F233144

General Info

Members Datasets Scaffolds Average Seq Length
159 133 318 247

Family's Representative Sequence

Representative Sequence 3300049571|Ga0501034_0007253|Ga0501034_0007253_5982_6797
Length 271
Sequence MRVVIHQTAEEVSQRAAEMIANVVRQQPRAVLGLATGSTPLATYRRLIEAHRDGLVSFAQVTTFNLDEYVGLAPDHPQSYRYFMHHELFEHIDIDPARCHVPDGLAGDYQAYGQQYEQRIAAAGGIDLQLLGIGSDGHIAFNEPGSSLASRTRLKALTEQTRRDNSRFFGALEAVPKLAISMGVGTILEARSILLLATGSSKADAVRAFIEGPVTSQITASALQLHPEVTVLLDDAAAAWLARRDYYVEVEAVQRELELSSPHHFRLGTGG

Samples

Sample ID Description Type Environment
1 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
14 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
15 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
16 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
17 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
18 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
21 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
22 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
28 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
29 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
30 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
36 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
37 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
38 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
39 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
40 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
41 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
42 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
43 3300025290 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (version 2) Metagenome Rhizosphere
44 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
45 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
62 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
65 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
66 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
67 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
68 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
69 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
70 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
71 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
72 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
73 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
74 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
75 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
76 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
77 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
78 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
79 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
80 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
81 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
82 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
83 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
84 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
85 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
86 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
87 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
88 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
89 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
90 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
91 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
92 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
93 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
94 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
95 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
96 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
97 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
98 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
99 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
100 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
101 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
102 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
103 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
104 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
105 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
106 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
107 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
