F237475

General Info

Members Datasets Scaffolds Average Seq Length
161 101 161 483

Family's Representative Sequence

Representative Sequence 3300037853|Ga0436364_0630398|Ga0436364_0630398_3260_5017
Length 516
Sequence MLAMVASATLVGVEGQSIGVEVHVSTGLPSFSIVGLPDASCRESRDRVRAAILSSGLRWPQKRITVNLAPTGVRKGGAGLDLPIAIALLVADEQLPGPAVEGVAFIGELGLDGSLRPVPGTLALVHALGSRPVVLPEEAAIEARVASATVVRSAVTLDRLAMCLRGQRAWDPLPTPSVDPPRPSGPDLADVRGQPLGRLAVEVAAMVGPPGSGKTMWAERLPTLLPPLETDAALEVARIHSSAGLPLPPGVLVRRPPFRSPHHSASPVSLVGGGGVQMRPGELSCAHHGVLFLDELGEFPSDVLDMLRQPLEGGSVLVCRARASIEFPAQVILVAAMNPCPCGRDRGPGSCRCRDSAKARYATRVSGPLLDRFDLRIFVDPPEVAELERGVEANGLLPARRLDELAAVDAGAAGLLETKLRQGLLSARGLHRIRRVARTIADLAGHEGPVTAEQVYSALALRAPVFGPDQMSGLGEDRRLGEVIRARGGRKRNGGASPVRARFAVGGTPNPAAPGP

Samples

Sample ID Description Type Environment
1 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
2 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
3 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
4 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
5 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
6 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
7 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
8 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
9 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
10 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
11 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
12 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
13 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
14 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
15 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
16 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
17 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
18 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
19 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
21 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
22 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
23 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
24 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
25 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
26 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
27 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
28 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
29 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
38 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
39 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
40 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
41 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
42 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
43 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
44 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
45 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
46 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
47 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
48 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
49 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
50 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
51 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
52 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
53 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
54 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
55 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
56 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
57 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
58 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
59 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
60 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
61 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
62 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
63 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
64 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
69 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
70 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
71 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
75 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
76 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
77 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
78 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
79 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
80 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
81 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
82 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
83 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
84 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
85 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
86 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
87 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
88 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
89 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
90 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
91 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
92 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
93 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
94 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
95 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
96 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
97 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
98 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
99 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
100 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
101 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.7
Nodule 0
Rhizoplane 5.59
Rhizosphere 80.75
Stem 0
Stem Tuber 0
Unclassified 4.97

