F228677

General Info

Members Datasets Scaffolds Average Seq Length
158 80 157 405

Family's Representative Sequence

Representative Sequence 3300003322|rootL2_10225933|rootL2_102259332
Length 482
Sequence MAPGAIVRLAVLRQRRRNKYIFGFCTGVQCVCKISAAAWGRGAFFFPAWYAGSTRSVPCFRIPCRLIWTIALRTLGRMEKITCAEANPGCAVTIFEATAHPLAKVKVSGGGRCNVTHACFEPRELVKRYPRGHRELLGAFHRWQPRDTIEWFAARGVPLKTESDGRMFPITDNSETIVHCLEEAARKAGVRVVTRVGVKSVERATFAAGQNTAPAPGFSVTLTTGEGVRCDCLLIATGGNKTNAGFDFARRFGHTIEPPVPSLFTFHVKDPRLQDLSGVSVELAATAVRGTNLKETGPLLITHWGLSGPAVLKLSAWGARLLHDCDYRFTLAVNWTPQFNADQLAIALEQARQSNPKKQLGSWCPLGLPLRLWERLIAAAGLPVTVLWANVSGASLRALAAQVGSAEFAVDGKSAFKEEFVTCGGVKLSEVDFKTMESRRVPGLYFAGEVLDIDGVTGGFNFQAAWTGGRLAGLAMAGVRES

Samples

Sample ID Description Type Environment
1 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
2 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
10 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
11 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
12 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
13 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
14 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
15 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
16 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
17 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
18 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
19 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
27 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
28 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
29 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
30 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
31 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
32 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
33 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
34 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
35 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
36 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
37 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
38 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
39 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
40 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
41 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
42 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
43 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
44 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
45 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
46 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
47 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
48 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
49 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
50 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
51 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
52 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
53 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
54 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
55 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
56 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
57 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
58 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
59 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
60 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
61 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
62 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
63 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
65 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
66 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
67 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
68 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
69 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
71 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
72 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
74 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
75 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
76 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
77 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
80 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.37
Metatranscriptomes 0
Isolates 0.63

