F232425

General Info

Members Datasets Scaffolds Average Seq Length
159 122 318 414

Family's Representative Sequence

Representative Sequence 3300028379|Ga0268266_10013670|Ga0268266_100136709
Length 449
Sequence MDLERIIKPSLSAATNSLADSFDVLTVRRDFSALDQTVHGHPLVYLDNAATAQKPRCVIESLRQFYEADCANIHRGVHDLSERATTAYEDARSKVRHFINAGKHEEVVFVRGTTEAINLVAATWGRKNLHRGDEIIISTLDHHSNIVPWQILCEETGAVLRWIPINDRGELVLDEYEKLLGPRTRIVAVAHVSNTLGTITPIRRIIEMAHQVGAVALVDGAQAAPHTRIDVRALDADFYAFSGHKVFGPTGIGVLYGKYELLRSIPPYESGGGMIRSVSCAKTTYLDPPCKFEAGTPNIAGAIGLGAALDYVGKIGIDEIAAYEHRLLLHGTSALSAVPGLRIIGTPAEQAAVLPFVIGDIDPAEIGTMLDLQGIAVRTGQHCAQPVMARFGLSGTVRASFAFYNTMAEIDALADGLGRITTMFRDIVVSAHAQRSARCALAVRVESVR

Samples

Sample ID Description Type Environment
1 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
6 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
8 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
39 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
52 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
53 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
73 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
74 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
75 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
76 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
77 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
78 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
79 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
80 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
81 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
82 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
83 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
84 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
85 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
86 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
87 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
88 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
89 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
90 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
91 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
92 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
93 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
94 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
95 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
96 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
97 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
98 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
99 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
100 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
101 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
102 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
103 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
104 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
105 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
106 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
107 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
108 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
109 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
110 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
111 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
112 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
113 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
114 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
115 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
116 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
117 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
118 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
119 2833640130 Mariniflexile sp. TRM1-10 Isolate Rhizosphere
120 2881955468 Edaphocola flava HME-24 Isolate Rhizosphere
121 2916178963 Pseudoalteromonas rhizosphaerae RA15 Isolate Rhizosphere
122 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.48
Metatranscriptomes 0
Isolates 2.52

