F237233

General Info

Members Datasets Scaffolds Average Seq Length
161 101 322 319

Family's Representative Sequence

Representative Sequence 3300028577|Ga0265318_10000032|Ga0265318_1000003258
Length 353
Sequence MVIFAHGMTIFARTRQVKNQHASCPAGGFAVLCPIPMNTRPLGRTGLQVPVLSYGASSLGSVFRRTDDNEGIRSVHVALDLGMNFIDVSPYYGATKAETVLGRALKSVRRDRYILATKVGQYGDGIFDFSADRVTRSLDESCARLGTDHIDLLQCHDIEFADLNQIASETLPALVKLRAAGRIGHIGITGLPLKIFPAVLDRVAPGTVETILSFCRYELNDTALESLIPDLQQRGVGIINASPTGMGLLTERGVPPWHPAPPALLAGARRAVEYCQAIGADIVKLAVQFCVAHPGIATTLIGSANPDNIRKNIAYAEAPIDFELLAKVLEILKPIHNHNFTRGRPENHDVIIS

Samples

Sample ID Description Type Environment
1 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
2 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
3 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
10 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
29 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
30 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
31 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
32 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
33 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
34 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
35 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
38 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
39 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
40 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
53 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
54 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
55 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
56 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
57 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
58 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
59 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
60 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
61 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
62 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
63 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
64 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
65 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
66 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
67 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
68 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
69 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
70 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
71 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
72 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
73 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
74 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
75 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
76 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
77 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
78 3300042130 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 Metagenome Rhizosphere
79 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
80 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
81 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
82 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
83 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
84 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
85 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
95 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
96 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
98 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
99 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
100 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified
101 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.76
Metatranscriptomes 0
Isolates 1.24