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.63
Rhizosphere 94.94
Stem 0
Stem Tuber 0
Unclassified 4.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24033J26618_1000007 3300002155 Bacteria 37060
2 rootH2_10007403 3300003320 Bacteria 26454
3 rootL2_10225933 3300003322 Bacteria 3779
4 rootH1_10014482 3300003323 Bacteria 3947
5 rootH1_10033062 3300003323 Bacteria 39973
6 Ga0070683_100019354 3300005329 Bacteria 6046
7 Ga0068869_100000056 3300005334 Bacteria 49405
8 Ga0070661_100003699 3300005344 Bacteria 10543
9 Ga0068867_100002543 3300005459 Bacteria 12845
10 Ga0068857_100023607 3300005577 Bacteria 5415
11 Ga0068856_100001889 3300005614 Bacteria 21823
12 Ga0068859_100306568 3300005617 Bacteria 1681
13 Ga0070717_10000130 3300006028 Bacteria 55378
14 Ga0097621_100001090 3300006237 Bacteria 19003
15 Ga0097621_100087467 3300006237 Bacteria 2602
16 Ga0097620_100306563 3300006931 Bacteria 1681
17 Ga0157374_10000046 3300013296 Bacteria 140823
18 Ga0157375_10383682 3300013308 Bacteria 1572
19 Ga0157376_10000218 3300014969 Bacteria 39706
20 Ga0207688_10008448 3300025901 Bacteria 5601
21 Ga0207649_10000239 3300025920 Bacteria 44755
22 Ga0207689_10000102 3300025942 Bacteria 69286
23 Ga0207661_10015683 3300025944 Bacteria 5582
24 Ga0207702_10001683 3300026078 Bacteria 21832
25 Ga0207648_10002511 3300026089 Bacteria 19695
26 Ga0207674_10058630 3300026116 Bacteria 3899
27 Ga0265337_1006657 3300028556 Bacteria 4419
28 Ga0265326_10017630 3300028558 Bacteria 2058
29 Ga0265319_1000961 3300028563 Bacteria 18094
30 Ga0265319_1001169 3300028563 Bacteria 16234
31 Ga0265319_1001493 3300028563 Bacteria 13940
32 Ga0265319_1003195 3300028563 Bacteria 8619
33 Ga0265319_1004678 3300028563 Bacteria 6712
34 Ga0265319_1012954 3300028563 Bacteria 3343
35 Ga0265319_1016524 3300028563 Unclassified 2828
36 Ga0265334_10003350 3300028573 Bacteria 7313
37 Ga0265318_10000038 3300028577 Bacteria 136367
38 Ga0265318_10001504 3300028577 Bacteria 13594
39 Ga0265318_10004325 3300028577 Bacteria 6901
40 Ga0265318_10004628 3300028577 Bacteria 6624
41 Ga0265318_10013935 3300028577 Bacteria 3384
42 Ga0265323_10001782 3300028653 Bacteria 10218
43 Ga0265323_10020815 3300028653 Bacteria 2520
44 Ga0265336_10002112 3300028666 Bacteria 8427
45 Ga0265338_10008792 3300028800 Bacteria 12194
46 Ga0265324_10000385 3300029957 Bacteria 31968
47 Ga0265324_10005784 3300029957 Bacteria 5263
48 Ga0265330_10002370 3300031235 Bacteria 10329
49 Ga0265330_10037280 3300031235 Bacteria 2165
50 Ga0265320_10000113 3300031240 Bacteria 70098
51 Ga0265320_10000831 3300031240 Bacteria 23295
52 Ga0265320_10001815 3300031240 Bacteria 15141
53 Ga0265320_10001948 3300031240 Bacteria 14570
54 Ga0265320_10005073 3300031240 Bacteria 8511
55 Ga0265320_10013127 3300031240 Bacteria 4777
56 Ga0265320_10021445 3300031240 Bacteria 3474
57 Ga0265320_10034508 3300031240 Bacteria 2572
58 Ga0265331_10002824 3300031250 Bacteria 11514
59 Ga0265331_10054924 3300031250 Bacteria 1896
60 Ga0265327_10000029 3300031251 Bacteria 352607
61 Ga0265327_10001172 3300031251 Bacteria 35590
62 Ga0265327_10002034 3300031251 Bacteria 22759
63 Ga0265327_10003757 3300031251 Bacteria 14111
64 Ga0265327_10006476 3300031251 Bacteria 9348
65 Ga0265316_10004859 3300031344 Bacteria 13248
66 Ga0265316_10007494 3300031344 Bacteria 10274
67 Ga0265316_10020050 3300031344 Bacteria 5702
68 Ga0265316_10021913 3300031344 Bacteria 5401
69 Ga0265316_10024309 3300031344 Bacteria 5081
70 Ga0265316_10091136 3300031344 Bacteria 2326
71 Ga0307408_100000011 3300031548 Bacteria 414737
72 Ga0265313_10002866 3300031595 Bacteria 14475
73 Ga0265313_10003576 3300031595 Bacteria 12499
74 Ga0265313_10003948 3300031595 Bacteria 11667
75 Ga0307508_10000014 3300031616 Bacteria 226567
76 Ga0265314_10002265 3300031711 Bacteria 19923
77 Ga0265314_10002467 3300031711 Bacteria 18917
