F236221

General Info

Members Datasets Scaffolds Average Seq Length
161 124 322 442

Family's Representative Sequence

Representative Sequence 3300005339|Ga0070660_100175830|Ga0070660_1001758301
Length 472
Sequence VLVLTFRLYAVEIKLLCSIFSRNASAVSLNEFAIRSKRTVTPDGLRNTVVVVRDGVIVDVSDPSRETSGIETIDVGNKVLMPGVIDPHVHINEPGRTDWEGFDTATKAAIAGGVTTLVDMPLNSSPVTTTALAFDDKLKATIGKLHTNCGFWGGVVPGNTSEIEKLIDKGVLGFKAFLTHSGIDEFPNTTEDDLRKTMPIIARHNLPLLVHCELTDNHQAVGNNRSYWPYLESRPRRWEDNAIGMMIRLCEEFNCRVHVVHLSSSDSIEQVARAKQKGLPLTVETGQHYLYFNAEQISDGQTQFKCAPPIREKENNERLWQALKDGIIDFVATDHSPATPDLKEIESGDFTKAWGGIASLQFALPVLWSAARQRDCGLNDVAKWLCENPAKLIGKQNSKGKIAKGFDADLIVWDGEKEFTVEEPMISHKHKVTPYLNETLSGVVEQTYLSGDKVFESGKFVQLNKGKIIRRD

Samples

Sample ID Description Type Environment
1 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
7 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
8 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
9 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
10 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
11 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
12 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
13 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
14 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
15 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
16 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
39 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
45 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
46 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
49 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
53 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
54 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
55 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
56 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
57 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
59 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
61 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
93 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
94 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
95 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
98 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
99 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
100 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
101 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
102 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
103 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
104 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
105 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
106 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
107 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
108 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
109 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
110 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
118 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
121 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
122 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
123 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
124 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.8
Nodule 0
Rhizoplane 0
Rhizosphere 78.88
Stem 0
Stem Tuber 0
Unclassified 6.21

