F226735

General Info

Members Datasets Scaffolds Average Seq Length
157 116 314 388

Family's Representative Sequence

Representative Sequence 3300005471|Ga0070698_100052099|Ga0070698_1000520991
Length 436
Sequence VRIFKFSPPEGVLKNGDKRHCANSSNASPARTAISHGRMLPMNDARDLPRKFSFRFGGDAAVYRAPGRVNLIGEHTDYNDGFVLPVAIGFSCWIALAPRKDRKIALYSENFDESIEADLDNAKIHSTGKWPDYPLGVAWALERAGYRLGGVNVYIRGEVPLGAGLSSSAALEVSTGYSLLDLARYPIDLTKLALLCQQAENEFVGARVGIMDQFVSCHGQAGSALLLDCRSLDFRLLPLPRGVQLVICNTMVQHKIGTSEYNVRRTECEEGVRLLRERLPGIRALRDVSLADLELHRGLLNETVYRRCRHVITENSRTRDAASALQDGRIAALRSLMGESHASLRDDYEVSCPELDVMVDLALQQEGVIGARMTGGGFGGCTINLVNTADSEKFRERVSKGYEAATGYYPNIYVCEASQGAEKVAPHALETSRLTD

Samples

Sample ID Description Type Environment
1 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
2 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
28 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
33 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
34 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
35 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
36 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
37 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
38 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
39 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
40 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
41 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
42 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
59 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
60 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
61 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
62 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
63 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
64 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
65 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
66 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
67 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
68 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
69 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
70 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
71 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
72 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
73 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
74 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
75 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
76 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
77 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
78 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
79 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
80 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
81 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
82 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
83 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
84 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
85 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
86 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
87 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
88 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
89 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
90 3300042130 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 Metagenome Rhizosphere
91 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
92 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
93 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
94 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
95 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
96 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
97 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
98 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
99 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
100 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
101 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
102 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