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070671_100000363 3300005355 Bacteria 31295
2 Ga0070671_100077902 3300005355 Bacteria 2770
3 Ga0070681_10064099 3300005458 Bacteria 3647
4 Ga0068867_100013732 3300005459 Bacteria 5736
5 Ga0070706_100041621 3300005467 Bacteria 4241
6 Ga0068855_100087043 3300005563 Bacteria 3611
7 Ga0068866_10001567 3300005718 Bacteria 9717
8 Ga0068863_100032992 3300005841 Bacteria 4933
9 Ga0068858_100016691 3300005842 Bacteria 6894
10 Ga0068858_100028652 3300005842 Bacteria 5172
11 Ga0068860_100102409 3300005843 Bacteria 2732
12 Ga0081455_10002572 3300005937 Bacteria 21527
13 Ga0081538_10003598 3300005981 Bacteria 14562
14 Ga0075365_10020433 3300006038 Bacteria 4105
15 Ga0075365_10040311 3300006038 Bacteria 3045
16 Ga0075365_10089119 3300006038 Bacteria 2100
17 Ga0075364_10002711 3300006051 Bacteria 9949
18 Ga0075364_10017114 3300006051 Bacteria 4523
19 Ga0075364_10045726 3300006051 Bacteria 2849
20 Ga0075362_10047986 3300006177 Bacteria 1904
21 Ga0075428_100029250 3300006844 Bacteria 6096
22 Ga0075428_100083101 3300006844 Bacteria 3494
23 Ga0075430_100000815 3300006846 Bacteria 24283
24 Ga0075430_100065994 3300006846 Bacteria 3039
25 Ga0075431_100013667 3300006847 Bacteria 8205
26 Ga0075429_100002652 3300006880 Bacteria 15050
27 Ga0111539_10005767 3300009094 Bacteria 16004
28 Ga0111539_10169975 3300009094 Bacteria 2547
29 Ga0105245_10001567 3300009098 Bacteria 20740
30 Ga0105245_10130093 3300009098 Bacteria 2360
31 Ga0105243_10006919 3300009148 Bacteria 8740
32 Ga0105242_10005178 3300009176 Bacteria 10063
33 Ga0157369_10145870 3300013105 Bacteria 2503
34 Ga0157378_10012466 3300013297 Bacteria 7444
35 Ga0157375_10037025 3300013308 Bacteria 4671
36 Ga0163163_10033574 3300014325 Bacteria 4965
37 Ga0157379_10007210 3300014968 Bacteria 9616
38 Ga0213876_10002211 3300021384 Bacteria 11487
39 Ga0207642_10001316 3300025899 Bacteria 7676
40 Ga0207687_10001537 3300025927 Bacteria 15843
41 Ga0207644_10078572 3300025931 Bacteria 2432
42 Ga0207686_10012022 3300025934 Bacteria 4753
43 Ga0207667_10034190 3300025949 Bacteria 5460
44 Ga0207703_10014245 3300026035 Bacteria 6202
45 Ga0207703_10020384 3300026035 Bacteria 5185
46 Ga0207703_10057316 3300026035 Bacteria 3176
47 Ga0207639_10048680 3300026041 Bacteria 3210
48 Ga0207648_10010172 3300026089 Bacteria 8946
49 Ga0316576_10017088 3300031727 Bacteria 4921
50 Ga0316576_10029713 3300031727 Bacteria 3866
51 Ga0316576_10030868 3300031727 Bacteria 3798
52 Ga0316576_10056779 3300031727 Bacteria 2860
53 Ga0307413_10079155 3300031824 Bacteria 2100
54 Ga0307410_10006781 3300031852 Bacteria 6212
55 Ga0373928_0000438 3300035084 Bacteria 8288
56 Ga0373932_0001798 3300035112 Bacteria 5778
57 Ga0316574_0063500 3300035398 Bacteria 2323
58 Ga0373931_0000001 3300035691 Bacteria 634029
59 Ga0373931_0000078 3300035691 Bacteria 44806
60 Ga0316584_0004869 3300036712 Bacteria 8932
61 Ga0316584_0018964 3300036712 Bacteria 4970
62 Ga0436364_0630398 3300037853 Bacteria 5437
63 Ga0400485_04085 3300038735 Bacteria 10125
64 Ga0400483_116707 3300039062 Bacteria 51248
65 Ga0400483_193515 3300039062 Bacteria 56248
66 Ga0400483_211615 3300039062 Bacteria 4876
67 Ga0400483_223853 3300039062 Bacteria 9906
68 Ga0436365_0061287 3300039437 Bacteria 19683
69 Ga0436362_0246667 3300039453 Bacteria 3504
70 Ga0436362_1132514 3300039453 Bacteria 8929
71 Ga0436362_1287763 3300039453 Bacteria 8712
72 Ga0495653_0032228 3300046463 Bacteria 4163
73 Ga0495674_0074906 3300047319 Bacteria 2914
74 Ga0495680_0038895 3300047322 Bacteria 3799
75 Ga0496101_0005944 3300048904 Bacteria 7818
76 Ga0496104_0002991 3300048907 Bacteria 14571
77 Ga0496105_0003191 3300048908 Bacteria 12071
78 Ga0496109_0036011 3300048912 Bacteria 4467
79 Ga0496110_0004154 3300048913 Bacteria 11188
80 Ga0496110_0164920 3300048913 Bacteria 2009
