F236255

General Info

Members Datasets Scaffolds Average Seq Length
161 128 322 433

Family's Representative Sequence

Representative Sequence 3300005353|Ga0070669_100105606|Ga0070669_1001056062
Length 467
Sequence MMNIRRWHLVLAIAALSACTGVAKLPLQATVGPDPALPPPQRSLIPTVNVADATAWQPNERPVAAPGLAVAKFADGLQHPRWLYVLPNGDVLVAETDAPPKPEDGTGLRGFLMKQFMKKAGSGRPSANRITLLRDTNGDGTADTRTTFVDGLNSPFGMVLVGDSFFVAATDALLRFPYSKGETHITASPTKIVDLPGGPINHHWTKNVIASPDGSKLYVTVGSNSNAGENGIEKEAGRAAIWEVDVKTGQHRIFASGLRNPNGMAWESQTGALWTSVNERDELGDDLVPDYLTSVRDGGFYGWPYSYYGSHMDPRVEPQRPDLVAKALVPDYALGAHTASLGLTAADGAALPPDYRQGMFVGRHGSWNRRPRSGYDVIFVPFANGKPSGAPLPVLSGFVTSNGDARGRPVGLAIDRHGALLVADDVGNTVWRVTAVVSNNTGQTAAVHTAPVERDTRSPARPGTVAQ

Samples

Sample ID Description Type Environment
1 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
25 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
26 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
30 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
41 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
42 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
44 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
45 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
69 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
72 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
73 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
74 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
75 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
76 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
77 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
78 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
79 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
81 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
82 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
83 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
84 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
85 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
86 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
87 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
88 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
89 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
90 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
91 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
92 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
99 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
100 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
101 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
102 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
103 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
104 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
105 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
106 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
107 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
108 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
109 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
110 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
111 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
112 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
113 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
114 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
115 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
116 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
117 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
118 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
119 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
120 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
121 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
122 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
123 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
124 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
125 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
126 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
127 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
128 2857553236 Duganella sp. R-74557 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.89
Metatranscriptomes 1.24
Isolates 1.86

