F227599

General Info

Members Datasets Scaffolds Average Seq Length
157 113 314 430

Family's Representative Sequence

Representative Sequence 3300031241|Ga0265325_10024986|Ga0265325_100249862
Length 457
Sequence VPVADRVAEHGGGGLTSAAGASGMTTIDAVLERFALLHPRKIDLSLDRVERLLADLGSPHKRLPPVVHVAGTNGKGSTVAFMRAALEAADKRVHVYTSPHLVRFNERIRLAGALVDDDRLADALARCEAVNDGRSISVFEITTAAAFVLFSEAPADYLLLEVGLGGRYDATNVIERPAATVITPVSIDHTEFLGPTIEKIAFEKAGVLRRGTPAIVAEQDERALAVIEREALKLGALRRFAGRDFFIRSEHGRLAYEDAEGLVDLPTPRLAGRHQFGNAATAVATLRAIEPAIANRALERGMLEVEWPARLQRLRGGPLVALAPPQAEVWLDGAHNEAGGRALAEAMADLEDHAPRPLALICGTLASKDTAGFLRHFKGLAQEALAVPVVGEHAARPAEEVAAIAQSVGLEAAACDSVASALRFLAARDWPTPPRILIAGSLYLAGAVLEANDDAPR

Samples

Sample ID Description Type Environment
1 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
23 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
26 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
27 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
28 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
29 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
35 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
38 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
39 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
40 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
41 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
42 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
43 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
44 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
45 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
68 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
69 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
70 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
71 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
72 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
73 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
74 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
75 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
76 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
77 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
78 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
79 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
80 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
81 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
82 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
83 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
84 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
85 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
86 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
87 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
88 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
89 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
95 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
96 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
97 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
99 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
100 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
101 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
102 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
103 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
104 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
105 2643221591 Devosia sp. Root685 Isolate Unclassified
106 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
107 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
108 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
109 2894817345 Aureimonas psammosilenae YIM DR1026 Isolate Unclassified
110 2896429255 Sphingomonas rhizophila KACC 19189 Isolate Rhizosphere
111 2916178963 Pseudoalteromonas rhizosphaerae RA15 Isolate Rhizosphere
112 2917554339 Chthonobacter rhizosphaerae yh7-1 Isolate Rhizosphere
113 2932401849 Devosia sp. 2618 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.63
Metatranscriptomes 0
Isolates 6.37