108 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
109 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
110 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
111 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
112 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
113 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
114 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
115 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
116 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
117 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
118 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
119 2513237093 Rhizobium leguminosarum bv. phaseoli FA23 Isolate Nodule
120 2516653077 Rhizobium acaciae WSM1481 Isolate Nodule
121 2517093000 Rhizobium leguminosarum bv. trifolii SRDI943 Isolate Nodule
122 2517287029 Rhizobium leguminosarum bv. trifolii SRDI565 Isolate Nodule
123 2565956521 Vibrio rhizosphaerae DSM 18581 Isolate Rhizosphere
124 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
125 2811994880 Cellulomonas sp. SLBN-39 Isolate Unclassified
126 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
127 2910809715 Paenarthrobacter sp. CM16 Isolate Unclassified
128 2932426870 Paenarthrobacter sp. 4246 Isolate Rhizosphere
129 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
130 8002745576 Marinomonas spartinae USM8 Isolate Rhizosphere
131 8005556819 Rhizobium sp. WYCCWR 11128 Isolate Nodule
132 8005563573 Rhizobium sp. WYCCWR 11152 Isolate Nodule
133 8023680758 Rhizobium leguminosarum SARCC-132 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 90.57
Metatranscriptomes 0
Isolates 9.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.4
Nodule 4.4
Rhizoplane 0.63
Rhizosphere 79.87
Stem 0
Stem Tuber 0
Unclassified 6.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501034_0007253 3300049571 Bacteria 11831
2 Ga0070683_100000046 3300005329 Bacteria 95134
3 Ga0070683_100238717 3300005329 Bacteria 1729
4 Ga0070670_100000126 3300005331 Bacteria 71644
5 Ga0068869_100515325 3300005334 Bacteria 1000
6 Ga0068868_100000413 3300005338 Bacteria 28929
7 Ga0070689_100002999 3300005340 Bacteria 11103
8 Ga0070689_100190242 3300005340 Bacteria 1671
9 Ga0070709_10057386 3300005434 Bacteria 2466
10 Ga0070713_100045464 3300005436 Bacteria 3598
11 Ga0070708_100071494 3300005445 Bacteria 3124
12 Ga0070707_100024377 3300005468 Bacteria 5729
13 Ga0070684_100000470 3300005535 Bacteria 27507
14 Ga0070684_100089605 3300005535 Bacteria 2734
15 Ga0068853_100000002 3300005539 Bacteria 485323
16 Ga0070672_100015604 3300005543 Bacteria 5416
17 Ga0070693_100422949 3300005547 Unclassified 929
18 Ga0068854_100012712 3300005578 Bacteria 5513
19 Ga0068864_100000007 3300005618 Bacteria 392187
20 Ga0068858_100578570 3300005842 Bacteria 1088
21 Ga0068860_100000121 3300005843 Bacteria 125436
22 Ga0070717_10000034 3300006028 Bacteria 127047
23 Ga0075363_100015678 3300006048 Bacteria 3730
24 Ga0075363_100065037 3300006048 Bacteria 1971
25 Ga0070716_100013845 3300006173 Bacteria 4120
26 Ga0068871_100669332 3300006358 Bacteria 949
27 Ga0075428_100074711 3300006844 Bacteria 3702
28 Ga0075428_100441945 3300006844 Bacteria 1393
29 Ga0075430_100036525 3300006846 Bacteria 4165
30 Ga0075431_100309028 3300006847 Bacteria 1596
31 Ga0075429_100472642 3300006880 Unclassified 1098
32 Ga0075436_100009978 3300006914 Bacteria 6498
33 Ga0075436_100015685 3300006914 Bacteria 5187
34 Ga0075435_100006550 3300007076 Bacteria 8237
35 Ga0099794_10122665 3300007265 Bacteria 1308
36 Ga0105244_10002993 3300009036 Bacteria 12412
37 Ga0105244_10020539 3300009036 Bacteria 3666
38 Ga0105244_10171554 3300009036 Bacteria 1032
39 Ga0111539_10027417 3300009094 Bacteria 6958
40 Ga0111539_10433431 3300009094 Bacteria 1531
41 Ga0114129_10043936 3300009147 Bacteria 6286
42 Ga0105238_10000021 3300009551 Bacteria 207391
43 Ga0157369_10000065 3300013105 Bacteria 144865
44 Ga0157374_10000035 3300013296 Bacteria 180440
45 Ga0157375_10000191 3300013308 Bacteria 57524
46 Ga0157375_10006080 3300013308 Bacteria 10529
47 Ga0157375_11241948 3300013308 Bacteria 875
48 Ga0157380_10055358 3300014326 Bacteria 3150
49 Ga0157377_10000007 3300014745 Bacteria 402005
50 Ga0157376_10000002 3300014969 Bacteria 684532
51 Ga0163161_10429918 3300017792 Bacteria 1064
52 Ga0213873_10002163 3300021358 Bacteria 3369