78 Ga0265314_10003700 3300031711 Bacteria 14659
79 Ga0265314_10007380 3300031711 Bacteria 9541
80 Ga0265314_10054043 3300031711 Bacteria 2781
81 Ga0265314_10100524 3300031711 Unclassified 1860
82 Ga0265342_10006311 3300031712 Bacteria 8840
83 Ga0265342_10072738 3300031712 Bacteria 2001
84 Ga0307410_10000051 3300031852 Bacteria 41682
85 Ga0307409_100000096 3300031995 Bacteria 32336
86 Ga0307416_100000123 3300032002 Bacteria 46664
87 Ga0395899_0000020 3300037312 Bacteria 404354
88 Ga0395898_0000005 3300037466 Bacteria 621247
89 Ga0451577_0000023 3300042876 Bacteria 419051
90 Ga0451577_0043196 3300042876 Bacteria 4038
91 Ga0451577_0111108 3300042876 Bacteria 2452
92 Ga0451577_0358311 3300042876 Bacteria 1323
93 Ga0453683_0000626 3300044673 Bacteria 38554
94 Ga0453684_0000484 3300044712 Bacteria 157641
95 Ga0453684_0001401 3300044712 Bacteria 69706
96 Ga0453684_0005812 3300044712 Bacteria 24031
97 Ga0453684_0045181 3300044712 Bacteria 5880
98 Ga0453684_0070606 3300044712 Bacteria 4422
99 Ga0453684_0077446 3300044712 Bacteria 4167
100 Ga0453684_0426891 3300044712 Bacteria 1479
101 Ga0466971_0000015 3300044719 Bacteria 86143
102 Ga0466957_0016517 3300044842 Bacteria 4317
103 Ga0451576_0001488 3300045051 Bacteria 39603
104 Ga0451576_0072718 3300045051 Unclassified 3578
105 Ga0495613_0145851 3300046689 Bacteria 1689
106 Ga0495675_0057275 3300047444 Unclassified 2471
107 Ga0496107_0034374 3300048910 Bacteria 3631
108 Ga0496126_0189033 3300048929 Bacteria 1745
109 Ga0501031_0000593 3300049568 Bacteria 21313
110 Ga0501031_0047859 3300049568 Bacteria 2787
111 Ga0501032_0000139 3300049569 Bacteria 59150
112 Ga0501032_0000815 3300049569 Bacteria 25305
113 Ga0501032_0000985 3300049569 Bacteria 22977
114 Ga0501032_0028711 3300049569 Bacteria 3821
115 Ga0501032_0032427 3300049569 Bacteria 3580
116 Ga0501033_0000009 3300049570 Bacteria 272351
117 Ga0501033_0000033 3300049570 Bacteria 154380
118 Ga0501033_0009884 3300049570 Bacteria 7322
119 Ga0501034_0053885 3300049571 Bacteria 4049
120 Ga0501034_0190272 3300049571 Unclassified 2015
121 Ga0501036_0017685 3300049572 Bacteria 5966
122 Ga0501036_0032730 3300049572 Bacteria 4395
123 Ga0501036_0059807 3300049572 Bacteria 3228
124 Ga0501037_0000245 3300049573 Bacteria 46319
125 Ga0501037_0017796 3300049573 Bacteria 5231
126 Ga0501038_0000417 3300049574 Bacteria 36952
127 Ga0501038_0000555 3300049574 Bacteria 32977
128 Ga0501038_0001361 3300049574 Bacteria 22297
129 Ga0501039_0035662 3300049575 Bacteria 3839
130 Ga0501039_0120193 3300049575 Bacteria 2058
131 Ga0501039_0246455 3300049575 Bacteria 1405
132 Ga0501042_0055159 3300049578 Bacteria 2835
133 Ga0501043_0000186 3300049579 Bacteria 56186
134 Ga0501043_0001321 3300049579 Bacteria 21690
135 Ga0501043_0014527 3300049579 Bacteria 6165
136 Ga0501043_0031073 3300049579 Bacteria 4199
137 Ga0501046_0012429 3300049580 Bacteria 7248
138 Ga0501046_0021037 3300049580 Bacteria 5387
139 Ga0501046_0025575 3300049580 Bacteria 4831
140 Ga0501047_0003918 3300049581 Bacteria 13995
141 Ga0501047_0006653 3300049581 Bacteria 10864
142 Ga0501047_0107578 3300049581 Bacteria 2670
143 Ga0501048_0030449 3300049582 Bacteria 3904
144 Ga0501048_0060550 3300049582 Bacteria 2683
145 Ga0501070_0002340 3300049586 Bacteria 16637
146 Ga0501070_0064167 3300049586 Bacteria 3042
147 Ga0501071_0048373 3300049587 Bacteria 3058
148 Ga0501080_0196092 3300049742 Bacteria 1855
149 Ga0501083_0028047 3300049744 Bacteria 3882
150 Ga0501035_0000018 3300049822 Bacteria 241543
151 Ga0501035_0000460 3300049822 Bacteria 45701
152 Ga0501044_0000042 3300049823 Bacteria 152693
153 Ga0501044_0000283 3300049823 Bacteria 64619
154 Ga0501044_0002683 3300049823 Bacteria 20239
155 Ga0501044_0005233 3300049823 Bacteria 14429
156 Ga0501045_0007615 3300049824 Bacteria 7527
157 Ga0466962_0000008 3300061719 Bacteria 157750

