F221815

General Info

Members Datasets Scaffolds Average Seq Length
155 102 310 465

Family's Representative Sequence

Representative Sequence 3300005718|Ga0068866_10009580|Ga0068866_100095802
Length 505
Sequence VSVPGAGSAGSSTRPTTGLVSNSAVCRTDSLSAVTRGYIVHTFGCQMNEHDSERIAGLLEDDGYVAVTDQADADVVVLNTCCIRENADNKLYGTLGWLKPWKEASDGRQIVVAGCLAQKDRDLVRRKAPFVDVVLGTHNVHRAAELVGEARVSGPITEILDEAVLDDQAMFPSALPARRETTYNAWVTIQIGCDNSCAFCIVPAVRGAEISRPFADVIAEVARLADEGVSEVTLLGQNVNSYGRDIQLAARQGGDAEARLRPMFAELLSAVGAIDGIRRVRFTSPHPKDMRADTFAAMAGTAAVCEHLHYPLQSGSDRVLAAMHRGYTAQRYLERLAAGRAAVDDLAVSTDIIVGFPGETDDDFAATLDVVAAAEYDYAYTFVFSPRPGTEAAEMTDRFVEPSVAAERFQRLKVVVERSALAKHEARVGRVEEVLVEGPSKKDPAVLAGRTRQNKLVHFTPPHSLRAGAYATVEITRAAPHHLVGQFVELISQPQHKRRIAVLAG