53 Ga0213876_10000008 3300021384 Bacteria 506740
54 Ga0207673_1013904 3300025290 Bacteria 1059
55 Ga0209758_1005065 3300025297 Bacteria 10448
56 Ga0207697_10000234 3300025315 Bacteria 30196
57 Ga0207655_1003168 3300025728 Bacteria 12417
58 Ga0207655_1012482 3300025728 Bacteria 4962
59 Ga0207699_10031587 3300025906 Bacteria 2975
60 Ga0207646_10008252 3300025922 Bacteria 10454
61 Ga0207694_10000002 3300025924 Bacteria 1165763
62 Ga0207694_10000003 3300025924 Bacteria 1165533
63 Ga0207650_10000035 3300025925 Bacteria 215488
64 Ga0207650_10004174 3300025925 Bacteria 9873
65 Ga0207670_10159420 3300025936 Bacteria 1683
66 Ga0207665_10022353 3300025939 Bacteria 4160
67 Ga0207689_10003757 3300025942 Bacteria 13832
68 Ga0207661_10000002 3300025944 Bacteria 816104
69 Ga0207661_10055931 3300025944 Bacteria 3166
70 Ga0207679_10281009 3300025945 Bacteria 1427
71 Ga0207640_10002248 3300025981 Bacteria 10401
72 Ga0207640_10076078 3300025981 Bacteria 2277
73 Ga0207677_10002678 3300026023 Bacteria 9385
74 Ga0207639_10000009 3300026041 Bacteria 432727
75 Ga0207648_10372905 3300026089 Bacteria 1289
76 Ga0207676_10348590 3300026095 Bacteria 1369
77 Ga0207428_10107411 3300027907 Bacteria 2150
78 Ga0268266_10000027 3300028379 Bacteria 426852
79 Ga0268264_10000434 3300028381 Bacteria 57701
80 Ga0265326_10000005 3300028558 Bacteria 257124
81 Ga0265334_10000024 3300028573 Bacteria 118525
82 Ga0265336_10005594 3300028666 Bacteria 4621
83 Ga0265338_10002392 3300028800 Bacteria 28240
84 Ga0265324_10002577 3300029957 Bacteria 9138
85 Ga0307511_10004093 3300030521 Bacteria 14905
86 Ga0265327_10005423 3300031251 Bacteria 10636
87 Ga0307416_100833117 3300032002 Bacteria 1020
88 Ga0307414_10177544 3300032004 Bacteria 1709
89 Ga0373943_0013325 3300035170 Bacteria 3713
90 Ga0373946_0063622 3300035171 Bacteria 1576
91 Ga0373927_0004267 3300035695 Bacteria 10036
92 Ga0373947_0024031 3300035725 Bacteria 3548
93 Ga0316584_0098351 3300036712 Bacteria 2191
94 Ga0395901_0178355 3300038443 Bacteria 2228
95 Ga0400483_117393 3300039062 Bacteria 27820
96 Ga0400483_176568 3300039062 Bacteria 14085
97 Ga0436365_1347761 3300039437 Bacteria 136063
98 Ga0436362_0298864 3300039453 Bacteria 6416
99 Ga0451833_0404666 3300041491 Bacteria 1591
100 Ga0451835_0301861 3300041492 Bacteria 2141
101 Ga0451839_1449996 3300041496 Bacteria 1123
102 Ga0451845_0253522 3300041501 Bacteria 1591
103 Ga0451847_0868600 3300041503 Bacteria 944
104 Ga0451849_0619682 3300041505 Bacteria 5593
105 Ga0451855_0010750 3300041511 Bacteria 2204
106 Ga0466972_0035488 3300044658 Bacteria 2440
107 Ga0453683_0002086 3300044673 Bacteria 15986
108 Ga0453683_0020816 3300044673 Bacteria 4190
109 Ga0453683_0038785 3300044673 Unclassified 2995
110 Ga0453683_0047004 3300044673 Bacteria 2705
111 Ga0453684_0102019 3300044712 Unclassified 3509
112 Ga0453684_0704694 3300044712 Bacteria 1097
113 Ga0466970_0038901 3300044765 Bacteria 2524
114 Ga0466957_0206572 3300044842 Bacteria 1292
115 Ga0451576_0174949 3300045051 Bacteria 2241
116 Ga0451576_0302287 3300045051 Bacteria 1674
117 Ga0495641_0032736 3300046461 Bacteria 2472
118 Ga0495620_0024816 3300046515 Bacteria 2846
119 Ga0495630_0034048 3300046517 Bacteria 3801
120 Ga0495625_0192436 3300046660 Bacteria 1350
121 Ga0495676_0043374 3300047321 Bacteria 3682
122 Ga0496114_0473533 3300048917 Bacteria 1108
123 Ga0496116_0083103 3300048919 Unclassified 1978
124 Ga0496124_0165102 3300048927 Bacteria 1722
125 Ga0501075_0402659 3300049591 Unclassified 1043
126 Ga0501076_0028126 3300049592 Unclassified 4364
127 nmdc:mga03n38_187203_c1 3300050490 Bacteria 1064
128 nmdc:mga05p37_57063_c1 3300050507 Bacteria 4809
129 nmdc:mga09592_443667_c1 3300050508 Unclassified 1120
130 nmdc:mga0qj67_131895_c1 3300050509 Bacteria 1323
131 nmdc:mga06r32_27298_c1 3300050510 Bacteria 5331
132 nmdc:mga06r32_295074_c1 3300050510 Bacteria 1607
133 nmdc:mga06r32_786586_c1 3300050510 Unclassified 913
134 nmdc:mga08y16_31469_c1 3300050511 Bacteria 5580
135 nmdc:mga08y16_919096_c1 3300050511 Bacteria 860
136 nmdc:mga08x19_15272_c1 3300050514 Bacteria 4670
137 nmdc:mga08x19_511_c1 3300050514 Bacteria 25777
138 nmdc:mga0sz30_125680_c1 3300050516 Bacteria 1128
139 Ga0495601_0129013 3300053077 Bacteria 1646
140 Ga0495612_0096388 3300053078 Bacteria 1257
141 Ga0495655_0000057 3300053083 Bacteria 23645
142 Ga0500618_000468 3300053125 Bacteria 26224