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.66
Nodule 0
Rhizoplane 6.92
Rhizosphere 84.91
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0268266_10013670 3300028379 Bacteria 6990
2 JGI24740J21852_10029855 3300001979 Bacteria 1784
3 rootL2_10023730 3300003322 Bacteria 1651
4 rootL2_10098889 3300003322 Bacteria 4310
5 rootH1_10032533 3300003323 Bacteria 18080
6 JGI25160J50197_1009679 3300003354 Bacteria 3551
7 Ga0065714_10011716 3300005288 Bacteria 3064
8 Ga0065712_10068958 3300005290 Bacteria 8464
9 Ga0065712_10093146 3300005290 Bacteria 2304
10 Ga0065715_10000604 3300005293 Bacteria 10117
11 Ga0065715_10004746 3300005293 Bacteria 5208
12 Ga0070683_100000395 3300005329 Bacteria 30161
13 Ga0070670_100001063 3300005331 Bacteria 21793
14 Ga0070670_100037573 3300005331 Bacteria 4166
15 Ga0070661_100040963 3300005344 Bacteria 3379
16 Ga0070668_100121539 3300005347 Bacteria 2088
17 Ga0070669_100132501 3300005353 Bacteria 1914
18 Ga0070675_100007855 3300005354 Bacteria 8268
19 Ga0070673_100135283 3300005364 Bacteria 2074
20 Ga0070688_100003764 3300005365 Bacteria 7861
21 Ga0070667_100287730 3300005367 Bacteria 1477
22 Ga0070663_100087712 3300005455 Bacteria 2300
23 Ga0070685_10014595 3300005466 Bacteria 4163
24 Ga0070706_100049648 3300005467 Bacteria 3871
25 Ga0070684_100010724 3300005535 Bacteria 7273
26 Ga0070697_100163762 3300005536 Bacteria 1880
27 Ga0068853_100128113 3300005539 Bacteria 2269
28 Ga0070672_100045042 3300005543 Bacteria 3410
29 Ga0070665_100015837 3300005548 Bacteria 7570
30 Ga0068855_100156481 3300005563 Bacteria 2589
31 Ga0070664_100007179 3300005564 Bacteria 8982
32 Ga0070664_100015481 3300005564 Bacteria 6239
33 Ga0068856_100028576 3300005614 Bacteria 5446
34 Ga0068859_100120342 3300005617 Bacteria 2692
35 Ga0068863_100017209 3300005841 Bacteria 6933
36 Ga0068863_100044718 3300005841 Bacteria 4202
37 Ga0068860_100020477 3300005843 Bacteria 6406
38 Ga0068862_100278774 3300005844 Bacteria 1531
39 Ga0070717_10018997 3300006028 Bacteria 5382
40 Ga0075366_10117859 3300006195 Bacteria 1599
41 Ga0075433_10102174 3300006852 Bacteria 2539
42 Ga0097620_100120340 3300006931 Bacteria 2692
43 Ga0075435_100140088 3300007076 Bacteria 2029
44 Ga0105243_10072300 3300009148 Bacteria 2791
45 Ga0105242_10128972 3300009176 Bacteria 2180
46 Ga0105248_10173930 3300009177 Bacteria 2427
47 Ga0105248_10249185 3300009177 Bacteria 1999
48 Ga0105237_10003180 3300009545 Bacteria 19703
49 Ga0105249_10005179 3300009553 Bacteria 11251
50 Ga0105239_10215838 3300010375 Bacteria 2151
51 Ga0157371_10029306 3300013102 Bacteria 3982
52 Ga0157370_10154148 3300013104 Bacteria 2138
53 Ga0157369_10001033 3300013105 Bacteria 35163
54 Ga0157374_10027275 3300013296 Bacteria 5149
55 Ga0163162_10024771 3300013306 Bacteria 5927
56 Ga0163162_10055223 3300013306 Bacteria 3997
57 Ga0157372_10000016 3300013307 Bacteria 220177
58 Ga0157372_10002580 3300013307 Bacteria 19628
59 Ga0157372_10072843 3300013307 Bacteria 3871
60 Ga0163163_10045398 3300014325 Bacteria 4312
61 Ga0163163_10184523 3300014325 Bacteria 2134
62 Ga0163161_10112685 3300017792 Bacteria 2035
63 Ga0207426_1000019 3300025302 Bacteria 558579
64 Ga0207697_10023003 3300025315 Bacteria 2552
65 Ga0207684_10045814 3300025910 Bacteria 3709
66 Ga0207695_10062807 3300025913 Bacteria 3832
67 Ga0207649_10022996 3300025920 Bacteria 3605
68 Ga0207646_10014891 3300025922 Bacteria 7367
69 Ga0207681_10034568 3300025923 Bacteria 3325
70 Ga0207694_10074401 3300025924 Bacteria 2659
71 Ga0207650_10146510 3300025925 Bacteria 1860
72 Ga0207659_10017930 3300025926 Bacteria 4633
73 Ga0207659_10043485 3300025926 Bacteria 3155
74 Ga0207669_10069678 3300025937 Bacteria 2202
75 Ga0207689_10063976 3300025942 Bacteria 3027
76 Ga0207661_10001442 3300025944 Bacteria 16036
