F229306

General Info

Members Datasets Scaffolds Average Seq Length
158 112 316 346

Family's Representative Sequence

Representative Sequence 3300005844|Ga0068862_100047272|Ga0068862_1000472723
Length 395
Sequence VVPKERLGRSLPRLALAALALFDGEHTIHRMHVSDVAIVGAGPIGIELAVALKRAGVDFIHFDARQIAHTISWFAPQTRFFSSNERIAIAGVPLNTADQSKATREDYLAYLRGVITQFDLKINTFEPIIGIERNDHNFTLTSQPPGASRRSHRAKRVVLCTGGTDRPRRLNIPGEDLPHVDHYFKDPHQYFGKRLLIVGGKNSAVETAIRCHNAGAIVSMSYRRDAFPEKSIKYWLMPEIKSLCKTGCIRAYFDSRPTAITPTHVTLEVQRRSVESERVTESESPFHAVTLHPVTFVDIPADFVLALIGFEQDKTLLKLAGVELRGPQKAPVFDENTMETNIPGVYVAGTAVGGTQDKFTVFIENCHVHVDRIVTAITGAHAMDVSQPVYAEPES

Samples

Sample ID Description Type Environment
1 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
18 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
21 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
38 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
39 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
43 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
44 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
45 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
46 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
47 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
69 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
71 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
72 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
73 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
74 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
75 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
76 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
77 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
78 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
79 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
80 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
81 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
82 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
83 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
84 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
85 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
86 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
87 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
88 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
89 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
90 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
91 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
92 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
93 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
94 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
95 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
96 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
97 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
98 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
99 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
100 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
101 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
102 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
103 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
106 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
107 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
108 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
109 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
110 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
111 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
112 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.73
Metatranscriptomes 1.27
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 95.57
Stem 0
Stem Tuber 0
Unclassified 8.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068862_100047272 3300005844 Bacteria 3672