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070660_100175830 3300005339 Bacteria 1731
2 rootH1_10008523 3300003316 Bacteria 3807
3 rootH1_10123162 3300003316 Bacteria 4474
4 rootH2_10049053 3300003320 Bacteria 20003
5 rootL2_10020271 3300003322 Bacteria 29229
6 rootL2_10031421 3300003322 Bacteria 4859
7 rootL2_10031422 3300003322 Bacteria 5189
8 rootL2_10193717 3300003322 Bacteria 4669
9 rootL2_10211419 3300003322 Bacteria 3190
10 rootH1_10227494 3300003323 Unclassified 3076
11 JGI25160J50197_1004298 3300003354 Bacteria 6176
12 Ga0055528_1000995 3300003790 Bacteria 18812
13 Ga0055530_10004890 3300003791 Bacteria 6662
14 Ga0055531_10000102 3300003794 Bacteria 92703
15 Ga0065165_1000053 3300005262 Bacteria 189081
16 Ga0065712_10002016 3300005290 Bacteria 4959
17 Ga0065715_10100168 3300005293 Bacteria 3322
18 Ga0070683_100013411 3300005329 Bacteria 7147
19 Ga0070683_100211303 3300005329 Bacteria 1843
20 Ga0070670_100048161 3300005331 Bacteria 3668
21 Ga0070670_100177804 3300005331 Bacteria 1847
22 Ga0068869_100011818 3300005334 Bacteria 5742
23 Ga0070666_10000143 3300005335 Bacteria 48999
24 Ga0070668_100040159 3300005347 Bacteria 3580
25 Ga0070688_100031109 3300005365 Bacteria 3208
26 Ga0070688_100077199 3300005365 Bacteria 2145
27 Ga0070659_100000092 3300005366 Bacteria 67270
28 Ga0070659_100023528 3300005366 Bacteria 4715
29 Ga0070667_100175089 3300005367 Bacteria 1896
30 Ga0070684_100290892 3300005535 Bacteria 1498
31 Ga0070672_100229503 3300005543 Bacteria 1559
32 Ga0068855_100041804 3300005563 Bacteria 5432
33 Ga0068855_100215212 3300005563 Bacteria 2157
34 Ga0068857_100038552 3300005577 Bacteria 4232
35 Ga0068852_100004042 3300005616 Bacteria 10314
36 Ga0068859_100000099 3300005617 Bacteria 80240
37 Ga0068866_10006344 3300005718 Bacteria 4921
38 Ga0068863_100001311 3300005841 Bacteria 24817
39 Ga0068863_100008066 3300005841 Bacteria 10282
40 Ga0068858_100026108 3300005842 Bacteria 5431
41 Ga0068860_100001298 3300005843 Bacteria 27144
42 Ga0068860_100001849 3300005843 Bacteria 22535
43 Ga0068860_100027277 3300005843 Bacteria 5503
44 Ga0068860_100231640 3300005843 Bacteria 1795
45 Ga0068862_100034537 3300005844 Bacteria 4279
46 Ga0081539_10026842 3300005985 Bacteria 3661
47 Ga0075366_10004863 3300006195 Bacteria 7249
48 Ga0075366_10077510 3300006195 Bacteria 1984
49 Ga0097621_100003043 3300006237 Bacteria 11509
50 Ga0097621_100103803 3300006237 Bacteria 2395
51 Ga0068871_100047912 3300006358 Bacteria 3448
52 Ga0097620_100000099 3300006931 Bacteria 80240
53 Ga0111539_10005613 3300009094 Bacteria 16226
54 Ga0105247_10022893 3300009101 Unclassified 3763
55 Ga0105241_10005420 3300009174 Bacteria 9431
56 Ga0105241_10025021 3300009174 Bacteria 4436
57 Ga0105242_10169425 3300009176 Unclassified 1918
58 Ga0105237_10001023 3300009545 Bacteria 37620
59 Ga0105249_10007133 3300009553 Bacteria 9755
60 Ga0105249_10146447 3300009553 Bacteria 2270
61 Ga0105239_10000140 3300010375 Bacteria 101896
62 Ga0105246_10019874 3300011119 Unclassified 4302
63 Ga0157373_10000087 3300013100 Bacteria 80308
64 Ga0157371_10020932 3300013102 Bacteria 4809
65 Ga0157370_10001782 3300013104 Bacteria 26543
66 Ga0157370_10234653 3300013104 Bacteria 1697
67 Ga0157374_10147090 3300013296 Unclassified 2289
68 Ga0157378_10078267 3300013297 Bacteria 2982
69 Ga0157378_10301325 3300013297 Bacteria 1551
70 Ga0163162_10001451 3300013306 Bacteria 22074
71 Ga0157375_10065878 3300013308 Bacteria 3613
72 Ga0157380_10002002 3300014326 Bacteria 13580
73 Ga0157380_10087725 3300014326 Bacteria 2558
74 Ga0157380_10218827 3300014326 Bacteria 1702
75 Ga0157377_10007840 3300014745 Bacteria 5177
76 Ga0157376_10056286 3300014969 Bacteria 3285
77 Ga0209026_1000505 3300025250 Bacteria 27798
78 Ga0209673_1000034 3300025273 Bacteria 328788
79 Ga0209564_1002598 3300025295 Bacteria 13858