77 Ga0207679_10027025 3300025945 Bacteria 3964
78 Ga0207667_10178081 3300025949 Bacteria 2184
79 Ga0207703_10261399 3300026035 Bacteria 1565
80 Ga0207678_10038772 3300026067 Bacteria 4138
81 Ga0207702_10023338 3300026078 Bacteria 5130
82 Ga0207641_10010705 3300026088 Bacteria 7522
83 Ga0207641_10017608 3300026088 Bacteria 5850
84 Ga0207676_10046332 3300026095 Bacteria 3364
85 Ga0207676_10320464 3300026095 Bacteria 1423
86 Ga0268266_10016197 3300028379 Bacteria 6374
87 Ga0265338_10002502 3300028800 Bacteria 27371
88 Ga0265338_10005519 3300028800 Bacteria 16487
89 Ga0265324_10005863 3300029957 Bacteria 5224
90 Ga0265324_10015051 3300029957 Bacteria 2849
91 Ga0265339_10008800 3300031249 Bacteria 6393
92 Ga0265316_10000989 3300031344 Bacteria 30846
93 Ga0265316_10109255 3300031344 Bacteria 2096
94 Ga0307408_100000154 3300031548 Bacteria 76673
95 Ga0265342_10062250 3300031712 Bacteria 2197
96 Ga0307414_10000349 3300032004 Bacteria 25834
97 Ga0307411_10013543 3300032005 Bacteria 4503
98 Ga0307411_10115182 3300032005 Bacteria 1933
99 Ga0316574_0083584 3300035398 Bacteria 2030
100 Ga0395899_0000414 3300037312 Bacteria 49488
101 Ga0395901_0013582 3300038443 Bacteria 8282
102 Ga0451837_0810045 3300041494 Bacteria 2086
103 Ga0451577_0000066 3300042876 Bacteria 257650
104 Ga0451577_0001396 3300042876 Bacteria 32348
105 Ga0451577_0004990 3300042876 Bacteria 13754
106 Ga0451577_0049492 3300042876 Bacteria 3753
107 Ga0451577_0049738 3300042876 Bacteria 3742
108 Ga0453683_0000174 3300044673 Bacteria 89378
109 Ga0466966_0035359 3300044684 Bacteria 3227
110 Ga0453684_0000051 3300044712 Bacteria 551033
111 Ga0453684_0000206 3300044712 Bacteria 257650
112 Ga0453684_0000558 3300044712 Bacteria 140560
113 Ga0453684_0000970 3300044712 Bacteria 94484
114 Ga0453684_0004658 3300044712 Bacteria 28488
115 Ga0453684_0014290 3300044712 Bacteria 12727
116 Ga0453684_0092328 3300044712 Bacteria 3733
117 Ga0453684_0135341 3300044712 Bacteria 2951
118 Ga0451576_0000002 3300045051 Bacteria 1670975
119 Ga0451576_0000072 3300045051 Bacteria 257650
120 Ga0451576_0000442 3300045051 Bacteria 94498
121 Ga0451576_0040505 3300045051 Bacteria 4929
122 Ga0495594_0058338 3300046499 Bacteria 2132
123 Ga0495618_0007472 3300046514 Bacteria 6611
124 Ga0495628_0115446 3300046516 Bacteria 2062
125 Ga0495630_0008925 3300046517 Bacteria 7196
126 Ga0495666_0004554 3300046526 Bacteria 7004
127 Ga0495668_0000068 3300046616 Bacteria 176297
128 Ga0495634_0003518 3300046642 Bacteria 12547
129 Ga0495588_0076479 3300046674 Bacteria 1745
130 Ga0495658_0144627 3300046683 Bacteria 1456
131 Ga0495674_0030082 3300047319 Bacteria 4941
132 Ga0495680_0009004 3300047322 Bacteria 9018
133 Ga0495686_0000335 3300047472 Bacteria 77634
134 Ga0496101_0024519 3300048904 Bacteria 4175
135 Ga0496104_0013022 3300048907 Bacteria 7490
136 Ga0496105_0021098 3300048908 Bacteria 5268
137 Ga0496108_0001262 3300048911 Bacteria 19796
138 Ga0496109_0000421 3300048912 Bacteria 37279
139 Ga0496110_0019957 3300048913 Bacteria 5650
140 Ga0496110_0034895 3300048913 Bacteria 4360
141 Ga0496110_0106515 3300048913 Bacteria 2516
142 Ga0496112_0001306 3300048915 Bacteria 18933
143 Ga0496112_0005903 3300048915 Bacteria 10674
144 Ga0496113_0034911 3300048916 Bacteria 3673
145 Ga0501077_0064466 3300049593 Bacteria 2324
146 Ga0501241_003523 3300049758 Bacteria 2956
147 nmdc:mga0k408_112987_c1 3300050493 Bacteria 1606
148 nmdc:mga0rr50_128072_c1 3300050513 Bacteria 2029
149 nmdc:mga0a205_54083_c1 3300050515 Bacteria 3876
150 Ga0500555_000415 3300053103 Bacteria 17833
151 Ga0500562_000184 3300053108 Bacteria 16842
152 Ga0500616_0000616 3300053153 Bacteria 43214
153 Ga0500616_0001059 3300053153 Bacteria 28979
154 Ga0500645_000244 3300053730 Bacteria 40643
155 Ga0590075_024280 3300059424 Bacteria 1521
