F221697

General Info

Members Datasets Scaffolds Average Seq Length
155 123 310 726

Family's Representative Sequence

Representative Sequence 3300005471|Ga0070698_100011885|Ga0070698_1000118856
Length 781
Sequence MKKENKYYLPGFVTTIKHLLRRTLERPVILLCNINRKDAKILKHKTHSKHSNFLCALANPLRLCVKPLLFLIISISVWQTSFSQTWIWYPGDYEIWLANKMENRRTDRGTFFPVFWKVDNHYVLMDFHKVFDLKEPEEVSIYAEGQYNVKLDGKPFEGTPAKIIVPAGKHKINIKVFCQEFVPAVYVKGKTIISNGTWLTTFEDKEWIDETGKTSDISATQWLNAGYSNFNDPLQPPSQFKLPVTPQQAANKQVNDNSILVDFGKETFGFIKLHGLKGKGNLTIYYGESKEEALSKEGAVTLDRLTIDNPSAKDSVMSLSKAFRYVNIVREGNVSFADVSMLYEYADIKDKGSFTCNDEEINKIYDIAKYTLHLSTREFFIDGIKRDRWVWSGDAYQSYLMNYYLMNDNRTVTSTMYALRGKDPVTGHINTIMDYTFYWFLGIYDYYLYSGDKSFIQQNYDRMKSLMDYVLGRRNQNGLLEGLPGDWIFIDWAAGLSKKGEVSFEQLLFARSLETMALCADIVNDKQGVLQYKTLAADLRKKLFSIYWNQQKQALVHSRVDGKQTENVTRYSNMFAIFFDYFNEQQKQAVKKSVLLNNKIQKITTPYMRFYELEALCAMGEQNYVLKEMKDYWGGMLKLGATSFWEEYNPEKKGAEHYAMYGREFGKSLCHAWGASPIYLLGKYYLGVKPTSAGYATYVVEPNLGGLQWMQGKVPTPNGEIELNVSTTEIKITGASGTGTLRFKSKLKPVAEAGTVVSKGNNLYEMKIEKDKSYIIRYNLN

Samples

Sample ID Description Type Environment
1 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
6 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
7 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
11 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
12 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
13 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
14 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
15 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
32 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
33 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
34 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
35 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
36 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
37 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
38 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
39 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
40 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
41 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
42 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
43 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
44 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
45 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
46 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
47 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
48 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
49 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
51 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
70 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
71 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
72 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
73 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
74 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
75 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
76 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
77 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
78 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
79 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
80 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
81 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
82 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
83 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
84 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
85 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
86 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
87 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
88 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
89 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
90 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
92 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
93 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
94 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
95 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
96 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
97 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
98 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
99 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
100 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
101 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
102 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
103 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
104 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
105 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
106 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
107 2738541278 Niastella sp. CF465 Isolate Unclassified
108 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
109 2818991444 Filimonas endophytica 3197 Isolate Unclassified
110 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
111 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
112 2914759650 Rhizosphaericola mali Isolate Rhizosphere
113 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
114 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
115 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
116 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
117 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
118 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
119 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
120 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
121 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
122 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
123 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 87.74
Metatranscriptomes 0
Isolates 12.26

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.77
Nodule 0
Rhizoplane 0.65
Rhizosphere 68.39
Stem 0
Stem Tuber 0
Unclassified 1.94

