F223375

General Info

Members Datasets Scaffolds Average Seq Length
155 71 310 281

Family's Representative Sequence

Representative Sequence 3300050508|nmdc:mga09592_249215_c1|nmdc:mga09592_249215_c1_190_1110
Length 306
Sequence MDKSARELDFSIQHSDTNIRIIRGIMTKTILAVLAHPDDESFGLGGTLALYAQKGYDTYLICATRGEVGTVDAEYLNGFKDTAELRTAELNRAAKILDLKDVFILDYRDSGMPGTEENKHPDAQINHSIEEVAVKVLTYIRQLKPDVVITFDPIGGYKHPDHIHIHKATVFAFENADDPSFHPEAGEPFKPRALYYQVFSRRILRLMVRLMPLFGQDPTKFGRNKDVNLKELAEVDFPVHVQVDITPVSHIKQEAGRQHASQGGAQMRRGWMGWMTRLFSEREEFMRAYPPVKNGRTKIAHDLFPQ

Samples

Sample ID Description Type Environment
1 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
2 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
3 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
35 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
36 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
41 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
42 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
43 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
44 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
45 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
46 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
47 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
48 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
49 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
50 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
51 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
52 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
53 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
54 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
55 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
56 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
57 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
58 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
59 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
60 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
61 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
62 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
63 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
64 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
65 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
66 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
67 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
68 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
69 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
70 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
71 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.71
Metatranscriptomes 1.29
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 100
Stem 0
Stem Tuber 0
Unclassified 23.87