81 Ga0496111_0008437 3300048914 Bacteria 6822
82 Ga0496111_0026079 3300048914 Bacteria 4125
83 Ga0496114_0014417 3300048917 Bacteria 6345
84 Ga0501031_0076930 3300049568 Bacteria 2174
85 Ga0501033_0000906 3300049570 Bacteria 27059
86 Ga0501034_0000602 3300049571 Bacteria 56640
87 Ga0501034_0000814 3300049571 Bacteria 46426
88 Ga0501034_0005138 3300049571 Bacteria 14362
89 Ga0501034_0017495 3300049571 Bacteria 7352
90 Ga0501034_0037605 3300049571 Bacteria 4902
91 Ga0501036_0006751 3300049572 Bacteria 9329
92 Ga0501036_0092425 3300049572 Bacteria 2556
93 Ga0501036_0122654 3300049572 Bacteria 2195
94 Ga0501037_0044931 3300049573 Bacteria 3243
95 Ga0501038_0053933 3300049574 Bacteria 3459
96 Ga0501038_0055651 3300049574 Bacteria 3398
97 Ga0501039_0008642 3300049575 Bacteria 7759
98 Ga0501039_0035098 3300049575 Bacteria 3871
99 Ga0501040_0016958 3300049576 Bacteria 4829
100 Ga0501040_0023092 3300049576 Bacteria 4169
101 Ga0501041_0037090 3300049577 Bacteria 2953
102 Ga0501041_0103207 3300049577 Bacteria 1766
103 Ga0501041_0120662 3300049577 Bacteria 1629
104 Ga0501042_0049709 3300049578 Bacteria 2992
105 Ga0501042_0140703 3300049578 Bacteria 1740
106 Ga0501043_0024432 3300049579 Bacteria 4742
107 Ga0501046_0013090 3300049580 Bacteria 7042
108 Ga0501047_0029597 3300049581 Bacteria 5280
109 Ga0501048_0059806 3300049582 Bacteria 2700
110 Ga0501048_0061682 3300049582 Bacteria 2655
111 Ga0501068_0027555 3300049584 Bacteria 3355
112 Ga0501068_0095018 3300049584 Bacteria 1843
113 Ga0501069_0000103 3300049585 Bacteria 39330
114 Ga0501070_0000001 3300049586 Bacteria 519187
115 Ga0501070_0011556 3300049586 Bacteria 7453
116 Ga0501071_0009672 3300049587 Bacteria 6435
117 Ga0501071_0065574 3300049587 Bacteria 2637
118 Ga0501071_0138780 3300049587 Bacteria 1810
119 Ga0501072_0026268 3300049588 Bacteria 4539
120 Ga0501072_0112896 3300049588 Bacteria 2163
121 Ga0501073_0008715 3300049589 Bacteria 7509
122 Ga0501073_0009988 3300049589 Bacteria 6982
123 Ga0501074_0002626 3300049590 Bacteria 12582
124 Ga0501075_0008180 3300049591 Bacteria 7283
125 Ga0501075_0042463 3300049591 Bacteria 3410
126 Ga0501076_0010195 3300049592 Bacteria 6963
127 Ga0501076_0055155 3300049592 Bacteria 3151
128 Ga0501076_0083001 3300049592 Bacteria 2573
129 Ga0501076_0099954 3300049592 Bacteria 2337
130 Ga0501076_0139025 3300049592 Bacteria 1973
131 Ga0501077_0009675 3300049593 Bacteria 5992
132 Ga0501077_0104748 3300049593 Bacteria 1793
133 Ga0501079_0051732 3300049741 Bacteria 3172
134 Ga0501080_0001710 3300049742 Bacteria 18740
135 Ga0501080_0029984 3300049742 Bacteria 5065
136 Ga0501080_0086060 3300049742 Bacteria 2920
137 Ga0501083_0002602 3300049744 Bacteria 12427
138 Ga0501083_0076688 3300049744 Bacteria 2218
139 Ga0501045_0000557 3300049824 Bacteria 23429
140 Ga0501045_0003409 3300049824 Bacteria 10874
141 Ga0501045_0047705 3300049824 Bacteria 3121
142 nmdc:mga00v17_17501_c1 3300050491 Bacteria 4059
143 nmdc:mga0yw44_10059_c1 3300050492 Bacteria 4814
144 nmdc:mga0yw44_31341_c1 3300050492 Bacteria 2684
145 nmdc:mga0yw44_8280_c1 3300050492 Bacteria 5168
146 nmdc:mga05p37_295433_c1 3300050507 Bacteria 1927
147 nmdc:mga09592_2750_c1 3300050508 Bacteria 14214
148 nmdc:mga0qj67_389_c1 3300050509 Bacteria 30374
149 nmdc:mga06r32_1907_c1 3300050510 Bacteria 18577
150 nmdc:mga08y16_34924_c1 3300050511 Bacteria 4310
151 Ga0495601_0045841 3300053077 Bacteria 2751
152 Ga0495619_0033107 3300053085 Bacteria 3356
153 Ga0500568_0000013 3300053139 Bacteria 224760
154 Ga0500616_0000634 3300053153 Bacteria 42575
155 Ga0500616_0015445 3300053153 Bacteria 4366
156 Ga0501084_0016150 3300054114 Bacteria 6199
157 Ga0501084_0042442 3300054114 Bacteria 3805
158 Ga0501082_0025979 3300060353 Bacteria 5047
159 Ga0501082_0032281 3300060353 Bacteria 4516
160 Ga0501082_0050308 3300060353 Bacteria 3594
161 Ga0530510_0155932 3300061734 Bacteria 1687