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070698_100011885 3300005471 Bacteria 9236
2 JGI24739J22299_10000587 3300001989 Bacteria 13102
3 JGI24737J22298_10000334 3300001990 Bacteria 15740
4 JGI24735J21928_10000029 3300002067 Bacteria 81143
5 JGI24751J29686_10000620 3300002459 Bacteria 9171
6 JGI25154J39366_1000002 3300002738 Bacteria 466942
7 rootH1_10084980 3300003316 Bacteria 8167
8 rootH2_10127620 3300003320 Bacteria 5373
9 rootH1_10008837 3300003323 Bacteria 37199
10 JGI25160J50197_1002312 3300003354 Bacteria 8932
11 Ga0055526_1004302 3300003771 Bacteria 8602
12 Ga0055528_1000339 3300003790 Bacteria 39168
13 Ga0055531_10000068 3300003794 Bacteria 112187
14 Ga0065165_1000022 3300005262 Bacteria 253404
15 Ga0065165_1005436 3300005262 Bacteria 7161
16 Ga0070666_10000029 3300005335 Bacteria 141568
17 Ga0068868_100010677 3300005338 Bacteria 6655
18 Ga0070671_100053062 3300005355 Bacteria 3370
19 Ga0070688_100024236 3300005365 Bacteria 3578
20 Ga0070667_100003094 3300005367 Bacteria 14311
21 Ga0070667_100007226 3300005367 Bacteria 9228
22 Ga0068867_100014571 3300005459 Bacteria 5571
23 Ga0070698_100000492 3300005471 Bacteria 41984
24 Ga0068855_100001483 3300005563 Bacteria 29355
25 Ga0068855_100059836 3300005563 Bacteria 4456
26 Ga0068859_100000035 3300005617 Bacteria 169846
27 Ga0068859_100079241 3300005617 Bacteria 3325
28 Ga0068859_100105022 3300005617 Bacteria 2884
29 Ga0068863_100029634 3300005841 Bacteria 5224
30 Ga0068863_100057483 3300005841 Unclassified 3681
31 Ga0068858_100001470 3300005842 Bacteria 24260
32 Ga0068860_100023294 3300005843 Bacteria 5985
33 Ga0075428_100012874 3300006844 Bacteria 9309
34 Ga0075428_100139385 3300006844 Bacteria 2637
35 Ga0075429_100002698 3300006880 Bacteria 14958
36 Ga0097620_100000035 3300006931 Bacteria 169846
37 Ga0097620_100079241 3300006931 Bacteria 3325
38 Ga0097620_100105022 3300006931 Bacteria 2884
39 Ga0105247_10002358 3300009101 Bacteria 12867
40 Ga0114129_10000792 3300009147 Bacteria 40543
41 Ga0105241_10000792 3300009174 Bacteria 24031
42 Ga0105241_10016945 3300009174 Bacteria 5348
43 Ga0105237_10001022 3300009545 Bacteria 37640
44 Ga0105237_10046553 3300009545 Unclassified 4363
45 Ga0105249_10001716 3300009553 Bacteria 19166
46 Ga0105249_10004548 3300009553 Bacteria 11981
47 Ga0105249_10026728 3300009553 Bacteria 5204
48 Ga0105246_10001406 3300011119 Bacteria 14236
49 Ga0157378_10012163 3300013297 Bacteria 7535
50 Ga0157378_10019939 3300013297 Bacteria 5897
51 Ga0163162_10010509 3300013306 Bacteria 9002
52 Ga0163162_10034595 3300013306 Bacteria 5029
53 Ga0157372_10022687 3300013307 Bacteria 6793
54 Ga0157372_10076268 3300013307 Bacteria 3785
55 Ga0157372_10132030 3300013307 Bacteria 2874
56 Ga0157375_10002844 3300013308 Bacteria 14979
57 Ga0163163_10046371 3300014325 Bacteria 4270
58 Ga0157379_10007615 3300014968 Bacteria 9376
59 Ga0157376_10006072 3300014969 Bacteria 8492
60 Ga0182005_1000219 3300015265 Bacteria 37730
61 Ga0163161_10007735 3300017792 Bacteria 7434
62 Ga0209646_1000005 3300025246 Bacteria 717627
63 Ga0209026_1000154 3300025250 Bacteria 108964
64 Ga0209673_1000049 3300025273 Bacteria 286207
65 Ga0209564_1001402 3300025295 Bacteria 24999
66 Ga0209758_1005930 3300025297 Bacteria 9079
67 Ga0209050_1000129 3300025298 Bacteria 186356
68 Ga0207426_1000150 3300025302 Bacteria 186352
69 Ga0207426_1002676 3300025302 Bacteria 10924
70 Ga0209257_1000001 3300025304 Bacteria 2274655
71 Ga0209257_1001011 3300025304 Bacteria 38022
72 Ga0207710_10003806 3300025900 Bacteria 6667
73 Ga0207680_10000049 3300025903 Bacteria 57625
74 Ga0207647_10016050 3300025904 Bacteria 5118