2 rootH1_10091528 3300003323 Bacteria 5654
3 Ga0070683_100000103 3300005329 Bacteria 55332
4 Ga0070683_100199862 3300005329 Bacteria 1898
5 Ga0070670_100000283 3300005331 Bacteria 44752
6 Ga0070680_100051262 3300005336 Bacteria 3367
7 Ga0070682_100000024 3300005337 Bacteria 199229
8 Ga0070682_100025518 3300005337 Bacteria 3528
9 Ga0068868_100000517 3300005338 Bacteria 25829
10 Ga0068868_100001308 3300005338 Bacteria 17160
11 Ga0070689_100006785 3300005340 Bacteria 7964
12 Ga0070692_10053971 3300005345 Bacteria 2097
13 Ga0070675_100000006 3300005354 Bacteria 280013
14 Ga0070701_10000882 3300005438 Bacteria 10805
15 Ga0070700_100000151 3300005441 Bacteria 40597
16 Ga0070708_100010714 3300005445 Bacteria 7441
17 Ga0070699_100289631 3300005518 Bacteria 1468
18 Ga0070684_100000272 3300005535 Bacteria 35847
19 Ga0068853_100007977 3300005539 Bacteria 8490
20 Ga0070672_100000366 3300005543 Bacteria 26021
21 Ga0070686_100087414 3300005544 Bacteria 2078
22 Ga0070665_100165979 3300005548 Bacteria 2210
23 Ga0068854_100006934 3300005578 Bacteria 7226
24 Ga0070702_100136406 3300005615 Bacteria 1557
25 Ga0068864_100000034 3300005618 Bacteria 199411
26 Ga0068861_100153314 3300005719 Bacteria 1893
27 Ga0068858_100000245 3300005842 Bacteria 58452
28 Ga0068858_100115064 3300005842 Unclassified 2513
29 Ga0081539_10009980 3300005985 Bacteria 7824
30 Ga0075428_100058045 3300006844 Bacteria 4237
31 Ga0075430_100012538 3300006846 Bacteria 7215
32 Ga0075431_100010644 3300006847 Bacteria 9245
33 Ga0075434_100464632 3300006871 Bacteria 1287
34 Ga0075435_100017239 3300007076 Bacteria 5461
35 Ga0105240_10006837 3300009093 Bacteria 16680
36 Ga0111539_10033528 3300009094 Bacteria 6234
37 Ga0111539_10228743 3300009094 Bacteria 2166
38 Ga0105245_10000013 3300009098 Bacteria 266248
39 Ga0105245_10001877 3300009098 Bacteria 19067
40 Ga0105238_10000001 3300009551 Bacteria 2036163
41 Ga0105239_10675304 3300010375 Bacteria 1180
42 Ga0157369_10000189 3300013105 Bacteria 85144
43 Ga0157369_10046185 3300013105 Bacteria 4734
44 Ga0157374_10000010 3300013296 Bacteria 505635
45 Ga0157374_10088815 3300013296 Bacteria 2944
46 Ga0157378_10043065 3300013297 Bacteria 4008
47 Ga0163162_10022534 3300013306 Bacteria 6207
48 Ga0157372_10422491 3300013307 Bacteria 1553
49 Ga0157375_10000002 3300013308 Bacteria 495826
50 Ga0157375_10001801 3300013308 Bacteria 18369
51 Ga0157380_10021977 3300014326 Unclassified 4792
52 Ga0157377_10000015 3300014745 Bacteria 190735
53 Ga0157376_10000019 3300014969 Bacteria 255553
54 Ga0213873_10000003 3300021358 Bacteria 973849
55 Ga0213873_10013799 3300021358 Bacteria 1778
56 Ga0213876_10000003 3300021384 Bacteria 973849
57 Ga0213876_10000014 3300021384 Bacteria 310412
58 Ga0213876_10019360 3300021384 Bacteria 3596
59 Ga0207695_10000112 3300025913 Bacteria 248037
60 Ga0207695_10081379 3300025913 Bacteria 3277
61 Ga0207660_10026212 3300025917 Bacteria 3968
62 Ga0207646_10209027 3300025922 Bacteria 1762
63 Ga0207694_10000001 3300025924 Bacteria 4078485
64 Ga0207650_10000166 3300025925 Bacteria 79838
65 Ga0207659_10000008 3300025926 Bacteria 321286
66 Ga0207687_10000014 3300025927 Bacteria 297704
67 Ga0207687_10002608 3300025927 Bacteria 12232
68 Ga0207687_10004619 3300025927 Bacteria 9160
69 Ga0207686_10007674 3300025934 Bacteria 5816
70 Ga0207670_10002168 3300025936 Bacteria 10270
71 Ga0207704_10106449 3300025938 Bacteria 1884
72 Ga0207691_10004161 3300025940 Bacteria 14057
73 Ga0207661_10000007 3300025944 Bacteria 471636
74 Ga0207661_10116090 3300025944 Bacteria 2272
75 Ga0207640_10048582 3300025981 Bacteria 2744
76 Ga0207677_10000005 3300026023 Bacteria 287656
77 Ga0207677_10000238 3300026023 Bacteria 42939
78 Ga0207677_10383430 3300026023 Unclassified 1187