143 Ga0500658_0000230 3300053134 Bacteria 26381
144 Ga0501082_0261469 3300060353 Unclassified 1506
145 2513634246 2513237093 Bacteria 7545552
146 2517039047 2516653077 Bacteria 7555578
147 2517093244 2517093000 Bacteria 7412387
148 2517409511 2517287029 Bacteria 6905599
149 2566036923 2565956521 Bacteria 4468993
150 2776911055 2775507049 Bacteria 6284736
151 2812364055 2811994880 Bacteria 4147780
152 2904500956 2904497146 Bacteria 4731781
153 2910810932 2910809715 Bacteria 4982797
154 2932429981 2932426870 Bacteria 4547726
155 2939675728 2939674588 Bacteria 4844420
156 8002748633 8002745576 Bacteria 4840272
157 8005560614 8005556819 Bacteria 6908598
158 8005563927 8005563573 Bacteria 7153261
159 8023684249 8023680758 Bacteria 7729763
160 Ga0501034_0007253
161 Ga0070683_100000046
162 Ga0070683_100238717
163 Ga0070670_100000126
164 Ga0068869_100515325
165 Ga0068868_100000413
166 Ga0070689_100002999
167 Ga0070689_100190242
168 Ga0070709_10057386
169 Ga0070713_100045464
170 Ga0070708_100071494
171 Ga0070707_100024377
172 Ga0070684_100000470
173 Ga0070684_100089605
174 Ga0068853_100000002
175 Ga0070672_100015604
176 Ga0070693_100422949
177 Ga0068854_100012712
178 Ga0068864_100000007
179 Ga0068858_100578570
180 Ga0068860_100000121
181 Ga0070717_10000034
182 Ga0075363_100015678
183 Ga0075363_100065037
184 Ga0070716_100013845
185 Ga0068871_100669332
186 Ga0075428_100074711
187 Ga0075428_100441945
188 Ga0075430_100036525
189 Ga0075431_100309028
190 Ga0075429_100472642
191 Ga0075436_100009978
192 Ga0075436_100015685
193 Ga0075435_100006550
194 Ga0099794_10122665
195 Ga0105244_10002993
196 Ga0105244_10020539
197 Ga0105244_10171554
198 Ga0111539_10027417
199 Ga0111539_10433431
200 Ga0114129_10043936
201 Ga0105238_10000021
202 Ga0157369_10000065
203 Ga0157374_10000035
204 Ga0157375_10000191
205 Ga0157375_10006080
206 Ga0157375_11241948
207 Ga0157380_10055358
208 Ga0157377_10000007
209 Ga0157376_10000002
210 Ga0163161_10429918
211 Ga0213873_10002163
212 Ga0213876_10000008
213 Ga0207673_1013904
214 Ga0209758_1005065
215 Ga0207697_10000234
216 Ga0207655_1003168
217 Ga0207655_1012482
218 Ga0207699_10031587
219 Ga0207646_10008252
220 Ga0207694_10000002
221 Ga0207694_10000003
222 Ga0207650_10000035
223 Ga0207650_10004174
224 Ga0207670_10159420
225 Ga0207665_10022353
226 Ga0207689_10003757
227 Ga0207661_10000002
228 Ga0207661_10055931
229 Ga0207679_10281009
230 Ga0207640_10002248
231 Ga0207640_10076078
232 Ga0207677_10002678
233 Ga0207639_10000009
234 Ga0207648_10372905
235 Ga0207676_10348590
236 Ga0207428_10107411
237 Ga0268266_10000027
238 Ga0268264_10000434
239 Ga0265326_10000005
240 Ga0265334_10000024
241 Ga0265336_10005594
242 Ga0265338_10002392
243 Ga0265324_10002577
244 Ga0307511_10004093
245 Ga0265327_10005423
246 Ga0307416_100833117
247 Ga0307414_10177544
248 Ga0373943_0013325
249 Ga0373946_0063622
250 Ga0373927_0004267
251 Ga0373947_0024031
252 Ga0316584_0098351
253 Ga0395901_0178355
254 Ga0400483_117393
255 Ga0400483_176568
256 Ga0436365_1347761
257 Ga0436362_0298864
258 Ga0451833_0404666
259 Ga0451835_0301861
260 Ga0451839_1449996
261 Ga0451845_0253522
262 Ga0451847_0868600
263 Ga0451849_0619682
264 Ga0451855_0010750
265 Ga0466972_0035488
266 Ga0453683_0002086
267 Ga0453683_0020816
268 Ga0453683_0038785
269 Ga0453683_0047004
270 Ga0453684_0102019
271 Ga0453684_0704694
272 Ga0466970_0038901
273 Ga0466957_0206572
274 Ga0451576_0174949
275 Ga0451576_0302287
276 Ga0495641_0032736
277 Ga0495620_0024816
278 Ga0495630_0034048
279 Ga0495625_0192436
280 Ga0495676_0043374
281 Ga0496114_0473533
282 Ga0496116_0083103
283 Ga0496124_0165102
284 Ga0501075_0402659
285 Ga0501076_0028126
286 nmdc:mga03n38_187203_c1
287 nmdc:mga05p37_57063_c1
288 nmdc:mga09592_443667_c1
289 nmdc:mga0qj67_131895_c1
290 nmdc:mga06r32_27298_c1
291 nmdc:mga06r32_295074_c1
292 nmdc:mga06r32_786586_c1
293 nmdc:mga08y16_31469_c1
294 nmdc:mga08y16_919096_c1
295 nmdc:mga08x19_15272_c1
296 nmdc:mga08x19_511_c1
297 nmdc:mga0sz30_125680_c1
298 Ga0495601_0129013
299 Ga0495612_0096388
300 Ga0495655_0000057
301 Ga0500618_000468
302 Ga0500658_0000230
303 Ga0501082_0261469
304 2513634246
305 2517039047
306 2517093244
307 2517409511
308 2566036923
309 2776911055
310 2812364055
311 2904500956
312 2910810932
313 2932429981
314 2939675728
315 8002748633
316 8005560614
317 8005563927
318 8023684249