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.35
Nodule 0
Rhizoplane 2.48
Rhizosphere 88.82
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070669_100105606 3300005353 Bacteria 2131
2 Ga0070676_10125399 3300005328 Bacteria 1617
3 Ga0070683_100072937 3300005329 Bacteria 3205
4 Ga0070666_10000150 3300005335 Bacteria 47746
5 Ga0070687_100025829 3300005343 Bacteria 2822
6 Ga0070671_100047481 3300005355 Bacteria 3571
7 Ga0070671_100195562 3300005355 Bacteria 1714
8 Ga0070674_100145418 3300005356 Bacteria 1784
9 Ga0070709_10000631 3300005434 Bacteria 20142
10 Ga0070714_100022967 3300005435 Bacteria 5119
11 Ga0070711_100067699 3300005439 Bacteria 2506
12 Ga0070663_100060040 3300005455 Bacteria 2734
13 Ga0070662_100150776 3300005457 Bacteria 1810
14 Ga0070681_10085983 3300005458 Bacteria 3097
15 Ga0068867_100012295 3300005459 Bacteria 6054
16 Ga0070685_10003051 3300005466 Bacteria 8538
17 Ga0070679_100012419 3300005530 Bacteria 8138
18 Ga0070684_100022249 3300005535 Bacteria 5284
19 Ga0068853_100004819 3300005539 Bacteria 10492
20 Ga0070672_100180291 3300005543 Bacteria 1760
21 Ga0070665_100001043 3300005548 Bacteria 34717
22 Ga0070664_100035312 3300005564 Bacteria 4196
23 Ga0068856_100000185 3300005614 Bacteria 64973
24 Ga0068856_100005957 3300005614 Bacteria 11999
25 Ga0068852_100011741 3300005616 Bacteria 6613
26 Ga0075364_10029829 3300006051 Bacteria 3499
27 Ga0070712_100000408 3300006175 Bacteria 24528
28 Ga0070712_100004070 3300006175 Bacteria 8977
29 Ga0075367_10007550 3300006178 Bacteria 5578
30 Ga0075428_100131951 3300006844 Bacteria 2717
31 Ga0075430_100111418 3300006846 Bacteria 2282
32 Ga0075436_100000023 3300006914 Bacteria 116796
33 Ga0105241_10022547 3300009174 Bacteria 4665
34 Ga0105241_10077070 3300009174 Bacteria 2602
35 Ga0105248_10001419 3300009177 Bacteria 26778
36 Ga0105248_10008721 3300009177 Bacteria 11137
37 Ga0105237_10024098 3300009545 Bacteria 6226
38 Ga0105238_10000026 3300009551 Bacteria 195584
39 Ga0105238_10019871 3300009551 Bacteria 6837
40 Ga0105032_100592 3300009979 Bacteria 3577
41 Ga0105239_10017874 3300010375 Bacteria 7842
42 Ga0105239_10036027 3300010375 Bacteria 5432
43 Ga0105239_10036351 3300010375 Bacteria 5408
44 Ga0157373_10025211 3300013100 Bacteria 4304
45 Ga0157373_10027307 3300013100 Bacteria 4117
46 Ga0157373_10154467 3300013100 Bacteria 1615
47 Ga0157369_10000032 3300013105 Bacteria 202272
48 Ga0157378_10036537 3300013297 Bacteria 4347
49 Ga0157372_10011893 3300013307 Bacteria 9273
50 Ga0157372_10054385 3300013307 Bacteria 4465
51 Ga0157372_10067140 3300013307 Bacteria 4030
52 Ga0157380_10104825 3300014326 Bacteria 2363
53 Ga0157379_10003311 3300014968 Bacteria 13644
54 Ga0157379_10049637 3300014968 Bacteria 3747
55 Ga0206353_10204651 3300020082 Bacteria 4466
56 Ga0213876_10073202 3300021384 Bacteria 1809
57 Ga0224712_10008950 3300022467 Bacteria 2994
58 Ga0207647_10003354 3300025904 Bacteria 12013
59 Ga0207645_10012606 3300025907 Bacteria 5732
60 Ga0207654_10013122 3300025911 Bacteria 4257
61 Ga0207707_10024952 3300025912 Bacteria 5231
62 Ga0207695_10001566 3300025913 Bacteria 37361
63 Ga0207693_10001052 3300025915 Bacteria 24678
64 Ga0207657_10026829 3300025919 Bacteria 5285
65 Ga0207694_10000034 3300025924 Bacteria 197650
66 Ga0207694_10004744 3300025924 Bacteria 10571
67 Ga0207700_10000010 3300025928 Bacteria 298473
68 Ga0207700_10204058 3300025928 Bacteria 1667
69 Ga0207664_10018569 3300025929 Bacteria 5124
70 Ga0207644_10085774 3300025931 Bacteria 2336
71 Ga0207691_10020831 3300025940 Bacteria 6195
72 Ga0207691_10029392 3300025940 Bacteria 5141
73 Ga0207661_10195304 3300025944 Bacteria 1776
74 Ga0207639_10011286 3300026041 Bacteria 6199
75 Ga0207678_10097340 3300026067 Bacteria 2515
76 Ga0207708_10004246 3300026075 Bacteria 10555
77 Ga0207702_10000174 3300026078 Bacteria 77455