79 Ga0207703_10000155 3300026035 Bacteria 79031
80 Ga0207703_10064106 3300026035 Bacteria 3015
81 Ga0207639_10000007 3300026041 Bacteria 451321
82 Ga0207678_10208549 3300026067 Unclassified 1671
83 Ga0207708_10000270 3300026075 Bacteria 40563
84 Ga0207648_10337443 3300026089 Bacteria 1357
85 Ga0207676_10000020 3300026095 Bacteria 301541
86 Ga0207675_100229704 3300026118 Bacteria 1790
87 Ga0207428_10038684 3300027907 Bacteria 3876
88 Ga0268265_10117274 3300028380 Unclassified 2186
89 Ga0316579_10000095 3300031691 Bacteria 23137
90 Ga0316579_10024835 3300031691 Bacteria 2700
91 Ga0316579_10030318 3300031691 Bacteria 2471
92 Ga0316576_10000086 3300031727 Bacteria 32448
93 Ga0316576_10020445 3300031727 Bacteria 4558
94 Ga0316578_10003147 3300031728 Bacteria 7460
95 Ga0316578_10008511 3300031728 Bacteria 5226
96 Ga0316578_10089191 3300031728 Unclassified 1840
97 Ga0316578_10168990 3300031728 Bacteria 1318
98 Ga0316577_10001002 3300031733 Bacteria 12653
99 Ga0316577_10002810 3300031733 Bacteria 8687
100 Ga0316577_10011216 3300031733 Bacteria 4854
101 Ga0316577_10041565 3300031733 Bacteria 2572
102 Ga0307410_10023674 3300031852 Bacteria 3823
103 Ga0307407_10102603 3300031903 Unclassified 1779
104 Ga0307409_100186922 3300031995 Unclassified 1840
105 Ga0307411_10116574 3300032005 Unclassified 1923
106 Ga0307415_100091187 3300032126 Bacteria 2207
107 Ga0316583_10000040 3300032133 Bacteria 25103
108 Ga0316583_10017308 3300032133 Bacteria 2593
109 Ga0316585_10000403 3300032137 Bacteria 9994
110 Ga0316580_10000309 3300032139 Bacteria 10658
111 Ga0316593_10029808 3300032168 Bacteria 1767
112 Ga0316596_1004878 3300033541 Bacteria 3032
113 Ga0316574_0003092 3300035398 Bacteria 8496
114 Ga0316574_0084661 3300035398 Unclassified 2017
115 Ga0316574_0116870 3300035398 Unclassified 1711
116 Ga0373937_0042480 3300036401 Bacteria 4148
117 Ga0316582_0000675 3300036647 Bacteria 13403
118 Ga0316582_0019630 3300036647 Bacteria 3961
119 Ga0316584_0000065 3300036712 Bacteria 41449
120 Ga0316584_0006528 3300036712 Bacteria 7901
121 Ga0316584_0036063 3300036712 Bacteria 3670
122 Ga0316584_0091116 3300036712 Bacteria 2282
123 Ga0395898_0231582 3300037466 Bacteria 1762
124 Ga0316581_0001908 3300037588 Bacteria 4870
125 Ga0316581_0014069 3300037588 Bacteria 2274
126 Ga0316581_0048425 3300037588 Bacteria 1301
127 Ga0395901_0259562 3300038443 Bacteria 1809
128 Ga0436365_0013393 3300039437 Bacteria 46110
129 Ga0436365_1171278 3300039437 Bacteria 105378
130 Ga0436365_1624267 3300039437 Bacteria 4371
131 Ga0436362_0263779 3300039453 Bacteria 319094
132 Ga0436362_0711124 3300039453 Bacteria 15359
133 Ga0466972_0065791 3300044658 Bacteria 1733
134 Ga0466965_0000955 3300044683 Bacteria 11152
135 Ga0466968_0002692 3300044735 Bacteria 6549
136 Ga0466960_0007998 3300044901 Bacteria 4316
137 Ga0495618_0031520 3300046514 Bacteria 3317
138 Ga0495620_0014695 3300046515 Bacteria 3971
139 Ga0495635_0034402 3300046663 Bacteria 3514
140 Ga0495613_0009817 3300046689 Bacteria 7118
141 Ga0495674_0054998 3300047319 Unclassified 3492
142 Ga0495684_0016983 3300047471 Bacteria 5607
143 Ga0495684_0220198 3300047471 Bacteria 1392
144 Ga0501034_0007882 3300049571 Bacteria 11321
145 Ga0501034_0033535 3300049571 Bacteria 5208
146 Ga0501037_0036999 3300049573 Bacteria 3597
147 Ga0501070_0192265 3300049586 Unclassified 1677
148 Ga0501083_0006170 3300049744 Bacteria 8502
149 Ga0501044_0011067 3300049823 Bacteria 9785
150 Ga0501044_0011689 3300049823 Bacteria 9510
151 nmdc:mga06r32_1687_c1 3300050510 Bacteria 19892
152 nmdc:mga06r32_40506_c1 3300050510 Bacteria 4423
153 nmdc:mga08y16_3009_c1 3300050511 Bacteria 17386
154 nmdc:mga08y16_75705_c1 3300050511 Bacteria 3508
155 nmdc:mga0n895_176286_c1 3300050512 Unclassified 2168
156 nmdc:mga0n895_195832_c1 3300050512 Bacteria 2052