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga09592_249215_c1 3300050508 Unclassified 1539
2 SwRhRL3b_contig_4066724 2162886006 Bacteria 1419
3 SwRhRL2b_contig_581341 2162886007 Bacteria 11097
4 JGI25406J46586_10004154 3300003203 Bacteria 6756
5 Ga0065704_10000443 3300005289 Bacteria 21010
6 Ga0065707_10017123 3300005295 Bacteria 2069
7 Ga0065707_10082128 3300005295 Bacteria 21253
8 Ga0065707_10110615 3300005295 Unclassified 2423
9 Ga0070705_100040643 3300005440 Bacteria 2646
10 Ga0070694_100077410 3300005444 Bacteria 2304
11 Ga0070708_100033675 3300005445 Bacteria 4452
12 Ga0068867_100139089 3300005459 Bacteria 1896
13 Ga0070706_100089042 3300005467 Bacteria 2862
14 Ga0070706_100154478 3300005467 Unclassified 2142
15 Ga0070707_100135733 3300005468 Archaea 2393
16 Ga0070707_100155851 3300005468 Bacteria 2225
17 Ga0070698_100078588 3300005471 Bacteria 3298
18 Ga0070698_100157617 3300005471 Unclassified 2215
19 Ga0070698_100359605 3300005471 Bacteria 1387
20 Ga0070699_100001393 3300005518 Bacteria 22220
21 Ga0070699_100016318 3300005518 Bacteria 6377
22 Ga0070699_100039688 3300005518 Unclassified 4076
23 Ga0070697_100086126 3300005536 Bacteria 2592
24 Ga0070697_100520581 3300005536 Bacteria 1041
25 Ga0070695_100074850 3300005545 Bacteria 2226
26 Ga0070696_100379412 3300005546 Bacteria 1101
27 Ga0070704_100329538 3300005549 Bacteria 1282
28 Ga0068859_100169551 3300005617 Bacteria 2264
29 Ga0068859_100248428 3300005617 Bacteria 1869
30 Ga0068864_100140337 3300005618 Unclassified 2179
31 Ga0068861_100041314 3300005719 Unclassified 3454
32 Ga0068862_100200822 3300005844 Bacteria 1798
33 Ga0068862_100277823 3300005844 Bacteria 1534
34 Ga0068862_100403216 3300005844 Bacteria 1280
35 Ga0081539_10002751 3300005985 Bacteria 23695
36 Ga0075427_10003741 3300006194 Bacteria 2117
37 Ga0075428_100028573 3300006844 Bacteria 6169
38 Ga0075428_100236889 3300006844 Bacteria 1969
39 Ga0075428_100335943 3300006844 Bacteria 1623
40 Ga0075428_100416440 3300006844 Bacteria 1440
41 Ga0075430_100068024 3300006846 Bacteria 2989
42 Ga0075430_100227065 3300006846 Bacteria 1549
43 Ga0075431_100237365 3300006847 Bacteria 1856
44 Ga0075431_100237859 3300006847 Bacteria 1853
45 Ga0075431_100457499 3300006847 Unclassified 1271
46 Ga0075433_10009679 3300006852 Bacteria 7715
47 Ga0075434_100170311 3300006871 Bacteria 2198
48 Ga0075429_100008172 3300006880 Bacteria 9094
49 Ga0075429_100091231 3300006880 Bacteria 2658
50 Ga0075429_100110787 3300006880 Bacteria 2399
51 Ga0075429_100163656 3300006880 Unclassified 1948
52 Ga0097620_100169542 3300006931 Bacteria 2264
53 Ga0097620_100248442 3300006931 Bacteria 1869
54 Ga0111539_10022795 3300009094 Bacteria 7691
55 Ga0114129_10033226 3300009147 Bacteria 7291
56 Ga0114129_10075046 3300009147 Bacteria 4708
57 Ga0114129_10094105 3300009147 Unclassified 4150
58 Ga0114129_10252712 3300009147 Unclassified 2365
59 Ga0114129_10323435 3300009147 Unclassified 2050
60 Ga0114129_10690293 3300009147 Unclassified 1313
61 Ga0105243_10395164 3300009148 Bacteria 1283
62 Ga0105243_10415547 3300009148 Bacteria 1253
63 Ga0157380_10208245 3300014326 Bacteria 1741
64 Ga0207684_10360395 3300025910 Unclassified 1251
65 Ga0207712_10085326 3300025961 Bacteria 2310
66 Ga0207675_100063201 3300026118 Bacteria 3459
67 Ga0268265_10223350 3300028380 Unclassified 1650
68 Ga0265323_10013740 3300028653 Bacteria 3222
69 Ga0265340_10009081 3300031247 Bacteria 5346
70 Ga0316575_10012560 3300031665 Unclassified 3153
71 Ga0316575_10013706 3300031665 Bacteria 3032
72 Ga0316579_10003636 3300031691 Bacteria 6057
73 Ga0316576_10108978 3300031727 Unclassified 2075
74 Ga0316576_10259473 3300031727 Bacteria 1304
75 Ga0316578_10039602 3300031728 Bacteria 2722
76 Ga0316578_10060998 3300031728 Unclassified 2221
