria | 5379 |
| 31 | Ga0068865_100004927 | 3300006881 | Bacteria | 8070 |
| 32 | Ga0075436_100004877 | 3300006914 | Bacteria | 9222 |
| 33 | Ga0097620_100013996 | 3300006931 | Bacteria | 8045 |
| 34 | Ga0111539_10014168 | 3300009094 | Bacteria | 9955 |
| 35 | Ga0111539_10212918 | 3300009094 | Bacteria | 2251 |
| 36 | Ga0114129_10009376 | 3300009147 | Bacteria | 13951 |
| 37 | Ga0114129_10057486 | 3300009147 | Bacteria | 5443 |
| 38 | Ga0105242_10017859 | 3300009176 | Bacteria | 5537 |
| 39 | Ga0157372_10182920 | 3300013307 | Bacteria | 2426 |
| 40 | Ga0209435_100059 | 3300025206 | Bacteria | 80744 |
| 41 | Ga0209646_1000179 | 3300025246 | Bacteria | 80892 |
| 42 | Ga0209026_1000212 | 3300025250 | Bacteria | 80892 |
| 43 | Ga0209759_1000246 | 3300025256 | Bacteria | 80892 |
| 44 | Ga0207645_10016746 | 3300025907 | Bacteria | 4846 |
| 45 | Ga0207643_10002118 | 3300025908 | Bacteria | 10928 |
| 46 | Ga0207684_10061783 | 3300025910 | Bacteria | 3181 |
| 47 | Ga0207695_10000367 | 3300025913 | Bacteria | 103313 |
| 48 | Ga0207693_10008517 | 3300025915 | Bacteria | 8396 |
| 49 | Ga0207646_10000135 | 3300025922 | Bacteria | 100459 |
| 50 | Ga0207646_10069362 | 3300025922 | Bacteria | 3148 |
| 51 | Ga0207659_10054778 | 3300025926 | Bacteria | 2849 |
| 52 | Ga0207644_10061662 | 3300025931 | Bacteria | 2717 |
| 53 | Ga0207706_10004881 | 3300025933 | Bacteria | 12543 |
| 54 | Ga0207704_10008790 | 3300025938 | Bacteria | 4849 |
| 55 | Ga0207691_10000307 | 3300025940 | Bacteria | 48698 |
| 56 | Ga0207668_10010757 | 3300025972 | Bacteria | 5540 |
| 57 | Ga0207708_10015140 | 3300026075 | Bacteria | 5778 |
| 58 | Ga0207648_10002642 | 3300026089 | Bacteria | 19142 |
| 59 | Ga0207675_100001848 | 3300026118 | Bacteria | 21253 |
| 60 | Ga0209971_1000848 | 3300027682 | Bacteria | 7882 |
| 61 | Ga0209971_1006038 | 3300027682 | Bacteria | 2871 |
| 62 | Ga0209998_10000548 | 3300027717 | Bacteria | 10147 |
| 63 | Ga0209974_10001992 | 3300027876 | Bacteria | 7445 |
| 64 | Ga0268265_10016286 | 3300028380 | Bacteria | 5103 |
| 65 | Ga0265760_10007716 | 3300031090 | Bacteria | 3075 |
| 66 | Ga0265327_10001344 | 3300031251 | Bacteria | 31888 |
| 67 | Ga0265327_10008764 | 3300031251 | Bacteria | 7466 |
| 68 | Ga0265316_10035597 | 3300031344 | Bacteria | 4033 |
| 69 | Ga0307410_10013459 | 3300031852 | Bacteria | 4774 |
| 70 | Ga0307409_100011561 | 3300031995 | Bacteria | 5575 |
| 71 | Ga0316574_0020332 | 3300035398 | Bacteria | 3929 |
| 72 | Ga0373927_0000177 | 3300035695 | Bacteria | 50406 |
| 73 | Ga0373927_0031304 | 3300035695 | Bacteria | 3468 |
| 74 | Ga0373933_0002321 | 3300035724 | Bacteria | 10800 |