157 nmdc:mga0rr50_22194_c1 3300050513 Bacteria 4352
158 Ga0501082_0142247 3300060353 Bacteria 2082
159 Ga0068862_100047272
160 rootH1_10091528
161 Ga0070683_100000103
162 Ga0070683_100199862
163 Ga0070670_100000283
164 Ga0070680_100051262
165 Ga0070682_100000024
166 Ga0070682_100025518
167 Ga0068868_100000517
168 Ga0068868_100001308
169 Ga0070689_100006785
170 Ga0070692_10053971
171 Ga0070675_100000006
172 Ga0070701_10000882
173 Ga0070700_100000151
174 Ga0070708_100010714
175 Ga0070699_100289631
176 Ga0070684_100000272
177 Ga0068853_100007977
178 Ga0070672_100000366
179 Ga0070686_100087414
180 Ga0070665_100165979
181 Ga0068854_100006934
182 Ga0070702_100136406
183 Ga0068864_100000034
184 Ga0068861_100153314
185 Ga0068858_100000245
186 Ga0068858_100115064
187 Ga0081539_10009980
188 Ga0075428_100058045
189 Ga0075430_100012538
190 Ga0075431_100010644
191 Ga0075434_100464632
192 Ga0075435_100017239
193 Ga0105240_10006837
194 Ga0111539_10033528
195 Ga0111539_10228743
196 Ga0105245_10000013
197 Ga0105245_10001877
198 Ga0105238_10000001
199 Ga0105239_10675304
200 Ga0157369_10000189
201 Ga0157369_10046185
202 Ga0157374_10000010
203 Ga0157374_10088815
204 Ga0157378_10043065
205 Ga0163162_10022534
206 Ga0157372_10422491
207 Ga0157375_10000002
208 Ga0157375_10001801
209 Ga0157380_10021977
210 Ga0157377_10000015
211 Ga0157376_10000019
212 Ga0213873_10000003
213 Ga0213873_10013799
214 Ga0213876_10000003
215 Ga0213876_10000014
216 Ga0213876_10019360
217 Ga0207695_10000112
218 Ga0207695_10081379
219 Ga0207660_10026212
220 Ga0207646_10209027
221 Ga0207694_10000001
222 Ga0207650_10000166
223 Ga0207659_10000008
224 Ga0207687_10000014
225 Ga0207687_10002608
226 Ga0207687_10004619
227 Ga0207686_10007674
228 Ga0207670_10002168
229 Ga0207704_10106449
230 Ga0207691_10004161
231 Ga0207661_10000007
232 Ga0207661_10116090
233 Ga0207640_10048582
234 Ga0207677_10000005
235 Ga0207677_10000238
236 Ga0207677_10383430
237 Ga0207703_10000155
238 Ga0207703_10064106
239 Ga0207639_10000007
240 Ga0207678_10208549
241 Ga0207708_10000270
242 Ga0207648_10337443
243 Ga0207676_10000020
244 Ga0207675_100229704
245 Ga0207428_10038684
246 Ga0268265_10117274
247 Ga0316579_10000095
248 Ga0316579_10024835
249 Ga0316579_10030318
250 Ga0316576_10000086
251 Ga0316576_10020445
252 Ga0316578_10003147
253 Ga0316578_10008511
254 Ga0316578_10089191
255 Ga0316578_10168990
256 Ga0316577_10001002
257 Ga0316577_10002810
258 Ga0316577_10011216
259 Ga0316577_10041565
260 Ga0307410_10023674
261 Ga0307407_10102603
262 Ga0307409_100186922
263 Ga0307411_10116574
264 Ga0307415_100091187
265 Ga0316583_10000040
266 Ga0316583_10017308
267 Ga0316585_10000403
268 Ga0316580_10000309
269 Ga0316593_10029808
270 Ga0316596_1004878
271 Ga0316574_0003092
272 Ga0316574_0084661
273 Ga0316574_0116870
274 Ga0373937_0042480
275 Ga0316582_0000675
276 Ga0316582_0019630
277 Ga0316584_0000065
278 Ga0316584_0006528
279 Ga0316584_0036063
280 Ga0316584_0091116
281 Ga0395898_0231582
282 Ga0316581_0001908
283 Ga0316581_0014069
284 Ga0316581_0048425
285 Ga0395901_0259562
286 Ga0436365_0013393
287 Ga0436365_1171278
288 Ga0436365_1624267
289 Ga0436362_0263779
290 Ga0436362_0711124
291 Ga0466972_0065791
292 Ga0466965_0000955
293 Ga0466968_0002692
294 Ga0466960_0007998
295 Ga0495618_0031520
296 Ga0495620_0014695
297 Ga0495635_0034402
298 Ga0495613_0009817
299 Ga0495674_0054998
300 Ga0495684_0016983
301 Ga0495684_0220198
302 Ga0501034_0007882
303 Ga0501034_0033535
304 Ga0501037_0036999
305 Ga0501070_0192265
306 Ga0501083_0006170
307 Ga0501044_0011067
308 Ga0501044_0011689
309 nmdc:mga06r32_1687_c1
310 nmdc:mga06r32_40506_c1
311 nmdc:mga08y16_3009_c1
312 nmdc:mga08y16_75705_c1
313 nmdc:mga0n895_176286_c1
314 nmdc:mga0n895_195832_c1
315 nmdc:mga0rr50_22194_c1
316 Ga0501082_0142247