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.64
Nodule 0
Rhizoplane 0
Rhizosphere 80.89
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265325_10024986 3300031241 Bacteria 3245
2 JGI25151J46595_10005213 3300003187 Bacteria 6740
3 JGI25406J46586_10000015 3300003203 Bacteria 91406
4 rootH2_10162161 3300003320 Bacteria 2617
5 Ga0070658_10034570 3300005327 Bacteria 4066
6 Ga0070660_100024139 3300005339 Bacteria 4510
7 Ga0070661_100000609 3300005344 Bacteria 26651
8 Ga0070661_100008393 3300005344 Bacteria 7137
9 Ga0070659_100065673 3300005366 Bacteria 2874
10 Ga0070667_100102166 3300005367 Bacteria 2477
11 Ga0070709_10013769 3300005434 Bacteria 4556
12 Ga0070714_100006113 3300005435 Bacteria 9251
13 Ga0070714_100023194 3300005435 Bacteria 5094
14 Ga0070713_100015236 3300005436 Bacteria 5735
15 Ga0070710_10000629 3300005437 Bacteria 16796
16 Ga0070710_10032522 3300005437 Bacteria 2826
17 Ga0070681_10004552 3300005458 Bacteria 13225
18 Ga0070679_100016660 3300005530 Bacteria 7098
19 Ga0070679_100080384 3300005530 Bacteria 3249
20 Ga0068853_100001154 3300005539 Bacteria 18755
21 Ga0068853_100014261 3300005539 Bacteria 6504
22 Ga0070665_100152618 3300005548 Bacteria 2312
23 Ga0068855_100030508 3300005563 Bacteria 6448
24 Ga0068855_100039201 3300005563 Bacteria 5624
25 Ga0068855_100071913 3300005563 Bacteria 4020
26 Ga0070664_100085405 3300005564 Bacteria 2726
27 Ga0068857_100034554 3300005577 Bacteria 4472
28 Ga0068857_100159692 3300005577 Bacteria 2045
29 Ga0068852_100004758 3300005616 Bacteria 9642
30 Ga0068852_100124443 3300005616 Bacteria 2365
31 Ga0068851_10000319 3300005834 Bacteria 21751
32 Ga0068851_10016985 3300005834 Bacteria 3489
33 Ga0081540_1017215 3300005983 Bacteria 4481
34 Ga0081539_10000064 3300005985 Bacteria 247020
35 Ga0075363_100054183 3300006048 Bacteria 2145
36 Ga0070715_10042806 3300006163 Bacteria 1906
37 Ga0070716_100000748 3300006173 Bacteria 13913
38 Ga0075362_10018236 3300006177 Bacteria 2901
39 Ga0075367_10002416 3300006178 Bacteria 8530
40 Ga0105240_10102284 3300009093 Bacteria 3482
41 Ga0105237_10000053 3300009545 Bacteria 158890
42 Ga0105238_10016772 3300009551 Bacteria 7426
43 Ga0105238_10063123 3300009551 Bacteria 3705
44 Ga0105239_10000587 3300010375 Bacteria 51834
45 Ga0105239_10006136 3300010375 Bacteria 13985
46 Ga0157371_10080560 3300013102 Bacteria 2306
47 Ga0157370_10032575 3300013104 Bacteria 5088
48 Ga0157369_10142147 3300013105 Bacteria 2539
49 Ga0157374_10005348 3300013296 Bacteria 10778
50 Ga0157372_10364352 3300013307 Bacteria 1684
51 Ga0213876_10020057 3300021384 Bacteria 3531
52 Ga0213875_10000031 3300021388 Bacteria 176367
53 Ga0209233_1000389 3300025261 Bacteria 37329
54 Ga0209130_1000770 3300025284 Bacteria 27670
55 Ga0209025_1009425 3300025294 Bacteria 6804
56 Ga0207426_1000085 3300025302 Bacteria 293171
57 Ga0207656_10006543 3300025321 Bacteria 4197
58 Ga0207692_10000489 3300025898 Bacteria 13992
59 Ga0207699_10003638 3300025906 Bacteria 7367
60 Ga0207671_10000555 3300025914 Bacteria 50279
61 Ga0207693_10036863 3300025915 Bacteria 3856
62 Ga0207693_10089654 3300025915 Bacteria 2410
63 Ga0207660_10012648 3300025917 Bacteria 5527
64 Ga0207657_10057265 3300025919 Bacteria 3359
65 Ga0207657_10102007 3300025919 Bacteria 2380
66 Ga0207649_10001025 3300025920 Bacteria 17224
67 Ga0207694_10012350 3300025924 Bacteria 6436
68 Ga0207700_10002686 3300025928 Bacteria 10251
69 Ga0207700_10077181 3300025928 Bacteria 2587
70 Ga0207664_10004352 3300025929 Bacteria 9590
71 Ga0207690_10222049 3300025932 Bacteria 1446
72 Ga0207665_10001984 3300025939 Bacteria 13791
73 Ga0207665_10118724 3300025939 Bacteria 1866
74 Ga0207679_10122492 3300025945 Bacteria 2073
75 Ga0207667_10036633 3300025949 Bacteria 5255