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049586 Ga0501070_0011556 Ga0501070_0011556_189_1721 420
2 3300039062 Ga0400483_223853 Ga0400483_223853_6352_8031 426
3 3300009098 Ga0105245_10001567 Ga0105245_100015675 428
4 3300025927 Ga0207687_10001537 Ga0207687_1000153715 428
5 3300031824 Ga0307413_10079155 Ga0307413_100791552 429
6 3300031852 Ga0307410_10006781 Ga0307410_100067812 429
7 3300031727 Ga0316576_10030868 Ga0316576_100308687 431
8 3300031727 Ga0316576_10029713 Ga0316576_100297133 435
9 3300036712 Ga0316584_0018964 Ga0316584_0018964_1449_2951 435
10 3300031727 Ga0316576_10056779 Ga0316576_100567792 438
11 3300035398 Ga0316574_0063500 Ga0316574_0063500_697_2226 438
12 3300039062 Ga0400483_116707 Ga0400483_116707_16980_18503 439
13 3300039062 Ga0400483_193515 Ga0400483_193515_32656_34179 439
14 3300049585 Ga0501069_0000103 Ga0501069_0000103_1921_3432 439
15 3300049586 Ga0501070_0000001 Ga0501070_0000001_323587_325098 439
16 3300049571 Ga0501034_0017495 Ga0501034_0017495_2573_4087 441
17 3300053153 Ga0500616_0015445 Ga0500616_0015445_559_2067 441
18 3300039453 Ga0436362_0246667 Ga0436362_0246667_1691_3190 442
19 3300037853 Ga0436364_0630398 Ga0436364_0630398_3260_5017 446
20 3300009094 Ga0111539_10169975 Ga0111539_101699752 447
21 3300005937 Ga0081455_10002572 Ga0081455_1000257219 449
22 3300021384 Ga0213876_10002211 Ga0213876_100022119 450
23 3300039437 Ga0436365_0061287 Ga0436365_0061287_14728_16245 450
24 3300049741 Ga0501079_0051732 Ga0501079_0051732_1268_2779 450
25 3300049575 Ga0501039_0008642 Ga0501039_0008642_5677_7191 451
26 3300049587 Ga0501071_0138780 Ga0501071_0138780_253_1764 451
27 3300049824 Ga0501045_0047705 Ga0501045_0047705_1527_3038 451
28 3300005981 Ga0081538_10003598 Ga0081538_1000359810 452
29 3300049572 Ga0501036_0006751 Ga0501036_0006751_3262_4776 452
30 3300049574 Ga0501038_0055651 Ga0501038_0055651_709_2223 452
31 3300049576 Ga0501040_0016958 Ga0501040_0016958_503_2017 452
32 3300049579 Ga0501043_0024432 Ga0501043_0024432_512_2026 452
33 3300049580 Ga0501046_0013090 Ga0501046_0013090_2439_3953 452
34 3300049584 Ga0501068_0095018 Ga0501068_0095018_254_1768 452
35 3300049587 Ga0501071_0009672 Ga0501071_0009672_1143_2657 452
36 3300049591 Ga0501075_0008180 Ga0501075_0008180_5248_6762 452
37 3300049592 Ga0501076_0010195 Ga0501076_0010195_3007_4521 452
38 3300049593 Ga0501077_0009675 Ga0501077_0009675_3356_4870 452
39 3300049824 Ga0501045_0000557 Ga0501045_0000557_564_2078 452
40 3300053085 Ga0495619_0033107 Ga0495619_0033107_10_1521 452
41 3300060353 Ga0501082_0025979 Ga0501082_0025979_3488_5002 452
42 3300049576 Ga0501040_0023092 Ga0501040_0023092_1944_3479 453
43 3300049592 Ga0501076_0139025 Ga0501076_0139025_44_1579 453
44 3300061734 Ga0530510_0155932 Ga0530510_0155932_40_1575 453
45 3300038735 Ga0400485_04085 Ga0400485_04085_4004_5518 456
46 3300048912 Ga0496109_0036011 Ga0496109_0036011_1380_2870 457
47 3300049577 Ga0501041_0120662 Ga0501041_0120662_45_1556 457
48 3300049592 Ga0501076_0055155 Ga0501076_0055155_1481_2992 457
49 3300054114 Ga0501084_0042442 Ga0501084_0042442_932_2443 457
50 3300060353 Ga0501082_0032281 Ga0501082_0032281_2924_4435 457
51 3300005355 Ga0070671_100077902 Ga0070671_1000779022 458
52 3300005843 Ga0068860_100102409 Ga0068860_1001024093 458
53 3300006844 Ga0075428_100083101 Ga0075428_1000831012 458
54 3300049574 Ga0501038_0053933 Ga0501038_0053933_652_2169 458