103 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
104 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
105 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
106 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
109 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
110 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
111 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
112 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
113 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
114 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
115 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
116 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.64
Nodule 0
Rhizoplane 7.64
Rhizosphere 87.26
Stem 0
Stem Tuber 0
Unclassified 1.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070698_100052099 3300005471 Bacteria 4166
2 JGI24746J21847_1000210 3300001977 Bacteria 7864
3 rootH2_10223075 3300003320 Bacteria 3604
4 rootH1_10057321 3300003323 Bacteria 5559
5 Ga0070658_10012235 3300005327 Bacteria 6889
6 Ga0070683_100017510 3300005329 Bacteria 6333
7 Ga0070661_100018865 3300005344 Bacteria 4911
8 Ga0070709_10000157 3300005434 Bacteria 44202
9 Ga0070709_10001995 3300005434 Bacteria 11109
10 Ga0070714_100018756 3300005435 Bacteria 5627
11 Ga0070713_100007513 3300005436 Bacteria 7658
12 Ga0070713_100009335 3300005436 Bacteria 7015
13 Ga0070713_100177855 3300005436 Unclassified 1910
14 Ga0070705_100006395 3300005440 Bacteria 5775
15 Ga0070708_100001747 3300005445 Bacteria 16670
16 Ga0070708_100004009 3300005445 Bacteria 11567
17 Ga0070681_10089905 3300005458 Bacteria 3022
18 Ga0068867_100000416 3300005459 Bacteria 28456
19 Ga0070706_100012871 3300005467 Bacteria 7743
20 Ga0070706_100041172 3300005467 Bacteria 4265
21 Ga0070706_100067492 3300005467 Bacteria 3308
22 Ga0070706_100194183 3300005467 Bacteria 1896
23 Ga0070707_100003963 3300005468 Bacteria 13941
24 Ga0070707_100006347 3300005468 Bacteria 10992
25 Ga0070699_100034629 3300005518 Bacteria 4365
26 Ga0070697_100016610 3300005536 Bacteria 5790
27 Ga0070697_100023629 3300005536 Bacteria 4889
28 Ga0070693_100003067 3300005547 Bacteria 7753
29 Ga0068855_100428198 3300005563 Bacteria 1447
30 Ga0070664_100002090 3300005564 Bacteria 15967
31 Ga0068857_100238312 3300005577 Bacteria 1665
32 Ga0068861_100123242 3300005719 Bacteria 2094
33 Ga0068861_100131968 3300005719 Bacteria 2028
34 Ga0070717_10270157 3300006028 Bacteria 1506
35 Ga0070716_100002378 3300006173 Bacteria 8663
36 Ga0070712_100089142 3300006175 Bacteria 2255
37 Ga0075436_100048283 3300006914 Bacteria 2937
38 Ga0075435_100060575 3300007076 Bacteria 3069
39 Ga0114129_10060547 3300009147 Bacteria 5293
40 Ga0114129_10093919 3300009147 Bacteria 4154
41 Ga0105243_10000129 3300009148 Bacteria 85721
42 Ga0105243_10020350 3300009148 Bacteria 5033
43 Ga0105249_10155728 3300009553 Bacteria 2203
44 Ga0099796_10001365 3300010159 Bacteria 4868
45 Ga0157373_10004739 3300013100 Bacteria 10232
46 Ga0157370_10000825 3300013104 Bacteria 39199
47 Ga0157374_10031791 3300013296 Bacteria 4801
48 Ga0157378_10182283 3300013297 Bacteria 1976
49 Ga0157372_10229447 3300013307 Bacteria 2152
50 Ga0157375_10004349 3300013308 Bacteria 12300
51 Ga0163163_10080286 3300014325 Bacteria 3262
52 Ga0163163_10106499 3300014325 Bacteria 2830
53 Ga0157377_10032942 3300014745 Bacteria 2825
54 Ga0213871_10000614 3300021441 Bacteria 5065
55 Ga0207647_10003712 3300025904 Bacteria 11418
56 Ga0207699_10000002 3300025906 Bacteria 662194
57 Ga0207699_10003125 3300025906 Bacteria 7865
58 Ga0207705_10105838 3300025909 Bacteria 2074
59 Ga0207684_10028716 3300025910 Bacteria 4738
60 Ga0207684_10039245 3300025910 Bacteria 4017
61 Ga0207684_10044298 3300025910 Bacteria 3773
62 Ga0207684_10065769 3300025910 Bacteria 3078
63 Ga0207684_10207710 3300025910 Bacteria 1689
64 Ga0207646_10018031 3300025922 Bacteria 6592
65 Ga0207646_10029482 3300025922 Bacteria 4986
66 Ga0207646_10046032 3300025922 Bacteria 3915