76 Ga0207667_10039143 3300025949 Bacteria 5055
77 Ga0207677_10084819 3300026023 Bacteria 2285
78 Ga0207639_10002789 3300026041 Bacteria 11724
79 Ga0207639_10003521 3300026041 Bacteria 10523
80 Ga0207678_10065435 3300026067 Bacteria 3121
81 Ga0207702_10037354 3300026078 Bacteria 4065
82 Ga0207674_10027762 3300026116 Bacteria 5980
83 Ga0207683_10065517 3300026121 Bacteria 3203
84 Ga0207698_10001349 3300026142 Bacteria 14292
85 Ga0207698_10131051 3300026142 Bacteria 2142
86 Ga0265334_10011014 3300028573 Bacteria 3814
87 Ga0265318_10006490 3300028577 Bacteria 5381
88 Ga0265338_10030575 3300028800 Bacteria 5301
89 Ga0265338_10052615 3300028800 Bacteria 3651
90 Ga0265330_10004619 3300031235 Bacteria 6963
91 Ga0265330_10007999 3300031235 Bacteria 5123
92 Ga0265330_10010514 3300031235 Bacteria 4358
93 Ga0265325_10004178 3300031241 Bacteria 9181
94 Ga0265340_10009311 3300031247 Bacteria 5274
95 Ga0265339_10003664 3300031249 Bacteria 10719
96 Ga0265339_10005874 3300031249 Bacteria 8133
97 Ga0265339_10081758 3300031249 Bacteria 1707
98 Ga0265316_10016653 3300031344 Bacteria 6372
99 Ga0265316_10157053 3300031344 Bacteria 1702
100 Ga0265313_10000048 3300031595 Bacteria 112723
101 Ga0265314_10007660 3300031711 Bacteria 9337
102 Ga0265314_10092250 3300031711 Bacteria 1969
103 Ga0265314_10135323 3300031711 Bacteria 1531
104 Ga0265342_10027193 3300031712 Bacteria 3578
105 Ga0265342_10027480 3300031712 Bacteria 3555
106 Ga0265342_10057534 3300031712 Bacteria 2301
107 Ga0265342_10097753 3300031712 Bacteria 1676
108 Ga0373933_0000118 3300035724 Bacteria 51316
109 Ga0316584_0091557 3300036712 Bacteria 2277
110 Ga0395899_0046227 3300037312 Bacteria 3243
111 Ga0395900_0031211 3300037418 Bacteria 5472
112 Ga0395898_0077384 3300037466 Bacteria 3211
113 Ga0395898_0132897 3300037466 Bacteria 2383
114 Ga0436364_0053792 3300037853 Bacteria 3224
115 Ga0436364_0369879 3300037853 Bacteria 1711
116 Ga0436364_0517794 3300037853 Bacteria 4112
117 Ga0436364_1269633 3300037853 Bacteria 38185
118 Ga0395901_0080475 3300038443 Bacteria 3401
119 Ga0436365_0444362 3300039437 Bacteria 8846
120 Ga0436365_0511366 3300039437 Bacteria 7535
121 Ga0436365_1722431 3300039437 Bacteria 9490
122 Ga0436365_1732131 3300039437 Bacteria 2021
123 Ga0466966_0023292 3300044684 Bacteria 4056
124 Ga0466959_0011037 3300045049 Bacteria 6484
125 Ga0495606_0000676 3300046507 Bacteria 53366
126 Ga0496125_0000053 3300048928 Bacteria 279909
127 Ga0501031_0046882 3300049568 Bacteria 2818
128 Ga0501032_0118117 3300049569 Bacteria 1754
129 Ga0501032_0120734 3300049569 Bacteria 1733
130 Ga0501033_0048445 3300049570 Bacteria 3156
131 Ga0501033_0050551 3300049570 Bacteria 3083
132 Ga0501034_0072278 3300049571 Bacteria 3458
133 Ga0501034_0148214 3300049571 Bacteria 2323
134 Ga0501034_0176059 3300049571 Bacteria 2105
135 Ga0501037_0132622 3300049573 Bacteria 1786
136 Ga0501068_0040705 3300049584 Bacteria 2791
137 Ga0501070_0035607 3300049586 Bacteria 4159
138 Ga0501074_0042916 3300049590 Bacteria 3272
139 Ga0501035_0035582 3300049822 Bacteria 4518
140 Ga0501035_0055302 3300049822 Bacteria 3543
141 Ga0501044_0048640 3300049823 Bacteria 4379
142 Ga0501044_0235426 3300049823 Bacteria 1777
143 nmdc:mga03683_13656_c1 3300050489 Bacteria 2993
144 nmdc:mga03n38_50455_c1 3300050490 Bacteria 1854
145 nmdc:mga06z11_19088_c1 3300050494 Bacteria 3145
146 Ga0500636_0003370 3300053177 Bacteria 8989
147 Ga0501084_0140866 3300054114 Bacteria 2031
148 2523468761 2523231067 Bacteria 5230452
149 2643965863 2643221591 Bacteria 4397626
150 2739349743 2738543031 Bacteria 5769731
151 2821448054 2821443989 Bacteria 7658172
152 2844535474 2844533157 Bacteria 7517899
153 2894821167 2894817345 Bacteria 4892941