| 75 | Ga0373925_0005084 | 3300037068 | Bacteria | 9845 |
| 76 | Ga0395899_0046927 | 3300037312 | Bacteria | 3216 |
| 77 | Ga0395900_0002227 | 3300037418 | Bacteria | 21635 |
| 78 | Ga0395900_0037619 | 3300037418 | Bacteria | 4988 |
| 79 | Ga0395898_0001392 | 3300037466 | Bacteria | 34567 |
| 80 | Ga0395898_0082999 | 3300037466 | Bacteria | 3088 |
| 81 | Ga0395905_0111428 | 3300037471 | Bacteria | 2570 |
| 82 | Ga0436364_0826827 | 3300037853 | Bacteria | 12894 |
| 83 | Ga0436364_1117672 | 3300037853 | Bacteria | 11176 |
| 84 | Ga0395901_0051910 | 3300038443 | Bacteria | 4262 |
| 85 | Ga0400489_40873 | 3300039093 | Bacteria | 16157 |
| 86 | Ga0436365_0374713 | 3300039437 | Bacteria | 11204 |
| 87 | Ga0436365_0931262 | 3300039437 | Bacteria | 10519 |
| 88 | Ga0436365_1429498 | 3300039437 | Bacteria | 11037 |
| 89 | Ga0466966_0028412 | 3300044684 | Bacteria | 3644 |
| 90 | Ga0466966_0041460 | 3300044684 | Bacteria | 2958 |
| 91 | Ga0466961_0028481 | 3300044693 | Bacteria | 3591 |
| 92 | Ga0466961_0044014 | 3300044693 | Bacteria | 2857 |
| 93 | Ga0453684_0001984 | 3300044712 | Bacteria | 52481 |
| 94 | Ga0453684_0148787 | 3300044712 | Bacteria | 2785 |
| 95 | Ga0466959_0002192 | 3300045049 | Bacteria | 12419 |
| 96 | Ga0466959_0013513 | 3300045049 | Bacteria | 5916 |
| 97 | Ga0466959_0055477 | 3300045049 | Bacteria | 2893 |
| 98 | Ga0451576_0006005 | 3300045051 | Bacteria | 15016 |
| 99 | Ga0451576_0014456 | 3300045051 | Bacteria | 8780 |
| 100 | Ga0466958_0004591 | 3300045836 | Bacteria | 7316 |
| 101 | Ga0466958_0005350 | 3300045836 | Bacteria | 6897 |
| 102 | Ga0495607_0060232 | 3300046501 | Bacteria | 2162 |
| 103 | Ga0495622_0004279 | 3300046557 | Bacteria | 6643 |
| 104 | Ga0495613_0003468 | 3300046689 | Bacteria | 11796 |
| 105 | Ga0495649_0005053 | 3300046694 | Bacteria | 8476 |
| 106 | Ga0495604_0032468 | 3300047317 | Bacteria | 4137 |
| 107 | Ga0495673_0037771 | 3300047469 | Bacteria | 2203 |
| 108 | Ga0496102_0050141 | 3300048905 | Bacteria | 3800 |
| 109 | Ga0496119_0001770 | 3300048922 | Bacteria | 25133 |
| 110 | Ga0496122_0000106 | 3300048925 | Bacteria | 193672 |
| 111 | Ga0496123_0000022 | 3300048926 | Bacteria | 361832 |
| 112 | Ga0496125_0002299 | 3300048928 | Bacteria | 25227 |
| 113 | Ga0496126_0015988 | 3300048929 | Bacteria | 7525 |
| 114 | Ga0501034_0013275 | 3300049571 | Bacteria | 8488 |
| 115 | Ga0501037_0066077 | 3300049573 | Bacteria | 2635 |
| 116 | Ga0501038_0032767 | 3300049574 | Bacteria | 4581 |
| 117 | Ga0501038_0068925 | 3300049574 | Bacteria | 3006 |
| 118 | Ga0501039_0047620 | 3300049575 | Bacteria | 3314 |
| 119 | Ga0501040_0009674 | 3300049576 | Bacteria | 6294 |