77 Ga0307405_10544178 3300031731 Bacteria 938
78 Ga0316577_10021249 3300031733 Unclassified 3600
79 Ga0307413_10068342 3300031824 Bacteria 2225
80 Ga0307410_10053616 3300031852 Bacteria 2730
81 Ga0316583_10033522 3300032133 Unclassified 1824
82 Ga0316585_10040119 3300032137 Bacteria 1490
83 Ga0316593_10105259 3300032168 Bacteria 1004
84 Ga0316596_1026210 3300033541 Unclassified 1502
85 Ga0316574_0077381 3300035398 Unclassified 2108
86 Ga0316582_0034242 3300036647 Unclassified 3127
87 Ga0316582_0218163 3300036647 Bacteria 1304
88 Ga0316582_0418565 3300036647 Bacteria 923
89 Ga0316584_0028316 3300036712 Unclassified 4130
90 Ga0316584_0047963 3300036712 Unclassified 3191
91 Ga0316584_0088411 3300036712 Bacteria 2320
92 Ga0316584_0129123 3300036712 Bacteria 1888
93 Ga0316581_0024915 3300037588 Unclassified 1777
94 Ga0451577_0004622 3300042876 Bacteria 14459
95 Ga0451577_0014816 3300042876 Bacteria 7264
96 Ga0451577_0021298 3300042876 Bacteria 5934
97 Ga0451577_0079296 3300042876 Unclassified 2927
98 Ga0451577_0085052 3300042876 Bacteria 2822
99 Ga0451577_0085161 3300042876 Unclassified 2820
100 Ga0451577_0298256 3300042876 Bacteria 1461
101 Ga0451577_0564078 3300042876 Bacteria 1033
102 Ga0453683_0000200 3300044673 Bacteria 81336
103 Ga0453683_0021649 3300044673 Bacteria 4102
104 Ga0453683_0059346 3300044673 Bacteria 2392
105 Ga0453683_0148777 3300044673 Viruses 1479
106 Ga0453683_0230279 3300044673 Unclassified 1179
107 Ga0453684_0000007 3300044712 Bacteria 1301482
108 Ga0453684_0000271 3300044712 Bacteria 223654
109 Ga0453684_0000435 3300044712 Bacteria 170233
110 Ga0453684_0000564 3300044712 Bacteria 139611
111 Ga0453684_0001473 3300044712 Bacteria 66422
112 Ga0453684_0002905 3300044712 Bacteria 40159
113 Ga0453684_0003806 3300044712 Bacteria 33293
114 Ga0453684_0054948 3300044712 Bacteria 5181
115 Ga0453684_0068170 3300044712 Bacteria 4519
116 Ga0453684_0069211 3300044712 Bacteria 4477
117 Ga0453684_0073654 3300044712 Bacteria 4304
118 Ga0453684_0081400 3300044712 Bacteria 4038
119 Ga0453684_0206594 3300044712 Bacteria 2285
120 Ga0453684_0291792 3300044712 Bacteria 1857
121 Ga0453684_0307690 3300044712 Bacteria 1799
122 Ga0453684_0361683 3300044712 Bacteria 1634
123 Ga0453684_0369143 3300044712 Unclassified 1614
124 Ga0453684_0452765 3300044712 Unclassified 1428
125 Ga0453684_0719396 3300044712 Bacteria 1083
126 Ga0451576_0000164 3300045051 Bacteria 168460
127 Ga0451576_0000976 3300045051 Bacteria 53203
128 Ga0451576_0015589 3300045051 Bacteria 8413
129 Ga0451576_0047657 3300045051 Bacteria 4504
130 Ga0451576_0061799 3300045051 Bacteria 3906
131 Ga0451576_0259261 3300045051 Bacteria 1817
132 Ga0451576_0464377 3300045051 Unclassified 1329
133 Ga0451576_0688677 3300045051 Unclassified 1074
134 Ga0451576_0770661 3300045051 Unclassified 1010
135 Ga0451576_1163734 3300045051 Bacteria 806
136 Ga0501298_006152 3300049521 Bacteria 1954
137 Ga0501071_0254702 3300049587 Bacteria 1325
138 Ga0501075_0061603 3300049591 Bacteria 2828
139 Ga0501075_0144988 3300049591 Bacteria 1810
140 Ga0501075_0233534 3300049591 Bacteria 1402
141 Ga0501077_0226948 3300049593 Bacteria 1187
142 nmdc:mga05p37_16928_c1 3300050507 Bacteria 8790
143 nmdc:mga05p37_215538_c1 3300050507 Bacteria 2319
144 nmdc:mga05p37_234779_c1 3300050507 Bacteria 2208
145 nmdc:mga05p37_48197_c1 3300050507 Bacteria 5241
146 nmdc:mga05p37_748326_c1 3300050507 Unclassified 1078
147 nmdc:mga09592_101548_c1 3300050508 Bacteria 2464
148 nmdc:mga09592_300871_c1 3300050508 Bacteria 1391
149 nmdc:mga0qj67_345352_c1 3300050509 Bacteria 1203
150 nmdc:mga06r32_510316_c1 3300050510 Unclassified 1179
151 nmdc:mga06r32_558329_c1 3300050510 Unclassified 1118
152 nmdc:mga0a205_119968_c1 3300050515 Bacteria 2529
153 nmdc:mga0a205_554151_c1 3300050515 Bacteria 1005