75 Ga0207705_10055821 3300025909 Bacteria 2848
76 Ga0207654_10003219 3300025911 Bacteria 8248
77 Ga0207671_10003708 3300025914 Bacteria 15056
78 Ga0207657_10043552 3300025919 Bacteria 3952
79 Ga0207652_10018746 3300025921 Bacteria 5680
80 Ga0207689_10000668 3300025942 Bacteria 32713
81 Ga0207667_10022474 3300025949 Bacteria 6966
82 Ga0207651_10033072 3300025960 Unclassified 3331
83 Ga0207712_10002528 3300025961 Bacteria 11763
84 Ga0207712_10007975 3300025961 Bacteria 6692
85 Ga0207668_10032542 3300025972 Bacteria 3447
86 Ga0207702_10040358 3300026078 Bacteria 3913
87 Ga0207641_10000043 3300026088 Bacteria 186340
88 Ga0207641_10029083 3300026088 Bacteria 4569
89 Ga0207648_10028181 3300026089 Bacteria 4981
90 Ga0268264_10033101 3300028381 Bacteria 4244
91 Ga0307515_10000002 3300028794 Bacteria 1231751
92 Ga0307515_10000036 3300028794 Bacteria 332188
93 Ga0265327_10000245 3300031251 Bacteria 108670
94 Ga0307513_10018537 3300031456 Bacteria 8314
95 Ga0307509_10024526 3300031507 Bacteria 6751
96 Ga0307408_100000655 3300031548 Bacteria 29072
97 Ga0307408_100001954 3300031548 Bacteria 14909
98 Ga0307412_10002309 3300031911 Bacteria 10556
99 Ga0439449_0005144 3300042007 Bacteria 5027
100 Ga0466969_0000052 3300044656 Bacteria 60425
101 Ga0466972_0000006 3300044658 Bacteria 282264
102 Ga0466970_0000207 3300044765 Bacteria 28755
103 Ga0466959_0000828 3300045049 Bacteria 18242
104 Ga0495650_0000025 3300046471 Bacteria 486001
105 Ga0495585_0000018 3300046492 Bacteria 162473
106 Ga0495606_0000026 3300046507 Bacteria 259118
107 Ga0495610_0000489 3300046512 Bacteria 40454
108 Ga0495648_0000945 3300046524 Bacteria 30095
109 Ga0495648_0001634 3300046524 Bacteria 21765
110 Ga0495625_0000008 3300046660 Bacteria 536165
111 Ga0495625_0000616 3300046660 Bacteria 51665
112 Ga0495625_0006479 3300046660 Bacteria 10406
113 Ga0495625_0006758 3300046660 Bacteria 10156
114 Ga0495649_0000006 3300046694 Bacteria 542188
115 Ga0495672_0010232 3300047320 Bacteria 6702
116 Ga0495687_000035 3300047443 Bacteria 255949
117 Ga0495687_003927 3300047443 Bacteria 10415
118 Ga0496126_0016416 3300048929 Bacteria 7406
119 Ga0501047_0025848 3300049581 Bacteria 5646
120 Ga0501198_001709 3300049649 Bacteria 2903
121 Ga0501225_0001959 3300049705 Bacteria 6440
122 Ga0501241_000239 3300049758 Bacteria 12280
123 nmdc:mga05p37_1784_c1 3300050507 Bacteria 25122
124 nmdc:mga0qj67_25201_c1 3300050509 Bacteria 4593
125 Ga0500578_0005051 3300053086 Bacteria 9072
126 Ga0500644_0010194 3300053088 Bacteria 2537
127 Ga0500644_0017714 3300053088 Bacteria 2074
128 Ga0500583_0000081 3300053092 Bacteria 55682
129 Ga0500583_0021961 3300053092 Bacteria 2665
130 Ga0500562_000004 3300053108 Bacteria 270087
131 Ga0500652_004144 3300053131 Bacteria 4457
132 Ga0500568_0000471 3300053139 Bacteria 29804
133 Ga0500616_0008340 3300053153 Bacteria 6447
134 Ga0500622_0001944 3300053156 Bacteria 15557
135 Ga0500622_0006570 3300053156 Bacteria 6715
136 Ga0500611_000005 3300053727 Bacteria 228837
137 2599480222 2599185184 Bacteria 6430550
138 2722730704 2721755487 Bacteria 6357185
139 2738729898 2738541278 Bacteria 9755573
140 2819572951 2818991442 Bacteria 8318214
141 2819590581 2818991444 Bacteria 6968812
142 2896319189 2896317667 Bacteria 4606601
143 2904783293 2904780799 Bacteria 5840761
144 2914761317 2914759650 Bacteria 4701441
145 2919180901 2919177583 Bacteria 5641607
146 2919441704 2919437846 Bacteria 6199444
147 2928083502 2928078545 Bacteria 6534839
148 2928151235 2928147474 Bacteria 6512076
149 2929155988 2929154850 Bacteria 6753285
150 2929244562 2929239360 Bacteria 7745570
151 2929927867 2929921140 Bacteria 8649150