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049571 Ga0501034_0190272 Ga0501034_0190272_98_1339 348
2 3300031251 Ga0265327_10003757 Ga0265327_1000375711 367
3 3300005329 Ga0070683_100019354 Ga0070683_1000193545 369
4 3300025944 Ga0207661_10015683 Ga0207661_100156835 369
5 3300042876 Ga0451577_0043196 Ga0451577_0043196_1783_3024 369
6 3300044712 Ga0453684_0077446 Ga0453684_0077446_1099_2340 369
7 3300044712 Ga0453684_0005812 Ga0453684_0005812_5517_6767 371
8 3300044712 Ga0453684_0045181 Ga0453684_0045181_2502_3752 371
9 3300042876 Ga0451577_0000023 Ga0451577_0000023_271730_272971 372
10 3300044719 Ga0466971_0000015 Ga0466971_0000015_74886_76094 373
11 3300048929 Ga0496126_0189033 Ga0496126_0189033_500_1717 373
12 3300049570 Ga0501033_0000033 Ga0501033_0000033_76164_77390 373
13 3300049574 Ga0501038_0001361 Ga0501038_0001361_4849_6075 373
14 3300061719 Ga0466962_0000008 Ga0466962_0000008_122409_123617 373
15 3300044712 Ga0453684_0000484 Ga0453684_0000484_124169_125512 374
16 3300044712 Ga0453684_0001401 Ga0453684_0001401_36302_37693 374
17 3300028563 Ga0265319_1000961 Ga0265319_10009616 375
18 3300028563 Ga0265319_1016524 Ga0265319_10165242 375
19 3300028577 Ga0265318_10001504 Ga0265318_1000150411 375
20 3300028653 Ga0265323_10020815 Ga0265323_100208151 375
21 3300031240 Ga0265320_10034508 Ga0265320_100345082 375
22 3300031344 Ga0265316_10007494 Ga0265316_100074943 375
23 3300031595 Ga0265313_10002866 Ga0265313_1000286615 375
24 3300031711 Ga0265314_10002265 Ga0265314_100022654 375
25 3300031711 Ga0265314_10003700 Ga0265314_100037003 375
26 3300031712 Ga0265342_10006311 Ga0265342_1000631112 375
27 3300031712 Ga0265342_10072738 Ga0265342_100727382 375
28 3300003323 rootH1_10033062 rootH1_1003306224 376
29 3300005614 Ga0068856_100001889 Ga0068856_10000188914 376
30 3300006237 Ga0097621_100087467 Ga0097621_1000874673 376
31 3300013296 Ga0157374_10000046 Ga0157374_1000004626 376
32 3300014969 Ga0157376_10000218 Ga0157376_1000021812 376
33 3300025901 Ga0207688_10008448 Ga0207688_100084486 376
34 3300026078 Ga0207702_10001683 Ga0207702_1000168314 376
35 3300028563 Ga0265319_1001493 Ga0265319_10014932 376
36 3300031240 Ga0265320_10001948 Ga0265320_100019482 376
37 3300031711 Ga0265314_10054043 Ga0265314_100540432 376
38 3300031711 Ga0265314_10100524 Ga0265314_101005242 376
39 3300037312 Ga0395899_0000020 Ga0395899_0000020_91841_93070 376
40 3300037466 Ga0395898_0000005 Ga0395898_0000005_103732_104961 376
41 3300045051 Ga0451576_0001488 Ga0451576_0001488_34196_35473 376
42 3300045051 Ga0451576_0072718 Ga0451576_0072718_141_1394 376
43 3300049568 Ga0501031_0000593 Ga0501031_0000593_11646_12869 376
44 3300049569 Ga0501032_0000985 Ga0501032_0000985_13334_14638 376
45 3300049569 Ga0501032_0028711 Ga0501032_0028711_562_1788 376
46 3300049572 Ga0501036_0017685 Ga0501036_0017685_3661_4884 376
47 3300049572 Ga0501036_0032730 Ga0501036_0032730_157_1461 376
48 3300049573 Ga0501037_0000245 Ga0501037_0000245_1409_2623 376
49 3300049575 Ga0501039_0035662 Ga0501039_0035662_93_1316 376
50 3300049575 Ga0501039_0246455 Ga0501039_0246455_132_1352 376
51 3300049579 Ga0501043_0000186 Ga0501043_0000186_32383_33603 376
52 3300049579 Ga0501043_0001321 Ga0501043_0001321_10750_11973 376
