F229294

General Info

Members Datasets Scaffolds Average Seq Length
158 122 316 716

Family's Representative Sequence

Representative Sequence 3300005841|Ga0068863_100014144|Ga0068863_1000141442
Length 751
Sequence MRFILLKAVSLLCHIHFHAVVAVFNQQLLHTSLFFMKKHFVNILTLICSFTAVAQTGKPIIIEAKTVALVLMVDNNQNVHQSYLGKKLNTAEYGQLRGGQEVYLTAGTENQFEPSIRMIHADGNPSLELKYVSHQTTVDGNVSQTTILLKDPVYPVEITLHYSSYFNEDVIRTWTEIKHKEAKPVLLTHYNSSLLHFTADEYWLTQFHGDWAREMNMVEEKLTNGIKAIESKLGTRANFYQSQAFFLSLNKPSTETTGELIAGLLDWTGNFKYSFEVDQRNGLRFHAGINPYASEYNLPSGENFTTPAFTFTYSANGKGQASRNLHRWARKYGVLDGEAPRMVLLNNWEATHTNFTETGLVELFDEAKKLGADLFLLDDGWFGNKFPRNDDKAGLGDWQEDKKKLPSGIGFLVKEAEKKGIKFGIWLEPEMVNPKSELYEKHPDWILKLPNRPESYGRNQLVLDLINPKVQDFVFSIVDDMLTKYPGLAFIKWDCNRSMTNAYSPYLKEKQTHLYIEYTKSLYKIMDRIRAKYPHFPIMLCSGGGGRIDYGAMKYFTEFWPSDNTDGLERIFIQWGYSYFFPANTISAHVTSMGKQSLKFRTDVAMMGKLGYDIRVNSFTAQELQFSQEAVQTYKRINDIIWFGDLYRLISPYEENRAVLMYVNENKSKAILFNYTTNIRRKDIFSRVLLRGLDPGKKYRFKEINLFPETRSFQPDNDKLLTGEYLMNIGINLSAGRVSSLTSNVYELSAE