78 Ga0207648_10019047 3300026089 Bacteria 6197
79 Ga0207676_10090442 3300026095 Bacteria 2512
80 Ga0207674_10040009 3300026116 Bacteria 4858
81 Ga0207674_10220487 3300026116 Bacteria 1845
82 Ga0207698_10193729 3300026142 Bacteria 1813
83 Ga0209998_10006645 3300027717 Bacteria 2401
84 Ga0209974_10005511 3300027876 Bacteria 4449
85 Ga0207428_10005259 3300027907 Bacteria 12090
86 Ga0268266_10000348 3300028379 Bacteria 72116
87 Ga0268265_10067028 3300028380 Bacteria 2777
88 Ga0265320_10000331 3300031240 Bacteria 38699
89 Ga0307516_10018161 3300031730 Bacteria 7314
90 Ga0307405_10002744 3300031731 Bacteria 7891
91 Ga0307410_10001856 3300031852 Bacteria 9853
92 Ga0307409_100000595 3300031995 Bacteria 15778
93 Ga0307416_100029011 3300032002 Bacteria 4126
94 Ga0307510_10003705 3300033180 Bacteria 17861
95 Ga0373929_0000003 3300035085 Bacteria 575058
96 Ga0373937_0008822 3300036401 Bacteria 8747
97 Ga0395898_0167333 3300037466 Bacteria 2102
98 Ga0436365_0257345 3300039437 Bacteria 14502
99 Ga0451798_0098720 3300041458 Bacteria 1536
100 Ga0451807_0315897 3300041486 Bacteria 2373
101 Ga0451577_0003955 3300042876 Bacteria 15990
102 Ga0451577_0109670 3300042876 Bacteria 2468
103 Ga0453684_0336258 3300044712 Bacteria 1706
104 Ga0495627_000065 3300046453 Bacteria 132414
105 Ga0495644_0046003 3300046523 Bacteria 1640
106 Ga0495660_0000207 3300046810 Bacteria 61056
107 Ga0496105_0234839 3300048908 Bacteria 1489
108 Ga0496106_0116083 3300048909 Bacteria 2088
109 Ga0495678_000001 3300049459 Bacteria 1060340
110 Ga0501036_0043957 3300049572 Bacteria 3783
111 Ga0501037_0074597 3300049573 Bacteria 2465
112 Ga0501040_0009335 3300049576 Bacteria 6390
113 Ga0501041_0001663 3300049577 Bacteria 12444
114 Ga0501042_0030118 3300049578 Bacteria 3832
115 Ga0501047_0040871 3300049581 Bacteria 4484
116 Ga0501047_0047692 3300049581 Bacteria 4138
117 Ga0501047_0299543 3300049581 Bacteria 1451
118 Ga0501067_0022822 3300049583 Bacteria 3464
119 Ga0501070_0006847 3300049586 Bacteria 9699
120 Ga0501070_0123624 3300049586 Bacteria 2138
121 Ga0501071_0003105 3300049587 Bacteria 10310
122 Ga0501072_0012367 3300049588 Bacteria 6522
123 Ga0501072_0014768 3300049588 Bacteria 5987
124 Ga0501073_0009568 3300049589 Bacteria 7147
125 Ga0501073_0041111 3300049589 Bacteria 3267
126 Ga0501074_0000149 3300049590 Bacteria 36207
127 Ga0501075_0000235 3300049591 Bacteria 29720
128 Ga0501075_0003692 3300049591 Bacteria 10276
129 Ga0501076_0044392 3300049592 Bacteria 3505
130 Ga0501077_0000114 3300049593 Bacteria 42581
131 Ga0501077_0136742 3300049593 Bacteria 1554
132 Ga0501079_0163566 3300049741 Bacteria 1735
133 Ga0501080_0002555 3300049742 Bacteria 15933
134 Ga0501080_0010153 3300049742 Bacteria 8610
135 Ga0501080_0010724 3300049742 Bacteria 8382
136 Ga0501080_0035267 3300049742 Bacteria 4669
137 Ga0501080_0178153 3300049742 Bacteria 1957
138 Ga0501081_0005276 3300049743 Bacteria 8332
139 Ga0501083_0008720 3300049744 Bacteria 7153
140 Ga0501083_0071606 3300049744 Bacteria 2305
141 Ga0501045_0007082 3300049824 Bacteria 7774
142 nmdc:mga0k408_726_c1 3300050493 Bacteria 18066
143 nmdc:mga05p37_133554_c1 3300050507 Bacteria 3044
144 nmdc:mga09592_168226_c1 3300050508 Bacteria 1895
145 nmdc:mga0qj67_78282_c1 3300050509 Bacteria 2646
146 nmdc:mga08y16_172460_c1 3300050511 Bacteria 2247
147 nmdc:mga08y16_6308_c1 3300050511 Bacteria 12435
148 nmdc:mga0rr50_91974_c1 3300050513 Bacteria 2364
149 nmdc:mga08x19_50_c1 3300050514 Bacteria 129410
150 Ga0500556_0000442 3300053104 Bacteria 29531
151 Ga0500595_008678 3300053119 Bacteria 4143
152 Ga0500616_0012787 3300053153 Bacteria 4899
153 Ga0500637_0151180 3300053178 Bacteria 1341
154 Ga0501084_0011775 3300054114 Bacteria 7241
155 Ga0501084_0200185 3300054114 Bacteria 1685
156 Ga0501082_0000157 3300060353 Bacteria 57772
157 Ga0501082_0041555 3300060353 Bacteria 3964
158 Ga0530510_0000234 3300061734 Bacteria 34829