Samples

Sample ID Description Type Environment
1 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
4 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
5 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
6 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
7 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
8 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
9 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
10 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
11 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
12 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
13 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
14 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
15 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
16 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
17 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
18 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
19 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
21 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
22 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
23 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
24 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
25 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
26 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
27 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
28 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
35 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
36 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
37 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
38 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
39 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
40 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
41 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
42 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
43 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
44 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
45 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
46 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
47 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
48 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
49 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
50 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
51 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
52 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
53 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
54 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
55 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
56 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
57 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
58 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
59 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
60 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
61 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
62 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
63 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
64 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
66 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
68 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
69 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
75 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
76 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
77 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
78 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
79 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
80 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
81 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
82 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
83 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
84 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
85 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
86 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
89 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
90 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
91 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
92 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
93 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
94 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
95 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
96 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
97 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
98 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
99 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
100 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
101 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
102 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.97
Nodule 0
Rhizoplane 5.81
Rhizosphere 78.71
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068866_10009580 3300005718 Bacteria 4118
2 JGI25407J50210_10004198 3300003373 Bacteria 3505
3 Ga0070688_100059538 3300005365 Bacteria 2409
4 Ga0068859_100284646 3300005617 Bacteria 1746
5 Ga0068860_100012487 3300005843 Bacteria 8365
6 Ga0081455_10002256 3300005937 Bacteria 22967
7 Ga0081538_10002793 3300005981 Bacteria 16726