154 Ga0501084_0041183 3300054114 Bacteria 3864
155 Ga0530510_0042776 3300061734 Bacteria 3273
156 nmdc:mga09592_249215_c1
157 SwRhRL3b_contig_4066724
158 SwRhRL2b_contig_581341
159 JGI25406J46586_10004154
160 Ga0065704_10000443
161 Ga0065707_10017123
162 Ga0065707_10082128
163 Ga0065707_10110615
164 Ga0070705_100040643
165 Ga0070694_100077410
166 Ga0070708_100033675
167 Ga0068867_100139089
168 Ga0070706_100089042
169 Ga0070706_100154478
170 Ga0070707_100135733
171 Ga0070707_100155851
172 Ga0070698_100078588
173 Ga0070698_100157617
174 Ga0070698_100359605
175 Ga0070699_100001393
176 Ga0070699_100016318
177 Ga0070699_100039688
178 Ga0070697_100086126
179 Ga0070697_100520581
180 Ga0070695_100074850
181 Ga0070696_100379412
182 Ga0070704_100329538
183 Ga0068859_100169551
184 Ga0068859_100248428
185 Ga0068864_100140337
186 Ga0068861_100041314
187 Ga0068862_100200822
188 Ga0068862_100277823
189 Ga0068862_100403216
190 Ga0081539_10002751
191 Ga0075427_10003741
192 Ga0075428_100028573
193 Ga0075428_100236889
194 Ga0075428_100335943
195 Ga0075428_100416440
196 Ga0075430_100068024
197 Ga0075430_100227065
198 Ga0075431_100237365
199 Ga0075431_100237859
200 Ga0075431_100457499
201 Ga0075433_10009679
202 Ga0075434_100170311
203 Ga0075429_100008172
204 Ga0075429_100091231
205 Ga0075429_100110787
206 Ga0075429_100163656
207 Ga0097620_100169542
208 Ga0097620_100248442
209 Ga0111539_10022795
210 Ga0114129_10033226
211 Ga0114129_10075046
212 Ga0114129_10094105
213 Ga0114129_10252712
214 Ga0114129_10323435
215 Ga0114129_10690293
216 Ga0105243_10395164
217 Ga0105243_10415547
218 Ga0157380_10208245
219 Ga0207684_10360395
220 Ga0207712_10085326
221 Ga0207675_100063201
222 Ga0268265_10223350
223 Ga0265323_10013740
224 Ga0265340_10009081
225 Ga0316575_10012560
226 Ga0316575_10013706
227 Ga0316579_10003636
228 Ga0316576_10108978
229 Ga0316576_10259473
230 Ga0316578_10039602
231 Ga0316578_10060998
232 Ga0307405_10544178
233 Ga0316577_10021249
234 Ga0307413_10068342
235 Ga0307410_10053616
236 Ga0316583_10033522
237 Ga0316585_10040119
238 Ga0316593_10105259
239 Ga0316596_1026210
240 Ga0316574_0077381
241 Ga0316582_0034242
242 Ga0316582_0218163
243 Ga0316582_0418565
244 Ga0316584_0028316
245 Ga0316584_0047963
246 Ga0316584_0088411
247 Ga0316584_0129123
248 Ga0316581_0024915
249 Ga0451577_0004622
250 Ga0451577_0014816
251 Ga0451577_0021298
252 Ga0451577_0079296
253 Ga0451577_0085052
254 Ga0451577_0085161
255 Ga0451577_0298256
256 Ga0451577_0564078
257 Ga0453683_0000200
258 Ga0453683_0021649
259 Ga0453683_0059346
260 Ga0453683_0148777
261 Ga0453683_0230279
262 Ga0453684_0000007
263 Ga0453684_0000271
264 Ga0453684_0000435
265 Ga0453684_0000564
266 Ga0453684_0001473
267 Ga0453684_0002905
268 Ga0453684_0003806
269 Ga0453684_0054948
270 Ga0453684_0068170
271 Ga0453684_0069211
272 Ga0453684_0073654
273 Ga0453684_0081400
274 Ga0453684_0206594
275 Ga0453684_0291792
276 Ga0453684_0307690
277 Ga0453684_0361683
278 Ga0453684_0369143
279 Ga0453684_0452765
280 Ga0453684_0719396
281 Ga0451576_0000164
282 Ga0451576_0000976
283 Ga0451576_0015589
284 Ga0451576_0047657
285 Ga0451576_0061799
286 Ga0451576_0259261
287 Ga0451576_0464377
288 Ga0451576_0688677
289 Ga0451576_0770661
290 Ga0451576_1163734
291 Ga0501298_006152
292 Ga0501071_0254702
293 Ga0501075_0061603
294 Ga0501075_0144988
295 Ga0501075_0233534
296 Ga0501077_0226948
297 nmdc:mga05p37_16928_c1
298 nmdc:mga05p37_215538_c1
299 nmdc:mga05p37_234779_c1
300 nmdc:mga05p37_48197_c1
301 nmdc:mga05p37_748326_c1
302 nmdc:mga09592_101548_c1
303 nmdc:mga09592_300871_c1
304 nmdc:mga0qj67_345352_c1
305 nmdc:mga06r32_510316_c1
306 nmdc:mga06r32_558329_c1
307 nmdc:mga0a205_119968_c1
308 nmdc:mga0a205_554151_c1
309 Ga0501084_0041183
310 Ga0530510_0042776