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.62
Nodule 0
Rhizoplane 0
Rhizosphere 86.34
Stem 0
Stem Tuber 0
Unclassified 7.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265318_10000032 3300028577 Bacteria 143847
2 JGI24744J21845_10010117 3300002077 Bacteria 1934
3 JGI24033J26618_1000185 3300002155 Bacteria 7507
4 rootH1_10152099 3300003316 Bacteria 1765
5 rootH2_10000452 3300003320 Bacteria 89382
6 rootH2_10006850 3300003320 Bacteria 13289
7 rootH2_10019653 3300003320 Bacteria 3801
8 rootL2_10043140 3300003322 Bacteria 6029
9 rootL2_10153227 3300003322 Bacteria 7000
10 rootL2_10165969 3300003322 Bacteria 2875
11 rootL2_10258236 3300003322 Bacteria 2616
12 rootH1_10007357 3300003323 Bacteria 29215
13 rootH1_10008380 3300003323 Bacteria 9619
14 rootH1_10138008 3300003323 Bacteria 3586
15 Ga0070658_10001582 3300005327 Bacteria 19263
16 Ga0070658_10377658 3300005327 Bacteria 1215
17 Ga0070676_10020666 3300005328 Bacteria 3679
18 Ga0070683_100063289 3300005329 Bacteria 3441
19 Ga0070670_100124774 3300005331 Bacteria 2222
20 Ga0070660_100177640 3300005339 Bacteria 1722
21 Ga0070661_100006285 3300005344 Bacteria 8195
22 Ga0070692_10158646 3300005345 Unclassified 1294
23 Ga0070671_100242797 3300005355 Bacteria 1529
24 Ga0070674_100036482 3300005356 Bacteria 3301
25 Ga0070659_100071577 3300005366 Bacteria 2757
26 Ga0070713_100210713 3300005436 Bacteria 1759
27 Ga0068867_100001438 3300005459 Bacteria 16483
28 Ga0070679_100453070 3300005530 Bacteria 1228
29 Ga0070684_100421754 3300005535 Bacteria 1232
30 Ga0068855_100159302 3300005563 Bacteria 2563
31 Ga0070664_100002834 3300005564 Bacteria 14024
32 Ga0068857_100005232 3300005577 Bacteria 11048
33 Ga0068857_100161826 3300005577 Bacteria 2031
34 Ga0068856_100021257 3300005614 Bacteria 6304
35 Ga0068856_100034306 3300005614 Unclassified 4970
36 Ga0081455_10028610 3300005937 Bacteria 5091
37 Ga0070717_10000148 3300006028 Bacteria 52362
38 Ga0105240_10473245 3300009093 Unclassified 1398
39 Ga0105247_10054367 3300009101 Unclassified 2471
40 Ga0105243_10001388 3300009148 Bacteria 21456
41 Ga0105239_10073893 3300010375 Unclassified 3748
42 Ga0157373_10002286 3300013100 Bacteria 14517
43 Ga0157370_10000663 3300013104 Bacteria 42841
44 Ga0157374_10101330 3300013296 Bacteria 2761
45 Ga0157378_10076795 3300013297 Bacteria 3010
46 Ga0157372_10144050 3300013307 Bacteria 2748
47 Ga0213872_10015820 3300021361 Bacteria 3504
48 Ga0213872_10029466 3300021361 Bacteria 2517
49 Ga0213872_10138000 3300021361 Bacteria 1071
50 Ga0213876_10000717 3300021384 Bacteria 23188
51 Ga0213876_10015725 3300021384 Bacteria 4005
52 Ga0213871_10019024 3300021441 Unclassified 1687
53 Ga0207710_10030361 3300025900 Unclassified 2357
54 Ga0207699_10014438 3300025906 Bacteria 4072
55 Ga0207705_10005523 3300025909 Bacteria 9453
56 Ga0207707_10119221 3300025912 Bacteria 2306
57 Ga0207657_10165401 3300025919 Bacteria 1795
58 Ga0207649_10003125 3300025920 Bacteria 9085
59 Ga0207700_10282981 3300025928 Unclassified 1427
60 Ga0207669_10024883 3300025937 Bacteria 3225
61 Ga0207679_10001153 3300025945 Bacteria 16845
62 Ga0207679_10194352 3300025945 Bacteria 1690
63 Ga0207703_10133206 3300026035 Unclassified 2149
64 Ga0207702_10000210 3300026078 Bacteria 69153
65 Ga0207702_10051150 3300026078 Bacteria 3490
66 Ga0207648_10003830 3300026089 Bacteria 15711
67 Ga0265337_1010769 3300028556 Bacteria 3186
68 Ga0265319_1000040 3300028563 Bacteria 112246
69 Ga0265319_1000446 3300028563 Bacteria 29475
70 Ga0265319_1007799 3300028563 Bacteria 4764
71 Ga0265319_1013558 3300028563 Bacteria 3233
72 Ga0265319_1014032 3300028563 Bacteria 3159
73 Ga0265319_1014120 3300028563 Bacteria 3144
74 Ga0265318_10006871 3300028577 Bacteria 5195
75 Ga0265318_10044327 3300028577 Bacteria 1683
76 Ga0265332_10049851 3300031238 Bacteria 1800
77 Ga0265320_10001019 3300031240 Bacteria 20858