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01182

Glucosamine_iso

Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase

5

232

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
2bkv-assembly1.cif.gz_A structure and kinetics of a monomeric glucosamine-6-phosphate deaminase: missing link of the nagb superfamily 0.97 1 232
2bkv-assembly1.cif.gz_A structure and kinetics of a monomeric glucosamine-6-phosphate deaminase: missing link of the nagb superfamily 0.9618 1 232
2ri0-assembly2.cif.gz_B crystal structure of glucosamine 6-phosphate deaminase (nagb) from s. mutans 0.9545 2 232
1ne7-assembly1.cif.gz_E human glucosamine-6-phosphate deaminase isomerase at 1.75 a resolution complexed with n-acetyl-glucosamine-6-phosphate and 2-deoxy-2-amino-glucitol-6-phosphate 0.9538 1 232
3hn6-assembly1.cif.gz_D crystal structure of glucosamine-6-phosphate deaminase from borrelia burgdorferi 0.9537 1 232
ID Description Score Start End Superfamily
af_Q2G0K8_1_251_3.40.50.1360 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9724 1 232 3.40.50.1360
2bkxB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9694 1 232 3.40.50.1360
af_Q2G0K8_1_251_3.40.50.1360 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9642 1 232 3.40.50.1360
af_M0RCH5_1_250_3.40.50.1360 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9627 36 233 3.40.50.1360
2bkxB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9613 1 232 3.40.50.1360
ID Description Score Start End GO Terms
AF-A0A2T0YDI4-F1-model_v4 deleted 0.9857 1 232
AF-A0A352SYH1-F1-model_v4 Glucosamine-6-phosphate deaminase 0.9852 6 109 GO:0004342
GO:0005737
GO:0006043
GO:0006046
GO:0019262
GO:0042802
AF-A0A5C6W058-F1-model_v4 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) (GlcN6P deaminase) (GNPDA) (Glucosamine-6-phosphate isomerase) 0.9838 1 232 GO:0004342
GO:0005737
GO:0005975
GO:0006043
GO:0006046
GO:0019262
GO:0042802
AF-A0A7X8H9W1-F1-model_v4 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) (GlcN6P deaminase) (GNPDA) (Glucosamine-6-phosphate isomerase) 0.9837 1 232 GO:0004342
GO:0005737
GO:0005975
GO:0006043
GO:0006046
GO:0019262
GO:0042802
AF-A0A2K3ZAZ9-F1-model_v4 deleted 0.983 1 232

Map