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02585

PIG-L

GlcNAc-PI de-N-acetylase

31

173

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
8bgo-assembly1.cif.gz_C n,n-diacetylchitobiose deacetylase from pyrococcus chitonophagus with substrate n,n-diacetylchitobiose 0.808 2 262
4xm0-assembly1.cif.gz_C n,n'-diacetylchitobiose deacetylase (semet derivative) from pyrococcus furiosus in the absence of cadmium 0.7986 2 262
1q7t-assembly2.cif.gz_B rv1170 (mshb) from mycobacterium tuberculosis 0.761 1 263
2ixd-assembly1.cif.gz_A crystal structure of the putative deacetylase bc1534 from bacillus cereus 0.7582 1 267
3we7-assembly1.cif.gz_A crystal structure of diacetylchitobiose deacetylase from pyrococcus horikoshii 0.7553 1 269
ID Description Score Start End Superfamily
af_P71311_1_185_3.40.50.10320 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;LmbE-like 0.8155 3 150 3.40.50.10320
3we7B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;LmbE-like 0.7879 3 262 3.40.50.10320
af_Q2G0L0_1_219_3.40.50.10320 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;LmbE-like 0.7782 3 262 3.40.50.10320
af_P9WJN1_3_287_3.40.50.10320 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;LmbE-like 0.7758 3 275 3.40.50.10320
af_L0T643_2_220_3.40.50.10320 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;LmbE-like 0.7756 1 263 3.40.50.10320
ID Description Score Start End GO Terms
AF-A0A3N5UDK3-F1-model_v4 GlcNAc-PI de-N-acetylase 0.9871 87 280
AF-A0A2M7CNG0-F1-model_v4 GlcNAc-PI de-N-acetylase 0.983 9 85
AF-A0A3N5UDK3-F1-model_v4 GlcNAc-PI de-N-acetylase 0.9771 87 280
AF-A0A350FZ85-F1-model_v4 GlcNAc-PI de-N-acetylase 0.977 54 279 GO:0016811
AF-A0A2M8NC87-F1-model_v4 GlcNAc-PI de-N-acetylase 0.9754 3 156 GO:0016811

Map