78 Ga0265320_10015861 3300031240 Bacteria 4243
79 Ga0265320_10027757 3300031240 Bacteria 2947
80 Ga0265320_10029082 3300031240 Bacteria 2862
81 Ga0265331_10012564 3300031250 Bacteria 4579
82 Ga0265316_10031488 3300031344 Bacteria 4337
83 Ga0265316_10169241 3300031344 Bacteria 1631
84 Ga0307408_100000058 3300031548 Bacteria 135057
85 Ga0265313_10004153 3300031595 Bacteria 11251
86 Ga0265313_10020313 3300031595 Bacteria 3667
87 Ga0265313_10024802 3300031595 Bacteria 3193
88 Ga0307508_10000100 3300031616 Bacteria 102032
89 Ga0265314_10002497 3300031711 Bacteria 18780
90 Ga0265314_10003079 3300031711 Bacteria 16442
91 Ga0265314_10009548 3300031711 Bacteria 8174
92 Ga0265314_10065055 3300031711 Bacteria 2465
93 Ga0307406_10000296 3300031901 Bacteria 29344
94 Ga0307407_10000095 3300031903 Bacteria 29851
95 Ga0307412_10000071 3300031911 Bacteria 106188
96 Ga0307416_100000222 3300032002 Bacteria 30040
97 Ga0307416_100175335 3300032002 Bacteria 2002
98 Ga0307414_10000034 3300032004 Bacteria 177560
99 Ga0373937_0077991 3300036401 Bacteria 3061
100 Ga0395899_0000067 3300037312 Bacteria 202348
101 Ga0395898_0000067 3300037466 Bacteria 255955
102 Ga0395905_0000018 3300037471 Bacteria 369321
103 Ga0436364_0890001 3300037853 Bacteria 7116
104 Ga0436365_0125219 3300039437 Bacteria 8689
105 Ga0436365_0185377 3300039437 Bacteria 1973
106 Ga0436365_0328255 3300039437 Bacteria 67874
107 Ga0436360_0741691 3300039438 Bacteria 4270
108 Ga0436360_1073385 3300039438 Bacteria 1643
109 Ga0436361_0269484 3300039447 Bacteria 7720
110 Ga0436361_0289624 3300039447 Bacteria 7461
111 Ga0436361_0586157 3300039447 Bacteria 4865
112 Ga0436361_0904391 3300039447 Bacteria 1408
113 Ga0436361_0976635 3300039447 Unclassified 4788
114 Ga0436361_1186458 3300039447 Bacteria 2547
115 Ga0436362_0297370 3300039453 Unclassified 1007
116 Ga0436362_1212413 3300039453 Bacteria 3194
117 Ga0439453_0016665 3300041408 Bacteria 1284
118 Ga0450890_000023 3300042127 Bacteria 43592
119 Ga0450892_000134 3300042130 Bacteria 8500
120 Ga0450893_0001069 3300042532 Bacteria 4118
121 Ga0466964_0128674 3300044706 Bacteria 1150
122 Ga0453684_0000287 3300044712 Bacteria 216926
123 Ga0453684_0012580 3300044712 Bacteria 13927
124 Ga0453684_0408832 3300044712 Bacteria 1518
125 Ga0466971_0000009 3300044719 Bacteria 106790
126 Ga0451576_0001604 3300045051 Bacteria 38019
127 Ga0451576_0002361 3300045051 Bacteria 28450
128 Ga0451576_0100428 3300045051 Bacteria 3009
129 Ga0496117_0207578 3300048920 Bacteria 1101
130 Ga0501031_0002590 3300049568 Bacteria 11528
131 Ga0501032_0001708 3300049569 Bacteria 17361
132 Ga0501032_0005579 3300049569 Bacteria 9331
133 Ga0501032_0167730 3300049569 Bacteria 1440
134 Ga0501033_0000006 3300049570 Bacteria 348953
135 Ga0501033_0000122 3300049570 Bacteria 75161
136 Ga0501036_0077172 3300049572 Bacteria 2819
137 Ga0501037_0000020 3300049573 Bacteria 155468
138 Ga0501037_0426418 3300049573 Bacteria 907
139 Ga0501038_0000225 3300049574 Bacteria 47939
140 Ga0501038_0443581 3300049574 Bacteria 999
141 Ga0501043_0000064 3300049579 Bacteria 93899
142 Ga0501043_0000514 3300049579 Bacteria 34829
143 Ga0501046_0004753 3300049580 Bacteria 12253
144 Ga0501046_0014728 3300049580 Bacteria 6582
145 Ga0501047_0001245 3300049581 Bacteria 25234
146 Ga0501047_0002643 3300049581 Bacteria 17049
147 Ga0501047_0297506 3300049581 Unclassified 1457
148 Ga0501070_0001804 3300049586 Bacteria 18885
149 Ga0501070_0265564 3300049586 Bacteria 1402
150 Ga0501070_0376423 3300049586 Bacteria 1150
151 Ga0501083_0017575 3300049744 Bacteria 4985
152 Ga0501035_0000216 3300049822 Bacteria 69506
153 Ga0501035_0006229 3300049822 Bacteria 11217
154 Ga0501035_0007482 3300049822 Bacteria 10202
155 Ga0501044_0000226 3300049823 Bacteria 71150
156 Ga0501044_0000510 3300049823 Bacteria 47224
157 Ga0501044_0027465 3300049823 Bacteria 6015