154 2896430897 2896429255 Bacteria 2557483
155 2916180198 2916178963 Bacteria 5265078
156 2917557995 2917554339 Bacteria 4987857
157 2932405324 2932401849 Bacteria 4262978
158 Ga0265325_10024986
159 JGI25151J46595_10005213
160 JGI25406J46586_10000015
161 rootH2_10162161
162 Ga0070658_10034570
163 Ga0070660_100024139
164 Ga0070661_100000609
165 Ga0070661_100008393
166 Ga0070659_100065673
167 Ga0070667_100102166
168 Ga0070709_10013769
169 Ga0070714_100006113
170 Ga0070714_100023194
171 Ga0070713_100015236
172 Ga0070710_10000629
173 Ga0070710_10032522
174 Ga0070681_10004552
175 Ga0070679_100016660
176 Ga0070679_100080384
177 Ga0068853_100001154
178 Ga0068853_100014261
179 Ga0070665_100152618
180 Ga0068855_100030508
181 Ga0068855_100039201
182 Ga0068855_100071913
183 Ga0070664_100085405
184 Ga0068857_100034554
185 Ga0068857_100159692
186 Ga0068852_100004758
187 Ga0068852_100124443
188 Ga0068851_10000319
189 Ga0068851_10016985
190 Ga0081540_1017215
191 Ga0081539_10000064
192 Ga0075363_100054183
193 Ga0070715_10042806
194 Ga0070716_100000748
195 Ga0075362_10018236
196 Ga0075367_10002416
197 Ga0105240_10102284
198 Ga0105237_10000053
199 Ga0105238_10016772
200 Ga0105238_10063123
201 Ga0105239_10000587
202 Ga0105239_10006136
203 Ga0157371_10080560
204 Ga0157370_10032575
205 Ga0157369_10142147
206 Ga0157374_10005348
207 Ga0157372_10364352
208 Ga0213876_10020057
209 Ga0213875_10000031
210 Ga0209233_1000389
211 Ga0209130_1000770
212 Ga0209025_1009425
213 Ga0207426_1000085
214 Ga0207656_10006543
215 Ga0207692_10000489
216 Ga0207699_10003638
217 Ga0207671_10000555
218 Ga0207693_10036863
219 Ga0207693_10089654
220 Ga0207660_10012648
221 Ga0207657_10057265
222 Ga0207657_10102007
223 Ga0207649_10001025
224 Ga0207694_10012350
225 Ga0207700_10002686
226 Ga0207700_10077181
227 Ga0207664_10004352
228 Ga0207690_10222049
229 Ga0207665_10001984
230 Ga0207665_10118724
231 Ga0207679_10122492
232 Ga0207667_10036633
233 Ga0207667_10039143
234 Ga0207677_10084819
235 Ga0207639_10002789
236 Ga0207639_10003521
237 Ga0207678_10065435
238 Ga0207702_10037354
239 Ga0207674_10027762
240 Ga0207683_10065517
241 Ga0207698_10001349
242 Ga0207698_10131051
243 Ga0265334_10011014
244 Ga0265318_10006490
245 Ga0265338_10030575
246 Ga0265338_10052615
247 Ga0265330_10004619
248 Ga0265330_10007999
249 Ga0265330_10010514
250 Ga0265325_10004178
251 Ga0265340_10009311
252 Ga0265339_10003664
253 Ga0265339_10005874
254 Ga0265339_10081758
255 Ga0265316_10016653
256 Ga0265316_10157053
257 Ga0265313_10000048
258 Ga0265314_10007660
259 Ga0265314_10092250
260 Ga0265314_10135323
261 Ga0265342_10027193
262 Ga0265342_10027480
263 Ga0265342_10057534
264 Ga0265342_10097753
265 Ga0373933_0000118
266 Ga0316584_0091557
267 Ga0395899_0046227
268 Ga0395900_0031211
269 Ga0395898_0077384
270 Ga0395898_0132897
271 Ga0436364_0053792
272 Ga0436364_0369879
273 Ga0436364_0517794
274 Ga0436364_1269633
275 Ga0395901_0080475
276 Ga0436365_0444362
277 Ga0436365_0511366
278 Ga0436365_1722431
279 Ga0436365_1732131
280 Ga0466966_0023292
281 Ga0466959_0011037
282 Ga0495606_0000676
283 Ga0496125_0000053
284 Ga0501031_0046882
285 Ga0501032_0118117
286 Ga0501032_0120734
287 Ga0501033_0048445
288 Ga0501033_0050551
289 Ga0501034_0072278
290 Ga0501034_0148214
291 Ga0501034_0176059
292 Ga0501037_0132622
293 Ga0501068_0040705
294 Ga0501070_0035607
295 Ga0501074_0042916
296 Ga0501035_0035582
297 Ga0501035_0055302
298 Ga0501044_0048640
299 Ga0501044_0235426
300 nmdc:mga03683_13656_c1
301 nmdc:mga03n38_50455_c1
302 nmdc:mga06z11_19088_c1
303 Ga0500636_0003370
304 Ga0501084_0140866
305 2523468761
306 2643965863
307 2739349743
308 2821448054
309 2844535474
310 2894821167
311 2896430897
312 2916180198
313 2917557995
314 2932405324