67 Ga0207700_10005277 3300025928 Bacteria 7707
68 Ga0207700_10032181 3300025928 Bacteria 3737
69 Ga0207664_10027458 3300025929 Bacteria 4315
70 Ga0207709_10000177 3300025935 Bacteria 85726
71 Ga0207665_10004291 3300025939 Bacteria 9477
72 Ga0207665_10017978 3300025939 Bacteria 4648
73 Ga0207665_10089242 3300025939 Bacteria 2135
74 Ga0207661_10031904 3300025944 Bacteria 4075
75 Ga0207679_10001200 3300025945 Bacteria 16478
76 Ga0207708_10083430 3300026075 Bacteria 2457
77 Ga0207702_10365081 3300026078 Bacteria 1385
78 Ga0207648_10000380 3300026089 Bacteria 48986
79 Ga0207674_10257640 3300026116 Bacteria 1691
80 Ga0207675_100019639 3300026118 Bacteria 6307
81 Ga0265323_10000163 3300028653 Bacteria 39972
82 Ga0265332_10014318 3300031238 Bacteria 3508
83 Ga0265339_10000105 3300031249 Bacteria 68586
84 Ga0265331_10005139 3300031250 Bacteria 7972
85 Ga0265327_10000369 3300031251 Bacteria 85139
86 Ga0265316_10005093 3300031344 Bacteria 12880
87 Ga0265316_10079595 3300031344 Bacteria 2514
88 Ga0307408_100000021 3300031548 Bacteria 312158
89 Ga0307408_100001683 3300031548 Bacteria 16240
90 Ga0307408_100011462 3300031548 Bacteria 5858
91 Ga0316579_10001116 3300031691 Bacteria 9537
92 Ga0316579_10018862 3300031691 Bacteria 3041
93 Ga0265314_10000002 3300031711 Bacteria 2092193
94 Ga0316576_10016618 3300031727 Unclassified 4977
95 Ga0307405_10032032 3300031731 Bacteria 3102
96 Ga0307413_10008826 3300031824 Bacteria 4786
97 Ga0307413_10014075 3300031824 Bacteria 4047
98 Ga0307410_10014957 3300031852 Bacteria 4586
99 Ga0307406_10000839 3300031901 Bacteria 17261
100 Ga0307406_10005321 3300031901 Bacteria 7041
101 Ga0307407_10000902 3300031903 Bacteria 10025
102 Ga0307407_10004786 3300031903 Bacteria 5795
103 Ga0307407_10180381 3300031903 Bacteria 1399
104 Ga0307412_10000013 3300031911 Bacteria 365239
105 Ga0307412_10039973 3300031911 Bacteria 3032
106 Ga0307409_100012509 3300031995 Bacteria 5411
107 Ga0307416_100034450 3300032002 Bacteria 3853
108 Ga0307414_10000018 3300032004 Bacteria 237060
109 Ga0307414_10002783 3300032004 Bacteria 9214
110 Ga0307414_10012438 3300032004 Bacteria 5031
111 Ga0307411_10009102 3300032005 Bacteria 5197
112 Ga0307411_10019671 3300032005 Bacteria 3906
113 Ga0316585_10052108 3300032137 Bacteria 1315
114 Ga0373926_0000312 3300035083 Bacteria 12026
115 Ga0373946_0026591 3300035171 Bacteria 2284
116 Ga0373927_0072947 3300035695 Bacteria 2222
117 Ga0373947_0096883 3300035725 Bacteria 1848
118 Ga0316584_0052342 3300036712 Bacteria 3053
119 Ga0436364_0810297 3300037853 Bacteria 8113
120 Ga0436363_0367147 3300039450 Bacteria 7264
121 Ga0436362_0900539 3300039453 Bacteria 1752
122 Ga0439453_0000792 3300041408 Bacteria 3709
123 Ga0451853_1596503 3300041512 Bacteria 1608
124 Ga0450890_000855 3300042127 Bacteria 4388
125 Ga0450892_000260 3300042130 Bacteria 6316
126 Ga0450893_0000062 3300042532 Bacteria 11399
127 Ga0450893_0002304 3300042532 Bacteria 2968
128 Ga0453683_0046918 3300044673 Bacteria 2708
129 Ga0495630_0009715 3300046517 Bacteria 6921
130 Ga0496101_0038723 3300048904 Bacteria 3387
131 Ga0496101_0060522 3300048904 Bacteria 2748
132 Ga0496102_0087214 3300048905 Bacteria 2883
133 Ga0496104_0022253 3300048907 Bacteria 5822
134 Ga0496105_0028709 3300048908 Bacteria 4551
135 Ga0496108_0023758 3300048911 Bacteria 5045
136 Ga0496109_0083639 3300048912 Bacteria 2943
137 Ga0496110_0019283 3300048913 Bacteria 5735
138 Ga0496110_0044869 3300048913 Bacteria 3861
139 Ga0496112_0060694 3300048915 Bacteria 3726
140 Ga0496113_0071352 3300048916 Bacteria 2641
141 Ga0496115_0035904 3300048918 Bacteria 3924
142 Ga0496121_0032018 3300048924 Bacteria 4789
143 Ga0496126_0001511 3300048929 Bacteria 35914
144 Ga0501032_0004215 3300049569 Bacteria 10885
145 Ga0501034_0005060 3300049571 Bacteria 14484
146 Ga0501034_0017451 3300049571 Bacteria 7360
147 Ga0501227_000051 3300049665 Bacteria 17479
148 Ga0501257_030280 3300049686 Bacteria 1303
149 Ga0501079_0118652 3300049741 Bacteria 2057
150 nmdc:mga03n38_6681_c1 3300050490 Bacteria 3704
