F230795

General Info

Members Datasets Scaffolds Average Seq Length
158 107 158 784

Family's Representative Sequence

Representative Sequence 3300053087|Ga0500643_000411|Ga0500643_000411_22750_25431
Length 893
Sequence MTTASQPPRAPKPLRKKKSDQRDPRRVVMGFVLISLLSLLVVAGLGAATLWHFSHDLPKIITPEDYRPLTVTQVLSHPAGKNGAAAPEAEVLGEFFKQRRYIVPYEKFPEVVVKAFISAEDDKFFEHPGINIMSLVRAAIANFRAGRVVQGGSTITQQVAKSFLYGNTLAERSFSRKIRELILTYRIEKNLNKKQILYLYLNQIYLGHGAYGAQSAARTYFRKDVGAISVAEAALMAGMNQAPGKYSPLLNPKRAKERQLYVLKRMLENGYITQAQYTEASAQPLRIFHDEDLNTQYAGYLVEHIRRYLVETYGEKAVYEDGLTVTVPTSRELSLAAHRSVRDGLEAVDKRIGYRGPIQQLTSNEEIEKFLKDLRLSLIERRVHFLMFMPDGHMDPEQAMKSANVNSEAQLLVTGEHYQAVVTSLDEKRKSIGVLIGGVKGEIPFSRMSWARRIKDEKTGERPREPKNVGDVVARGDVVWAKVLENSEKGLTLGLSQEPQVQGALFSIEASTGYVLAMEGGYNFDASEFNRATQAQRQPGSSFKPLIYSAALEKGFTPATIIVDSPIVYEDTESGKWKPANFEEKFYGDTTFRQALIKSRNVPTIKILQAIQVPYVIDYVKRLGMSAKFNNDLSISLGSTAMSLLEMTKVYAVFARLGRRVNPIFITQVRDRDGKVLEEQAPQVLPAVVKIPPLEEPADGEPVATASPAAPINESARRAPFHLPKYPPADDPDQILDPRVAFVMTHLMSEVVSYGTGHEAKNLGRPAAGKTGTTSDYIDALFIGYTPHVVTGSWVGFDNQKPIGPGETGARAALPIWLGYMKDAVKGYPETDFVVPPQVVFTSIDAATGKLAPANSSTAIREAFIEGTQPTEVVEPGRAKPASQGDFFKEDTE

Samples

Sample ID Description Type Environment
1 2740891818 Desulfofaba hansenii DSM 12642 Isolate Unclassified
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
16 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
28 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
34 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
43 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
44 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
47 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
48 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
68 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
69 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
70 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
71 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
72 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
73 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
74 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
75 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
76 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
77 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
78 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
79 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
80 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
81 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
82 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
83 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
84 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
85 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
86 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
87 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
88 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
89 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
90 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
91 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
92 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
93 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
94 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
95 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
96 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
97 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
98 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
99 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
102 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
103 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
104 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
105 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
106 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
107 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.37
Metatranscriptomes 0
Isolates 0.63