| 120 | Ga0501040_0031718 | 3300049576 | Bacteria | 3573 |
| 121 | Ga0501046_0023632 | 3300049580 | Bacteria | 5052 |
| 122 | Ga0501047_0031151 | 3300049581 | Bacteria | 5144 |
| 123 | Ga0501071_0015995 | 3300049587 | Bacteria | 5155 |
| 124 | Ga0501072_0020854 | 3300049588 | Bacteria | 5080 |
| 125 | Ga0501074_0022787 | 3300049590 | Bacteria | 4553 |
| 126 | Ga0501075_0036672 | 3300049591 | Bacteria | 3660 |
| 127 | Ga0501076_0020290 | 3300049592 | Bacteria | 5086 |
| 128 | Ga0501077_0007599 | 3300049593 | Bacteria | 6689 |
| 129 | Ga0501079_0011711 | 3300049741 | Bacteria | 6698 |
| 130 | Ga0501080_0039254 | 3300049742 | Bacteria | 4419 |
| 131 | Ga0501081_0000834 | 3300049743 | Bacteria | 18225 |
| 132 | Ga0501083_0056308 | 3300049744 | Bacteria | 2635 |
| 133 | Ga0501045_0041550 | 3300049824 | Bacteria | 3346 |
| 134 | Ga0501045_0061616 | 3300049824 | Bacteria | 2752 |
| 135 | nmdc:mga00v17_3610_c1 | 3300050491 | Bacteria | 7993 |
| 136 | nmdc:mga05p37_20305_c1 | 3300050507 | Bacteria | 8038 |
| 137 | nmdc:mga05p37_38875_c1 | 3300050507 | Bacteria | 5837 |
| 138 | nmdc:mga05p37_51768_c1 | 3300050507 | Bacteria | 5049 |
| 139 | nmdc:mga05p37_64958_c1 | 3300050507 | Bacteria | 4491 |
| 140 | nmdc:mga0qj67_12103_c1 | 3300050509 | Bacteria | 6489 |
| 141 | nmdc:mga06r32_66033_c1 | 3300050510 | Bacteria | 3491 |
| 142 | nmdc:mga08y16_123016_c1 | 3300050511 | Bacteria | 2700 |
| 143 | nmdc:mga08x19_3053_c1 | 3300050514 | Bacteria | 10064 |
| 144 | nmdc:mga0a205_44414_c1 | 3300050515 | Bacteria | 4283 |
| 145 | Ga0500647_0018449 | 3300053091 | Bacteria | 3231 |
| 146 | Ga0500572_001248 | 3300053111 | Bacteria | 7165 |
| 147 | Ga0500559_0000016 | 3300053136 | Bacteria | 151244 |
| 148 | Ga0500637_0000389 | 3300053178 | Bacteria | 16734 |
| 149 | Ga0501084_0014936 | 3300054114 | Bacteria | 6438 |
| 150 | Ga0590071_000964 | 3300059421 | Bacteria | 7936 |
| 151 | Ga0590075_000656 | 3300059424 | Bacteria | 9186 |
| 152 | Ga0590077_000219 | 3300059426 | Bacteria | 16439 |
| 153 | Ga0590077_007458 | 3300059426 | Bacteria | 2237 |
| 154 | Ga0530510_0038795 | 3300061734 | Bacteria | 3440 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300013307 | Ga0157372_10182920 | Ga0157372_101829201 | 621 |
| 2 | 3300039093 | Ga0400489_40873 | Ga0400489_40873_9659_11584 | 637 |
| 3 | 3300044712 | Ga0453684_0001984 | Ga0453684_0001984_40038_42026 | 639 |
| 4 | 3300006847 | Ga0075431_100032471 | Ga0075431_1000324712 | 641 |
| 5 | 3300050509 | nmdc:mga0qj67_12103_c1 | nmdc:mga0qj67_12103_c1_4283_6361 | 641 |
| 6 | 3300050510 | nmdc:mga06r32_66033_c1 | nmdc:mga06r32_66033_c1_909_2987 | 641 |