8 Ga0075365_10010633 3300006038 Bacteria 5373
9 Ga0075365_10045019 3300006038 Bacteria 2893
10 Ga0075365_10050726 3300006038 Bacteria 2738
11 Ga0075363_100058923 3300006048 Bacteria 2063
12 Ga0075364_10023626 3300006051 Bacteria 3894
13 Ga0075364_10077231 3300006051 Bacteria 2198
14 Ga0075362_10045999 3300006177 Bacteria 1940
15 Ga0075362_10054609 3300006177 Bacteria 1796
16 Ga0075428_100006582 3300006844 Bacteria 12923
17 Ga0075428_100013100 3300006844 Bacteria 9221
18 Ga0075428_100116868 3300006844 Bacteria 2905
19 Ga0075428_100232694 3300006844 Bacteria 1988
20 Ga0075430_100002592 3300006846 Bacteria 15086
21 Ga0075430_100021634 3300006846 Bacteria 5465
22 Ga0075431_100010603 3300006847 Bacteria 9268
23 Ga0075431_100018475 3300006847 Bacteria 7100
24 Ga0075431_100021796 3300006847 Bacteria 6550
25 Ga0075429_100000255 3300006880 Bacteria 36827
26 Ga0097620_100284622 3300006931 Bacteria 1746
27 Ga0111539_10001536 3300009094 Bacteria 30730
28 Ga0105245_10033403 3300009098 Bacteria 4560
29 Ga0114129_10020368 3300009147 Bacteria 9435
30 Ga0105243_10025374 3300009148 Bacteria 4529
31 Ga0105242_10100010 3300009176 Bacteria 2455
32 Ga0105248_10026222 3300009177 Bacteria 6485
33 Ga0157378_10021983 3300013297 Bacteria 5610
34 Ga0157378_10070281 3300013297 Bacteria 3143
35 Ga0157375_10209263 3300013308 Bacteria 2107
36 Ga0157380_10080727 3300014326 Bacteria 2659
37 Ga0157379_10016171 3300014968 Bacteria 6564
38 Ga0213876_10029091 3300021384 Bacteria 2913
39 Ga0207687_10059856 3300025927 Bacteria 2685
40 Ga0207679_10169403 3300025945 Bacteria 1796
41 Ga0207668_10229913 3300025972 Bacteria 1495
42 Ga0207641_10057046 3300026088 Bacteria 3321
43 Ga0207648_10010528 3300026089 Bacteria 8758
44 Ga0207675_100021116 3300026118 Bacteria 6068
45 Ga0207675_100055550 3300026118 Bacteria 3694
46 Ga0207428_10055011 3300027907 Bacteria 3166
47 Ga0307517_10053475 3300028786 Bacteria 4020
48 Ga0316576_10047386 3300031727 Bacteria 3114
49 Ga0316576_10054753 3300031727 Bacteria 2910
50 Ga0316578_10006599 3300031728 Bacteria 5745
51 Ga0307413_10086682 3300031824 Bacteria 2025
52 Ga0307407_10030366 3300031903 Bacteria 2915
53 Ga0307409_100066162 3300031995 Bacteria 2848
54 Ga0373948_0001480 3300034817 Bacteria 3268
55 Ga0373932_0000418 3300035112 Bacteria 12995
56 Ga0316574_0031420 3300035398 Bacteria 3221
57 Ga0373931_0000010 3300035691 Bacteria 334069
58 Ga0373931_0000183 3300035691 Bacteria 27090
59 Ga0316584_0004575 3300036712 Bacteria 9168
60 Ga0316584_0154421 3300036712 Bacteria 1707
61 Ga0400483_055783 3300039062 Bacteria 2297
62 Ga0400483_122074 3300039062 Bacteria 27519
63 Ga0400483_156489 3300039062 Bacteria 5713
64 Ga0400483_274169 3300039062 Bacteria 27465
65 Ga0436365_0911773 3300039437 Bacteria 9397
66 Ga0495629_0123978 3300046459 Bacteria 1800
67 Ga0495651_0057233 3300046462 Bacteria 2993
68 Ga0495608_0019805 3300046511 Bacteria 4627
69 Ga0495630_0097119 3300046517 Bacteria 2228
70 Ga0495587_0014528 3300046536 Bacteria 4937
71 Ga0495634_0030389 3300046642 Bacteria 3731
72 Ga0495657_0009117 3300046675 Bacteria 7538
73 Ga0495672_0021104 3300047320 Bacteria 4253
74 Ga0495680_0014332 3300047322 Bacteria 6871
75 Ga0496100_0058614 3300048903 Bacteria 2528
76 Ga0496105_0007372 3300048908 Bacteria 8513
77 Ga0496108_0094638 3300048911 Bacteria 2543
78 Ga0496109_0059372 3300048912 Bacteria 3494
79 Ga0496109_0261522 3300048912 Bacteria 1630
80 Ga0496110_0014510 3300048913 Bacteria 6546
81 Ga0496111_0003630 3300048914 Bacteria 9570
82 Ga0496114_0007981 3300048917 Bacteria 8374
83 Ga0496114_0024773 3300048917 Bacteria 4899
84 Ga0501031_0019334 3300049568 Bacteria 4436
85 Ga0501031_0084889 3300049568 Bacteria 2064
86 Ga0501034_0014954 3300049571 Bacteria 7982
87 Ga0501034_0104872 3300049571 Bacteria 2820
88 Ga0501037_0004595 3300049573 Bacteria 10034
89 Ga0501038_0011372 3300049574 Bacteria 8123
90 Ga0501039_0020905 3300049575 Bacteria 5018
91 Ga0501039_0069953 3300049575 Bacteria 2726
92 Ga0501040_0026433 3300049576 Bacteria 3904
93 Ga0501040_0048238 3300049576 Bacteria 2911
94 Ga0501040_0049318 3300049576 Bacteria 2878
95 Ga0501040_0114989 3300049576 Bacteria 1884
96 Ga0501040_0144882 3300049576 Bacteria 1674
97 Ga0501041_0021316 3300049577 Bacteria 3883
98 Ga0501042_0045191 3300049578 Bacteria 3139
99 Ga0501046_0032370 3300049580 Bacteria 4234
100 Ga0501048_0060499 3300049582 Bacteria 2684
101 Ga0501048_0141601 3300049582 Bacteria 1700
102 Ga0501068_0004571 3300049584 Bacteria 7525
103 Ga0501068_0006338 3300049584 Bacteria 6518
104 Ga0501068_0104678 3300049584 Bacteria 1756
105 Ga0501069_0000015 3300049585 Bacteria 144828
106 Ga0501070_0000005 3300049586 Bacteria 250033
107 Ga0501070_0000527 3300049586 Bacteria 35102
108 Ga0501070_0001877 3300049586 Bacteria 18571
109 Ga0501070_0090007 3300049586 Bacteria 2540
110 Ga0501071_0015372 3300049587 Bacteria 5254
111 Ga0501071_0019916 3300049587 Bacteria 4659
112 Ga0501071_0025555 3300049587 Bacteria 4138
113 Ga0501071_0040420 3300049587 Bacteria 3337
114 Ga0501071_0060738 3300049587 Bacteria 2737
115 Ga0501072_0005815 3300049588 Bacteria 9395
116 Ga0501072_0019673 3300049588 Bacteria 5222
117 Ga0501072_0029604 3300049588 Bacteria 4278
118 Ga0501073_0000661 3300049589 Bacteria 24171
119 Ga0501073_0002444 3300049589 Bacteria 13872
120 Ga0501074_0007756 3300049590 Bacteria 7771