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.63
Nodule 0
Rhizoplane 0.63
Rhizosphere 96.2
Stem 0
Stem Tuber 0
Unclassified 2.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10004709 3300003316 Bacteria 5918
2 rootH1_10004709 3300003323 Bacteria 4056
3 Ga0070683_100034066 3300005329 Bacteria 4650
4 Ga0070670_100008469 3300005331 Bacteria 8772
5 Ga0068869_100001302 3300005334 Bacteria 14765
6 Ga0068868_100036825 3300005338 Unclassified 3790
7 Ga0070713_100005138 3300005436 Bacteria 8907
8 Ga0070713_100034362 3300005436 Bacteria 4072
9 Ga0070694_100001039 3300005444 Bacteria 15833
10 Ga0070681_10001481 3300005458 Bacteria 20738
11 Ga0068867_100008997 3300005459 Bacteria 7046
12 Ga0070698_100044189 3300005471 Bacteria 4564
13 Ga0070679_100002345 3300005530 Bacteria 17137
14 Ga0070684_100031633 3300005535 Bacteria 4507
15 Ga0070697_100000251 3300005536 Bacteria 43331
16 Ga0070697_100028180 3300005536 Bacteria 4496
17 Ga0070695_100002353 3300005545 Bacteria 10842
18 Ga0070704_100001884 3300005549 Bacteria 11561
19 Ga0068855_100000477 3300005563 Bacteria 49253
20 Ga0068855_100000664 3300005563 Bacteria 41988
21 Ga0068855_100018154 3300005563 Bacteria 8452
22 Ga0068855_100022920 3300005563 Bacteria 7483
23 Ga0070664_100000304 3300005564 Bacteria 35664
24 Ga0068857_100008491 3300005577 Bacteria 8879
25 Ga0068856_100000334 3300005614 Bacteria 51590
26 Ga0068856_100000667 3300005614 Bacteria 37242
27 Ga0068856_100001991 3300005614 Bacteria 21304
28 Ga0068852_100086750 3300005616 Bacteria 2791
29 Ga0068864_100056061 3300005618 Bacteria 3405
30 Ga0068866_10001555 3300005718 Bacteria 9752
31 Ga0068858_100002276 3300005842 Bacteria 19421
32 Ga0068858_100003363 3300005842 Bacteria 15926
33 Ga0068860_100008186 3300005843 Bacteria 10409
34 Ga0070717_10003481 3300006028 Bacteria 11275
35 Ga0070712_100005156 3300006175 Bacteria 8083
36 Ga0097621_100000153 3300006237 Bacteria 42702
37 Ga0097621_100000992 3300006237 Bacteria 19954
38 Ga0068871_100000712 3300006358 Bacteria 22517
39 Ga0068871_100000931 3300006358 Bacteria 19542
40 Ga0068871_100003738 3300006358 Bacteria 10476
41 Ga0075428_100004107 3300006844 Bacteria 16022
42 Ga0075428_100093956 3300006844 Bacteria 3270
43 Ga0075430_100008615 3300006846 Bacteria 8606
44 Ga0075431_100002338 3300006847 Bacteria 18203
45 Ga0075433_10009927 3300006852 Bacteria 7630
46 Ga0099794_10000602 3300007265 Bacteria 12042
47 Ga0105240_10018360 3300009093 Bacteria 9394
48 Ga0105240_10027885 3300009093 Bacteria 7388
49 Ga0111539_10027407 3300009094 Bacteria 6959
50 Ga0114129_10001538 3300009147 Bacteria 31281
51 Ga0114129_10029883 3300009147 Bacteria 7717
52 Ga0105237_10017009 3300009545 Bacteria 7548
53 Ga0105237_10030922 3300009545 Bacteria 5432
54 Ga0105238_10000219 3300009551 Bacteria 63043
55 Ga0105239_10006762 3300010375 Bacteria 13239
56 Ga0157369_10000565 3300013105 Bacteria 48680
57 Ga0157374_10000280 3300013296 Bacteria 47309
58 Ga0157374_10000702 3300013296 Bacteria 29423
59 Ga0157374_10001978 3300013296 Bacteria 17189
60 Ga0157374_10002230 3300013296 Bacteria 16325
61 Ga0157378_10000157 3300013297 Bacteria 64384
62 Ga0157378_10000229 3300013297 Bacteria 54489
63 Ga0157378_10015156 3300013297 Bacteria 6749
64 Ga0163162_10069622 3300013306 Unclassified 3570
65 Ga0157372_10001179 3300013307 Bacteria 28254
66 Ga0157372_10002008 3300013307 Bacteria 22106
67 Ga0157372_10005577 3300013307 Bacteria 13378
68 Ga0157372_10065618 3300013307 Bacteria 4076
69 Ga0157372_10070218 3300013307 Unclassified 3940
70 Ga0157376_10011632 3300014969 Bacteria 6495
71 Ga0157376_10044188 3300014969 Unclassified 3661
72 Ga0228598_1002635 3300024227 Unclassified 3892
73 Ga0207642_10001754 3300025899 Bacteria 6700
74 Ga0207647_10007270 3300025904 Bacteria 8012
75 Ga0207707_10000681 3300025912 Bacteria 33712
76 Ga0207671_10028058 3300025914 Unclassified 4207
77 Ga0207652_10024515 3300025921 Bacteria 5006