55 3300049575 Ga0501039_0035098 Ga0501039_0035098_172_1683 458
56 3300049578 Ga0501042_0049709 Ga0501042_0049709_297_1808 458
57 3300049582 Ga0501048_0059806 Ga0501048_0059806_48_1559 458
58 3300049587 Ga0501071_0065574 Ga0501071_0065574_975_2486 458
59 3300049592 Ga0501076_0099954 Ga0501076_0099954_101_1612 458
60 3300006177 Ga0075362_10047986 Ga0075362_100479861 460
61 3300009094 Ga0111539_10005767 Ga0111539_100057676 460
62 3300009098 Ga0105245_10130093 Ga0105245_101300932 460
63 3300050511 nmdc:mga08y16_34924_c1 nmdc:mga08y16_34924_c1_2656_4170 460
64 3300039453 Ga0436362_1287763 Ga0436362_1287763_1376_2878 461
65 3300053139 Ga0500568_0000013 Ga0500568_0000013_202535_204049 461
66 3300046463 Ga0495653_0032228 Ga0495653_0032228_1023_2489 462
67 3300047322 Ga0495680_0038895 Ga0495680_0038895_1334_2800 462
68 3300049581 Ga0501047_0029597 Ga0501047_0029597_3555_5066 462
69 3300053077 Ga0495601_0045841 Ga0495601_0045841_500_1966 462
70 3300005458 Ga0070681_10064099 Ga0070681_100640993 463
71 3300013105 Ga0157369_10145870 Ga0157369_101458702 463
72 3300026041 Ga0207639_10048680 Ga0207639_100486802 463
73 3300039453 Ga0436362_1132514 Ga0436362_1132514_3962_5476 463
74 3300053153 Ga0500616_0000634 Ga0500616_0000634_440_1975 463
75 3300005841 Ga0068863_100032992 Ga0068863_1000329924 464
76 3300005842 Ga0068858_100016691 Ga0068858_1000166913 464
77 3300006038 Ga0075365_10089119 Ga0075365_100891192 464
78 3300006846 Ga0075430_100000815 Ga0075430_10000081515 464
79 3300006847 Ga0075431_100013667 Ga0075431_1000136677 464
80 3300006880 Ga0075429_100002652 Ga0075429_10000265210 464
81 3300014325 Ga0163163_10033574 Ga0163163_100335745 464
82 3300026035 Ga0207703_10014245 Ga0207703_100142456 464
83 3300035691 Ga0373931_0000078 Ga0373931_0000078_37211_38722 464
84 3300036712 Ga0316584_0004869 Ga0316584_0004869_4706_6235 464
85 3300048913 Ga0496110_0004154 Ga0496110_0004154_684_2195 464
86 3300048914 Ga0496111_0008437 Ga0496111_0008437_5154_6665 464
87 3300049570 Ga0501033_0000906 Ga0501033_0000906_10914_12425 464
88 3300049571 Ga0501034_0000602 Ga0501034_0000602_18937_20457 464
89 3300049573 Ga0501037_0044931 Ga0501037_0044931_1046_2566 464
90 3300049584 Ga0501068_0027555 Ga0501068_0027555_989_2509 464
91 3300049588 Ga0501072_0026268 Ga0501072_0026268_1490_3010 464
92 3300049588 Ga0501072_0112896 Ga0501072_0112896_396_1913 464
93 3300049589 Ga0501073_0008715 Ga0501073_0008715_2544_4064 464
94 3300049589 Ga0501073_0009988 Ga0501073_0009988_4304_5824 464
95 3300049590 Ga0501074_0002626 Ga0501074_0002626_4977_6497 464
96 3300049742 Ga0501080_0001710 Ga0501080_0001710_1964_3484 464
97 3300049742 Ga0501080_0029984 Ga0501080_0029984_3208_4728 464
98 3300049744 Ga0501083_0002602 Ga0501083_0002602_1804_3324 464
99 3300049744 Ga0501083_0076688 Ga0501083_0076688_663_2183 464
100 3300050508 nmdc:mga09592_2750_c1 nmdc:mga09592_2750_c1_4393_5922 464
101 3300050509 nmdc:mga0qj67_389_c1 nmdc:mga0qj67_389_c1_21398_22927 464
102 3300050510 nmdc:mga06r32_1907_c1 nmdc:mga06r32_1907_c1_13219_14748 464
103 3300054114 Ga0501084_0016150 Ga0501084_0016150_4018_5538 464
104 3300060353 Ga0501082_0050308 Ga0501082_0050308_208_1728 464
105 3300005459 Ga0068867_100013732 Ga0068867_1000137323 465
106 3300005718 Ga0068866_10001567 Ga0068866_100015678 465
107 3300009148 Ga0105243_10006919 Ga0105243_100069197 465