Samples

Sample ID Description Type Environment
1 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300000043 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 young rhizosphere Metagenome Rhizosphere
4 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
26 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
30 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
33 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
34 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
35 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
36 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
37 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
38 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
42 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
43 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
44 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
46 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
47 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
49 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
50 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
73 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
74 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
75 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
76 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
77 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
78 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
79 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
80 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
81 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
82 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
83 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
84 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
85 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
86 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
87 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
88 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
89 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
90 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
91 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
92 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
93 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
94 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
95 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
96 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
97 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
98 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
99 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
100 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
101 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
102 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
103 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
104 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
105 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
106 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
107 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
108 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
109 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
110 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
111 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
112 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
113 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
114 2738541278 Niastella sp. CF465 Isolate Unclassified
115 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
116 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
117 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
118 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
119 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
120 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
121 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
122 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.67
Metatranscriptomes 0
Isolates 6.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.76
Nodule 0
Rhizoplane 0.63
Rhizosphere 81.01
Stem 0
Stem Tuber 0
Unclassified 0.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068863_100014144 3300005841 Bacteria 7688
2 SwRhRL2b_contig_1482229 2162886007 Bacteria 32470
3 ARcpr5yngRDRAFT_c001192 3300000043 Bacteria 2927
4 JGI24739J22299_10001206 3300001989 Bacteria 9682
5 JGI24739J22299_10002324 3300001989 Bacteria 7327
6 rootH2_10014335 3300003320 Bacteria 6955
7 rootH1_10351552 3300003323 Bacteria 2676
8 JGI25160J50197_1013444 3300003354 Bacteria 2790
9 Ga0070658_10002567 3300005327 Bacteria 15136
10 Ga0070683_100004733 3300005329 Bacteria 11255
11 Ga0070683_100035417 3300005329 Bacteria 4563
12 Ga0070670_100027316 3300005331 Bacteria 4910
13 Ga0070670_100042122 3300005331 Bacteria 3924
14 Ga0068869_100008883 3300005334 Bacteria 6501
15 Ga0070666_10000409 3300005335 Bacteria 26703
16 Ga0070661_100026404 3300005344 Bacteria 4177
17 Ga0070659_100008722 3300005366 Bacteria 7419
18 Ga0070667_100011454 3300005367 Bacteria 7333