78 Ga0207694_10001905 3300025924 Bacteria 17287
79 Ga0207664_10102805 3300025929 Bacteria 2363
80 Ga0207689_10000707 3300025942 Bacteria 31997
81 Ga0207679_10000789 3300025945 Bacteria 20715
82 Ga0207667_10000764 3300025949 Bacteria 41822
83 Ga0207667_10032779 3300025949 Bacteria 5593
84 Ga0207667_10079107 3300025949 Bacteria 3407
85 Ga0207677_10006176 3300026023 Bacteria 6546
86 Ga0207703_10013053 3300026035 Bacteria 6474
87 Ga0207703_10013893 3300026035 Bacteria 6277
88 Ga0207703_10032758 3300026035 Unclassified 4114
89 Ga0207702_10001773 3300026078 Bacteria 21236
90 Ga0207702_10013402 3300026078 Bacteria 6817
91 Ga0207648_10009875 3300026089 Bacteria 9097
92 Ga0207676_10002632 3300026095 Bacteria 12794
93 Ga0207674_10003318 3300026116 Bacteria 19788
94 Ga0207674_10026637 3300026116 Bacteria 6134
95 Ga0209588_1002215 3300027671 Bacteria 5250
96 Ga0268266_10024970 3300028379 Bacteria 5086
97 Ga0268264_10026158 3300028381 Bacteria 4766
98 Ga0265334_10004046 3300028573 Bacteria 6576
99 Ga0265318_10000183 3300028577 Bacteria 55325
100 Ga0265330_10013682 3300031235 Bacteria 3776
101 Ga0265329_10000391 3300031242 Bacteria 23179
102 Ga0265331_10000874 3300031250 Bacteria 24580
103 Ga0265316_10002622 3300031344 Bacteria 18535
104 Ga0316575_10021150 3300031665 Bacteria 2502
105 Ga0265342_10001059 3300031712 Bacteria 26880
106 Ga0316578_10010876 3300031728 Bacteria 4741
107 Ga0307410_10028507 3300031852 Bacteria 3543
108 Ga0307409_100034587 3300031995 Bacteria 3692
109 Ga0373931_0055070 3300035691 Unclassified 2127
110 Ga0373927_0010730 3300035695 Bacteria 6103
111 Ga0316584_0002114 3300036712 Bacteria 12430
112 Ga0395905_0000145 3300037471 Bacteria 116795
113 Ga0395905_0004489 3300037471 Bacteria 14475
114 Ga0400483_154187 3300039062 Bacteria 6160
115 Ga0400483_198875 3300039062 Bacteria 2280
116 Ga0451577_0000014 3300042876 Bacteria 546755
117 Ga0451577_0003786 3300042876 Bacteria 16467
118 Ga0451577_0011270 3300042876 Bacteria 8469
119 Ga0451577_0039963 3300042876 Bacteria 4212
120 Ga0453683_0000266 3300044673 Bacteria 68566
121 Ga0453683_0002008 3300044673 Bacteria 16426
122 Ga0453683_0006403 3300044673 Bacteria 8080
123 Ga0466961_0039244 3300044693 Unclassified 3036
124 Ga0453684_0000571 3300044712 Bacteria 137625
125 Ga0453684_0001289 3300044712 Bacteria 74584
126 Ga0453684_0001409 3300044712 Bacteria 69354
127 Ga0453684_0002978 3300044712 Bacteria 39560
128 Ga0453684_0006608 3300044712 Bacteria 21931
129 Ga0453684_0008345 3300044712 Bacteria 18622
130 Ga0453684_0038671 3300044712 Bacteria 6516
131 Ga0453684_0083790 3300044712 Bacteria 3967
132 Ga0453684_0114604 3300044712 Bacteria 3267
133 Ga0453684_0117119 3300044712 Bacteria 3224
134 Ga0453684_0145619 3300044712 Bacteria 2822
135 Ga0451576_0002669 3300045051 Bacteria 25982
136 Ga0451576_0007975 3300045051 Bacteria 12522
137 Ga0451576_0055046 3300045051 Bacteria 4163
138 Ga0495629_0000002 3300046459 Bacteria 686975
139 Ga0495580_0038723 3300046472 Bacteria 3413
140 Ga0495639_0000455 3300046475 Bacteria 19402
141 Ga0495594_0008670 3300046499 Bacteria 5241
142 Ga0495586_0000936 3300046535 Bacteria 16565
143 Ga0495598_0000222 3300046537 Bacteria 10045
144 Ga0495656_0000102 3300046615 Bacteria 35387
145 Ga0495600_0007373 3300046809 Bacteria 6726
146 Ga0495581_0007438 3300047315 Bacteria 6334
147 Ga0495676_0016998 3300047321 Bacteria 6441
148 Ga0496112_0005998 3300048915 Bacteria 10604
149 Ga0501034_0000441 3300049571 Bacteria 68583
150 Ga0501048_0037733 3300049582 Bacteria 3470
151 Ga0501067_0010930 3300049583 Bacteria 5025
152 Ga0501045_0039056 3300049824 Bacteria 3454
153 nmdc:mga05p37_135447_c1 3300050507 Bacteria 3021
154 nmdc:mga0a205_15042_c1 3300050515 Bacteria 7223
155 Ga0495619_0009505 3300053085 Bacteria 6134
156 Ga0500643_000411 3300053087 Bacteria 32710
157 Ga0530510_0009247 3300061734 Bacteria 6911
158 Ga0530510_0060161 3300061734 Bacteria 2749