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08245

Mur_ligase_M

Mur ligase middle domain

69

286

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
3qcz-assembly1.cif.gz_A crystal structure of bifunctional folylpolyglutamate synthase/dihydrofolate synthase with mn, amppnp and l-glutamate bound 0.9454 9 432
1w78-assembly1.cif.gz_A e.coli folc in complex with dhpp and adp 0.9451 5 431
3n2a-assembly1.cif.gz_A crystal structure of bifunctional folylpolyglutamate synthase/dihydrofolate synthase from yersinia pestis co92 0.9393 9 432
3nrs-assembly1.cif.gz_A crystal structure of ligand-free bifunctional folylpolyglutamate synthase/dihydrofolate synthase from yersinia pestis c092 0.9385 9 432
3pyz-assembly1.cif.gz_A crystal structure of bifunctional folylpolyglutamate synthase/dihydrofolate synthase complexed with amppnp and mn ion from yersinia pestis c092 0.9346 9 432
ID Description Score Start End Superfamily
af_P08192_1_287_3.40.1190.10 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9453 5 292 3.40.1190.10
af_Q9UTD0_1_272_3.40.1190.10 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9368 22 292 3.40.1190.10
af_Q2FXR9_1_294_3.40.1190.10 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9361 9 291 3.40.1190.10
af_Q9UTD0_1_272_3.40.1190.10 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9301 22 292 3.40.1190.10
af_P08192_1_287_3.40.1190.10 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9167 5 292 3.40.1190.10
ID Description Score Start End GO Terms
AF-A0A382GKW8-F1-model_v4 Mur ligase central domain-containing protein 0.991 32 207 GO:0004326
GO:0005524
GO:0005737
GO:0008841
AF-A0A2D4UN55-F1-model_v4 Bifunctional folylpolyglutamate synthase/dihydrofolate synthase 0.9869 4 189 GO:0004326
GO:0005524
GO:0005737
GO:0008841
AF-A0A3C1IG95-F1-model_v4 Bifunctional folylpolyglutamate synthase/dihydrofolate synthase 0.9833 8 272 GO:0004326
GO:0005524
GO:0005737
GO:0008841
GO:0046654
AF-A0A159Z8P5-F1-model_v4 FolC bifunctional protein 0.9786 10 260 GO:0004326
GO:0005524
GO:0005737
GO:0008841
GO:0046654
AF-A0A401U396-F1-model_v4 Mur ligase central domain-containing protein 0.9773 44 209 GO:0004326
GO:0005524
GO:0005737
GO:0008841

Map