159 2644258795 2643221646 Bacteria 6433402
160 2842777812 2842775625 Bacteria 5587290
161 2857554951 2857553236 Bacteria 6166726
162 Ga0070669_100105606
163 Ga0070676_10125399
164 Ga0070683_100072937
165 Ga0070666_10000150
166 Ga0070687_100025829
167 Ga0070671_100047481
168 Ga0070671_100195562
169 Ga0070674_100145418
170 Ga0070709_10000631
171 Ga0070714_100022967
172 Ga0070711_100067699
173 Ga0070663_100060040
174 Ga0070662_100150776
175 Ga0070681_10085983
176 Ga0068867_100012295
177 Ga0070685_10003051
178 Ga0070679_100012419
179 Ga0070684_100022249
180 Ga0068853_100004819
181 Ga0070672_100180291
182 Ga0070665_100001043
183 Ga0070664_100035312
184 Ga0068856_100000185
185 Ga0068856_100005957
186 Ga0068852_100011741
187 Ga0075364_10029829
188 Ga0070712_100000408
189 Ga0070712_100004070
190 Ga0075367_10007550
191 Ga0075428_100131951
192 Ga0075430_100111418
193 Ga0075436_100000023
194 Ga0105241_10022547
195 Ga0105241_10077070
196 Ga0105248_10001419
197 Ga0105248_10008721
198 Ga0105237_10024098
199 Ga0105238_10000026
200 Ga0105238_10019871
201 Ga0105032_100592
202 Ga0105239_10017874
203 Ga0105239_10036027
204 Ga0105239_10036351
205 Ga0157373_10025211
206 Ga0157373_10027307
207 Ga0157373_10154467
208 Ga0157369_10000032
209 Ga0157378_10036537
210 Ga0157372_10011893
211 Ga0157372_10054385
212 Ga0157372_10067140
213 Ga0157380_10104825
214 Ga0157379_10003311
215 Ga0157379_10049637
216 Ga0206353_10204651
217 Ga0213876_10073202
218 Ga0224712_10008950
219 Ga0207647_10003354
220 Ga0207645_10012606
221 Ga0207654_10013122
222 Ga0207707_10024952
223 Ga0207695_10001566
224 Ga0207693_10001052
225 Ga0207657_10026829
226 Ga0207694_10000034
227 Ga0207694_10004744
228 Ga0207700_10000010
229 Ga0207700_10204058
230 Ga0207664_10018569
231 Ga0207644_10085774
232 Ga0207691_10020831
233 Ga0207691_10029392
234 Ga0207661_10195304
235 Ga0207639_10011286
236 Ga0207678_10097340
237 Ga0207708_10004246
238 Ga0207702_10000174
239 Ga0207648_10019047
240 Ga0207676_10090442
241 Ga0207674_10040009
242 Ga0207674_10220487
243 Ga0207698_10193729
244 Ga0209998_10006645
245 Ga0209974_10005511
246 Ga0207428_10005259
247 Ga0268266_10000348
248 Ga0268265_10067028
249 Ga0265320_10000331
250 Ga0307516_10018161
251 Ga0307405_10002744
252 Ga0307410_10001856
253 Ga0307409_100000595
254 Ga0307416_100029011
255 Ga0307510_10003705
256 Ga0373929_0000003
257 Ga0373937_0008822
258 Ga0395898_0167333
259 Ga0436365_0257345
260 Ga0451798_0098720
261 Ga0451807_0315897
262 Ga0451577_0003955
263 Ga0451577_0109670
264 Ga0453684_0336258
265 Ga0495627_000065
266 Ga0495644_0046003
267 Ga0495660_0000207
268 Ga0496105_0234839
269 Ga0496106_0116083
270 Ga0495678_000001
271 Ga0501036_0043957
272 Ga0501037_0074597
273 Ga0501040_0009335
274 Ga0501041_0001663
275 Ga0501042_0030118
276 Ga0501047_0040871
277 Ga0501047_0047692
278 Ga0501047_0299543
279 Ga0501067_0022822
280 Ga0501070_0006847
281 Ga0501070_0123624
282 Ga0501071_0003105
283 Ga0501072_0012367
284 Ga0501072_0014768
285 Ga0501073_0009568
286 Ga0501073_0041111
287 Ga0501074_0000149
288 Ga0501075_0000235
289 Ga0501075_0003692
290 Ga0501076_0044392
291 Ga0501077_0000114
292 Ga0501077_0136742
293 Ga0501079_0163566
294 Ga0501080_0002555
295 Ga0501080_0010153
296 Ga0501080_0010724
297 Ga0501080_0035267
298 Ga0501080_0178153
299 Ga0501081_0005276
300 Ga0501083_0008720
301 Ga0501083_0071606
302 Ga0501045_0007082
303 nmdc:mga0k408_726_c1
304 nmdc:mga05p37_133554_c1
305 nmdc:mga09592_168226_c1
306 nmdc:mga0qj67_78282_c1
307 nmdc:mga08y16_172460_c1
308 nmdc:mga08y16_6308_c1
309 nmdc:mga0rr50_91974_c1
310 nmdc:mga08x19_50_c1
311 Ga0500556_0000442
312 Ga0500595_008678
313 Ga0500616_0012787
314 Ga0500637_0151180
315 Ga0501084_0011775
316 Ga0501084_0200185
317 Ga0501082_0000157
318 Ga0501082_0041555
319 Ga0530510_0000234
320 2644258795
321 2842777812
322 2857554951