108 3300009176 Ga0105242_10005178 Ga0105242_100051788 465
109 3300013297 Ga0157378_10012466 Ga0157378_100124663 465
110 3300013308 Ga0157375_10037025 Ga0157375_100370253 465
111 3300014968 Ga0157379_10007210 Ga0157379_100072108 465
112 3300025899 Ga0207642_10001316 Ga0207642_100013166 465
113 3300025934 Ga0207686_10012022 Ga0207686_100120225 465
114 3300026035 Ga0207703_10057316 Ga0207703_100573163 465
115 3300026089 Ga0207648_10010172 Ga0207648_100101723 465
116 3300048904 Ga0496101_0005944 Ga0496101_0005944_1717_3234 465
117 3300048907 Ga0496104_0002991 Ga0496104_0002991_4401_5918 465
118 3300048908 Ga0496105_0003191 Ga0496105_0003191_8030_9547 465
119 3300048914 Ga0496111_0026079 Ga0496111_0026079_990_2507 465
120 3300048917 Ga0496114_0014417 Ga0496114_0014417_1477_2994 465
121 3300049568 Ga0501031_0076930 Ga0501031_0076930_384_1907 465
122 3300049572 Ga0501036_0092425 Ga0501036_0092425_865_2388 465
123 3300049577 Ga0501041_0037090 Ga0501041_0037090_1191_2714 465
124 3300049591 Ga0501075_0042463 Ga0501075_0042463_497_2020 465
125 3300049592 Ga0501076_0083001 Ga0501076_0083001_895_2418 465
126 3300049824 Ga0501045_0003409 Ga0501045_0003409_8314_9837 465
127 3300047319 Ga0495674_0074906 Ga0495674_0074906_959_2473 466
128 3300049572 Ga0501036_0122654 Ga0501036_0122654_412_1929 466
129 3300049582 Ga0501048_0061682 Ga0501048_0061682_50_1567 466
130 3300005563 Ga0068855_100087043 Ga0068855_1000870436 467
131 3300025949 Ga0207667_10034190 Ga0207667_100341902 467
132 3300006051 Ga0075364_10002711 Ga0075364_100027119 468
133 3300048913 Ga0496110_0164920 Ga0496110_0164920_92_1609 468
134 3300050491 nmdc:mga00v17_17501_c1 nmdc:mga00v17_17501_c1_2126_3643 468
135 3300006038 Ga0075365_10020433 Ga0075365_100204335 476
136 3300006051 Ga0075364_10017114 Ga0075364_100171141 476
137 3300006051 Ga0075364_10045726 Ga0075364_100457263 476
138 3300006844 Ga0075428_100029250 Ga0075428_1000292508 476
139 3300006846 Ga0075430_100065994 Ga0075430_1000659942 476
140 3300031727 Ga0316576_10017088 Ga0316576_100170885 476
141 3300049571 Ga0501034_0000814 Ga0501034_0000814_11947_13458 476
142 3300049571 Ga0501034_0005138 Ga0501034_0005138_4654_6189 476
143 3300049571 Ga0501034_0037605 Ga0501034_0037605_1509_3023 476
144 3300049577 Ga0501041_0103207 Ga0501041_0103207_180_1700 476
145 3300049578 Ga0501042_0140703 Ga0501042_0140703_156_1676 476
146 3300049593 Ga0501077_0104748 Ga0501077_0104748_118_1638 476
147 3300049742 Ga0501080_0086060 Ga0501080_0086060_309_1826 476
148 3300050492 nmdc:mga0yw44_10059_c1 nmdc:mga0yw44_10059_c1_3104_4615 476
149 3300050492 nmdc:mga0yw44_31341_c1 nmdc:mga0yw44_31341_c1_184_1695 476
150 3300005355 Ga0070671_100000363 Ga0070671_10000036313 477
151 3300005467 Ga0070706_100041621 Ga0070706_1000416214 477
152 3300005842 Ga0068858_100028652 Ga0068858_1000286521 477
153 3300006038 Ga0075365_10040311 Ga0075365_100403113 477
154 3300025931 Ga0207644_10078572 Ga0207644_100785722 477
155 3300026035 Ga0207703_10020384 Ga0207703_100203841 477
156 3300035084 Ga0373928_0000438 Ga0373928_0000438_6063_7577 477
157 3300035112 Ga0373932_0001798 Ga0373932_0001798_2519_4033 477
158 3300035691 Ga0373931_0000001 Ga0373931_0000001_428113_429627 477
159 3300039062 Ga0400483_211615 Ga0400483_211615_1052_2575 477
160 3300050492 nmdc:mga0yw44_8280_c1 nmdc:mga0yw44_8280_c1_1673_3184 477
161 3300050507 nmdc:mga05p37_295433_c1 nmdc:mga05p37_295433_c1_289_1803 477