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300035691 Ga0373931_0055070 Ga0373931_0055070_66_2054 640
2 3300028379 Ga0268266_10024970 Ga0268266_100249702 668
3 3300039062 Ga0400483_198875 Ga0400483_198875_58_2259 677
4 3300044712 Ga0453684_0145619 Ga0453684_0145619_18_2513 684
5 3300046472 Ga0495580_0038723 Ga0495580_0038723_346_2529 700
6 3300046499 Ga0495594_0008670 Ga0495594_0008670_2807_4990 700
7 3300005334 Ga0068869_100001302 Ga0068869_1000013026 701
8 3300005842 Ga0068858_100002276 Ga0068858_10000227611 701
9 3300009545 Ga0105237_10030922 Ga0105237_100309222 701
10 3300013296 Ga0157374_10001978 Ga0157374_100019782 701
11 3300013306 Ga0163162_10069622 Ga0163162_100696223 701
12 3300014969 Ga0157376_10044188 Ga0157376_100441882 701
13 3300025904 Ga0207647_10007270 Ga0207647_100072702 701
14 3300025914 Ga0207671_10028058 Ga0207671_100280582 701
15 3300025942 Ga0207689_10000707 Ga0207689_100007076 701
16 3300026035 Ga0207703_10013893 Ga0207703_100138936 701
17 3300028381 Ga0268264_10026158 Ga0268264_100261583 701
18 3300046809 Ga0495600_0007373 Ga0495600_0007373_1834_4539 702
19 3300053085 Ga0495619_0009505 Ga0495619_0009505_851_3556 702
20 3300048915 Ga0496112_0005998 Ga0496112_0005998_1175_3403 703
21 3300005329 Ga0070683_100034066 Ga0070683_1000340661 704
22 3300005331 Ga0070670_100008469 Ga0070670_1000084696 704
23 3300005338 Ga0068868_100036825 Ga0068868_1000368252 704
24 3300005436 Ga0070713_100005138 Ga0070713_1000051388 704
25 3300005436 Ga0070713_100034362 Ga0070713_1000343621 704
26 3300005458 Ga0070681_10001481 Ga0070681_100014811 704
27 3300005459 Ga0068867_100008997 Ga0068867_1000089976 704
28 3300005530 Ga0070679_100002345 Ga0070679_10000234515 704
29 3300005535 Ga0070684_100031633 Ga0070684_1000316332 704
30 3300005563 Ga0068855_100000477 Ga0068855_10000047721 704
31 3300005563 Ga0068855_100000664 Ga0068855_10000066426 704
32 3300005563 Ga0068855_100018154 Ga0068855_1000181544 704
33 3300005563 Ga0068855_100022920 Ga0068855_1000229201 704
34 3300005564 Ga0070664_100000304 Ga0070664_10000030424 704
35 3300005577 Ga0068857_100008491 Ga0068857_1000084914 704
36 3300005614 Ga0068856_100000334 Ga0068856_1000003349 704
37 3300005614 Ga0068856_100000667 Ga0068856_10000066718 704
38 3300005614 Ga0068856_100001991 Ga0068856_1000019911 704
39 3300005616 Ga0068852_100086750 Ga0068852_1000867502 704
40 3300005718 Ga0068866_10001555 Ga0068866_100015556 704
41 3300005842 Ga0068858_100003363 Ga0068858_10000336311 704
42 3300005843 Ga0068860_100008186 Ga0068860_1000081862 704
43 3300006028 Ga0070717_10003481 Ga0070717_100034811 704
44 3300006175 Ga0070712_100005156 Ga0070712_1000051563 704
45 3300006237 Ga0097621_100000153 Ga0097621_10000015336 704
46 3300006237 Ga0097621_100000992 Ga0097621_10000099211 704
47 3300006358 Ga0068871_100000712 Ga0068871_10000071214 704
48 3300006358 Ga0068871_100000931 Ga0068871_10000093118 704
49 3300006358 Ga0068871_100003738 Ga0068871_1000037382 704
50 3300009093 Ga0105240_10018360 Ga0105240_100183607 704
51 3300009093 Ga0105240_10027885 Ga0105240_100278852 704
52 3300009545 Ga0105237_10017009 Ga0105237_100170095 704
53 3300009551 Ga0105238_10000219 Ga0105238_1000021921 704