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF23500

110

366

0.7

PF07995

GSDH

Glucose / Sorbosone dehydrogenase

167

364

0.67

Structural Annotation

Top 5 Hits

ID Description Score Start End
3a9h-assembly1.cif.gz_A crystal structure of pqq-dependent sugar dehydrogenase holo-form 0.7629 67 435
6i1q-assembly1.cif.gz_A iodide structure of trichoderma reesei carbohydrate-active enzymes family aa12 0.7513 49 436
3a9h-assembly1.cif.gz_A crystal structure of pqq-dependent sugar dehydrogenase holo-form 0.7502 67 435
7cdy-assembly2.cif.gz_B crystal structure of glucose dehydrogenase 0.7382 69 436
7cdy-assembly2.cif.gz_B crystal structure of glucose dehydrogenase 0.7342 69 436
ID Description Score Start End Superfamily
3a9gA00 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.7676 67 435 2.120.10.30
af_I6Y293_69_358_2.120.10.30 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.7624 73 422 2.120.10.30
3a9gA00 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.7548 67 435 2.120.10.30
af_Q8K450_481_639_2.120.10.30 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.7309 73 277 2.120.10.30
2ismB00 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.7192 67 433 2.120.10.30
ID Description Score Start End GO Terms
AF-A0A4Q6FWR2-F1-model_v4 Sorbosone dehydrogenase family protein 0.9837 346 437
AF-A0A480AU21-F1-model_v4 Glucose/Sorbosone dehydrogenase domain-containing protein 0.9826 289 437
AF-A0A528NVY6-F1-model_v4 deleted 0.9822 290 410
AF-A0A1I3AN64-F1-model_v4 Glucose/Sorbosone dehydrogenase domain-containing protein 0.9815 19 433
AF-A0A2R7L948-F1-model_v4 deleted 0.9804 40 437

Map