158 Ga0500604_0000906 3300053151 Bacteria 8205
159 Ga0466962_0000623 3300061719 Bacteria 15713
160 2787508080 2786546548 Bacteria 4745694
161 2788437321 2786546940 Bacteria 6396474
162 Ga0265318_10000032
163 JGI24744J21845_10010117
164 JGI24033J26618_1000185
165 rootH1_10152099
166 rootH2_10000452
167 rootH2_10006850
168 rootH2_10019653
169 rootL2_10043140
170 rootL2_10153227
171 rootL2_10165969
172 rootL2_10258236
173 rootH1_10007357
174 rootH1_10008380
175 rootH1_10138008
176 Ga0070658_10001582
177 Ga0070658_10377658
178 Ga0070676_10020666
179 Ga0070683_100063289
180 Ga0070670_100124774
181 Ga0070660_100177640
182 Ga0070661_100006285
183 Ga0070692_10158646
184 Ga0070671_100242797
185 Ga0070674_100036482
186 Ga0070659_100071577
187 Ga0070713_100210713
188 Ga0068867_100001438
189 Ga0070679_100453070
190 Ga0070684_100421754
191 Ga0068855_100159302
192 Ga0070664_100002834
193 Ga0068857_100005232
194 Ga0068857_100161826
195 Ga0068856_100021257
196 Ga0068856_100034306
197 Ga0081455_10028610
198 Ga0070717_10000148
199 Ga0105240_10473245
200 Ga0105247_10054367
201 Ga0105243_10001388
202 Ga0105239_10073893
203 Ga0157373_10002286
204 Ga0157370_10000663
205 Ga0157374_10101330
206 Ga0157378_10076795
207 Ga0157372_10144050
208 Ga0213872_10015820
209 Ga0213872_10029466
210 Ga0213872_10138000
211 Ga0213876_10000717
212 Ga0213876_10015725
213 Ga0213871_10019024
214 Ga0207710_10030361
215 Ga0207699_10014438
216 Ga0207705_10005523
217 Ga0207707_10119221
218 Ga0207657_10165401
219 Ga0207649_10003125
220 Ga0207700_10282981
221 Ga0207669_10024883
222 Ga0207679_10001153
223 Ga0207679_10194352
224 Ga0207703_10133206
225 Ga0207702_10000210
226 Ga0207702_10051150
227 Ga0207648_10003830
228 Ga0265337_1010769
229 Ga0265319_1000040
230 Ga0265319_1000446
231 Ga0265319_1007799
232 Ga0265319_1013558
233 Ga0265319_1014032
234 Ga0265319_1014120
235 Ga0265318_10006871
236 Ga0265318_10044327
237 Ga0265332_10049851
238 Ga0265320_10001019
239 Ga0265320_10015861
240 Ga0265320_10027757
241 Ga0265320_10029082
242 Ga0265331_10012564
243 Ga0265316_10031488
244 Ga0265316_10169241
245 Ga0307408_100000058
246 Ga0265313_10004153
247 Ga0265313_10020313
248 Ga0265313_10024802
249 Ga0307508_10000100
250 Ga0265314_10002497
251 Ga0265314_10003079
252 Ga0265314_10009548
253 Ga0265314_10065055
254 Ga0307406_10000296
255 Ga0307407_10000095
256 Ga0307412_10000071
257 Ga0307416_100000222
258 Ga0307416_100175335
259 Ga0307414_10000034
260 Ga0373937_0077991
261 Ga0395899_0000067
262 Ga0395898_0000067
263 Ga0395905_0000018
264 Ga0436364_0890001
265 Ga0436365_0125219
266 Ga0436365_0185377
267 Ga0436365_0328255
268 Ga0436360_0741691
269 Ga0436360_1073385
270 Ga0436361_0269484
271 Ga0436361_0289624
272 Ga0436361_0586157
273 Ga0436361_0904391
274 Ga0436361_0976635
275 Ga0436361_1186458
276 Ga0436362_0297370
277 Ga0436362_1212413
278 Ga0439453_0016665
279 Ga0450890_000023
280 Ga0450892_000134
281 Ga0450893_0001069
282 Ga0466964_0128674
283 Ga0453684_0000287
284 Ga0453684_0012580
285 Ga0453684_0408832
286 Ga0466971_0000009
287 Ga0451576_0001604
288 Ga0451576_0002361
289 Ga0451576_0100428
290 Ga0496117_0207578
291 Ga0501031_0002590
292 Ga0501032_0001708
293 Ga0501032_0005579
294 Ga0501032_0167730
295 Ga0501033_0000006
296 Ga0501033_0000122
297 Ga0501036_0077172
298 Ga0501037_0000020
299 Ga0501037_0426418
300 Ga0501038_0000225
301 Ga0501038_0443581
302 Ga0501043_0000064
303 Ga0501043_0000514
304 Ga0501046_0004753
305 Ga0501046_0014728
306 Ga0501047_0001245
307 Ga0501047_0002643
308 Ga0501047_0297506
309 Ga0501070_0001804
310 Ga0501070_0265564
311 Ga0501070_0376423
312 Ga0501083_0017575
313 Ga0501035_0000216
314 Ga0501035_0006229
315 Ga0501035_0007482
316 Ga0501044_0000226
317 Ga0501044_0000510
318 Ga0501044_0027465
319 Ga0500604_0000906
320 Ga0466962_0000623
321 2787508080
322 2788437321