54 3300013105 Ga0157369_10000565 Ga0157369_1000056522 704
55 3300013296 Ga0157374_10000280 Ga0157374_1000028020 704
56 3300013296 Ga0157374_10000702 Ga0157374_1000070224 704
57 3300013296 Ga0157374_10002230 Ga0157374_100022303 704
58 3300013297 Ga0157378_10000229 Ga0157378_1000022910 704
59 3300013297 Ga0157378_10015156 Ga0157378_100151562 704
60 3300013307 Ga0157372_10001179 Ga0157372_1000117910 704
61 3300013307 Ga0157372_10002008 Ga0157372_1000200816 704
62 3300013307 Ga0157372_10005577 Ga0157372_1000557710 704
63 3300013307 Ga0157372_10065618 Ga0157372_100656184 704
64 3300013307 Ga0157372_10070218 Ga0157372_100702183 704
65 3300014969 Ga0157376_10011632 Ga0157376_100116322 704
66 3300024227 Ga0228598_1002635 Ga0228598_10026352 704
67 3300025899 Ga0207642_10001754 Ga0207642_100017543 704
68 3300025912 Ga0207707_10000681 Ga0207707_100006812 704
69 3300025921 Ga0207652_10024515 Ga0207652_100245152 704
70 3300025924 Ga0207694_10001905 Ga0207694_1000190517 704
71 3300025929 Ga0207664_10102805 Ga0207664_101028051 704
72 3300025945 Ga0207679_10000789 Ga0207679_1000078910 704
73 3300025949 Ga0207667_10000764 Ga0207667_1000076413 704
74 3300025949 Ga0207667_10032779 Ga0207667_100327793 704
75 3300025949 Ga0207667_10079107 Ga0207667_100791071 704
76 3300026023 Ga0207677_10006176 Ga0207677_100061762 704
77 3300026035 Ga0207703_10013053 Ga0207703_100130532 704
78 3300026035 Ga0207703_10032758 Ga0207703_100327584 704
79 3300026078 Ga0207702_10001773 Ga0207702_1000177312 704
80 3300026078 Ga0207702_10013402 Ga0207702_100134022 704
81 3300026089 Ga0207648_10009875 Ga0207648_1000987510 704
82 3300026095 Ga0207676_10002632 Ga0207676_100026325 704
83 3300026116 Ga0207674_10003318 Ga0207674_1000331817 704
84 3300026116 Ga0207674_10026637 Ga0207674_100266374 704
85 3300044693 Ga0466961_0039244 Ga0466961_0039244_242_2473 704
86 3300035695 Ga0373927_0010730 Ga0373927_0010730_1852_4089 706
87 3300005536 Ga0070697_100000251 Ga0070697_10000025121 716
88 3300013297 Ga0157378_10000157 Ga0157378_1000015721 721
89 3300061734 Ga0530510_0009247 Ga0530510_0009247_4118_6703 722
90 3300044712 Ga0453684_0002978 Ga0453684_0002978_13766_16387 723
91 3300006846 Ga0075430_100008615 Ga0075430_1000086153 725
92 3300006844 Ga0075428_100004107 Ga0075428_1000041075 726
93 3300044673 Ga0453683_0002008 Ga0453683_0002008_2411_5089 727
94 3300006852 Ga0075433_10009927 Ga0075433_100099274 728
95 3300009147 Ga0114129_10001538 Ga0114129_1000153829 728
96 3300050507 nmdc:mga05p37_135447_c1 nmdc:mga05p37_135447_c1_355_2889 728
97 3300050515 nmdc:mga0a205_15042_c1 nmdc:mga0a205_15042_c1_1714_4248 728
98 3300005444 Ga0070694_100001039 Ga0070694_10000103910 729
99 3300005545 Ga0070695_100002353 Ga0070695_1000023532 729
100 3300006847 Ga0075431_100002338 Ga0075431_1000023385 729
101 3300009147 Ga0114129_10029883 Ga0114129_100298835 729
102 3300042876 Ga0451577_0039963 Ga0451577_0039963_582_3233 729
103 3300042876 Ga0451577_0011270 Ga0451577_0011270_374_3061 731
104 3300044712 Ga0453684_0006608 Ga0453684_0006608_4809_7226 731
105 3300046475 Ga0495639_0000455 Ga0495639_0000455_11164_13899 731
106 3300046535 Ga0495586_0000936 Ga0495586_0000936_12863_15598 731
107 3300047315 Ga0495581_0007438 Ga0495581_0007438_2915_5650 731