151 nmdc:mga05p37_616044_c1 3300050507 Bacteria 1222
152 nmdc:mga0rr50_54040_c1 3300050513 Bacteria 2990
153 nmdc:mga08x19_36552_c1 3300050514 Bacteria 3111
154 nmdc:mga08x19_41872_c1 3300050514 Bacteria 2918
155 Ga0501084_0215241 3300054114 Bacteria 1621
156 Ga0501082_0019648 3300060353 Bacteria 5825
157 Ga0501082_0020589 3300060353 Bacteria 5686
158 Ga0070698_100052099
159 JGI24746J21847_1000210
160 rootH2_10223075
161 rootH1_10057321
162 Ga0070658_10012235
163 Ga0070683_100017510
164 Ga0070661_100018865
165 Ga0070709_10000157
166 Ga0070709_10001995
167 Ga0070714_100018756
168 Ga0070713_100007513
169 Ga0070713_100009335
170 Ga0070713_100177855
171 Ga0070705_100006395
172 Ga0070708_100001747
173 Ga0070708_100004009
174 Ga0070681_10089905
175 Ga0068867_100000416
176 Ga0070706_100012871
177 Ga0070706_100041172
178 Ga0070706_100067492
179 Ga0070706_100194183
180 Ga0070707_100003963
181 Ga0070707_100006347
182 Ga0070699_100034629
183 Ga0070697_100016610
184 Ga0070697_100023629
185 Ga0070693_100003067
186 Ga0068855_100428198
187 Ga0070664_100002090
188 Ga0068857_100238312
189 Ga0068861_100123242
190 Ga0068861_100131968
191 Ga0070717_10270157
192 Ga0070716_100002378
193 Ga0070712_100089142
194 Ga0075436_100048283
195 Ga0075435_100060575
196 Ga0114129_10060547
197 Ga0114129_10093919
198 Ga0105243_10000129
199 Ga0105243_10020350
200 Ga0105249_10155728
201 Ga0099796_10001365
202 Ga0157373_10004739
203 Ga0157370_10000825
204 Ga0157374_10031791
205 Ga0157378_10182283
206 Ga0157372_10229447
207 Ga0157375_10004349
208 Ga0163163_10080286
209 Ga0163163_10106499
210 Ga0157377_10032942
211 Ga0213871_10000614
212 Ga0207647_10003712
213 Ga0207699_10000002
214 Ga0207699_10003125
215 Ga0207705_10105838
216 Ga0207684_10028716
217 Ga0207684_10039245
218 Ga0207684_10044298
219 Ga0207684_10065769
220 Ga0207684_10207710
221 Ga0207646_10018031
222 Ga0207646_10029482
223 Ga0207646_10046032
224 Ga0207700_10005277
225 Ga0207700_10032181
226 Ga0207664_10027458
227 Ga0207709_10000177
228 Ga0207665_10004291
229 Ga0207665_10017978
230 Ga0207665_10089242
231 Ga0207661_10031904
232 Ga0207679_10001200
233 Ga0207708_10083430
234 Ga0207702_10365081
235 Ga0207648_10000380
236 Ga0207674_10257640
237 Ga0207675_100019639
238 Ga0265323_10000163
239 Ga0265332_10014318
240 Ga0265339_10000105
241 Ga0265331_10005139
242 Ga0265327_10000369
243 Ga0265316_10005093
244 Ga0265316_10079595
245 Ga0307408_100000021
246 Ga0307408_100001683
247 Ga0307408_100011462
248 Ga0316579_10001116
249 Ga0316579_10018862
250 Ga0265314_10000002
251 Ga0316576_10016618
252 Ga0307405_10032032
253 Ga0307413_10008826
254 Ga0307413_10014075
255 Ga0307410_10014957
256 Ga0307406_10000839
257 Ga0307406_10005321
258 Ga0307407_10000902
259 Ga0307407_10004786
260 Ga0307407_10180381
261 Ga0307412_10000013
262 Ga0307412_10039973
263 Ga0307409_100012509
264 Ga0307416_100034450
265 Ga0307414_10000018
266 Ga0307414_10002783
267 Ga0307414_10012438
268 Ga0307411_10009102
269 Ga0307411_10019671
270 Ga0316585_10052108
271 Ga0373926_0000312
272 Ga0373946_0026591
273 Ga0373927_0072947
274 Ga0373947_0096883
275 Ga0316584_0052342
276 Ga0436364_0810297
277 Ga0436363_0367147
278 Ga0436362_0900539
279 Ga0439453_0000792
280 Ga0451853_1596503
281 Ga0450890_000855
282 Ga0450892_000260
283 Ga0450893_0000062
284 Ga0450893_0002304
285 Ga0453683_0046918
286 Ga0495630_0009715
287 Ga0496101_0038723
288 Ga0496101_0060522
289 Ga0496102_0087214
290 Ga0496104_0022253
291 Ga0496105_0028709
292 Ga0496108_0023758
293 Ga0496109_0083639
294 Ga0496110_0019283
295 Ga0496110_0044869
296 Ga0496112_0060694
297 Ga0496113_0071352
298 Ga0496115_0035904
299 Ga0496121_0032018
300 Ga0496126_0001511
301 Ga0501032_0004215
302 Ga0501034_0005060
303 Ga0501034_0017451
304 Ga0501227_000051
305 Ga0501257_030280
306 Ga0501079_0118652
307 nmdc:mga03n38_6681_c1
308 nmdc:mga05p37_616044_c1
309 nmdc:mga0rr50_54040_c1
310 nmdc:mga08x19_36552_c1
311 nmdc:mga08x19_41872_c1
312 Ga0501084_0215241
313 Ga0501082_0019648
314 Ga0501082_0020589