| 7 | 3300009147 | Ga0114129_10009376 | Ga0114129_100093769 | 647 |
| 8 | 3300050507 | nmdc:mga05p37_20305_c1 | nmdc:mga05p37_20305_c1_4370_6394 | 647 |
| 9 | 3300050507 | nmdc:mga05p37_38875_c1 | nmdc:mga05p37_38875_c1_2135_4087 | 647 |
| 10 | 3300050515 | nmdc:mga0a205_44414_c1 | nmdc:mga0a205_44414_c1_2243_4195 | 647 |
| 11 | 3300005290 | Ga0065712_10077874 | Ga0065712_100778742 | 651 |
| 12 | 3300005617 | Ga0068859_100013995 | Ga0068859_1000139956 | 653 |
| 13 | 3300006931 | Ga0097620_100013996 | Ga0097620_1000139966 | 653 |
| 14 | 3300006847 | Ga0075431_100010431 | Ga0075431_1000104314 | 654 |
| 15 | 3300037418 | Ga0395900_0002227 | Ga0395900_0002227_6065_8143 | 657 |
| 16 | 3300037466 | Ga0395898_0001392 | Ga0395898_0001392_3729_5807 | 657 |
| 17 | 3300005545 | Ga0070695_100046736 | Ga0070695_1000467362 | 658 |
| 18 | 3300009176 | Ga0105242_10017859 | Ga0105242_100178592 | 658 |
| 19 | 3300035724 | Ga0373933_0002321 | Ga0373933_0002321_4300_6279 | 658 |
| 20 | 3300049744 | Ga0501083_0056308 | Ga0501083_0056308_17_2011 | 659 |
| 21 | 3300006914 | Ga0075436_100004877 | Ga0075436_1000048777 | 660 |
| 22 | 3300009094 | Ga0111539_10212918 | Ga0111539_102129181 | 660 |
| 23 | 3300031251 | Ga0265327_10001344 | Ga0265327_100013448 | 660 |
| 24 | 3300049576 | Ga0501040_0031718 | Ga0501040_0031718_1118_3106 | 660 |
| 25 | 3300049588 | Ga0501072_0020854 | Ga0501072_0020854_3065_5053 | 660 |
| 26 | 3300049824 | Ga0501045_0041550 | Ga0501045_0041550_638_2626 | 660 |
| 27 | 3300050514 | nmdc:mga08x19_3053_c1 | nmdc:mga08x19_3053_c1_5752_7740 | 660 |
| 28 | 3300031852 | Ga0307410_10013459 | Ga0307410_100134592 | 661 |
| 29 | 3300050507 | nmdc:mga05p37_51768_c1 | nmdc:mga05p37_51768_c1_1112_3112 | 662 |
| 30 | 3300059426 | Ga0590077_007458 | Ga0590077_007458_51_2102 | 663 |
| 31 | 3300005536 | Ga0070697_100002738 | Ga0070697_1000027385 | 664 |
| 32 | 3300045051 | Ga0451576_0014456 | Ga0451576_0014456_2919_4937 | 664 |
| 33 | 3300027682 | Ga0209971_1006038 | Ga0209971_10060382 | 665 |
| 34 | 3300048905 | Ga0496102_0050141 | Ga0496102_0050141_520_2544 | 665 |
| 35 | 3300006844 | Ga0075428_100048837 | Ga0075428_1000488376 | 666 |
| 36 | iso_pu_bacteria | 2523231044 | 2523384645 | 666 |
| 37 | 3300035695 | Ga0373927_0031304 | Ga0373927_0031304_526_2550 | 669 |
| 38 | 3300005614 | Ga0068856_100006346 | Ga0068856_1000063465 | 670 |
| 39 | 3300035695 | Ga0373927_0000177 | Ga0373927_0000177_11745_13784 | 671 |
| 40 | 3300037068 | Ga0373925_0005084 | Ga0373925_0005084_2325_4364 | 671 |
| 41 | 3300044684 | Ga0466966_0028412 | Ga0466966_0028412_1379_3466 | 674 |
| 42 | 3300045049 | Ga0466959_0013513 | Ga0466959_0013513_1039_3126 | 674 |
