F237331

General Info

Members Datasets Scaffolds Average Seq Length
161 90 322 454

Family's Representative Sequence

Representative Sequence 3300031727|Ga0316576_10062260|Ga0316576_100622601
Length 457
Sequence MAFDIINPTTGTKIDSFEEMPPAQVQEILEKAAAAQRAWVQTPFAERARLMRAAAAVLRANKQDYARRMVEEMGKIHAQGVAEVEKCAWACDYYAEHAEAFLAPEEVATEAAHSFVTYRPLGVVLAIMPWNFPLWQVFRFAVPALMAGNGALLKHAPNVFGCSLLIERIFREAGFPEHLFRSLIIDIPQTTAVIHNPLVAAVTITSSVRAGRAVAGEAGKALKKCVLELGGSDPFIVLEDADIDRAVETGIVSRFQNSGQSCIAAKRFIVVDAVYEEFERKFVDAVKELKTGDPMKDGVYVGPLARVDLRDGLHDQVQRSVAAGARLLTGGELPDALGAFYPPTVLAGVREGMAAWSEELFGPVATLIRVRDEAEALAVANGTEFGLGGAVWTRDLARGERIAAEGIESGAAFVNDMSKSDPRMPFGGIRSSGYGRELSVYGIREFVNVHAVWVSGD

Samples

Sample ID Description Type Environment
1 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
2 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
3 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
4 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
12 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
13 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
14 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
15 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
16 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
17 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
18 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
19 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
20 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
21 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
22 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
25 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
26 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
27 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
28 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
29 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
30 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
31 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
39 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
41 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
42 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
43 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
44 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
45 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
46 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
47 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
48 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
49 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
50 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
51 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
52 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
53 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
54 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
55 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
56 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
57 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
58 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
59 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
60 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
61 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
62 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
63 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
64 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
65 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
66 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
72 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
73 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
74 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
75 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
76 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
77 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
79 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
80 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
81 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
82 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
83 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
84 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
85 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
86 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
87 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
88 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
89 2919509842 Flavobacterium arsenatis 3773 Isolate Unclassified
90 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.27
Metatranscriptomes 1.24
Isolates 2.48