53 3300049579 Ga0501043_0014527 Ga0501043_0014527_2292_3596 376
54 3300049580 Ga0501046_0021037 Ga0501046_0021037_1770_3074 376
55 3300049580 Ga0501046_0025575 Ga0501046_0025575_1770_3074 376
56 3300049581 Ga0501047_0003918 Ga0501047_0003918_8261_9565 376
57 3300049581 Ga0501047_0006653 Ga0501047_0006653_2805_4028 376
58 3300049581 Ga0501047_0107578 Ga0501047_0107578_1045_2265 376
59 3300049586 Ga0501070_0002340 Ga0501070_0002340_14212_15435 376
60 3300049587 Ga0501071_0048373 Ga0501071_0048373_536_1759 376
61 3300049822 Ga0501035_0000018 Ga0501035_0000018_124424_125647 376
62 3300049822 Ga0501035_0000460 Ga0501035_0000460_12653_13957 376
63 3300049823 Ga0501044_0000042 Ga0501044_0000042_150021_151235 376
64 3300049823 Ga0501044_0000283 Ga0501044_0000283_47070_48374 376
65 3300028556 Ga0265337_1006657 Ga0265337_10066574 377
66 3300028563 Ga0265319_1003195 Ga0265319_10031955 377
67 3300028563 Ga0265319_1012954 Ga0265319_10129542 377
68 3300031240 Ga0265320_10000113 Ga0265320_1000011351 377
69 3300031240 Ga0265320_10000831 Ga0265320_100008315 377
70 3300031250 Ga0265331_10054924 Ga0265331_100549241 377
71 3300031251 Ga0265327_10000029 Ga0265327_10000029132 377
72 3300031595 Ga0265313_10003576 Ga0265313_100035766 377
73 3300002155 JGI24033J26618_1000007 JGI24033J26618_100000744 378
74 3300003320 rootH2_10007403 rootH2_1000740314 378
75 3300003322 rootL2_10225933 rootL2_102259332 378
76 3300003323 rootH1_10014482 rootH1_100144822 378
77 3300005334 Ga0068869_100000056 Ga0068869_10000005619 378
78 3300005344 Ga0070661_100003699 Ga0070661_1000036992 378
79 3300005459 Ga0068867_100002543 Ga0068867_10000254310 378
80 3300005577 Ga0068857_100023607 Ga0068857_1000236075 378
81 3300005617 Ga0068859_100306568 Ga0068859_1003065682 378
82 3300006028 Ga0070717_10000130 Ga0070717_1000013033 378
83 3300006237 Ga0097621_100001090 Ga0097621_10000109014 378
84 3300006931 Ga0097620_100306563 Ga0097620_1003065632 378
85 3300013308 Ga0157375_10383682 Ga0157375_103836821 378
86 3300025920 Ga0207649_10000239 Ga0207649_1000023932 378
87 3300025942 Ga0207689_10000102 Ga0207689_1000010250 378
88 3300026089 Ga0207648_10002511 Ga0207648_100025119 378
89 3300026116 Ga0207674_10058630 Ga0207674_100586302 378
90 3300028558 Ga0265326_10017630 Ga0265326_100176302 378
91 3300028563 Ga0265319_1001169 Ga0265319_10011692 378
92 3300028563 Ga0265319_1004678 Ga0265319_10046784 378
93 3300028573 Ga0265334_10003350 Ga0265334_100033505 378
94 3300028577 Ga0265318_10000038 Ga0265318_10000038119 378
95 3300028577 Ga0265318_10004325 Ga0265318_100043254 378
96 3300028577 Ga0265318_10004628 Ga0265318_100046282 378
97 3300028577 Ga0265318_10013935 Ga0265318_100139352 378
98 3300028653 Ga0265323_10001782 Ga0265323_1000178210 378
99 3300028666 Ga0265336_10002112 Ga0265336_100021122 378
100 3300028800 Ga0265338_10008792 Ga0265338_100087925 378
101 3300029957 Ga0265324_10000385 Ga0265324_1000038520 378
102 3300029957 Ga0265324_10005784 Ga0265324_100057844 378
103 3300031235 Ga0265330_10002370 Ga0265330_1000237014 378
104 3300031235 Ga0265330_10037280 Ga0265330_100372801 378
105 3300031240 Ga0265320_10001815 Ga0265320_100018154 378
106 3300031240 Ga0265320_10005073 Ga0265320_100050734 378