| 43 | 3300037471 | Ga0395905_0111428 | Ga0395905_0111428_231_2267 | 677 |
| 44 | 3300053111 | Ga0500572_001248 | Ga0500572_001248_677_2746 | 677 |
| 45 | 3300053136 | Ga0500559_0000016 | Ga0500559_0000016_55911_57947 | 677 |
| 46 | 3300005436 | Ga0070713_100020102 | Ga0070713_1000201025 | 678 |
| 47 | 3300006175 | Ga0070712_100003198 | Ga0070712_1000031982 | 678 |
| 48 | 3300025915 | Ga0207693_10008517 | Ga0207693_100085175 | 678 |
| 49 | 3300037312 | Ga0395899_0046927 | Ga0395899_0046927_786_2849 | 678 |
| 50 | 3300037418 | Ga0395900_0037619 | Ga0395900_0037619_559_2622 | 678 |
| 51 | 3300037466 | Ga0395898_0082999 | Ga0395898_0082999_368_2431 | 678 |
| 52 | 3300038443 | Ga0395901_0051910 | Ga0395901_0051910_73_2136 | 678 |
| 53 | 3300046501 | Ga0495607_0060232 | Ga0495607_0060232_13_2067 | 678 |
| 54 | 3300047469 | Ga0495673_0037771 | Ga0495673_0037771_71_2125 | 678 |
| 55 | 3300031995 | Ga0307409_100011561 | Ga0307409_1000115612 | 679 |
| 56 | 3300046557 | Ga0495622_0004279 | Ga0495622_0004279_916_2973 | 679 |
| 57 | 3300046689 | Ga0495613_0003468 | Ga0495613_0003468_8441_10501 | 679 |
| 58 | 3300046694 | Ga0495649_0005053 | Ga0495649_0005053_3178_5235 | 679 |
| 59 | 3300048922 | Ga0496119_0001770 | Ga0496119_0001770_20377_22524 | 679 |
| 60 | 3300048928 | Ga0496125_0002299 | Ga0496125_0002299_22372_24519 | 679 |
| 61 | 3300048929 | Ga0496126_0015988 | Ga0496126_0015988_2580_4727 | 679 |
| 62 | 3300049571 | Ga0501034_0013275 | Ga0501034_0013275_391_2451 | 679 |
| 63 | 3300053178 | Ga0500637_0000389 | Ga0500637_0000389_10152_12209 | 679 |
| 64 | 3300005355 | Ga0070671_100054449 | Ga0070671_1000544492 | 680 |
| 65 | 3300025913 | Ga0207695_10000367 | Ga0207695_1000036740 | 680 |
| 66 | 3300025931 | Ga0207644_10061662 | Ga0207644_100616621 | 680 |
| 67 | 3300031090 | Ga0265760_10007716 | Ga0265760_100077161 | 680 |
| 68 | 3300031344 | Ga0265316_10035597 | Ga0265316_100355973 | 680 |
| 69 | 3300037853 | Ga0436364_0826827 | Ga0436364_0826827_4744_6807 | 680 |
| 70 | 3300037853 | Ga0436364_1117672 | Ga0436364_1117672_8766_10826 | 680 |
| 71 | 3300039437 | Ga0436365_0374713 | Ga0436365_0374713_4361_6424 | 680 |
| 72 | 3300039437 | Ga0436365_0931262 | Ga0436365_0931262_3641_5701 | 680 |
| 73 | 3300047317 | Ga0495604_0032468 | Ga0495604_0032468_1072_3144 | 680 |
| 74 | 3300049574 | Ga0501038_0068925 | Ga0501038_0068925_26_2068 | 680 |
| 75 | 3300049575 | Ga0501039_0047620 | Ga0501039_0047620_13_2055 | 680 |
| 76 | 3300049576 | Ga0501040_0009674 | Ga0501040_0009674_168_2234 | 680 |
| 77 | 3300049581 | Ga0501047_0031151 | Ga0501047_0031151_2368_4410 | 680 |