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.07
Nodule 0
Rhizoplane 0
Rhizosphere 88.82
Stem 0
Stem Tuber 0
Unclassified 1.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316576_10062260 3300031727 Bacteria 2736
2 Ga0055536_1016821 3300003781 Bacteria 2425
3 Ga0055536_1016900 3300003781 Bacteria 2414
4 Ga0055530_10002049 3300003791 Bacteria 13576
5 Ga0055531_10022226 3300003794 Bacteria 2425
6 Ga0055531_10022340 3300003794 Bacteria 2414
7 Ga0065715_10103193 3300005293 Bacteria 3051
8 Ga0070682_100098705 3300005337 Bacteria 1924
9 Ga0070714_100212150 3300005435 Bacteria 1775
10 Ga0070706_100005052 3300005467 Bacteria 12609
11 Ga0070706_100128985 3300005467 Bacteria 2359
12 Ga0070698_100010633 3300005471 Bacteria 9807
13 Ga0070698_100029634 3300005471 Bacteria 5682
14 Ga0070698_100123544 3300005471 Bacteria 2546
15 Ga0070699_100014773 3300005518 Bacteria 6715
16 Ga0070699_100017060 3300005518 Bacteria 6235
17 Ga0070699_100221376 3300005518 Bacteria 1686
18 Ga0070697_100039219 3300005536 Bacteria 3829
19 Ga0070697_100095654 3300005536 Bacteria 2463
20 Ga0068864_100000859 3300005618 Bacteria 25585
21 Ga0081540_1027304 3300005983 Bacteria 3238
22 Ga0070716_100005549 3300006173 Bacteria 6120
23 Ga0070716_100017900 3300006173 Bacteria 3683
24 Ga0075428_100023679 3300006844 Bacteria 6796
25 Ga0075431_100022909 3300006847 Bacteria 6384
26 Ga0075431_100030227 3300006847 Bacteria 5580
27 Ga0075433_10005678 3300006852 Bacteria 9807
28 Ga0075433_10010477 3300006852 Bacteria 7442
29 Ga0075433_10040389 3300006852 Bacteria 4038
30 Ga0075433_10054603 3300006852 Bacteria 3485
31 Ga0075433_10135311 3300006852 Bacteria 2190
32 Ga0075433_10229162 3300006852 Bacteria 1650
33 Ga0075433_10235884 3300006852 Bacteria 1624
34 Ga0075434_100022561 3300006871 Bacteria 6130
35 Ga0075434_100034483 3300006871 Bacteria 4997
36 Ga0075434_100053558 3300006871 Bacteria 4009
37 Ga0075429_100025467 3300006880 Bacteria 5134
38 Ga0075429_100026657 3300006880 Bacteria 5019
39 Ga0075436_100068321 3300006914 Bacteria 2455
40 Ga0075435_100011567 3300007076 Bacteria 6500
41 Ga0075435_100013069 3300007076 Bacteria 6167
42 Ga0075435_100053840 3300007076 Bacteria 3246
43 Ga0075435_100092266 3300007076 Bacteria 2500
44 Ga0075435_100092627 3300007076 Bacteria 2496
45 Ga0075435_100170707 3300007076 Bacteria 1835
46 Ga0075435_100195170 3300007076 Bacteria 1714
47 Ga0111539_10000526 3300009094 Bacteria 48478
48 Ga0114129_10000506 3300009147 Bacteria 47580
49 Ga0114129_10011456 3300009147 Bacteria 12627
50 Ga0114129_10037427 3300009147 Bacteria 6849
51 Ga0114129_10098514 3300009147 Bacteria 4046
52 Ga0105242_10240173 3300009176 Bacteria 1628
53 Ga0157378_10037285 3300013297 Bacteria 4305
54 Ga0206350_11075976 3300020080 Bacteria 1459
55 Ga0224572_1010596 3300024225 Bacteria 1737
56 Ga0209676_1000079 3300025292 Bacteria 290447
57 Ga0209676_1001090 3300025292 Bacteria 30462
58 Ga0209050_1000153 3300025298 Bacteria 160851
59 Ga0209256_1008497 3300025299 Bacteria 4745
60 Ga0209051_1002551 3300025303 Bacteria 12865
61 Ga0209257_1000081 3300025304 Bacteria 306577
62 Ga0209257_1002043 3300025304 Bacteria 21497
63 Ga0207699_10000015 3300025906 Bacteria 251707
64 Ga0207684_10002891 3300025910 Bacteria 17014
65 Ga0207684_10083852 3300025910 Bacteria 2714
66 Ga0207684_10098182 3300025910 Bacteria 2501
67 Ga0207652_10143210 3300025921 Bacteria 2138
68 Ga0207700_10131079 3300025928 Bacteria 2047
69 Ga0207665_10002259 3300025939 Bacteria 13001
70 Ga0207665_10038057 3300025939 Bacteria 3202
71 Ga0207428_10000121 3300027907 Bacteria 106184
72 Ga0268266_10000217 3300028379 Bacteria 100718
73 Ga0265327_10000915 3300031251 Bacteria 43244
74 Ga0265327_10002118 3300031251 Bacteria 21959
75 Ga0265316_10000264 3300031344 Bacteria 59436
76 Ga0307513_10137529 3300031456 Bacteria 2376
77 Ga0316575_10000866 3300031665 Bacteria 9296
78 Ga0316575_10006686 3300031665 Bacteria 4160