108 3300047321 Ga0495676_0016998 Ga0495676_0016998_3171_5906 731
109 3300005549 Ga0070704_100001884 Ga0070704_1000018845 733
110 3300009094 Ga0111539_10027407 Ga0111539_100274072 733
111 3300031852 Ga0307410_10028507 Ga0307410_100285071 733
112 3300031995 Ga0307409_100034587 Ga0307409_1000345872 733
113 3300046459 Ga0495629_0000002 Ga0495629_0000002_53528_56191 733
114 3300049582 Ga0501048_0037733 Ga0501048_0037733_502_3075 734
115 3300049824 Ga0501045_0039056 Ga0501045_0039056_143_2716 734
116 3300061734 Ga0530510_0060161 Ga0530510_0060161_108_2681 734
117 3300007265 Ga0099794_10000602 Ga0099794_1000060214 735
118 3300027671 Ga0209588_1002215 Ga0209588_10022152 735
119 3300042876 Ga0451577_0003786 Ga0451577_0003786_11764_14187 735
120 3300044673 Ga0453683_0000266 Ga0453683_0000266_31027_33708 738
121 3300044712 Ga0453684_0001289 Ga0453684_0001289_41608_44289 738
122 3300044712 Ga0453684_0083790 Ga0453684_0083790_631_3306 738
123 3300045051 Ga0451576_0002669 Ga0451576_0002669_16379_19060 738
124 3300045051 Ga0451576_0055046 Ga0451576_0055046_1006_3693 738
125 3300031665 Ga0316575_10021150 Ga0316575_100211501 739
126 3300005618 Ga0068864_100056061 Ga0068864_1000560612 740
127 iso_pu_bacteria 2740891818 2740994594 740
128 3300005536 Ga0070697_100028180 Ga0070697_1000281804 741
129 3300006844 Ga0075428_100093956 Ga0075428_1000939562 741
130 3300031728 Ga0316578_10010876 Ga0316578_100108763 744
131 3300036712 Ga0316584_0002114 Ga0316584_0002114_7604_10006 744
132 3300049571 Ga0501034_0000441 Ga0501034_0000441_62153_64777 746
133 3300005471 Ga0070698_100044189 Ga0070698_1000441892 747
134 3300037471 Ga0395905_0000145 Ga0395905_0000145_8630_11275 748
135 3300037471 Ga0395905_0004489 Ga0395905_0004489_4694_7315 748
136 3300044712 Ga0453684_0001409 Ga0453684_0001409_44567_47284 748
137 3300053087 Ga0500643_000411 Ga0500643_000411_22750_25431 748
138 3300039062 Ga0400483_154187 Ga0400483_154187_1971_4325 751
139 3300046537 Ga0495598_0000222 Ga0495598_0000222_5069_7780 751
140 3300044712 Ga0453684_0008345 Ga0453684_0008345_4755_7442 752
141 3300044712 Ga0453684_0038671 Ga0453684_0038671_3456_6098 752
142 3300044712 Ga0453684_0114604 Ga0453684_0114604_200_2887 753
143 3300042876 Ga0451577_0000014 Ga0451577_0000014_441042_443717 755
144 3300044673 Ga0453683_0006403 Ga0453683_0006403_4017_6692 755
145 3300044712 Ga0453684_0000571 Ga0453684_0000571_31490_34165 755
146 3300044712 Ga0453684_0117119 Ga0453684_0117119_401_3094 755
147 3300045051 Ga0451576_0007975 Ga0451576_0007975_3098_5791 755
148 3300046615 Ga0495656_0000102 Ga0495656_0000102_19479_22157 766
149 3300010375 Ga0105239_10006762 Ga0105239_100067624 767
150 3300049583 Ga0501067_0010930 Ga0501067_0010930_1950_4301 776
151 3300028573 Ga0265334_10004046 Ga0265334_100040466 780
152 3300028577 Ga0265318_10000183 Ga0265318_1000018326 780
153 3300031235 Ga0265330_10013682 Ga0265330_100136822 780
154 3300031242 Ga0265329_10000391 Ga0265329_1000039117 780
155 3300031250 Ga0265331_10000874 Ga0265331_100008746 780
156 3300031344 Ga0265316_10002622 Ga0265316_100026227 780
157 3300031712 Ga0265342_10001059 Ga0265342_100010591 780
158 3300003323 rootH1_10004709 rootH1_100047093 782