| 78 | 3300049590 | Ga0501074_0022787 | Ga0501074_0022787_170_2236 | 680 |
| 79 | 3300049591 | Ga0501075_0036672 | Ga0501075_0036672_127_2193 | 680 |
| 80 | 3300049593 | Ga0501077_0007599 | Ga0501077_0007599_704_2770 | 680 |
| 81 | 3300049741 | Ga0501079_0011711 | Ga0501079_0011711_4485_6551 | 680 |
| 82 | 3300049742 | Ga0501080_0039254 | Ga0501080_0039254_65_2131 | 680 |
| 83 | 3300049743 | Ga0501081_0000834 | Ga0501081_0000834_11907_13973 | 680 |
| 84 | 3300049824 | Ga0501045_0061616 | Ga0501045_0061616_157_2223 | 680 |
| 85 | 3300054114 | Ga0501084_0014936 | Ga0501084_0014936_117_2183 | 680 |
| 86 | 3300059421 | Ga0590071_000964 | Ga0590071_000964_1835_3895 | 680 |
| 87 | 3300059424 | Ga0590075_000656 | Ga0590075_000656_2529_4589 | 680 |
| 88 | 3300059426 | Ga0590077_000219 | Ga0590077_000219_12817_14877 | 680 |
| 89 | 3300003203 | JGI25406J46586_10003906 | JGI25406J46586_100039063 | 681 |
| 90 | 3300005468 | Ga0070707_100001051 | Ga0070707_10000105112 | 681 |
| 91 | 3300005471 | Ga0070698_100020527 | Ga0070698_1000205275 | 681 |
| 92 | 3300005985 | Ga0081539_10005384 | Ga0081539_100053848 | 681 |
| 93 | 3300006051 | Ga0075364_10004844 | Ga0075364_100048446 | 681 |
| 94 | 3300009147 | Ga0114129_10057486 | Ga0114129_100574863 | 681 |
| 95 | 3300025910 | Ga0207684_10061783 | Ga0207684_100617832 | 681 |
| 96 | 3300025922 | Ga0207646_10000135 | Ga0207646_10000135115 | 681 |
| 97 | 3300025922 | Ga0207646_10069362 | Ga0207646_100693623 | 681 |
| 98 | 3300035398 | Ga0316574_0020332 | Ga0316574_0020332_58_2124 | 681 |
| 99 | 3300039437 | Ga0436365_1429498 | Ga0436365_1429498_5628_7760 | 681 |
| 100 | 3300044684 | Ga0466966_0041460 | Ga0466966_0041460_323_2383 | 681 |
| 101 | 3300044693 | Ga0466961_0044014 | Ga0466961_0044014_167_2227 | 681 |
| 102 | 3300045049 | Ga0466959_0002192 | Ga0466959_0002192_5166_7226 | 681 |
| 103 | 3300045836 | Ga0466958_0004591 | Ga0466958_0004591_138_2213 | 681 |
| 104 | 3300048925 | Ga0496122_0000106 | Ga0496122_0000106_185910_187955 | 681 |
| 105 | 3300048926 | Ga0496123_0000022 | Ga0496123_0000022_174202_176247 | 681 |
| 106 | 3300049573 | Ga0501037_0066077 | Ga0501037_0066077_170_2227 | 681 |
| 107 | 3300049574 | Ga0501038_0032767 | Ga0501038_0032767_649_2703 | 681 |
| 108 | 3300049580 | Ga0501046_0023632 | Ga0501046_0023632_2817_4871 | 681 |
| 109 | 3300049587 | Ga0501071_0015995 | Ga0501071_0015995_2763_4820 | 681 |
| 110 | 3300049592 | Ga0501076_0020290 | Ga0501076_0020290_2597_4654 | 681 |
| 111 | 3300050491 | nmdc:mga00v17_3610_c1 | nmdc:mga00v17_3610_c1_5085_7148 | 681 |
| 112 | 3300050507 | nmdc:mga05p37_64958_c1 | nmdc:mga05p37_64958_c1_1139_3202 | 681 |