79 Ga0316579_10001545 3300031691 Bacteria 8397
80 Ga0316579_10008152 3300031691 Bacteria 4357
81 Ga0316579_10037031 3300031691 Bacteria 2252
82 Ga0265314_10009527 3300031711 Bacteria 8185
83 Ga0265342_10016327 3300031712 Bacteria 4858
84 Ga0316576_10101754 3300031727 Bacteria 2148
85 Ga0316578_10012164 3300031728 Bacteria 4531
86 Ga0316578_10015308 3300031728 Bacteria 4121
87 Ga0316578_10051849 3300031728 Bacteria 2403
88 Ga0307414_10037211 3300032004 Bacteria 3256
89 Ga0316583_10000883 3300032133 Bacteria 9586
90 Ga0316583_10003624 3300032133 Bacteria 5454
91 Ga0316583_10006612 3300032133 Bacteria 4170
92 Ga0316583_10009042 3300032133 Bacteria 3592
93 Ga0316583_10016623 3300032133 Bacteria 2647
94 Ga0316585_10001539 3300032137 Bacteria 6109
95 Ga0316585_10032424 3300032137 Bacteria 1646
96 Ga0316593_10012376 3300032168 Bacteria 2503
97 Ga0373939_0011387 3300035114 Bacteria 2243
98 Ga0316574_0009747 3300035398 Bacteria 5396
99 Ga0373927_0000005 3300035695 Bacteria 221415
100 Ga0316582_0006660 3300036647 Bacteria 6091
101 Ga0316582_0006746 3300036647 Bacteria 6060
102 Ga0316582_0011695 3300036647 Bacteria 4864
103 Ga0316582_0012248 3300036647 Bacteria 4778
104 Ga0316582_0014326 3300036647 Bacteria 4496
105 Ga0316582_0079822 3300036647 Bacteria 2134
106 Ga0316584_0008191 3300036712 Bacteria 7189
107 Ga0316584_0010576 3300036712 Bacteria 6455
108 Ga0316584_0022066 3300036712 Bacteria 4639
109 Ga0316584_0024180 3300036712 Bacteria 4445
110 Ga0316584_0031371 3300036712 Bacteria 3929
111 Ga0316584_0055010 3300036712 Bacteria 2980
112 Ga0316584_0162231 3300036712 Bacteria 1660
113 Ga0316581_0004392 3300037588 Bacteria 3595
114 Ga0400487_52039 3300039110 Bacteria 2333
115 Ga0439435_0023379 3300042436 Bacteria 1623
116 Ga0466970_0074300 3300044765 Bacteria 1830
117 Ga0466959_0016354 3300045049 Bacteria 5419
118 Ga0495580_0000422 3300046472 Bacteria 35107
119 Ga0495628_0058669 3300046516 Bacteria 3023
120 Ga0496126_0238942 3300048929 Bacteria 1519
121 Ga0501034_0067084 3300049571 Unclassified 3602
122 Ga0501036_0058518 3300049572 Bacteria 3265
123 Ga0501037_0023700 3300049573 Unclassified 4537
124 Ga0501040_0044635 3300049576 Bacteria 3022
125 Ga0501041_0157019 3300049577 Bacteria 1421
126 Ga0501042_0110647 3300049578 Bacteria 1978
127 Ga0501071_0104557 3300049587 Bacteria 2090
128 Ga0501072_0028790 3300049588 Bacteria 4337
129 Ga0501072_0043655 3300049588 Bacteria 3524
130 Ga0501075_0011135 3300049591 Bacteria 6356
131 Ga0501075_0014695 3300049591 Bacteria 5610
132 Ga0501076_0106223 3300049592 Bacteria 2266
133 Ga0501079_0061446 3300049741 Bacteria 2898
134 Ga0501081_0055830 3300049743 Bacteria 2729
135 Ga0501035_0274180 3300049822 Bacteria 1427
136 Ga0501044_0010046 3300049823 Bacteria 10284
137 nmdc:mga06z11_44953_c1 3300050494 Bacteria 2230
138 nmdc:mga05p37_119448_c1 3300050507 Bacteria 3239
139 nmdc:mga05p37_15822_c1 3300050507 Bacteria 9073
140 nmdc:mga05p37_209336_c1 3300050507 Bacteria 2358
141 nmdc:mga05p37_45366_c1 3300050507 Bacteria 5407
142 nmdc:mga06r32_239736_c1 3300050510 Bacteria 1801
143 nmdc:mga06r32_288712_c1 3300050510 Bacteria 1627
144 nmdc:mga08y16_6502_c1 3300050511 Bacteria 12255
145 nmdc:mga0n895_11439_c1 3300050512 Bacteria 7918
146 nmdc:mga0n895_125656_c1 3300050512 Bacteria 2589
147 nmdc:mga0n895_66171_c1 3300050512 Bacteria 3579
148 nmdc:mga0rr50_10786_c1 3300050513 Bacteria 5824
149 nmdc:mga0rr50_86338_c1 3300050513 Bacteria 2434
150 nmdc:mga08x19_113341_c1 3300050514 Bacteria 1810
151 nmdc:mga08x19_2358_c1 3300050514 Bacteria 11455
152 nmdc:mga0a205_113177_c1 3300050515 Bacteria 2613
153 nmdc:mga0a205_137194_c1 3300050515 Bacteria 2347
154 nmdc:mga0a205_137373_c1 3300050515 Bacteria 2345
155 nmdc:mga0a205_15492_c1 3300050515 Bacteria 7126
156 nmdc:mga0a205_216316_c1 3300050515 Bacteria 1803
157 nmdc:mga0a205_47604_c1 3300050515 Bacteria 4138
158 2748016362 2747842501 Bacteria 5293829