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13738

Pyr_redox_3

Pyridine nucleotide-disulphide oxidoreductase

37

349

0.86

PF13434

Lys_Orn_oxgnase

L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase

93

231

0.85

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

34

380

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
7a76-assembly1.cif.gz_C bacillithiol disulfide reductase bdr (ypda) from bacillus cereus 0.954 19 348
7a7b-assembly1.cif.gz_D bacillithiol disulfide reductase bdr (ypda) from staphylococcus aureus 0.942 19 347
7a76-assembly1.cif.gz_C bacillithiol disulfide reductase bdr (ypda) from bacillus cereus 0.9398 19 348
1vg0-assembly1.cif.gz_A the crystal structures of the rep-1 protein in complex with monoprenylated rab7 protein 0.9384 19 53
1vg9-assembly3.cif.gz_E the crystal structures of the rep-1 protein in complex with c-terminally truncated rab7 protein 0.9241 19 51
ID Description Score Start End Superfamily
4oqyB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9514 19 48 3.40.50.720
af_Q2FYF3_1_146_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9489 19 166 3.50.50.60
af_O60112_6_422_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9408 19 51 3.30.300.30
af_Q2FYF3_1_146_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9242 19 166 3.50.50.60
af_Q2FYF3_156_325_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9216 177 347 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A2E0UNU7-F1-model_v4 Pyridine nucleotide-disulfide oxidoreductase 0.9791 16 347 GO:0004497
GO:0050660
AF-A0A090D109-F1-model_v4 Putative thioredoxin reductase (EC 1.8.1.9) 0.9714 13 347 GO:0004497
GO:0004791
GO:0050660
AF-A0A7Y5LTN9-F1-model_v4 YpdA family putative bacillithiol disulfide reductase 0.9707 19 282 GO:0016491
AF-F8LD56-F1-model_v4 Uncharacterized protein ypdA (EC 1.8.1.9) 0.9697 16 350 GO:0004791
AF-A0A0D5BSF5-F1-model_v4 deleted 0.9676 17 345

Map