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10509

GalKase_gal_bdg

Galactokinase galactose-binding signature

50

98

0.95

PF00288

GHMP_kinases_N

GHMP kinases N terminal domain

132

220

0.94

PF08544

GHMP_kinases_C

GHMP kinases C terminal

321

404

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1s4e-assembly9.cif.gz_I pyrococcus furiosus galactokinase in complex with galactose, adp and magnesium 0.9543 30 388
6zgy-assembly4.cif.gz_D structure of human galactokinase 1 bound with 2-(4-chlorophenyl)-n-(pyrimidin-2-yl)acetamide 0.9539 7 393
1s4e-assembly5.cif.gz_E pyrococcus furiosus galactokinase in complex with galactose, adp and magnesium 0.9531 28 388
6q90-assembly4.cif.gz_D structure of human galactokinase 1 bound with 1-(4-methoxyphenyl)-3-(4-pyridinyl)urea 0.952 6 393
6zgy-assembly4.cif.gz_D structure of human galactokinase 1 bound with 2-(4-chlorophenyl)-n-(pyrimidin-2-yl)acetamide 0.9513 7 393
ID Description Score Start End Superfamily
1s4eE01 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9489 28 206 3.30.230.10
af_P0A6T3_2_205_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9461 11 210 3.30.230.10
6q3wA02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;GHMP kinase, C-terminal domain 0.9443 208 383 3.30.70.890
af_P9WN63_1_186_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9441 29 208 3.30.230.10
1s4eE01 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9436 28 206 3.30.230.10
ID Description Score Start End GO Terms
AF-A0A3D4CRV2-F1-model_v4 Galactokinase (EC 2.7.1.6) 0.9772 41 391 GO:0004335
GO:0005524
GO:0005829
GO:0006012
AF-A0A357XSW1-F1-model_v4 Galactokinase (EC 2.7.1.6) 0.9767 8 392 GO:0004335
GO:0005524
GO:0005829
GO:0006012
AF-A0A3D4CRV2-F1-model_v4 Galactokinase (EC 2.7.1.6) 0.9744 41 391 GO:0004335
GO:0005524
GO:0005829
GO:0006012
AF-A0A3C0EGL1-F1-model_v4 Galactokinase 0.9733 142 393 GO:0004335
GO:0005524
GO:0005829
GO:0006012
AF-A0A2M7AG02-F1-model_v4 Galactokinase (EC 2.7.1.6) (Galactose kinase) 0.9702 6 393 GO:0000287
GO:0004335
GO:0005524
GO:0005829
GO:0006012

Map