156 2833641387 2833640130 Bacteria 4858325
157 2881958370 2881955468 Bacteria 3545609
158 2916180613 2916178963 Bacteria 5265078
159 2919442035 2919437846 Bacteria 6199444
160 Ga0268266_10013670
161 JGI24740J21852_10029855
162 rootL2_10023730
163 rootL2_10098889
164 rootH1_10032533
165 JGI25160J50197_1009679
166 Ga0065714_10011716
167 Ga0065712_10068958
168 Ga0065712_10093146
169 Ga0065715_10000604
170 Ga0065715_10004746
171 Ga0070683_100000395
172 Ga0070670_100001063
173 Ga0070670_100037573
174 Ga0070661_100040963
175 Ga0070668_100121539
176 Ga0070669_100132501
177 Ga0070675_100007855
178 Ga0070673_100135283
179 Ga0070688_100003764
180 Ga0070667_100287730
181 Ga0070663_100087712
182 Ga0070685_10014595
183 Ga0070706_100049648
184 Ga0070684_100010724
185 Ga0070697_100163762
186 Ga0068853_100128113
187 Ga0070672_100045042
188 Ga0070665_100015837
189 Ga0068855_100156481
190 Ga0070664_100007179
191 Ga0070664_100015481
192 Ga0068856_100028576
193 Ga0068859_100120342
194 Ga0068863_100017209
195 Ga0068863_100044718
196 Ga0068860_100020477
197 Ga0068862_100278774
198 Ga0070717_10018997
199 Ga0075366_10117859
200 Ga0075433_10102174
201 Ga0097620_100120340
202 Ga0075435_100140088
203 Ga0105243_10072300
204 Ga0105242_10128972
205 Ga0105248_10173930
206 Ga0105248_10249185
207 Ga0105237_10003180
208 Ga0105249_10005179
209 Ga0105239_10215838
210 Ga0157371_10029306
211 Ga0157370_10154148
212 Ga0157369_10001033
213 Ga0157374_10027275
214 Ga0163162_10024771
215 Ga0163162_10055223
216 Ga0157372_10000016
217 Ga0157372_10002580
218 Ga0157372_10072843
219 Ga0163163_10045398
220 Ga0163163_10184523
221 Ga0163161_10112685
222 Ga0207426_1000019
223 Ga0207697_10023003
224 Ga0207684_10045814
225 Ga0207695_10062807
226 Ga0207649_10022996
227 Ga0207646_10014891
228 Ga0207681_10034568
229 Ga0207694_10074401
230 Ga0207650_10146510
231 Ga0207659_10017930
232 Ga0207659_10043485
233 Ga0207669_10069678
234 Ga0207689_10063976
235 Ga0207661_10001442
236 Ga0207679_10027025
237 Ga0207667_10178081
238 Ga0207703_10261399
239 Ga0207678_10038772
240 Ga0207702_10023338
241 Ga0207641_10010705
242 Ga0207641_10017608
243 Ga0207676_10046332
244 Ga0207676_10320464
245 Ga0268266_10016197
246 Ga0265338_10002502
247 Ga0265338_10005519
248 Ga0265324_10005863
249 Ga0265324_10015051
250 Ga0265339_10008800
251 Ga0265316_10000989
252 Ga0265316_10109255
253 Ga0307408_100000154
254 Ga0265342_10062250
255 Ga0307414_10000349
256 Ga0307411_10013543
257 Ga0307411_10115182
258 Ga0316574_0083584
259 Ga0395899_0000414
260 Ga0395901_0013582
261 Ga0451837_0810045
262 Ga0451577_0000066
263 Ga0451577_0001396
264 Ga0451577_0004990
265 Ga0451577_0049492
266 Ga0451577_0049738
267 Ga0453683_0000174
268 Ga0466966_0035359
269 Ga0453684_0000051
270 Ga0453684_0000206
271 Ga0453684_0000558
272 Ga0453684_0000970
273 Ga0453684_0004658
274 Ga0453684_0014290
275 Ga0453684_0092328
276 Ga0453684_0135341
277 Ga0451576_0000002
278 Ga0451576_0000072
279 Ga0451576_0000442
280 Ga0451576_0040505
281 Ga0495594_0058338
282 Ga0495618_0007472
283 Ga0495628_0115446
284 Ga0495630_0008925
285 Ga0495666_0004554
286 Ga0495668_0000068
287 Ga0495634_0003518
288 Ga0495588_0076479
289 Ga0495658_0144627
290 Ga0495674_0030082
291 Ga0495680_0009004
292 Ga0495686_0000335
293 Ga0496101_0024519
294 Ga0496104_0013022
295 Ga0496105_0021098
296 Ga0496108_0001262
297 Ga0496109_0000421
298 Ga0496110_0019957
299 Ga0496110_0034895
300 Ga0496110_0106515
301 Ga0496112_0001306
302 Ga0496112_0005903
303 Ga0496113_0034911
304 Ga0501077_0064466
305 Ga0501241_003523
306 nmdc:mga0k408_112987_c1
307 nmdc:mga0rr50_128072_c1
308 nmdc:mga0a205_54083_c1
309 Ga0500555_000415
310 Ga0500562_000184
311 Ga0500616_0000616
312 Ga0500616_0001059
313 Ga0500645_000244
314 Ga0590075_024280
315 2833641387
316 2881958370
317 2916180613
318 2919442035