121 Ga0501075_0048228 3300049591 Bacteria 3201
122 Ga0501075_0083145 3300049591 Bacteria 2425
123 Ga0501076_0038518 3300049592 Bacteria 3753
124 Ga0501076_0065039 3300049592 Bacteria 2907
125 Ga0501079_0036112 3300049741 Bacteria 3806
126 Ga0501079_0045328 3300049741 Bacteria 3394
127 Ga0501080_0003181 3300049742 Bacteria 14474
128 Ga0501080_0005441 3300049742 Bacteria 11359
129 Ga0501081_0007021 3300049743 Bacteria 7321
130 Ga0501081_0159957 3300049743 Bacteria 1622
131 Ga0501035_0080101 3300049822 Bacteria 2884
132 Ga0501044_0000493 3300049823 Bacteria 47877
133 Ga0501045_0003270 3300049824 Bacteria 11075
134 nmdc:mga03683_3889_c1 3300050489 Bacteria 4882
135 nmdc:mga00v17_11280_c1 3300050491 Bacteria 4911
136 nmdc:mga00v17_13985_c1 3300050491 Bacteria 4469
137 nmdc:mga0yw44_108867_c1 3300050492 Bacteria 1773
138 nmdc:mga0yw44_23744_c1 3300050492 Bacteria 3459
139 nmdc:mga0yw44_41008_c1 3300050492 Bacteria 2754
140 nmdc:mga0yw44_4174_c1 3300050492 Bacteria 6570
141 nmdc:mga05p37_11430_c1 3300050507 Bacteria 10569
142 nmdc:mga09592_15592_c1 3300050508 Bacteria 6210
143 nmdc:mga0qj67_48250_c1 3300050509 Bacteria 3364
144 nmdc:mga0qj67_70802_c1 3300050509 Bacteria 2783
145 nmdc:mga06r32_6783_c1 3300050510 Bacteria 10291
146 nmdc:mga08y16_360372_c1 3300050511 Bacteria 1493
147 nmdc:mga0rr50_34851_c1 3300050513 Bacteria 3608
148 Ga0495601_0090702 3300053077 Bacteria 1967
149 Ga0500616_0000820 3300053153 Bacteria 35228
150 Ga0500616_0008520 3300053153 Bacteria 6357
151 Ga0501084_0004786 3300054114 Bacteria 11064
152 Ga0501082_0047867 3300060353 Bacteria 3685
153 Ga0501082_0105721 3300060353 Bacteria 2435
154 Ga0501082_0178479 3300060353 Bacteria 1847
155 Ga0530510_0029443 3300061734 Bacteria 3941
156 Ga0068866_10009580
157 JGI25407J50210_10004198
158 Ga0070688_100059538
159 Ga0068859_100284646
160 Ga0068860_100012487
161 Ga0081455_10002256
162 Ga0081538_10002793
163 Ga0075365_10010633
164 Ga0075365_10045019
165 Ga0075365_10050726
166 Ga0075363_100058923
167 Ga0075364_10023626
168 Ga0075364_10077231
169 Ga0075362_10045999
170 Ga0075362_10054609
171 Ga0075428_100006582
172 Ga0075428_100013100
173 Ga0075428_100116868
174 Ga0075428_100232694
175 Ga0075430_100002592
176 Ga0075430_100021634
177 Ga0075431_100010603
178 Ga0075431_100018475
179 Ga0075431_100021796
180 Ga0075429_100000255
181 Ga0097620_100284622
182 Ga0111539_10001536
183 Ga0105245_10033403
184 Ga0114129_10020368
185 Ga0105243_10025374
186 Ga0105242_10100010
187 Ga0105248_10026222
188 Ga0157378_10021983
189 Ga0157378_10070281
190 Ga0157375_10209263
191 Ga0157380_10080727
192 Ga0157379_10016171
193 Ga0213876_10029091
194 Ga0207687_10059856
195 Ga0207679_10169403
196 Ga0207668_10229913
197 Ga0207641_10057046
198 Ga0207648_10010528
199 Ga0207675_100021116
200 Ga0207675_100055550
201 Ga0207428_10055011
202 Ga0307517_10053475
203 Ga0316576_10047386
204 Ga0316576_10054753
205 Ga0316578_10006599
206 Ga0307413_10086682
207 Ga0307407_10030366
208 Ga0307409_100066162
209 Ga0373948_0001480
210 Ga0373932_0000418
211 Ga0316574_0031420
212 Ga0373931_0000010
213 Ga0373931_0000183
214 Ga0316584_0004575
215 Ga0316584_0154421
216 Ga0400483_055783
217 Ga0400483_122074
218 Ga0400483_156489
219 Ga0400483_274169
220 Ga0436365_0911773
221 Ga0495629_0123978
222 Ga0495651_0057233
223 Ga0495608_0019805
224 Ga0495630_0097119
225 Ga0495587_0014528
226 Ga0495634_0030389
227 Ga0495657_0009117
228 Ga0495672_0021104
229 Ga0495680_0014332
230 Ga0496100_0058614
231 Ga0496105_0007372
232 Ga0496108_0094638
233 Ga0496109_0059372
234 Ga0496109_0261522
235 Ga0496110_0014510
236 Ga0496111_0003630
237 Ga0496114_0007981
238 Ga0496114_0024773
239 Ga0501031_0019334
240 Ga0501031_0084889
241 Ga0501034_0014954
242 Ga0501034_0104872
243 Ga0501037_0004595
244 Ga0501038_0011372
245 Ga0501039_0020905
246 Ga0501039_0069953
247 Ga0501040_0026433
248 Ga0501040_0048238
249 Ga0501040_0049318
250 Ga0501040_0114989
251 Ga0501040_0144882
252 Ga0501041_0021316
253 Ga0501042_0045191
254 Ga0501046_0032370
255 Ga0501048_0060499
256 Ga0501048_0141601
257 Ga0501068_0004571
258 Ga0501068_0006338
259 Ga0501068_0104678
260 Ga0501069_0000015
261 Ga0501070_0000005
262 Ga0501070_0000527
263 Ga0501070_0001877
264 Ga0501070_0090007
265 Ga0501071_0015372
266 Ga0501071_0019916
267 Ga0501071_0025555
268 Ga0501071_0040420
269 Ga0501071_0060738
270 Ga0501072_0005815
271 Ga0501072_0019673
272 Ga0501072_0029604
273 Ga0501073_0000661
274 Ga0501073_0002444
275 Ga0501074_0007756
276 Ga0501075_0048228
277 Ga0501075_0083145
278 Ga0501076_0038518
279 Ga0501076_0065039
280 Ga0501079_0036112
281 Ga0501079_0045328
282 Ga0501080_0003181
283 Ga0501080_0005441
284 Ga0501081_0007021
285 Ga0501081_0159957
286 Ga0501035_0080101
287 Ga0501044_0000493
288 Ga0501045_0003270
289 nmdc:mga03683_3889_c1
290 nmdc:mga00v17_11280_c1
291 nmdc:mga00v17_13985_c1
292 nmdc:mga0yw44_108867_c1
293 nmdc:mga0yw44_23744_c1
294 nmdc:mga0yw44_41008_c1
295 nmdc:mga0yw44_4174_c1
296 nmdc:mga05p37_11430_c1
297 nmdc:mga09592_15592_c1
298 nmdc:mga0qj67_48250_c1
299 nmdc:mga0qj67_70802_c1
300 nmdc:mga06r32_6783_c1
301 nmdc:mga08y16_360372_c1
302 nmdc:mga0rr50_34851_c1
303 Ga0495601_0090702
304 Ga0500616_0000820
305 Ga0500616_0008520
306 Ga0501084_0004786
307 Ga0501082_0047867
308 Ga0501082_0105721
309 Ga0501082_0178479
310 Ga0530510_0029443