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01078

Mg_chelatase

Magnesium chelatase, subunit ChlI

187

387

0.94

PF13335

Mg_chelatase_C

Magnesium chelatase, subunit ChlI C-terminal

354

462

0.91

PF13541

ChlI

Subunit ChlI of Mg-chelatase

20

139

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
6on2-assembly1.cif.gz_D lon protease from yersinia pestis with y2853 substrate 0.8697 4 164
4ypm-assembly1.cif.gz_A crystal structure of a lona protease domain in complex with bortezomib 0.8678 2 164
5e7s-assembly2.cif.gz_L-3 hexameric structure of a lona protease domain in active state 0.8653 4 164
6on2-assembly1.cif.gz_F lon protease from yersinia pestis with y2853 substrate 0.8611 4 164
7ypk-assembly1.cif.gz_B close-ring hexamer of the substrate-bound lon protease with an s678a mutation 0.8592 4 164
ID Description Score Start End Superfamily
af_P9WPR1_2_172_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9601 1 167 3.30.230.10
af_P9WPR1_187_501_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9429 174 467 3.40.50.300
af_P22787_171_500_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9408 174 467 3.40.50.300
af_P9WPR1_2_172_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.933 1 167 3.30.230.10
af_P22787_5_170_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9296 5 166 3.30.230.10
ID Description Score Start End GO Terms
AF-A0A645IBZ5-F1-model_v4 Competence protein ComM 0.9898 1 119
AF-A0A7V9DVC6-F1-model_v4 ATP-binding protein 0.9896 2 100 GO:0005524
AF-A0A661ENS3-F1-model_v4 ATP-dependent protease 0.9895 2 124
AF-A0A3N0IMA2-F1-model_v4 Magnesium chelatase 0.9891 2 91
AF-A0A831XP99-F1-model_v4 ATP-dependent protease 0.989 1 125 GO:0006508
GO:0008233

Feature Viewer

pLDDT pTM Quality
84.71 0.63 Medium
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Predicted Structure (AlphaFold2)

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