19 Ga0070663_100076145 3300005455 Bacteria 2453
20 Ga0070698_100094162 3300005471 Bacteria 2974
21 Ga0070679_100004268 3300005530 Bacteria 13186
22 Ga0070679_100068837 3300005530 Unclassified 3531
23 Ga0068855_100003577 3300005563 Bacteria 18988
24 Ga0068852_100008971 3300005616 Bacteria 7400
25 Ga0068859_100000030 3300005617 Bacteria 175435
26 Ga0068859_100009860 3300005617 Bacteria 9643
27 Ga0068864_100004763 3300005618 Bacteria 11118
28 Ga0068858_100026655 3300005842 Bacteria 5368
29 Ga0068860_100005755 3300005843 Bacteria 12501
30 Ga0068860_100031433 3300005843 Bacteria 5104
31 Ga0075366_10000514 3300006195 Bacteria 17870
32 Ga0097621_100055581 3300006237 Bacteria 3233
33 Ga0097620_100000030 3300006931 Bacteria 175435
34 Ga0097620_100009860 3300006931 Bacteria 9643
35 Ga0114129_10001614 3300009147 Bacteria 30617
36 Ga0105241_10009088 3300009174 Bacteria 7312
37 Ga0105241_10019486 3300009174 Bacteria 5003
38 Ga0105237_10018269 3300009545 Bacteria 7256
39 Ga0105249_10000967 3300009553 Bacteria 25430
40 Ga0105249_10001594 3300009553 Bacteria 19871
41 Ga0105246_10005699 3300011119 Bacteria 7600
42 Ga0157373_10000018 3300013100 Bacteria 169293
43 Ga0157373_10000109 3300013100 Bacteria 64743
44 Ga0157373_10032585 3300013100 Bacteria 3750
45 Ga0157371_10001565 3300013102 Bacteria 23529
46 Ga0157371_10003012 3300013102 Bacteria 15641
47 Ga0157371_10003262 3300013102 Bacteria 14878
48 Ga0157371_10006666 3300013102 Bacteria 9450
49 Ga0157371_10011813 3300013102 Bacteria 6706
50 Ga0157370_10009659 3300013104 Bacteria 10260
51 Ga0157374_10036274 3300013296 Bacteria 4515
52 Ga0157378_10018094 3300013297 Bacteria 6188
53 Ga0163162_10000323 3300013306 Bacteria 43956
54 Ga0163162_10000348 3300013306 Bacteria 42027
55 Ga0157372_10000449 3300013307 Bacteria 45309
56 Ga0157372_10000631 3300013307 Bacteria 38536
57 Ga0157372_10002976 3300013307 Bacteria 18253
58 Ga0157372_10003467 3300013307 Bacteria 17018
59 Ga0157372_10108827 3300013307 Bacteria 3173
60 Ga0163163_10005863 3300014325 Bacteria 10689
61 Ga0157379_10007725 3300014968 Bacteria 9309
62 Ga0157376_10064598 3300014969 Bacteria 3088
63 Ga0209436_102272 3300025208 Bacteria 5918
64 Ga0209258_100081 3300025242 Bacteria 254564
65 Ga0209646_1001422 3300025246 Bacteria 6451
66 Ga0209026_1000499 3300025250 Bacteria 28538
67 Ga0209148_1000276 3300025254 Bacteria 80610
68 Ga0209130_1000510 3300025284 Bacteria 39344
69 Ga0207426_1000024 3300025302 Bacteria 534075
70 Ga0207656_10019527 3300025321 Bacteria 2682
71 Ga0207680_10000347 3300025903 Bacteria 22173
72 Ga0207647_10001251 3300025904 Bacteria 19541
73 Ga0207705_10000494 3300025909 Bacteria 33635
74 Ga0207671_10026364 3300025914 Bacteria 4358
75 Ga0207660_10047377 3300025917 Bacteria 3038
76 Ga0207657_10050893 3300025919 Bacteria 3602
77 Ga0207649_10012573 3300025920 Bacteria 4701
78 Ga0207652_10000043 3300025921 Bacteria 128581
79 Ga0207650_10057075 3300025925 Bacteria 2903
80 Ga0207690_10034191 3300025932 Bacteria 3274
81 Ga0207689_10003612 3300025942 Bacteria 14132
82 Ga0207689_10036015 3300025942 Bacteria 4108
83 Ga0207661_10071753 3300025944 Bacteria 2831
84 Ga0207667_10001665 3300025949 Bacteria 27992
85 Ga0207712_10000718 3300025961 Bacteria 25508
86 Ga0207658_10007305 3300025986 Bacteria 7535
87 Ga0207703_10002529 3300026035 Bacteria 15802
88 Ga0207641_10000530 3300026088 Bacteria 42749
89 Ga0207648_10011221 3300026089 Bacteria 8449
90 Ga0207676_10003086 3300026095 Bacteria 11892
91 Ga0268265_10043738 3300028380 Bacteria 3331
92 Ga0268264_10002872 3300028381 Bacteria 14997
93 Ga0268264_10004356 3300028381 Bacteria 12082
94 Ga0268264_10018465 3300028381 Bacteria 5703
95 Ga0307515_10000001 3300028794 Bacteria 4259510
96 Ga0307515_10000071 3300028794 Bacteria 238152
97 Ga0307515_10001828 3300028794 Bacteria 47434
98 Ga0307408_100000365 3300031548 Bacteria 41732
99 Ga0307408_100001503 3300031548 Bacteria 17317
100 Ga0307412_10000009 3300031911 Bacteria 445987
101 Ga0307412_10002911 3300031911 Bacteria 9492
102 Ga0307414_10006550 3300032004 Bacteria 6499
103 Ga0373927_0037379 3300035695 Bacteria 3156
104 Ga0395899_0043820 3300037312 Bacteria 3335
105 Ga0395900_0025028 3300037418 Bacteria 6109
106 Ga0395898_0014463 3300037466 Bacteria 8105
107 Ga0395898_0093921 3300037466 Bacteria 2882
108 Ga0395905_0002927 3300037471 Bacteria 18592
109 Ga0395901_0012564 3300038443 Bacteria 8593
110 Ga0439457_001691 3300042014 Bacteria 6539
111 Ga0466969_0000151 3300044656 Bacteria 37632
112 Ga0466972_0000007 3300044658 Bacteria 277010
113 Ga0466972_0015389 3300044658 Bacteria 3823
114 Ga0466966_0000113 3300044684 Bacteria 49984
115 Ga0466957_0002318 3300044842 Bacteria 10206
116 Ga0466957_0010013 3300044842 Bacteria 5426
117 Ga0466959_0000015 3300045049 Bacteria 149242
118 Ga0466959_0007637 3300045049 Bacteria 7603
119 Ga0451576_0029716 3300045051 Bacteria 5846
120 Ga0451576_0119513 3300045051 Bacteria 2743
121 Ga0495650_0000003 3300046471 Bacteria 900730
122 Ga0495585_0000704 3300046492 Bacteria 30119
123 Ga0495606_0000002 3300046507 Bacteria 554637
124 Ga0495610_0006986 3300046512 Bacteria 7636
125 Ga0495616_0007142 3300046513 Bacteria 6700