152 2932084533 2932082852 Bacteria 6563563
153 2977235520 2977232053 Bacteria 5485925
154 3003235577 3003233435 Bacteria 4458031
155 8003152710 8003151029 Bacteria 8187759
156 Ga0070698_100011885
157 JGI24739J22299_10000587
158 JGI24737J22298_10000334
159 JGI24735J21928_10000029
160 JGI24751J29686_10000620
161 JGI25154J39366_1000002
162 rootH1_10084980
163 rootH2_10127620
164 rootH1_10008837
165 JGI25160J50197_1002312
166 Ga0055526_1004302
167 Ga0055528_1000339
168 Ga0055531_10000068
169 Ga0065165_1000022
170 Ga0065165_1005436
171 Ga0070666_10000029
172 Ga0068868_100010677
173 Ga0070671_100053062
174 Ga0070688_100024236
175 Ga0070667_100003094
176 Ga0070667_100007226
177 Ga0068867_100014571
178 Ga0070698_100000492
179 Ga0068855_100001483
180 Ga0068855_100059836
181 Ga0068859_100000035
182 Ga0068859_100079241
183 Ga0068859_100105022
184 Ga0068863_100029634
185 Ga0068863_100057483
186 Ga0068858_100001470
187 Ga0068860_100023294
188 Ga0075428_100012874
189 Ga0075428_100139385
190 Ga0075429_100002698
191 Ga0097620_100000035
192 Ga0097620_100079241
193 Ga0097620_100105022
194 Ga0105247_10002358
195 Ga0114129_10000792
196 Ga0105241_10000792
197 Ga0105241_10016945
198 Ga0105237_10001022
199 Ga0105237_10046553
200 Ga0105249_10001716
201 Ga0105249_10004548
202 Ga0105249_10026728
203 Ga0105246_10001406
204 Ga0157378_10012163
205 Ga0157378_10019939
206 Ga0163162_10010509
207 Ga0163162_10034595
208 Ga0157372_10022687
209 Ga0157372_10076268
210 Ga0157372_10132030
211 Ga0157375_10002844
212 Ga0163163_10046371
213 Ga0157379_10007615
214 Ga0157376_10006072
215 Ga0182005_1000219
216 Ga0163161_10007735
217 Ga0209646_1000005
218 Ga0209026_1000154
219 Ga0209673_1000049
220 Ga0209564_1001402
221 Ga0209758_1005930
222 Ga0209050_1000129
223 Ga0207426_1000150
224 Ga0207426_1002676
225 Ga0209257_1000001
226 Ga0209257_1001011
227 Ga0207710_10003806
228 Ga0207680_10000049
229 Ga0207647_10016050
230 Ga0207705_10055821
231 Ga0207654_10003219
232 Ga0207671_10003708
233 Ga0207657_10043552
234 Ga0207652_10018746
235 Ga0207689_10000668
236 Ga0207667_10022474
237 Ga0207651_10033072
238 Ga0207712_10002528
239 Ga0207712_10007975
240 Ga0207668_10032542
241 Ga0207702_10040358
242 Ga0207641_10000043
243 Ga0207641_10029083
244 Ga0207648_10028181
245 Ga0268264_10033101
246 Ga0307515_10000002
247 Ga0307515_10000036
248 Ga0265327_10000245
249 Ga0307513_10018537
250 Ga0307509_10024526
251 Ga0307408_100000655
252 Ga0307408_100001954
253 Ga0307412_10002309
254 Ga0439449_0005144
255 Ga0466969_0000052
256 Ga0466972_0000006
257 Ga0466970_0000207
258 Ga0466959_0000828
259 Ga0495650_0000025
260 Ga0495585_0000018
261 Ga0495606_0000026
262 Ga0495610_0000489
263 Ga0495648_0000945
264 Ga0495648_0001634
265 Ga0495625_0000008
266 Ga0495625_0000616
267 Ga0495625_0006479
268 Ga0495625_0006758
269 Ga0495649_0000006
270 Ga0495672_0010232
271 Ga0495687_000035
272 Ga0495687_003927
273 Ga0496126_0016416
274 Ga0501047_0025848
275 Ga0501198_001709
276 Ga0501225_0001959
277 Ga0501241_000239
278 nmdc:mga05p37_1784_c1
279 nmdc:mga0qj67_25201_c1
280 Ga0500578_0005051
281 Ga0500644_0010194
282 Ga0500644_0017714
283 Ga0500583_0000081
284 Ga0500583_0021961
285 Ga0500562_000004
286 Ga0500652_004144
287 Ga0500568_0000471
288 Ga0500616_0008340
289 Ga0500622_0001944
290 Ga0500622_0006570
291 Ga0500611_000005
292 2599480222
293 2722730704
294 2738729898
295 2819572951
296 2819590581
297 2896319189
298 2904783293
299 2914761317
300 2919180901
301 2919441704
302 2928083502
303 2928151235
304 2929155988
305 2929244562
306 2929927867
307 2932084533
308 2977235520
309 3003235577
310 8003152710