80 Ga0209564_1002679 3300025295 Bacteria 13506
81 Ga0209758_1003706 3300025297 Bacteria 13553
82 Ga0209758_1023881 3300025297 Unclassified 2747
83 Ga0209050_1000673 3300025298 Bacteria 51628
84 Ga0207426_1000821 3300025302 Bacteria 33275
85 Ga0209257_1000004 3300025304 Bacteria 1678347
86 Ga0209257_1003313 3300025304 Bacteria 13977
87 Ga0207697_10022801 3300025315 Bacteria 2564
88 Ga0207710_10011329 3300025900 Bacteria 3755
89 Ga0207680_10000096 3300025903 Bacteria 40670
90 Ga0207645_10040005 3300025907 Bacteria 3003
91 Ga0207654_10000240 3300025911 Bacteria 33102
92 Ga0207695_10142025 3300025913 Bacteria 2348
93 Ga0207671_10001586 3300025914 Bacteria 25838
94 Ga0207681_10015721 3300025923 Bacteria 4724
95 Ga0207650_10125932 3300025925 Bacteria 2000
96 Ga0207659_10074492 3300025926 Bacteria 2488
97 Ga0207690_10000309 3300025932 Bacteria 33416
98 Ga0207690_10119355 3300025932 Bacteria 1913
99 Ga0207706_10031029 3300025933 Bacteria 4763
100 Ga0207670_10061411 3300025936 Bacteria 2564
101 Ga0207689_10001706 3300025942 Bacteria 20803
102 Ga0207661_10008835 3300025944 Bacteria 7210
103 Ga0207661_10180355 3300025944 Bacteria 1844
104 Ga0207679_10013138 3300025945 Bacteria 5424
105 Ga0207667_10046085 3300025949 Bacteria 4616
106 Ga0207667_10181757 3300025949 Bacteria 2159
107 Ga0207712_10001719 3300025961 Bacteria 14686
108 Ga0207668_10012967 3300025972 Bacteria 5122
109 Ga0207668_10049180 3300025972 Bacteria 2897
110 Ga0207658_10094007 3300025986 Unclassified 2332
111 Ga0207658_10245969 3300025986 Bacteria 1518
112 Ga0207677_10042619 3300026023 Bacteria 3011
113 Ga0207708_10058399 3300026075 Bacteria 2943
114 Ga0207702_10106985 3300026078 Bacteria 2479
115 Ga0207641_10000998 3300026088 Bacteria 28957
116 Ga0207641_10013301 3300026088 Bacteria 6751
117 Ga0207648_10000937 3300026089 Bacteria 32934
118 Ga0207674_10004099 3300026116 Bacteria 17649
119 Ga0207674_10013652 3300026116 Bacteria 8996
120 Ga0207675_100000507 3300026118 Bacteria 37845
121 Ga0207698_10006965 3300026142 Bacteria 7073
122 Ga0268265_10062058 3300028380 Bacteria 2870
123 Ga0268264_10001066 3300028381 Bacteria 27233
124 Ga0268264_10007607 3300028381 Bacteria 9032
125 Ga0268264_10057434 3300028381 Bacteria 3255
126 Ga0268264_10147071 3300028381 Bacteria 2108
127 Ga0307515_10000024 3300028794 Bacteria 393119
128 Ga0307511_10000651 3300030521 Bacteria 37072
129 Ga0265327_10007307 3300031251 Bacteria 8564
130 Ga0307509_10080204 3300031507 Unclassified 3376
131 Ga0307408_100001197 3300031548 Bacteria 19594
132 Ga0307408_100002615 3300031548 Bacteria 12534
133 Ga0307518_10123116 3300031838 Bacteria 1832
134 Ga0307409_100199994 3300031995 Bacteria 1787
135 Ga0307414_10092038 3300032004 Bacteria 2256
136 Ga0439445_0007039 3300042004 Bacteria 2600
137 Ga0439449_0009902 3300042007 Bacteria 3605
138 Ga0439449_0011163 3300042007 Unclassified 3383
139 Ga0466969_0001622 3300044656 Bacteria 12048
140 Ga0466968_0006985 3300044735 Unclassified 4278
141 Ga0466957_0000530 3300044842 Bacteria 19237
142 Ga0466959_0000002 3300045049 Bacteria 362671
143 Ga0495633_0000017 3300046558 Bacteria 249973
144 Ga0495672_0011343 3300047320 Bacteria 6295
145 Ga0495686_0011419 3300047472 Bacteria 6258
146 Ga0496126_0032961 3300048929 Bacteria 4876
147 Ga0501032_0005292 3300049569 Bacteria 9596
148 Ga0501033_0000610 3300049570 Bacteria 33102
149 Ga0501034_0000172 3300049571 Bacteria 120544
150 Ga0501037_0008961 3300049573 Bacteria 7330
151 Ga0501039_0000906 3300049575 Bacteria 21601
152 Ga0501043_0004436 3300049579 Bacteria 11402
153 Ga0501047_0071556 3300049581 Bacteria 3338
154 Ga0501241_000791 3300049758 Bacteria 6704
155 Ga0501035_0002297 3300049822 Bacteria 18882
156 Ga0501044_0001010 3300049823 Bacteria 33787
157 Ga0501045_0001691 3300049824 Bacteria 14854
158 nmdc:mga08y16_11997_c1 3300050511 Bacteria 9100