126 Ga0495648_0006172 3300046524 Bacteria 9818
127 Ga0495633_0000043 3300046558 Bacteria 172356
128 Ga0495633_0017742 3300046558 Bacteria 3630
129 Ga0495668_0000127 3300046616 Bacteria 114097
130 Ga0495668_0006381 3300046616 Bacteria 7729
131 Ga0495625_0000005 3300046660 Bacteria 596135
132 Ga0495625_0000993 3300046660 Bacteria 37558
133 Ga0495661_0016448 3300046665 Bacteria 4903
134 Ga0495671_0021455 3300046692 Bacteria 3393
135 Ga0495649_0000003 3300046694 Bacteria 880817
136 Ga0501219_000047 3300049703 Bacteria 19832
137 Ga0501284_00011 3300050005 Bacteria 131008
138 nmdc:mga0k408_4417_c1 3300050493 Bacteria 7467
139 nmdc:mga0k408_570_c1 3300050493 Bacteria 20339
140 nmdc:mga05p37_18464_c1 3300050507 Bacteria 8425
141 Ga0500644_0000263 3300053088 Bacteria 29657
142 Ga0500583_0000053 3300053092 Bacteria 74724
143 Ga0500651_0000143 3300053093 Bacteria 44885
144 Ga0500562_000011 3300053108 Bacteria 179510
145 Ga0500618_000036 3300053125 Bacteria 118803
146 Ga0500568_0000792 3300053139 Bacteria 22308
147 Ga0500577_0004810 3300053142 Bacteria 3592
148 Ga0500611_000002 3300053727 Bacteria 345991
149 2599477926 2599185184 Bacteria 6430550
150 2738724374 2738541278 Bacteria 9755573
151 2819676896 2818991460 Bacteria 7595395
152 2919187425 2919186247 Bacteria 6244071
153 2919438829 2919437846 Bacteria 6199444
154 2928079886 2928078545 Bacteria 6534839
155 2928147661 2928147474 Bacteria 6512076
156 2929177747 2929177148 Bacteria 7883697
157 2939665308 2939664404 Bacteria 6364494
158 2946014044 2946013367 Bacteria 7766675
159 Ga0068863_100014144
160 SwRhRL2b_contig_1482229
161 ARcpr5yngRDRAFT_c001192
162 JGI24739J22299_10001206
163 JGI24739J22299_10002324
164 rootH2_10014335
165 rootH1_10351552
166 JGI25160J50197_1013444
167 Ga0070658_10002567
168 Ga0070683_100004733
169 Ga0070683_100035417
170 Ga0070670_100027316
171 Ga0070670_100042122
172 Ga0068869_100008883
173 Ga0070666_10000409
174 Ga0070661_100026404
175 Ga0070659_100008722
176 Ga0070667_100011454
177 Ga0070663_100076145
178 Ga0070698_100094162
179 Ga0070679_100004268
180 Ga0070679_100068837
181 Ga0068855_100003577
182 Ga0068852_100008971
183 Ga0068859_100000030
184 Ga0068859_100009860
185 Ga0068864_100004763
186 Ga0068858_100026655
187 Ga0068860_100005755
188 Ga0068860_100031433
189 Ga0075366_10000514
190 Ga0097621_100055581
191 Ga0097620_100000030
192 Ga0097620_100009860
193 Ga0114129_10001614
194 Ga0105241_10009088
195 Ga0105241_10019486
196 Ga0105237_10018269
197 Ga0105249_10000967
198 Ga0105249_10001594
199 Ga0105246_10005699
200 Ga0157373_10000018
201 Ga0157373_10000109
202 Ga0157373_10032585
203 Ga0157371_10001565
204 Ga0157371_10003012
205 Ga0157371_10003262
206 Ga0157371_10006666
207 Ga0157371_10011813
208 Ga0157370_10009659
209 Ga0157374_10036274
210 Ga0157378_10018094
211 Ga0163162_10000323
212 Ga0163162_10000348
213 Ga0157372_10000449
214 Ga0157372_10000631
215 Ga0157372_10002976
216 Ga0157372_10003467
217 Ga0157372_10108827
218 Ga0163163_10005863
219 Ga0157379_10007725
220 Ga0157376_10064598
221 Ga0209436_102272
222 Ga0209258_100081
223 Ga0209646_1001422
224 Ga0209026_1000499
225 Ga0209148_1000276
226 Ga0209130_1000510
227 Ga0207426_1000024
228 Ga0207656_10019527
229 Ga0207680_10000347
230 Ga0207647_10001251
231 Ga0207705_10000494
232 Ga0207671_10026364
233 Ga0207660_10047377
234 Ga0207657_10050893
235 Ga0207649_10012573
236 Ga0207652_10000043
237 Ga0207650_10057075
238 Ga0207690_10034191
239 Ga0207689_10003612
240 Ga0207689_10036015
241 Ga0207661_10071753
242 Ga0207667_10001665
243 Ga0207712_10000718
244 Ga0207658_10007305
245 Ga0207703_10002529
246 Ga0207641_10000530
247 Ga0207648_10011221
248 Ga0207676_10003086
249 Ga0268265_10043738
250 Ga0268264_10002872
251 Ga0268264_10004356
252 Ga0268264_10018465
253 Ga0307515_10000001
254 Ga0307515_10000071
255 Ga0307515_10001828
256 Ga0307408_100000365
257 Ga0307408_100001503
258 Ga0307412_10000009
259 Ga0307412_10002911
260 Ga0307414_10006550
261 Ga0373927_0037379
262 Ga0395899_0043820
263 Ga0395900_0025028
264 Ga0395898_0014463
265 Ga0395898_0093921
266 Ga0395905_0002927
267 Ga0395901_0012564
268 Ga0439457_001691
269 Ga0466969_0000151
270 Ga0466972_0000007
271 Ga0466972_0015389
272 Ga0466966_0000113
273 Ga0466957_0002318
274 Ga0466957_0010013
275 Ga0466959_0000015
276 Ga0466959_0007637
277 Ga0451576_0029716
278 Ga0451576_0119513
279 Ga0495650_0000003
280 Ga0495585_0000704
281 Ga0495606_0000002
282 Ga0495610_0006986
283 Ga0495616_0007142
284 Ga0495648_0006172
285 Ga0495633_0000043
286 Ga0495633_0017742
287 Ga0495668_0000127
288 Ga0495668_0006381
289 Ga0495625_0000005
290 Ga0495625_0000993
291 Ga0495661_0016448
292 Ga0495671_0021455
293 Ga0495649_0000003
294 Ga0501219_000047
295 Ga0501284_00011
296 nmdc:mga0k408_4417_c1
297 nmdc:mga0k408_570_c1
298 nmdc:mga05p37_18464_c1
299 Ga0500644_0000263
300 Ga0500583_0000053
301 Ga0500651_0000143
302 Ga0500562_000011
303 Ga0500618_000036
304 Ga0500568_0000792
305 Ga0500577_0004810
306 Ga0500611_000002
307 2599477926
308 2738724374
309 2819676896
310 2919187425
311 2919438829
312 2928079886
313 2928147661
314 2929177747
315 2939665308
316 2946014044