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00912

Transgly

Transglycosylase

88

267

0.95

PF00905

Transpeptidase

Penicillin binding protein transpeptidase domain

503

802

0.91

PF17092

PCB_OB

Penicillin-binding protein OB-like domain

390

501

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
3d3h-assembly1.cif.gz_A-2 crystal structure of a complex of the peptidoglycan glycosyltransferase domain from aquifex aeolicus and neryl moenomycin a 0.9692 65 243
3nb7-assembly1.cif.gz_A-2 crystal structure of aquifex aeolicus peptidoglycan glycosyltransferase in complex with decarboxylated neryl moenomycin 0.9577 61 243
2oqo-assembly1.cif.gz_A-2 crystal structure of a peptidoglycan glycosyltransferase from a class a pbp: insight into bacterial cell wall synthesis 0.9569 60 243
3nb6-assembly1.cif.gz_A-2 crystal structure of aquifex aeolicus peptidoglycan glycosyltransferase in complex with methylphosphoryl neryl moenomycin 0.9566 63 243
3d3h-assembly1.cif.gz_A-2 crystal structure of a complex of the peptidoglycan glycosyltransferase domain from aquifex aeolicus and neryl moenomycin a 0.9421 65 243
ID Description Score Start End Superfamily
3d3hA00 Mainly Alpha;Orthogonal Bundle;Penicillin binding protein transpeptidase fold;Biosynthetic peptidoglycan transglycosylase-like 0.9692 65 243 1.10.3810.10
3d3hA00 Mainly Alpha;Orthogonal Bundle;Penicillin binding protein transpeptidase fold;Biosynthetic peptidoglycan transglycosylase-like 0.9421 65 243 1.10.3810.10
af_P76577_56_250_1.10.3810.10 Mainly Alpha;Orthogonal Bundle;Penicillin binding protein transpeptidase fold;Biosynthetic peptidoglycan transglycosylase-like 0.9352 63 252 1.10.3810.10
af_Q2FXJ4_86_294_1.10.3810.10 Mainly Alpha;Orthogonal Bundle;Penicillin binding protein transpeptidase fold;Biosynthetic peptidoglycan transglycosylase-like 0.9258 71 247 1.10.3810.10
af_P71707_174_375_1.10.3810.10 Mainly Alpha;Orthogonal Bundle;Penicillin binding protein transpeptidase fold;Biosynthetic peptidoglycan transglycosylase-like 0.922 64 241 1.10.3810.10
ID Description Score Start End GO Terms
AF-A0A2S7ZQ17-F1-model_v4 peptidoglycan glycosyltransferase (EC 2.4.99.28) 0.9645 67 251 GO:0008955
GO:0009252
GO:0030288
AF-A0A528NW83-F1-model_v4 deleted 0.9623 89 224
AF-A0A316S4L2-F1-model_v4 deleted 0.957 67 243
AF-K1SV39-F1-model_v4 peptidoglycan glycosyltransferase (EC 2.4.99.28) 0.9531 71 251 GO:0008955
GO:0009252
GO:0030288
AF-A0A2G5DVS3-F1-model_v4 Glycosyl transferase family 51 domain-containing protein 0.9476 71 250 GO:0008955
GO:0016020

Feature Viewer

pLDDT pTM Quality
83.13 0.76 High
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Predicted Structure (AlphaFold2)

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