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21209

Bac_rhamnosid-like_N

Alpha-rhamnosidase-like, bacteroidetes, N-terminal

125

328

0.97

PF17389

Bac_rhamnosid6H

Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain

349

685

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
3cih-assembly1.cif.gz_A crystal structure of a putative alpha-rhamnosidase from bacteroides thetaiotaomicron 0.8641 27 721
3cih-assembly1.cif.gz_A crystal structure of a putative alpha-rhamnosidase from bacteroides thetaiotaomicron 0.8415 27 721
8hmm-assembly1.cif.gz_A crystal structure of aorhaa 0.7923 184 718
4xhc-assembly1.cif.gz_B rhamnosidase from klebsiella oxytoca with rhamnose bound 0.7801 184 626
8gm7-assembly2.cif.gz_B structure of apurinic/apyrimidinic dna lyase tk0353 from thermococcus kodakarensis (native crystal form) 0.7753 650 678
ID Description Score Start End Superfamily
af_Q4DSV3_173_279_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9121 450 488 1.25.40.10
3cihA02 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.8972 186 289 2.60.120.260
3w5mA06 Mainly Beta;Sandwich;Maltose phosphorylase, domain 3;Maltose phosphorylase, domain 3 0.8459 631 721 2.60.420.10
2okxB05 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.803 300 624 1.50.10.10
2okxB05 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.781 300 624 1.50.10.10
ID Description Score Start End GO Terms
AF-A0A1H4B164-F1-model_v4 Alpha-L-rhamnosidase 0.969 578 721 GO:0005975
AF-A0A519V9L0-F1-model_v4 Alpha-rhamnosidase 0.9681 604 722 GO:0005975
AF-A0A519V9L0-F1-model_v4 Alpha-rhamnosidase 0.9603 604 722 GO:0005975
AF-A0A7J0A6E9-F1-model_v4 Bacterial alpha-L-rhamnosidase 0.9599 377 721 GO:0005975
GO:0016787
AF-D4VL25-F1-model_v4 Alfa-L-rhamnosidase (EC 3.2.1.40) 0.9563 458 721 GO:0005975
GO:0030596

Map