| 113 | 3300053091 | Ga0500647_0018449 | Ga0500647_0018449_487_2532 | 681 |
| 114 | 3300061734 | Ga0530510_0038795 | Ga0530510_0038795_895_2952 | 681 |
| 115 | 3300002704 | JGI25155J39150_1000046 | JGI25155J39150_10000468 | 682 |
| 116 | 3300002705 | JGI25156J39149_1000070 | JGI25156J39149_100007070 | 682 |
| 117 | 3300002738 | JGI25154J39366_1000092 | JGI25154J39366_10000928 | 682 |
| 118 | 3300002741 | JGI25157J39369_1000087 | JGI25157J39369_10000879 | 682 |
| 119 | 3300005336 | Ga0070680_100059540 | Ga0070680_1000595402 | 682 |
| 120 | 3300005347 | Ga0070668_100017677 | Ga0070668_1000176773 | 682 |
| 121 | 3300005353 | Ga0070669_100028876 | Ga0070669_1000288764 | 682 |
| 122 | 3300005354 | Ga0070675_100017271 | Ga0070675_1000172711 | 682 |
| 123 | 3300005356 | Ga0070674_100013265 | Ga0070674_1000132652 | 682 |
| 124 | 3300005441 | Ga0070700_100023646 | Ga0070700_1000236462 | 682 |
| 125 | 3300005459 | Ga0068867_100006659 | Ga0068867_1000066596 | 682 |
| 126 | 3300005543 | Ga0070672_100036498 | Ga0070672_1000364982 | 682 |
| 127 | 3300005840 | Ga0068870_10020656 | Ga0068870_100206563 | 682 |
| 128 | 3300005844 | Ga0068862_100002993 | Ga0068862_10000299310 | 682 |
| 129 | 3300006881 | Ga0068865_100004927 | Ga0068865_1000049274 | 682 |
| 130 | 3300009094 | Ga0111539_10014168 | Ga0111539_100141685 | 682 |
| 131 | 3300025206 | Ga0209435_100059 | Ga0209435_10005970 | 682 |
| 132 | 3300025246 | Ga0209646_1000179 | Ga0209646_10001798 | 682 |
| 133 | 3300025250 | Ga0209026_1000212 | Ga0209026_10002128 | 682 |
| 134 | 3300025256 | Ga0209759_1000246 | Ga0209759_10002468 | 682 |
| 135 | 3300025907 | Ga0207645_10016746 | Ga0207645_100167462 | 682 |
| 136 | 3300025908 | Ga0207643_10002118 | Ga0207643_100021183 | 682 |
| 137 | 3300025926 | Ga0207659_10054778 | Ga0207659_100547782 | 682 |
| 138 | 3300025933 | Ga0207706_10004881 | Ga0207706_100048812 | 682 |
| 139 | 3300025938 | Ga0207704_10008790 | Ga0207704_100087902 | 682 |
| 140 | 3300025940 | Ga0207691_10000307 | Ga0207691_1000030741 | 682 |
| 141 | 3300025972 | Ga0207668_10010757 | Ga0207668_100107574 | 682 |
| 142 | 3300026075 | Ga0207708_10015140 | Ga0207708_100151404 | 682 |
| 143 | 3300026089 | Ga0207648_10002642 | Ga0207648_100026429 | 682 |
| 144 | 3300026118 | Ga0207675_100001848 | Ga0207675_10000184810 | 682 |
| 145 | 3300027682 | Ga0209971_1000848 | Ga0209971_10008486 | 682 |
| 146 | 3300027717 | Ga0209998_10000548 | Ga0209998_100005489 | 682 |
| 147 | 3300027876 | Ga0209974_10001992 | Ga0209974_100019926 | 682 |
| 148 | 3300028380 | Ga0268265_10016286 | Ga0268265_100162864 | 682 |
| 149 | 3300031251 | Ga0265327_10008764 | Ga0265327_100087645 | 682 |