159 2919132358 2919130084 Bacteria 5301837
160 2919512039 2919509842 Bacteria 4104664
161 2919692966 2919692658 Bacteria 5943958
162 Ga0316576_10062260
163 Ga0055536_1016821
164 Ga0055536_1016900
165 Ga0055530_10002049
166 Ga0055531_10022226
167 Ga0055531_10022340
168 Ga0065715_10103193
169 Ga0070682_100098705
170 Ga0070714_100212150
171 Ga0070706_100005052
172 Ga0070706_100128985
173 Ga0070698_100010633
174 Ga0070698_100029634
175 Ga0070698_100123544
176 Ga0070699_100014773
177 Ga0070699_100017060
178 Ga0070699_100221376
179 Ga0070697_100039219
180 Ga0070697_100095654
181 Ga0068864_100000859
182 Ga0081540_1027304
183 Ga0070716_100005549
184 Ga0070716_100017900
185 Ga0075428_100023679
186 Ga0075431_100022909
187 Ga0075431_100030227
188 Ga0075433_10005678
189 Ga0075433_10010477
190 Ga0075433_10040389
191 Ga0075433_10054603
192 Ga0075433_10135311
193 Ga0075433_10229162
194 Ga0075433_10235884
195 Ga0075434_100022561
196 Ga0075434_100034483
197 Ga0075434_100053558
198 Ga0075429_100025467
199 Ga0075429_100026657
200 Ga0075436_100068321
201 Ga0075435_100011567
202 Ga0075435_100013069
203 Ga0075435_100053840
204 Ga0075435_100092266
205 Ga0075435_100092627
206 Ga0075435_100170707
207 Ga0075435_100195170
208 Ga0111539_10000526
209 Ga0114129_10000506
210 Ga0114129_10011456
211 Ga0114129_10037427
212 Ga0114129_10098514
213 Ga0105242_10240173
214 Ga0157378_10037285
215 Ga0206350_11075976
216 Ga0224572_1010596
217 Ga0209676_1000079
218 Ga0209676_1001090
219 Ga0209050_1000153
220 Ga0209256_1008497
221 Ga0209051_1002551
222 Ga0209257_1000081
223 Ga0209257_1002043
224 Ga0207699_10000015
225 Ga0207684_10002891
226 Ga0207684_10083852
227 Ga0207684_10098182
228 Ga0207652_10143210
229 Ga0207700_10131079
230 Ga0207665_10002259
231 Ga0207665_10038057
232 Ga0207428_10000121
233 Ga0268266_10000217
234 Ga0265327_10000915
235 Ga0265327_10002118
236 Ga0265316_10000264
237 Ga0307513_10137529
238 Ga0316575_10000866
239 Ga0316575_10006686
240 Ga0316579_10001545
241 Ga0316579_10008152
242 Ga0316579_10037031
243 Ga0265314_10009527
244 Ga0265342_10016327
245 Ga0316576_10101754
246 Ga0316578_10012164
247 Ga0316578_10015308
248 Ga0316578_10051849
249 Ga0307414_10037211
250 Ga0316583_10000883
251 Ga0316583_10003624
252 Ga0316583_10006612
253 Ga0316583_10009042
254 Ga0316583_10016623
255 Ga0316585_10001539
256 Ga0316585_10032424
257 Ga0316593_10012376
258 Ga0373939_0011387
259 Ga0316574_0009747
260 Ga0373927_0000005
261 Ga0316582_0006660
262 Ga0316582_0006746
263 Ga0316582_0011695
264 Ga0316582_0012248
265 Ga0316582_0014326
266 Ga0316582_0079822
267 Ga0316584_0008191
268 Ga0316584_0010576
269 Ga0316584_0022066
270 Ga0316584_0024180
271 Ga0316584_0031371
272 Ga0316584_0055010
273 Ga0316584_0162231
274 Ga0316581_0004392
275 Ga0400487_52039
276 Ga0439435_0023379
277 Ga0466970_0074300
278 Ga0466959_0016354
279 Ga0495580_0000422
280 Ga0495628_0058669
281 Ga0496126_0238942
282 Ga0501034_0067084
283 Ga0501036_0058518
284 Ga0501037_0023700
285 Ga0501040_0044635
286 Ga0501041_0157019
287 Ga0501042_0110647
288 Ga0501071_0104557
289 Ga0501072_0028790
290 Ga0501072_0043655
291 Ga0501075_0011135
292 Ga0501075_0014695
293 Ga0501076_0106223
294 Ga0501079_0061446
295 Ga0501081_0055830
296 Ga0501035_0274180
297 Ga0501044_0010046
298 nmdc:mga06z11_44953_c1
299 nmdc:mga05p37_119448_c1
300 nmdc:mga05p37_15822_c1
301 nmdc:mga05p37_209336_c1
302 nmdc:mga05p37_45366_c1
303 nmdc:mga06r32_239736_c1
304 nmdc:mga06r32_288712_c1
305 nmdc:mga08y16_6502_c1
306 nmdc:mga0n895_11439_c1
307 nmdc:mga0n895_125656_c1
308 nmdc:mga0n895_66171_c1
309 nmdc:mga0rr50_10786_c1
310 nmdc:mga0rr50_86338_c1
311 nmdc:mga08x19_113341_c1
312 nmdc:mga08x19_2358_c1
313 nmdc:mga0a205_113177_c1
314 nmdc:mga0a205_137194_c1
315 nmdc:mga0a205_137373_c1
316 nmdc:mga0a205_15492_c1
317 nmdc:mga0a205_216316_c1
318 nmdc:mga0a205_47604_c1
319 2748016362
320 2919132358
321 2919512039
322 2919692966