107 3300031240 Ga0265320_10013127 Ga0265320_100131272 378
108 3300031240 Ga0265320_10021445 Ga0265320_100214453 378
109 3300031250 Ga0265331_10002824 Ga0265331_100028243 378
110 3300031251 Ga0265327_10001172 Ga0265327_100011727 378
111 3300031251 Ga0265327_10002034 Ga0265327_100020348 378
112 3300031251 Ga0265327_10006476 Ga0265327_100064765 378
113 3300031344 Ga0265316_10004859 Ga0265316_100048598 378
114 3300031344 Ga0265316_10020050 Ga0265316_100200505 378
115 3300031344 Ga0265316_10021913 Ga0265316_100219134 378
116 3300031344 Ga0265316_10024309 Ga0265316_100243094 378
117 3300031344 Ga0265316_10091136 Ga0265316_100911362 378
118 3300031548 Ga0307408_100000011 Ga0307408_100000011172 378
119 3300031595 Ga0265313_10003948 Ga0265313_100039484 378
120 3300031616 Ga0307508_10000014 Ga0307508_1000001418 378
121 3300031711 Ga0265314_10002467 Ga0265314_1000246712 378
122 3300031711 Ga0265314_10007380 Ga0265314_100073803 378
123 3300031852 Ga0307410_10000051 Ga0307410_100000518 378
124 3300031995 Ga0307409_100000096 Ga0307409_10000009620 378
125 3300032002 Ga0307416_100000123 Ga0307416_10000012341 378
126 3300042876 Ga0451577_0111108 Ga0451577_0111108_1073_2308 378
127 3300042876 Ga0451577_0358311 Ga0451577_0358311_26_1264 378
128 3300044673 Ga0453683_0000626 Ga0453683_0000626_8674_9933 378
129 3300044712 Ga0453684_0070606 Ga0453684_0070606_3037_4275 378
130 3300044712 Ga0453684_0426891 Ga0453684_0426891_167_1429 378
131 3300044842 Ga0466957_0016517 Ga0466957_0016517_887_2092 378
132 3300046689 Ga0495613_0145851 Ga0495613_0145851_24_1247 378
133 3300047444 Ga0495675_0057275 Ga0495675_0057275_633_1880 378
134 3300048910 Ga0496107_0034374 Ga0496107_0034374_730_1953 378
135 3300049568 Ga0501031_0047859 Ga0501031_0047859_273_1532 378
136 3300049569 Ga0501032_0000139 Ga0501032_0000139_32027_33253 378
137 3300049569 Ga0501032_0000815 Ga0501032_0000815_23281_24540 378
138 3300049569 Ga0501032_0032427 Ga0501032_0032427_1108_2373 378
139 3300049570 Ga0501033_0000009 Ga0501033_0000009_111492_112718 378
140 3300049570 Ga0501033_0009884 Ga0501033_0009884_434_1699 378
141 3300049571 Ga0501034_0053885 Ga0501034_0053885_2512_3771 378
142 3300049572 Ga0501036_0059807 Ga0501036_0059807_1202_2461 378
143 3300049573 Ga0501037_0017796 Ga0501037_0017796_396_1661 378
144 3300049574 Ga0501038_0000417 Ga0501038_0000417_23268_24527 378
145 3300049574 Ga0501038_0000555 Ga0501038_0000555_31601_32830 378
146 3300049575 Ga0501039_0120193 Ga0501039_0120193_190_1449 378
147 3300049578 Ga0501042_0055159 Ga0501042_0055159_966_2225 378
148 3300049579 Ga0501043_0031073 Ga0501043_0031073_86_1345 378
149 3300049580 Ga0501046_0012429 Ga0501046_0012429_2441_3706 378
150 3300049582 Ga0501048_0030449 Ga0501048_0030449_1817_3076 378
151 3300049582 Ga0501048_0060550 Ga0501048_0060550_756_2021 378
152 3300049586 Ga0501070_0064167 Ga0501070_0064167_1422_2681 378
153 3300049742 Ga0501080_0196092 Ga0501080_0196092_130_1389 378
154 3300049744 Ga0501083_0028047 Ga0501083_0028047_1713_2972 378
155 3300049823 Ga0501044_0002683 Ga0501044_0002683_17489_18754 378
156 3300049823 Ga0501044_0005233 Ga0501044_0005233_8525_9763 378
157 3300049824 Ga0501045_0007615 Ga0501045_0007615_1222_2481 378
158 iso_pu_bacteria 2786546940 2788435458 378