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00248

Aldo_ket_red

Aldo/keto reductase family

51

333

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
7svq-assembly2.cif.gz_B crystal structure of l-galactose dehydrogenase from spinacia oleracea in complex with nad+ 0.9678 2 310
7ezl-assembly1.cif.gz_A rice l-galactose dehydrogenase (holo form) 0.9658 1 310
7svq-assembly2.cif.gz_B crystal structure of l-galactose dehydrogenase from spinacia oleracea in complex with nad+ 0.9467 2 310
7lh6-assembly1.cif.gz_A the structure of bacteroides plebeius l-galactose dehydrogenase 0.9395 1 307
7ezl-assembly1.cif.gz_A rice l-galactose dehydrogenase (holo form) 0.9389 1 310
ID Description Score Start End Superfamily
af_Q2QQV2_1_312_3.20.20.100 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.9753 1 309 3.20.20.100
af_Q2QQV2_1_312_3.20.20.100 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.963 1 309 3.20.20.100
af_Q20127_83_403_3.20.20.100 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.9496 1 305 3.20.20.100
af_Q9VGF2_1_211_3.20.20.100 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.9397 1 190 3.20.20.100
af_Q9VGF3_22_325_3.20.20.100 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.9248 1 303 3.20.20.100
ID Description Score Start End GO Terms
AF-A0A1J3CA68-F1-model_v4 L-galactose dehydrogenase 0.9958 150 262 GO:0005829
GO:0010349
GO:0019853
AF-A0A540VG59-F1-model_v4 Aldo/keto reductase 0.9925 1 313 GO:0005829
GO:0010349
AF-A0A3M1JE61-F1-model_v4 Aldo/keto reductase 0.9913 1 313 GO:0005829
GO:0010349
AF-A0A1J3I4H7-F1-model_v4 L-galactose dehydrogenase 0.9912 150 298 GO:0005829
GO:0010349
GO:0019853
AF-A0A3D1IRJ4-F1-model_v4 Aldo/keto reductase 0.9863 1 313 GO:0005829
GO:0010349

Map