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00171

Aldedh

Aldehyde dehydrogenase family

1

452

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
3efv-assembly1.cif.gz_A crystal structure of a putative succinate-semialdehyde dehydrogenase from salmonella typhimurium lt2 with bound nad 0.9896 4 452
3vz0-assembly2.cif.gz_C structural insights into cofactor and substrate selection by gox0499 0.9866 2 454
3vz3-assembly1.cif.gz_B structural insights into substrate and cofactor selection by sp2771 0.9861 4 454
4it9-assembly1.cif.gz_B structure of bacterial enzyme 0.9859 3 454
3vz2-assembly1.cif.gz_A structural insights into substrate and cofactor selection by sp2771 0.9853 3 454
ID Description Score Start End Superfamily
af_P76149_8_455_2.40.10.10 Mainly Beta;Beta Barrel;Thrombin, subunit H;Trypsin-like serine proteases 0.9908 4 449 2.40.10.10
af_P9WNX9_3_238_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9902 3 233 3.40.605.10
af_P9WNX9_1_452_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9898 1 449 3.40.605.10
af_P76149_240_424_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9875 235 418 3.40.309.10
af_P76149_9_239_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9846 3 233 3.40.605.10
ID Description Score Start End GO Terms
AF-A0A4Q3K280-F1-model_v4 deleted 0.9989 1 406
AF-A0A2V7NTN8-F1-model_v4 Succinate-semialdehyde dehydrogenase 0.9944 174 454 GO:0004777
AF-A0A1F8WJH0-F1-model_v4 Succinate-semialdehyde dehydrogenase 0.9938 1 454 GO:0004030
GO:0004777
AF-A0A660Z5C5-F1-model_v4 NAD-dependent succinate-semialdehyde dehydrogenase 0.9934 149 454 GO:0004777
AF-A0A2E9ZAN8-F1-model_v4 Succinate-semialdehyde dehydrogenase 0.9925 3 454 GO:0004030
GO:0004777

Map