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22780

HI0933_like_1st

HI0933-like protein barrel and H2TH domain

260

421

0.98

PF03486

HI0933_like

HI0933-like protein Rossmann domain

76

475

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3f8d-assembly2.cif.gz_D structure of sulfolobus solfataricus thioredoxin reductase mutant c147a 0.8879 84 139
4u3n-assembly1.cif.gz_C8 crystal structure of cca trinucleotide bound to the yeast 80s ribosome 0.8798 268 302
3f8d-assembly1.cif.gz_B structure of sulfolobus solfataricus thioredoxin reductase mutant c147a 0.8748 84 139
1hnw-assembly1.cif.gz_M structure of the thermus thermophilus 30s ribosomal subunit in complex with tetracycline 0.8737 268 304
3f8r-assembly2.cif.gz_D crystal structure of sulfolobus solfataricus thioredoxin reductase b3 in complex with two nadp molecules 0.8722 84 140
ID Description Score Start End Superfamily
af_C6TL13_75_486_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8919 1 373 3.50.50.60
af_Q2FW30_1_70_1.10.8.50 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.8859 258 303 1.10.8.50
af_A0A1D8PQQ5_1_82_1.10.8.50 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.8844 257 303 1.10.8.50
af_C6TL13_75_486_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8788 1 373 3.50.50.60
af_P61076_114_581_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.876 95 132 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A3D3XG81-F1-model_v4 Aminoacetone oxidase family FAD-binding enzyme 0.9698 4 128
AF-A0A090WPG7-F1-model_v4 NAD(FAD)-utilizing dehydrogenases 0.969 4 130
AF-A0A3C1V9J1-F1-model_v4 Aminoacetone oxidase family FAD-binding enzyme 0.9661 1 124
AF-A0A2V6I9C4-F1-model_v4 Aminoacetone oxidase family FAD-binding enzyme 0.9654 2 123
AF-A0A355FSI9-F1-model_v4 Aminoacetone oxidase family FAD-binding enzyme 0.9651 195 312

Feature Viewer

pLDDT pTM Quality
88.78 0.83 High
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Predicted Structure (AlphaFold2)

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