| 150 | 3300044693 | Ga0466961_0028481 | Ga0466961_0028481_1439_3544 | 682 |
| 151 | 3300044712 | Ga0453684_0148787 | Ga0453684_0148787_265_2394 | 682 |
| 152 | 3300045049 | Ga0466959_0055477 | Ga0466959_0055477_669_2774 | 682 |
| 153 | 3300045051 | Ga0451576_0006005 | Ga0451576_0006005_8662_10791 | 682 |
| 154 | 3300045836 | Ga0466958_0005350 | Ga0466958_0005350_160_2757 | 682 |
| 155 | 3300050511 | nmdc:mga08y16_123016_c1 | nmdc:mga08y16_123016_c1_187_2283 | 682 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3syt-assembly1.cif.gz_D-2 | crystal structure of glutamine-dependent nad+ synthetase from m. tuberculosis bound to amp/ppi, nad+, and glutamate | 0.9658 | 3 | 678 |
| 3seq-assembly1.cif.gz_D | crystal structure of c176a mutant of glutamine-dependent nad+ synthetase from m. tuberculosis in complex with ampcpp and naad+ | 0.9655 | 3 | 678 |
| 3dla-assembly1.cif.gz_D | x-ray crystal structure of glutamine-dependent nad+ synthetase from mycobacterium tuberculosis bound to naad+ and don | 0.9654 | 3 | 678 |
| 3szg-assembly1.cif.gz_A | crystal structure of c176a glutamine-dependent nad+ synthetase from m. tuberculosis bound to amp/ppi and naad+ | 0.965 | 3 | 678 |
| 3dla-assembly1.cif.gz_C-2 | x-ray crystal structure of glutamine-dependent nad+ synthetase from mycobacterium tuberculosis bound to naad+ and don | 0.9648 | 3 | 678 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3sezA01 | Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase | 0.9792 | 3 | 323 | 3.60.110.10 |
| 3sezA01 | Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase | 0.9702 | 3 | 323 | 3.60.110.10 |
| 3seqA02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.9638 | 325 | 544 | 3.40.50.620 |
| 3seqA02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.9594 | 325 | 544 | 3.40.50.620 |
| 3ilvA01 | Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase | 0.9405 | 12 | 276 | 3.60.110.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-J9FT43-F1-model_v4 | Glutamine-dependent NAD+ synthetase | 0.9977 | 13 | 106 |
GO:0003952
GO:0004359 GO:0005737 GO:0009435 |
| AF-A0A3D5P9Y1-F1-model_v4 | NAD(+) synthase | 0.997 | 13 | 123 |
GO:0003952
GO:0004359 GO:0005737 GO:0009435 |
| AF-A0A520C7V5-F1-model_v4 | NAD(+) synthase (EC 6.3.5.1) | 0.9953 | 7 | 138 |
GO:0003952
GO:0004359 GO:0005737 GO:0009435 |
| AF-A0A3M1FPN0-F1-model_v4 | NAD(+) synthase (EC 6.3.5.1) | 0.9945 | 4 | 95 |
GO:0003952
|
| AF-A0A847AW38-F1-model_v4 | NAD(+) synthase | 0.9909 | 13 | 124 |
GO:0003952
GO:0004359 GO:0005737 GO:0009435 |
Predicted Structure (AlphaFold2)
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