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02065

Melibiase

Melibiase

303

644

0.97

PF16874

Glyco_hydro_36C

Glycosyl hydrolase family 36 C-terminal domain

657

748

0.94

PF16875

Glyco_hydro_36N

Glycosyl hydrolase family 36 N-terminal domain

73

299

0.9

PF02638

GHL10

Glycosyl hydrolase-like 10

392

531

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
4fnu-assembly1.cif.gz_D crystal structure of gh36 alpha-galactosidase agaa a355e d478a from geobacillus stearothermophilus in complex with stachyose 0.9078 25 720
4fns-assembly1.cif.gz_D crystal structure of gh36 alpha-galactosidase agaa a355e from geobacillus stearothermophilus in complex with 1-deoxygalactonojirimycin 0.9058 25 720
4fnt-assembly1.cif.gz_D crystal structure of gh36 alpha-galactosidase agaa a355e d548n from geobacillus stearothermophilus in complex with raffinose 0.9028 25 720
2xn0-assembly1.cif.gz_A structure of alpha-galactosidase from lactobacillus acidophilus ncfm, ptcl4 derivative 0.9008 24 721
3mi6-assembly1.cif.gz_D crystal structure of the alpha-galactosidase from lactobacillus brevis, northeast structural genomics consortium target lbr11. 0.8992 22 721
ID Description Score Start End Superfamily
2yfnA01 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5;alpha-galactosidase from lactobacil brevis 0.9093 24 286 2.70.98.60
2xn2A01 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5;alpha-galactosidase from lactobacil brevis 0.9043 24 291 2.70.98.60
2xn0A03 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.8952 612 721 2.60.40.1180
4fnqA01 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5;alpha-galactosidase from lactobacil brevis 0.8932 21 291 2.70.98.60
3mi6D01 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5;alpha-galactosidase from lactobacil brevis 0.8827 22 286 2.70.98.60
ID Description Score Start End GO Terms
AF-A0A819Z475-F1-model_v4 alpha-galactosidase (EC 3.2.1.22) 0.9697 25 318 GO:0004557
GO:0016052
AF-A0A7J5J963-F1-model_v4 alpha-galactosidase (EC 3.2.1.22) 0.9669 92 455 GO:0004557
GO:0016052
AF-A0A5J4RS62-F1-model_v4 alpha-galactosidase (EC 3.2.1.22) 0.966 151 531 GO:0004557
GO:0016052
AF-A0A5J4RS62-F1-model_v4 alpha-galactosidase (EC 3.2.1.22) 0.9635 151 531 GO:0004557
GO:0016052
AF-A0A820HUL2-F1-model_v4 Glycosyl hydrolase family 36 N-terminal domain-containing protein 0.9629 25 263

Map