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00919

UPF0004

Uncharacterized protein family UPF0004

37

136

0.96

PF01938

TRAM

TRAM domain

425

488

0.93

PF04055

Radical_SAM

Radical SAM superfamily

187

371

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qgq-assembly4.cif.gz_D crystal structure of tm_1862 from thermotoga maritima. northeast structural genomics consortium target vr77 0.921 150 456
2qgq-assembly1.cif.gz_A crystal structure of tm_1862 from thermotoga maritima. northeast structural genomics consortium target vr77 0.92 151 456
2qgq-assembly4.cif.gz_D crystal structure of tm_1862 from thermotoga maritima. northeast structural genomics consortium target vr77 0.9177 150 456
7mjx-assembly1.cif.gz_A miab in the complex with 5'-deoxyadenosine, methionine and rna 0.9145 4 456
2qgq-assembly1.cif.gz_A crystal structure of tm_1862 from thermotoga maritima. northeast structural genomics consortium target vr77 0.9102 151 456
ID Description Score Start End Superfamily
af_P0AEI1_3_129_3.40.50.12160 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Methylthiotransferase, N-terminal domain 0.9677 4 129 3.40.50.12160
af_P9WK05_59_189_3.40.50.12160 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Methylthiotransferase, N-terminal domain 0.9656 6 130 3.40.50.12160
af_Q2FZ02_69_199_3.40.50.12160 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Methylthiotransferase, N-terminal domain 0.9616 6 129 3.40.50.12160
af_Q2FZ02_212_444_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.9554 153 388 3.80.30.20
af_P0AEI1_3_129_3.40.50.12160 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Methylthiotransferase, N-terminal domain 0.953 4 129 3.40.50.12160
ID Description Score Start End GO Terms
AF-A0A3D5UHL2-F1-model_v4 deleted 0.9741 4 118
AF-A0A6N6S7Z2-F1-model_v4 MTTase N-terminal domain-containing protein 0.9734 4 129 GO:0005829
GO:0035597
GO:0046872
GO:0051539
AF-A0A376UDL7-F1-model_v4 tRNA-i(6)A37 thiotransferase enzyme MiaB (EC 2.-.-.-) 0.9705 4 104 GO:0005829
GO:0035597
GO:0046872
GO:0051539
AF-A0A855X3C7-F1-model_v4 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase (EC 2.8.4.3) 0.9665 251 456 GO:0005829
GO:0035597
GO:0046872
GO:0051539
AF-A0A2N5ABG4-F1-model_v4 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.9663 4 100 GO:0005829
GO:0035597
GO:0046872
GO:0051539

Map