159 Ga0500568_0000088 3300053139 Bacteria 89215
160 Ga0500622_0001731 3300053156 Bacteria 16871
161 Ga0500611_000003 3300053727 Bacteria 333431
162 Ga0070660_100175830
163 rootH1_10008523
164 rootH1_10123162
165 rootH2_10049053
166 rootL2_10020271
167 rootL2_10031421
168 rootL2_10031422
169 rootL2_10193717
170 rootL2_10211419
171 rootH1_10227494
172 JGI25160J50197_1004298
173 Ga0055528_1000995
174 Ga0055530_10004890
175 Ga0055531_10000102
176 Ga0065165_1000053
177 Ga0065712_10002016
178 Ga0065715_10100168
179 Ga0070683_100013411
180 Ga0070683_100211303
181 Ga0070670_100048161
182 Ga0070670_100177804
183 Ga0068869_100011818
184 Ga0070666_10000143
185 Ga0070668_100040159
186 Ga0070688_100031109
187 Ga0070688_100077199
188 Ga0070659_100000092
189 Ga0070659_100023528
190 Ga0070667_100175089
191 Ga0070684_100290892
192 Ga0070672_100229503
193 Ga0068855_100041804
194 Ga0068855_100215212
195 Ga0068857_100038552
196 Ga0068852_100004042
197 Ga0068859_100000099
198 Ga0068866_10006344
199 Ga0068863_100001311
200 Ga0068863_100008066
201 Ga0068858_100026108
202 Ga0068860_100001298
203 Ga0068860_100001849
204 Ga0068860_100027277
205 Ga0068860_100231640
206 Ga0068862_100034537
207 Ga0081539_10026842
208 Ga0075366_10004863
209 Ga0075366_10077510
210 Ga0097621_100003043
211 Ga0097621_100103803
212 Ga0068871_100047912
213 Ga0097620_100000099
214 Ga0111539_10005613
215 Ga0105247_10022893
216 Ga0105241_10005420
217 Ga0105241_10025021
218 Ga0105242_10169425
219 Ga0105237_10001023
220 Ga0105249_10007133
221 Ga0105249_10146447
222 Ga0105239_10000140
223 Ga0105246_10019874
224 Ga0157373_10000087
225 Ga0157371_10020932
226 Ga0157370_10001782
227 Ga0157370_10234653
228 Ga0157374_10147090
229 Ga0157378_10078267
230 Ga0157378_10301325
231 Ga0163162_10001451
232 Ga0157375_10065878
233 Ga0157380_10002002
234 Ga0157380_10087725
235 Ga0157380_10218827
236 Ga0157377_10007840
237 Ga0157376_10056286
238 Ga0209026_1000505
239 Ga0209673_1000034
240 Ga0209564_1002598
241 Ga0209564_1002679
242 Ga0209758_1003706
243 Ga0209758_1023881
244 Ga0209050_1000673
245 Ga0207426_1000821
246 Ga0209257_1000004
247 Ga0209257_1003313
248 Ga0207697_10022801
249 Ga0207710_10011329
250 Ga0207680_10000096
251 Ga0207645_10040005
252 Ga0207654_10000240
253 Ga0207695_10142025
254 Ga0207671_10001586
255 Ga0207681_10015721
256 Ga0207650_10125932
257 Ga0207659_10074492
258 Ga0207690_10000309
259 Ga0207690_10119355
260 Ga0207706_10031029
261 Ga0207670_10061411
262 Ga0207689_10001706
263 Ga0207661_10008835
264 Ga0207661_10180355
265 Ga0207679_10013138
266 Ga0207667_10046085
267 Ga0207667_10181757
268 Ga0207712_10001719
269 Ga0207668_10012967
270 Ga0207668_10049180
271 Ga0207658_10094007
272 Ga0207658_10245969
273 Ga0207677_10042619
274 Ga0207708_10058399
275 Ga0207702_10106985
276 Ga0207641_10000998
277 Ga0207641_10013301
278 Ga0207648_10000937
279 Ga0207674_10004099
280 Ga0207674_10013652
281 Ga0207675_100000507
282 Ga0207698_10006965
283 Ga0268265_10062058
284 Ga0268264_10001066
285 Ga0268264_10007607
286 Ga0268264_10057434
287 Ga0268264_10147071
288 Ga0307515_10000024
289 Ga0307511_10000651
290 Ga0265327_10007307
291 Ga0307509_10080204
292 Ga0307408_100001197
293 Ga0307408_100002615
294 Ga0307518_10123116
295 Ga0307409_100199994
296 Ga0307414_10092038
297 Ga0439445_0007039
298 Ga0439449_0009902
299 Ga0439449_0011163
300 Ga0466969_0001622
301 Ga0466968_0006985
302 Ga0466957_0000530
303 Ga0466959_0000002
304 Ga0495633_0000017
305 Ga0495672_0011343
306 Ga0495686_0011419
307 Ga0496126_0032961
308 Ga0501032_0005292
309 Ga0501033_0000610
310 Ga0501034_0000172
311 Ga0501037_0008961
312 Ga0501039_0000906
313 Ga0501043_0004436
314 Ga0501047_0071556
315 Ga0501241_000791
316 Ga0501035_0002297
317 Ga0501044_0001010
318 Ga0501045_0001691
319 nmdc:mga08y16_11997_c1
320 Ga0500568_0000088
321 Ga0500622_0001731
322 Ga0500611_000003