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00266

Aminotran_5

Aminotransferase class-V

44

413

0.99

PF00155

Aminotran_1_2

Aminotransferase class I and II

44

269

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
4w91-assembly3.cif.gz_E crystal structure of a cysteine desulfurase sufs from brucella suis bound to plp 0.9889 5 407
6c9e-assembly1.cif.gz_A crystal structure of cysteine desulfurase from legionella pneumophila philadelphia 1 0.9886 6 407
6ndn-assembly1.cif.gz_A crystal structure of selenocysteine lyase from escherichia coli 0.9864 5 407
6o12-assembly1.cif.gz_A e. coli cysteine desulfurase sufs h123a 0.9856 5 407
6o11-assembly1.cif.gz_A-2 e. coli cysteine desulfurase sufs c364a with a cys-aldimine intermediate 0.9854 6 407
ID Description Score Start End Superfamily
1i29A02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9859 41 296 3.40.640.10
af_Q2FZY5_42_298_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9826 38 293 3.40.640.10
af_A0A368UH16_90_350_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9824 38 296 3.40.640.10
af_Q0INV6_1_200_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9821 91 287 3.40.640.10
4w91J02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9768 35 296 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A515KL27-F1-model_v4 cysteine desulfurase (EC 2.8.1.7) 0.992 6 407 GO:0006534
GO:0030170
GO:0031071
AF-A0A5C7RXV8-F1-model_v4 cysteine desulfurase (EC 2.8.1.7) 0.9903 6 401 GO:0006534
GO:0030170
GO:0031071
AF-A0A3D4RQM7-F1-model_v4 Cysteine desulfurase (EC 2.8.1.7) 0.9901 11 407 GO:0006534
GO:0030170
GO:0031071
AF-A0A6G6K960-F1-model_v4 cysteine desulfurase (EC 2.8.1.7) 0.99 1 401 GO:0006534
GO:0030170
GO:0031071
AF-A0A3M1HW76-F1-model_v4 Cysteine desulfurase (EC 2.8.1.7) 0.99 5 407 GO:0006534
GO:0030170
GO:0031071

Map