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01979

Amidohydro_1

Amidohydrolase family

79

459

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
3hm7-assembly1.cif.gz_B crystal structure of allantoinase from bacillus halodurans c-125 0.9371 4 430
3e74-assembly1.cif.gz_D crystal structure of e. coli allantoinase with iron ions at the metal center 0.9349 2 444
3e74-assembly1.cif.gz_B crystal structure of e. coli allantoinase with iron ions at the metal center 0.9337 2 444
3e74-assembly1.cif.gz_C crystal structure of e. coli allantoinase with iron ions at the metal center 0.9324 2 444
8hfd-assembly1.cif.gz_A crystal structure of allantoinase from e. coli bl21 0.9313 2 444
ID Description Score Start End Superfamily
af_Q5A7L5_309_569_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9771 195 430 3.20.20.140
af_F1RB68_4_438_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9701 1 430 3.20.20.140
af_Q54SV3_1_453_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9604 2 431 3.20.20.140
af_F1RB68_4_438_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.957 1 430 3.20.20.140
af_P32375_65_377_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9522 55 365 3.20.20.140
ID Description Score Start End GO Terms
AF-A0A2S9GBA9-F1-model_v4 Allantoinase 0.9867 224 306 GO:0004038
GO:0005737
GO:0006145
AF-B0D0J9-F1-model_v4 allantoinase (EC 3.5.2.5) 0.98 58 443 GO:0000256
GO:0004038
GO:0005737
GO:0006145
GO:0008270
GO:0050897
AF-A0A553MN19-F1-model_v4 allantoinase (EC 3.5.2.5) 0.9771 53 444 GO:0000256
GO:0004038
GO:0005737
GO:0006145
GO:0008270
GO:0050897
AF-A0A6I5CQV1-F1-model_v4 allantoinase (EC 3.5.2.5) 0.9766 82 447 GO:0000256
GO:0004038
GO:0005737
GO:0006145
GO:0008270
GO:0050897
AF-A0A444UDI8-F1-model_v4 allantoinase (EC 3.5.2.5) 0.9756 44 396 GO:0000256
GO:0004038
GO:0005737
GO:0006145
GO:0008270
GO:0050897

Map